<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Capoferri (2020) Recombination analysis of near full-length HIV-1 sequences and the identification of a potential new Circulating Recombinant Form from Rakai, Uganda AIDS Res. Hum. Retroviruses (2020) In press 2.04e-154 274 275 Naive Plasma Direct PCR; NGS Molecular epidemiology

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AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
MN650370A021565R15Uganda16-Jul-2012genomic DNA12316A,12Y,15L,27I,33N,54M,58V,75D,83A,87Q,92P,96L,110S,111V,115V,120G,128D,131R,148V,177C,178T,200S,225S
MN650371A035039R15Uganda17-Aug-2011genomic DNA12316L,27I,83L,91V,116Q,120S,148V,180D,225S
MN694970A051598Uganda16-Jan-2014genomic DNA12316A,33N,41T,54M,58I,71D,83T,91V,92P,120S,124V,135V,148V,169F,178T,180D,187D,203R,208G,225S
MN650372A065779R15Uganda22-Sep-2011genomic DNA12316H,11I,14P,27I,41I,50H,54S,71D,83L,96V,110N,120S,148V,154K,180D,225S
MN650373A066651R15Uganda28-Sep-2011genomic DNA12316L,15L,27I,41T,50S,54S,83L,87P,91V,98D,116A,120H,148V,208G,225S
MN694971A094422Uganda02-Sep-2013genomic DNA12316L,15L,27I,83L,120G,148V,178T,180D,183Q,225S
MN694972A095192Uganda02-Sep-2013genomic DNA12316A,14S,15L,27I,29D,50G,54M,58I,71D,83L,92P,111P,120S,128D,131R,148V,154K,169F,178T,183G,200S,203R,207A,208G
MN650374A106840R15Uganda30-Nov-2012genomic DNA12316L,27I,41T,83L,87Q,91V,96L,116Q,120S,148V,180D,200N,225S
MN650375A107764R15Uganda18-Apr-2012genomic DNA12316L,15L,27I,33N,41T,54S,83L,87P,91V,96L,98D,116Q,120G,148V,154K,180D,225S
MN650376A109502R16Uganda12-Sep-2013genomic DNA12316A,14T,15L,27I,54M,58V,71D,83L,86A,91V,92Q,111P,116A,120G,123A,128D,148V,154K,169F,178T,180D,200S,207T,208G
MN650377A109798R15Uganda23-Aug-2012genomic DNA12316A,11I,14P,15F,27I,29D,31G,33N,50S,54M,58V,71D,92P,110S,111T,120S,128D,148V,154K,169F,178T,179P,200S,207T,208G,210S,225S
MN650378A110039R16Uganda16-Sep-2013genomic DNA12316L,27I,41T,75D,83I,87Q,91V,96I,116Q,148V,180D,200S,205LM,208G
MN650379A110055R15Uganda06-Sep-2012genomic DNA12316A,10P,14S,15L,27I,54M,58I,71D,83M,91V,111P,116A,120G,128D,148V,154K,169F,183G,187D,191I,200S,203R,208G
MN650380A110071R15Uganda06-Sep-2012genomic DNA12316L,27I,31G,33N,41A,79D,83Q,91N,96L,120S,128D,148V,154K,177C,180D,199R,225S
MN650381A110209R15Uganda11-Oct-2012genomic DNA12316L,14S,27I,83L,91A,120S,148V,178ST,201L,203KR,208G,225S
MN650382A110885R15Uganda13-Dec-2012genomic DNA12316L,27I,83L,86A,87Q,91F,92P,93A,98D,116N,120G,148V,154K,180D
MN650383A110974R15Uganda11-Jan-2013genomic DNA12316L,15L,27I,71D,83L,86A,87Q,110N,120S,148V,154K,177G,180D,208G,225S
MN650384A111597R15Uganda07-Mar-2013genomic DNA12313L,6A,11T,12Y,14P,15L,27I,31G,33N,54M,58V,71D,83L,87Q,92P,111P,116AG,120G,123AP,131R,148V,154KR,163E,169F,178T,200S,207T,208G
MN650385A112372R15Uganda02-Apr-2013genomic DNA12316L,15L,27I,41T,83L,86A,87Q,91V,96I,116T,148V,180D,208G
MN694973A115327Uganda16-Jan-2014genomic DNA12316L,14S,27I,83L,120S,148V,171C,180D,194S
MN694974A115393Uganda24-Nov-2014genomic DNA12316L,16T,27I,41T,116A,120S,124V,148V,154K,180D,225S
