<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Hora (2016) Characterization of near full-length genome sequences for standard panels of HIV-2 isolates established at the External Quality Assurance Program Oversight Laboratory (EQAPOL) Unpublished 1.4e-105 3         Unpublished

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AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
KX174312DE20107NG002Nigeria2007genomic RNAinitially isolated (AB499694) from a person fromNigeria. It was then propogated in PBMCs and was used toestablish the global viral diversity panel for ExternalQuality Assurance Program Oversight Laboratory (EQAPOL).Ref: Umeki-Sakamoto,Y, et al. J Acquir Immune Defic Syndr2010;54:241_247;subtype: HIV-2 CRF01_AB22312P,5Q,6V,7A,9N,10Y,13V,14P,15L,26L,31K,33G,34A,36I,37V,39G,41Q,47C,50Y,52I,54Q,58C,61E,68V,69I,70R,72I,79D,82Q,83Q,86I,87X,88X,91L,92P,93A,96L,98D,111V,112E,116Q,119Y,120R,121G,122Q,122Q_N,123S,124V,128N,131R,135Q,139Q,141C,146N,149N,153V,154K,162Q,163S,171S,178D,179T,180A,182R,183A,200L,201V,204G,208H,209P,215L,221I,226Q,230L,231M
KX174313DE20108JP005Japan2008genomic RNAinitially isolated (AB499695) from a person fromJapan. It was then propogated in PBMCs and was used toestablish the global viral diversity panel for ExternalQuality Assurance Program Oversight Laboratory (EQAPOL).Ref: Umeki-Sakamoto,Y, et al. J Acquir Immune Defic Syndr2010;54:241_247;subtype: HIV-2 CRF01_AB22312P,5Q,6V,7A,9N,10Y,13V,14P,15L,26L,31K,33G,34A,36I,37V,39G,41Q,47C,50Y,52I,54Q,58C,61E,68V,69I,70R,72I,79D,82Q,83Q,86I,87X,88X,91L,92P,93A,96L,98D,111V,112E,116Q,119Y,120R,121G,122Q,122Q_N,123S,124V,128N,131R,135Q,139Q,141C,146N,149N,153V,154K,162Q,163S,171S,177T,178D,180A,182R,183A,191I,200L,201V,204G,208H,209P,215L,221I,226Q,230L,231M
KX174311DE20189CI001Cote d'Ivoire1989genomic RNAinitially isolated (L36874) from a person from Coted Ivoire, propogated in PBMCs and was used to establishthe global viral diversity panel for External QualityAssurance Program Oversight Laboratory (EQAPOL). Ref: Gao,F. et al J Virol 68:7433_7447, 1994.subtype: HIV-2 CRF01_AB22312P,5Q,6V,7A,9N,10Y,13V,14P,15L,26L,31K,33G,34A,37V,39G,41Q,47C,50Y,52I,54Q,58C,61E,68V,69I,70R,72I,79D,82Q,83Q,87X,88X,91L,92P,93A,96L,98D,111V,112E,116Q,119Y,119Y_G,120S,121Q,122S,128N,131R,135Q,139Q,141C,146N,149N,153V,154K,162Q,163S,171S,178D,179T,180A,182R,183A,200L,201V,204G,208H,209P,215L,221I,226Q,230L,231M

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