MN650386A187912R15Uganda14-Sep-2011genomic DNA12312V,6A,14N,15L,27I,54M,58I,71D,83T,111V,115M,116A,120S,128D,148V,154K,169F,171V,178T,183G,191I,208G
MN650387B035145R16Uganda17-Jul-2013genomic DNA12316A,11T,14P,15L,27I,30R,31G,48I,54M,58I,71D,83L,92P,111P,120G,126I,128D,148V,154K,169F,178T,183G,191I,200S,203R,207S,208G,210S
MN650388B035551R15Uganda28-Sep-2011genomic DNA12316L,14P,15L,27I,36I,41M,83I,91M,93A,120S,146C,148V,154K,180D,207T,208G
MN650389B045253R15Uganda27-Sep-2011genomic DNA12316A,11I,13S,14P,15L,27I,30R,31G,54M,58I,71D,83L,87Q,92P,111P,120G,128D,129L,148V,154K,169F,178T,183G,200S,203R,207S,208G
MN650390B049821R15Uganda07-Oct-2011genomic DNA12316L,15V,27I,41T,54S,59I,71D,91V,116N,120G,124V,148V,154K,169F,178T,187D,203R,208G,210S,225S
MN650391B064848R15Uganda05-Jul-2012genomic DNA12316A,14N,15L,27I,54M,58I,71D,83L,92P,111P,120S,128D,148V,154K,169F,178T,180D,200S,203R,208G,210S,225S
MN650392B066335R15Uganda22-Aug-2011genomic DNA12316L,11I,14P,50S,58A,83LQ,87HR,91V,95A,98D,120S,123AP,124V,128D,148V,180D
MN650393B069437R15Uganda26-Sep-2011genomic DNA12316A,11I,14N,15L,27I,45D,50H,54M,58I,71D,83L,92P,111P,120S,128D,148V,154K,169F,171V,178T,183G,204S,207T,208G,225S
MN694975B077943Uganda18-Nov-2013genomic DNA12316A,11I,14N,15L,27I,31G,33N,54M,58I,71D,83L,91V,96L,111P,116A,120H,128D,148V,169F,171V,178T,180D,200S,203R,207T,208G,225S
MN694976B091884Uganda14-Aug-2013genomic DNA12316L,14N,27I,41T,71D,83L,120S,139T,148V,154K,180D,183T,208G
MN650394B103359R15Uganda12-Sep-2011genomic DNA12316L,14V,15L,27I,30R,36I,41M,83L,91IV,110N,120S,124V,148V,154K,180D,225S
MN650395B105985R16Uganda13-Sep-2013genomic DNA12316L,11I,14S,15L,27I,41T,50V,83L,87Q,91V,116A,120S,124V,148V,180D,187D,208G,210S
MN650396B108419R15Uganda16-May-2012genomic DNA12316A,9A,11I,15L,30R,31G,54M,58I,71D,83L,86I,92P,111I,120S,128D,148V,154K,169F,178T,183G,200S,203R,208G
MN650397B108540R15Uganda10-May-2012genomic DNA12316A,9H,11I,14N,15L,27I,31G,50G,54M,58I,71D,83L,92P,110N,111T,115L,116Q,120S,124V,128D,148V,149G,154K,169F,180D,200S,203R,207T,208G
MN650398B109383R16Uganda03-Oct-2013genomic DNA12316L,14S,27I,116A,120S,148V,154K,177G,208G,225S
MN650399B109838R15Uganda24-Aug-2012genomic DNA12316A,11I,14S,15V,27I,31G,58I,71D,83L,92P,111T,115V,120S,128D,148V,154K,169F,171A,177C,178T,183G,203R,204G,207S,208G,225S
MN650400B110064R15Uganda05-Sep-2012genomic DNA12316L,27I,41T,83L,116A,124V,148V,180D,208G,210S,225S
MN650401B110276R15Uganda26-Nov-2012genomic DNA12316L,27I,83L,91Q,94N,116A,120S,148V,180D,225S
MN650402B110284R15Uganda26-Nov-2012genomic DNA12316L,27I,83L,91Q,94N,116A,120S,148V,180D,225S
MN650403B110941R15Uganda09-Jan-2013genomic DNA12316A,10P,11I,14T,15L,27I,54M,58I,71D,83L,91V,111T,116A,120G,128D,148V,154K,169F,178T,180D,200AS,203R,204G,207S,208G,210S
MN650404B110975R15Uganda07-Jan-2013genomic DNA12316L,71D,83L,148V,154K,177G,180D,210S
MN650405B111572R15Uganda21-Feb-2013genomic DNA12316L,15L,27I,41T,83L,91A,148V,154K,178T,200N,208G,225S
MN650406B112488R15Uganda12-Apr-2013genomic DNA12316L,27I,83L,91V,116Q,120S,148V,180D,230I
MN694977B115336Uganda18-Feb-2014genomic DNA12316A,11I,13S,14P,15L,27I,30R,31G,48I,54M,58I,71D,79D,83L,92P,111P,120G,123S,148V,154K,169F,171C,180D,183G,200S,203R,207S,208G,210S,225S
MN650407C020384R15Uganda20-Jul-2012genomic DNA12316L,27I,83L,86A,87Q,91Y,92P,93A,116A,120G,123A,148V,180D,207A,208G
MN650408C027169R15Uganda13-Oct-2011genomic DNA12316A,11I,15M,16T,27I,54M,58I,71D,79D,111I,116A,120S,148V,154K,169F,178T,183G,191I,200H,207T,208G
MN650409C027339R15Uganda23-Sep-2011genomic DNA12316A,11I,12Y,15L,27I,48G,54M,58V,71D,83L,91V,111P,116A,120G,128D,139H,148V,154K,169F,171C,178T,180D,191I,203R,207S,208G
MN650410C045068R15Uganda25-Aug-2011genomic DNA12316A,14P,15L,27I,30R,31G,54M,58I,71D,91V,92P,111I,120G,128D,148V,154K,169F,178T,183G,200S,203R,207S,208G
MN650411C045157R15Uganda07-Jan-2013genomic DNA12316L,15L,27I,41V,45D,54S,83L,87Q,120S,124V,148V,180D,183T,225S,230I
MN694978C049644Uganda10-Feb-2015genomic DNA12316A,11I,15L,27I,30R,54M,58I,71D,96L,111T,116A,118I,120G,131R,148V,154K,169F,180D,183G,187D,191I,200S,203R,208G,225S
MN694979C078575Uganda14-Feb-2014genomic DNA12316A,15L,27I,33N,54M,58V,71D,83L,92P,111P,120G,128D,148V,154K,169F,178T,180D,187D,200A,207T,208G
MN694980C090220Uganda30-Aug-2013genomic DNA12316L,14P,27I,41T,83L,96V,135V,148V,154K,171V,180D,212W,213K,214K
MN694981C094814Uganda30-Aug-2013genomic DNA12316L,27I,41T,83L,87P,91V,96I,98D,110N,116Q,120S,148V,180D
MN650412C094848R15Uganda05-Sep-2012genomic DNA12316M,15V,27I,44A,50S,54V,58I,79D,83L,91Q,120S,148V,170R,180D,230I
MN650413C105106R15Uganda23-Aug-2012genomic DNA12316L,27I,41T,83L,91N,116A,120S,148V,180D,199R,208G,225S
MN650414C107326R15Uganda26-Mar-2012genomic DNA12312V,6A,11I,14N,15F,27I,54M,58I,71D,83T,91V,96I,111I,115M,116A,120S,128D,148V,154K,169F,171V,180D,183H,191I,200S,207T,208G,225S
MN650415C107350R15Uganda28-Mar-2012genomic DNA12316L,27I,31G,33N,41T,83L,87Q,91A,120S,148V,154K,178ST,180D,203R,225S
MN650416C107465R15Uganda03-Apr-2012genomic DNA12316V,15L,27I,30R,41I,75D,83L,91A,118I,120G,124V,135V,148V,154K,180D
MN650417C108127R15Uganda04-May-2012genomic DNA12316P,14N,15M,27I,41T,50S,54S,58V,71D,91A,96L,116A,120H,128D,148V,169F,180D,203R,208G,210S
MN650418C108703R15Uganda18-May-2012genomic DNA12316L,14S,15L,27I,29D,41T,91V,116A,120S,128D,148V,154K,180D,225S
MN650419C108761R15Uganda21-May-2012genomic DNA12312IV,3IV,6L,27I,41T,50G,59I,71D,83L,91Q,96L,116A,135V,148V,178T
MN650420C109821R15Uganda23-Aug-2012genomic DNA12316L,27I,41T,83L,87P,91V,96I,116Q,120S,148V,180D,183HN,203R,208G
MN650421C110007R15Uganda07-Sep-2012genomic DNA12316L,14S,15L,27I,33N,83L,120S,148V,180D,207Q,208G,225S
MN650422C110950R15Uganda15-Jan-2013genomic DNA12316A,11I,14S,15L,27I,41T,71D,83L,87Q,91V,96I,98D,116A,148V,154K,169F,178T,180D,187D,203R,208G,225S
MN650423C111557R15Uganda20-Feb-2013genomic DNA12316L,15L,27I,83L,91V,116A,148V,180D,225S,226Y
MN650424C111612R15Uganda12-Mar-2013genomic DNA12316A,14T,15L,27I,54M,58I,71D,83L,87HQ,92P,96IM,111P,116GR,120S,128D,148V,154K,169F,178T,180D,200S,207A,208G
MN650425C114447R16Uganda19-Sep-2013genomic DNA12316L,14N,15L,27I,41T,68I,72V,83L,91V,116A,120S,128D,148V,154K,177G,180D,208G,210N,225S
MN650426C114471R16Uganda26-Sep-2013genomic DNA12316L,14HNPT,15ILM,27IV,31AG,33KNRS,41A,83L,91A,120S,124V,148V,180D,225S
MN650427C114756R16Uganda27-Sep-2013genomic DNA12316A,11I,12Y,13N,15L,54M,58V,71D,83L,87Q,92P,96I,98D,111P,116V,120A,131R,148V,154K,169F,171C,178T,183G,200S,203R,207S,208G
MN650428C114942R16Uganda10-Oct-2013genomic DNA12312V,6A,11T,15L,26A,30R,31G,54M,58I,59I,71D,79D,92P,111I,120S,148V,153V,154K,169F,171V,178T,183G,200S,203R,208G,210S,225S
MN694982C115329Uganda17-Jan-2014genomic DNA12316L,27I,83L,87Q,91V,98D,120S,148V,180D,225S
MN650429D013874R15Uganda22-Oct-2012genomic DNA12316A,11M,15L,26A,27I,30R,31G,50G,54M,58I,71D,83L,87Q,92P,96L,111P,120S,128D,148V,169F,178T,183GS,200S,203R,207S,208G
MN694983D026571Uganda19-Feb-2014genomic DNA12316L,9R,15L,27I,50S,54S,83L,87Q,92P,96L,116D,120H,148V,178T,183Q,225A
MN650430D050392R16Uganda25-Oct-2013genomic DNA12316L,27I,83L,91N,116A,120S,138F,148V,180D,225S
MN650431D054716R15Uganda03-Jul-2012genomic DNA12316A,14V,15M,27I,36I,50S,54M,58I,71D,83L,87Q,92P,96I,110N,116T,118I,128D,131R,148V,154K,169F,178T,180D,187D,203R,208G
MN650432D062816R15Uganda05-Oct-2012genomic DNA12316L,27I,29D,41T,83L,87Q,91V,96I,98D,116T,120S,148V,180D,208G,225S
MN650433D066337R16Uganda17-Jul-2013genomic DNA12316L,27I,83L,148V,178T
MN694984D072128Uganda20-Feb-2014genomic DNA12316L,12Y,15L,27I,41T,71D,83L,91N,92P,111P,115M,116A,120S,148V,180D
MN694985D083914Uganda26-May-2015genomic DNA12316L,15L,50T,79D,83L,116A,120S,148V,180D,210S
MN694986D094302Uganda27-Jan-2014genomic DNA12316L,15L,27I,83L,116A,148V,225S
MN694987D094742Uganda26-Aug-2013genomic DNA12316V,11I,14P,15L,26A,27I,30R,31G,54M,58I,71D,83L,92P,111M,120S,128D,148V,154K,169F,171A,178T,183G,200S,207S,208G,225S
MN694988D095501Uganda20-Sep-2013genomic DNA12316A,11I,14G,15V,31G,54M,58I,71D,111I,116A,120G,128D,148V,154K,169F,178T,183G,191I,200S,207T,208G
MN650434D095569R15Uganda23-Aug-2012genomic DNA12316L,14S,15L,27I,83L,116A,120S,148V,180D,208AEPQ,210ST,225S
MN650435D104526R15Uganda29-Aug-2012genomic DNA12316A,9H,11I,14G,15V,26A,27I,30R,31G,54M,58I,71D,83L,87Q,96I,111P,115V,116A,128D,148V,154K,169F,171V,180D,183G,200S,203R,207S,208G,210S
MN650436D107034R15Uganda05-Dec-2012genomic DNA12316L,31G,33N,41A,50S,54S,78GV,83L,100T,120S,141V,148V,154K,160S,180D,208H,225S
MN650437D107301R15Uganda29-Mar-2012genomic DNA12316L,27I,31G,33N,41T,71D,83T,91V,115V,116A,120S,128D,148V,154K,169F,178T,187D,200N,203R,208G,225S
MN650438D107343R15Uganda18-May-2012genomic DNA12316A,15V,27I,31G,33N,54M,58I,71D,83L,111I,116A,120G,128D,148V,154K,169F,178T,183G,191I,200S,203R,207T,208G
MN650439D107898R15Uganda20-Apr-2012genomic DNA12316L,14P,16T,27I,50N,59I,83L,87Q,91V,111I,120S,128D,148V,154K,178T,187D,225S,230L,231M
MN650440D107937R15Uganda18-Dec-2012genomic DNA12316L,14T,15L,27I,41T,50G,71D,83T,87Q,91V,96I,116T,120S,148V,154K,169F,178T,187D,200A,203R,208G,210S
MN650441D108534R15Uganda10-May-2012genomic DNA12316A,12Y,14S,15L,16A,27I,54M,58V,71D,83T,91V,92P,96L,111P,120G,128D,146C,148V,154K,160PS,169F,178T,187D,191T,208G,225S
MN650442D108576R15Uganda11-May-2012genomic DNA12316L,27I,41T,47C,83L,87Q,91H,92P,110S,120S,135V,148V,154K,178T,203R
MN650443D108673R15Uganda17-May-2012genomic DNA12316A,11I,12Y,14V,15M,27I,54M,58I,71D,83M,111P,115V,116A,120S,128D,148V,153V,154K,169F,171I,178T,183G,200S,207T,208G,225S
MN650444D108746R15Uganda18-May-2012genomic DNA12316L,27I,83L,91V,98D,120S,148V,180D,208G
MN650445D108958R15Uganda30-May-2012genomic DNA12316A,11I,12Y,15L,27I,30R,31G,48L,54M,58I,71D,83L,86T,91V,92Q,111P,120G,128D,148V,154K,169F,178T,180D,200S,203R,207S,208G,210S
MN650446D109474R15Uganda08-Aug-2012genomic DNA12313L,6A,11I,15L,27I,30R,31G,48I,54M,58I,71D,83L,92P,111P,118I,128D,148V,154K,169F,178T,180D,187D,191I,200S,203R,208G,225A,226HY
MN650447D109474R16Uganda23-Sep-2013genomic DNA12313L,6A,11I,15L,27I,30R,31G,48I,54M,58I,71D,83L,92P,111P,118I,128D,148V,154K,169F,178T,180D,187D,191I,200S,203R,208G,225A
MN650448D109539R16Uganda19-Sep-2013genomic DNA12316L,14N,15L,41T,50S,54S,59I,71D,83L,87Q,91V,96I,110S,116A,148V,169F,178T,210S,225S
MN650449D110105R15Uganda05-Sep-2012genomic DNA12316A,11T,12Y,14S,15L,27I,29D,31G,33N,52M,54M,58V,71D,83L,87P,88V,91L,92P,96L,111P,115V,120G,128D,148V,154K,169F,171V,180D,187D,200S,207T,208G,210S
MN650450D110210R15Uganda11-Oct-2012genomic DNA12316L,15L,27I,41T,50S,83T,91T,110N,120S,128D,148V,180D
MN650451D110236R15Uganda15-Oct-2012genomic DNA12316A,14P,15M,27I,41T,54M,58I,71D,87Q,92P,96I,110N,116R,120S,128D,148V,169F,178T,200S,203R,208G,225S
MN650452D110749R15Uganda18-Mar-2013genomic DNA12316L,27I,41T,79D,83T,116A,120S,148V,178ST,180DE,199R,208G,225S
MN650453D114846R16Uganda30-Sep-2013genomic DNA12316A,14N,15L,27I,50S,54M,58I,71D,83T,91A,92P,111P,120S,128D,148V,154K,169F,178T,180D,187D,203R,204G,207A,208G
MN650454D114854R16Uganda04-Oct-2013genomic DNA12316A,11T,14S,15L,27I,41T,54M,58I,78G,83A,116A,120S,148V,180D,210S,225S
MN694989D115388Uganda24-Oct-2014genomic DNA12316L,41T,47C,50S,54S,59I,71D,83T,86A,87Q,91V,96L,98D,120S,148V,180D,207T,208G,210P,225S
MN694990D115419Uganda27-May-2015genomic DNA12316L,15L,27I,41T,71D,83L,91T,120S,148V,154K,180D
MN650455D184342R17Uganda12-Aug-2015genomic DNA12316A,12P,15L,27I,30R,31G,54M,58I,71D,83L,87Q,92P,96L,111P,118I,139T,148V,154K,169F,178T,179A,183G,200S,207S,208G
MN650456E010870R15Uganda02-Apr-2013genomic DNA12316A,10P,14S,15L,27I,54M,58I,83L,111P,116A,120G,128D,148V,154K,169F,171V,178T,180D,191I,208AS,210ST
MN650457E035300R15Uganda20-Sep-2011genomic DNA12316L,15V,27I,41T,54S,59I,83L,116Q,120S,148V,154K,225S
MN650458E055916R17Uganda24-Aug-2015genomic DNA12316L,27I,41T,83L,91V,120S,148V,154K,178T,180D,203R
MN650459E064883R15Uganda27-Jun-2012genomic DNA12316A,11AV,15L,27I,30R,31G,54M,58I,71D,83L,87Q,91N,92P,96L,111V,120G,128D,148V,154K,169F,178T,183H,200S,203R,208G
MN694991E065113Uganda19-Sep-2013genomic DNA12316A,11T,14S,15L,27I,31G,41T,49S,58V,59I,71D,83L,92P,111I,120G,128D,148V,154K,160S,169F,178T,183G,200S,203R,208G,210S,225S
MN650460E066207R17Uganda03-Aug-2015genomic DNA12316L,10P,14P,15L,27I,29D,54L,79D,83T,91V,116A,120S,148V,180D
MN650461E095382R15Uganda21-Aug-2012genomic DNA12316IL,10L,14P,15L,31G,33K,54S,71D,83T,87Q,91V,96I,115V,116A,128D,142I,148V,154K,169F,178T,180D,187D,203R,208G,225S
MN694992E096303Uganda08-Oct-2013genomic DNA12316L,15L,27I,41T,83L,87P,91V,98D,120S,148V,160S,180D,208G,210S
MN650462E103378R15Uganda15-Sep-2011genomic DNA12316L,14P,27M,30R,33K,44A,58S,83L,87Q,91V,96I,110N,116T,148V,178T,203R,208G,225S
MN650463E107417R15Uganda29-Mar-2012genomic DNA12316A,11I,14G,15V,27I,30R,31G,48I,54M,58I,71D,83L,92P,111P,128D,148V,154K,169F,178T,183G,191AITV,200S,203R,208G,210S
MN650464E107653R16Uganda23-Apr-2014genomic DNA12316L,27I,33N,36I,41T,83L,87Q,91V,115V,132K,148V,178T,183Q,187D
MN650465E107700R15Uganda18-Apr-2012genomic DNA12316L,15L,27I,41V,45D,54S,83L,120S,148V,154K,183T,225S
MN650466E108349R15Uganda07-May-2012genomic DNA12316L,15L,27I,83L,116A,148V,180D,208G,225S
MN650467E109938R15Uganda19-Sep-2012genomic DNA12316A,11I,14P,15L,27I,31G,33N,54M,58I,71D,83L,91V,96L,111T,116A,128D,148V,154K,169F,171V,178T,183G,187DE,200S,203R,207T,208G,225GS
MN650468E110067R15Uganda05-Sep-2012genomic DNA12316L,15V,27I,41T,54S,71D,83L,87Q,96I,116T,120S,148V,154K,169F,178T,180D,187D,203R,208G,225S
MN650469E110229R15Uganda13-Oct-2012genomic DNA12316P,14S,15M,27I,41T,50S,54S,58V,71D,91V,96L,110N,116A,120H,128D,139H,148V,169F,178T,180D,203R,208G,210S,225S
MN650470E110237R15Uganda15-Oct-2012genomic DNA12316A,11I,15V,27I,36I,58I,71D,83L,92P,111P,120G,128D,148V,154K,169F,171A,178T,183G,187D,200S,207S,208G,225T
MN650471E110766R15Uganda18-Mar-2013genomic DNA12316L,14P,15L,27I,41T,83L,86A,87Q,91V,98D,120S,148V,180D,194S,208G
MN650472E110863R15Uganda14-Dec-2012genomic DNA12316L,14P,15L,27I,41T,83L,87Q,91V,110N,116A,120S,148V,180D
MN650473E110871R15Uganda17-Dec-2012genomic DNA12316A,11I,13S,14P,15L,27I,30R,31G,47G,54M,58I,71D,83L,87Q,111P,115V,116A,118I,120G,148V,154K,169F,178T,183H,200S,203R,207S,208G
MN650474E110928R15Uganda17-Dec-2012genomic DNA12313L,6A,11I,12Y,15L,26A,27I,30R,31G,54M,58I,71D,79D,83M,87Q,96I,111V,115M,116A,120S,124V,128D,148V,154K,169F,171A,178T,180D,200S,207T,208G
MN650475E110936R15Uganda18-Dec-2012genomic DNA12316A,10W,11T,15V,30R,31G,54M,58I,71D,83IV,92P,96I,111I,115V,120S,128D,148V,154K,169F,180D,183G,200S,203R,207S,208G,225S
MN650476E112499R15Uganda12-Apr-2013genomic DNA12316L,15L,16T,27I,41T,71D,83L,116A,120S,148V,154K,180D
MN694993E115339Uganda21-Feb-2014genomic DNA12316A,27I,83M,110S,116A,120S,148V,183G,207T,208G,225S
MN694994E115397Uganda15-Jan-2015genomic DNA12316L,14P,27I,41T,83L,91V,120S,123A,135V,148V,171V,180D
MN694995E115410Uganda02-Apr-2015genomic DNA12316L,27I,41T,71D,83L,91V,98D,120S,148V,180D,191I,208G,210S,225S
MN650477E117208R16Uganda03-Jul-2014genomic DNA12316A,26A,27I,41T,50S,54M,58I,71D,83L,86I,87Q,96I,111P,116A,135V,148V,169F,187D,200S,203R,208G
MN650478E197383R15Uganda28-Aug-2012genomic DNA12312IV,6L,15L,27I,50G,83L,91V,116A,148V,183S,208G,225S
MN650479F004535R15Uganda07-Sep-2011genomic DNA12316L,27I,41T,83L,120S,148V,154K,178T,199R,225S,230I
MN650480F004535R16Uganda30-Jul-2013genomic DNA12316L,27I,41T,83L,120S,148V,154K,178T,199R,225S,230I
MN650481F010041R15Uganda09-Sep-2011genomic DNA12316L,14S,15L,27I,50A,83L,91A,96L,116A,121T,128D,148V,154K,180D,183T
MN650482F057488R15Uganda15-Jun-2012genomic DNA12316A,11I,15V,27I,44A,54L,58I,71D,83L,92P,111I,120G,128D,148V,154K,169F,170R,171V,178T,183G,200S,203R,207T,208G
MN650483F062012R15Uganda21-Sep-2011genomic DNA12316L,15L,27I,33N,41T,71D,83L,120S,148V,180D,183T,208G,225S
MN650484F069114R15Uganda12-Apr-2013genomic DNA12316A,11T,14N,15L,27I,31G,50H,54M,58I,71D,83L,92P,111P,120S,128D,148V,169F,180D,187A,200S,203R,207A,208G,225S
MN694996F071159Uganda16-Sep-2013genomic DNA12316L,27I,50T,71D,83L,128D,148V,154K,177G,180D,208G
MN650485F087403R15Uganda06-Sep-2012genomic DNA12316L,15L,27I,33N,41T,71D,83L,91V,120S,148V,180D,208G,210S
MN694997F096778Uganda14-Aug-2013genomic DNA12316L,27I,41T,83L,84N,91V,120K,136I,148V,180D,225S
MN694998F096964Uganda20-Aug-2013genomic DNA12316L,27I,41T,50G,59I,83L,91Q,96L,116A,135V,148V,178T
MN650486F107280R15Uganda28-Mar-2012genomic DNA12316A,11I,15L,27I,30R,31G,54M,58I,71D,79D,83L,87Q,92P,111P,148V,153V,154K,169F,178T,183G,200S,207T,208G
MN650487F107751R15Uganda18-Apr-2012genomic DNA12316L,14P,27I,41T,110N,120S,148V,180D,208G
MN650488F108382R15Uganda10-May-2012genomic DNA12316L,27I,41T,120S,148V,180D,199R,225S
MN650489F108667R15Uganda17-May-2012genomic DNA12316A,9A,15L,33N,54M,58V,71D,83T,92P,96IM,110N,120G,128D,131R,148V,169F,171V,180D,191I,200S,207T,208G,225S
MN650490F109905R15Uganda29-Aug-2012genomic DNA12316L,15IL,27IV,41ST,83L,116A,120S,148V,180D
MN650491F110076R15Uganda06-Sep-2012genomic DNA12316L,15L,27I,36I,41M,79DE,83T,91A,116A,120S,124V,148V,154K,180D,187D,207A,208G,225S
MN650492F110246R15Uganda15-Oct-2012genomic DNA12316L,27I,41T,86M,87Q,91L,96MV,120S,148V,154K,180D,225S
MN650493F110791R15Uganda05-Dec-2012genomic DNA12316A,11T,12Y,15L,27I,41T,83L,91N,92P,116A,120G,148V,178T,191IV,225S
MN650494F111005R15Uganda14-Jan-2013genomic DNA12316A,15V,27I,54M,58I,71D,83L,111I,116A,120G,128D,148V,169F,180D,203R,208G,225S,230I
MN650495F111063R15Uganda18-Jan-2013genomic DNA12316L,14T,15L,27I,31N,71D,83L,116A,120S,148V,169F,177G,187D,208G,210S
MN694999F115330Uganda23-Jan-2014genomic DNA12316L,14P,27I,31G,33N,79D,83L,91V,110N,115V,116A,120G,123A,148V,160S,180D,208G,210S,225S,230I
MN695000F115364Uganda01-Jul-2014genomic DNA12316L,27I,41T,83L,87Q,91V,110S,120S,124V,148V,183G,200Q,205M,208G,225S
MN650496F184611R15Uganda14-Oct-2012genomic DNA12312V,6L,27I,41T,50G,59I,75D,83T,87Q,96I,116A,148V,180D,208G,225S
MN650497G008861R15Uganda27-Sep-2011genomic DNA12316L,14S,15L,16T,27I,50A,83L,116A,124V,148V,208G
MN650498G009028R16Uganda14-Jan-2014genomic DNA12316L,15L,27I,41A,45D,54S,83L,91V,116A,120S,124V,148V,177C,178T,180D,225S
MN650499G030323R15Uganda25-Jun-2012genomic DNA12316A,11I,12Y,15L,29D,54M,56M,58V,68I,71D,83L,86A,87Q,92P,96I,111P,116V,128D,131R,148V,154K,169F,171V,177G,178T,191I,204G,207T,208G
MN650500G053463R15Uganda27-Sep-2011genomic DNA12316L,14S,27I,83L,116N,120S,148V,154K,180D
MN695001G074147Uganda15-Jan-2014genomic DNA12312L,6L,11A,12Y,14N,15L,27I,78I,83L,91V,96L,120S,124V,148V,180D,183T,191I,210S,225S
MN650501G095960R15Uganda08-Nov-2012genomic DNA12316A,11I,15L,27I,54M,58V,71D,83IL,98D,111T,116A,120G,128D,148V,154K,169F,178T,183G,203R,208G,210S
MN695002G096800Uganda25-Feb-2014genomic DNA12316L,14P,27I,29D,41T,83L,87Q,91V,120S,128D,148V,180D,210S,225S
MN650502G100812R16Uganda18-Sep-2013genomic DNA12316A,11I,14G,15L,27I,30R,31G,33N,54M,58I,71D,79D,83L,87Q,91L,92P,96L,111P,116A,124F,148V,154K,169F,178T,183G,191I,200S,203R,208G,210S
MN650503G102498R15Uganda15-Nov-2012genomic DNA12316L,14P,27I,79D,83T,87P,98D,116AT,120S,124IV,148V,154KR,171V,180D,194S,225S
MN650504G103427R16Uganda23-Aug-2013genomic DNA12316A,11I,15L,27I,30R,31G,54M,58I,71D,83L,91V,92P,111P,120S,128D,129L,148V,154K,169F,178T,180D,200S,203R,225S
MN650505G103443R15Uganda23-Sep-2011genomic DNA12316L,27I,41T,50G,59I,83L,110S,120S,148V,180D,200N,203R,225S
MN650506G107265R16Uganda08-Apr-2014genomic DNA12316L,15L,27I,41T,71D,91V,116A,120S,128D,148V,154K,169F,171V,178T,180D,187D,203R,225S
MN650507G107663R15Uganda11-Apr-2012genomic DNA12316L,27I,83L,91N,116A,120S,148V,178T,225S,230I
MN650508G108773R15Uganda23-May-2012genomic DNA12316L,27I,50T,83L,87Q,91V,98D,120S,148V,154K,225S
MN650509G109176R15Uganda17-Jul-2012genomic DNA12316L,15L,27I,41T,83M,116A,120G,124V,148V,154K,180D,225S
MN650510G110988R15Uganda16-Jan-2013genomic DNA12316L,14P,15L,27I,29D,41T,50T,83L,91V,110N,120S,135V,148V,180D,208G,210S,225S
MN650511G110996R15Uganda11-Jan-2013genomic DNA12316L,27I,41T,50G,83L,91Q,116A,120S,135V,148V,178T,210S
MN650512G111006R15Uganda11-Jan-2013genomic DNA12316L,15L,27I,41T,71D,83L,91V,116A,120S,123S,148V,154K,180D,191I,208G,213D
MN650513G111593R15Uganda26-Feb-2013genomic DNA12316A,11IV,14G,15M,30R,31G,33T,41A,54M,56M,58I,59I,71D,83L,92P,111T,115IV,120S,128D,148V,154K,169F,178ST,180D,200S,203R,208G,210S
MN650514G112221R15Uganda27-Mar-2013genomic DNA12316L,15L,27I,41T,71D,91V,96I,116A,120S,128D,148V,169F,187D,203R,208G,210S
MN650515G114069R17Uganda27-Jul-2015genomic DNA12316A,14S,15L,27I,41T,71D,86T,87Q,91V,96I,116T,120S,148V,154K,169F,178T,180D,187D,203R,208G,225S
MN650516G114954R16Uganda17-Oct-2013genomic DNA12316L,14V,15L,27I,41T,50S,83L,87Q,96I,116AT,120G,124V,128D,148V,180D,225S
MN695003G115331Uganda28-Jan-2014genomic DNA12316L,14V,15M,27I,54L,58A,83M,91V,110N,120S,123A,148V,154K,171V,180D,194S,208G,225S
MN695004G115399Uganda20-Jan-2015genomic DNA12316V,27I,54L,79D,83M,87Q,91V,120S,148V,171V,180D,225S
MN695005G115404Uganda16-Feb-2015genomic DNA12314R,6P,14S,27I,41V,50S,54S,58I,83T,91N,116D,120S,148V,154K,180D,225S
MN650517G192364R17Uganda27-Jul-2015genomic DNA12316A,11I,14V,15V,27I,31G,36I,45D,50H,58I,71D,83L,92P,113D,120S,124V,128D,148V,154K,169F,170R,178T,180D,191I,203R,207A,208G
MN650518H000066R15Uganda12-Jul-2012genomic DNA12316L,15L,27I,41T,83L,86A,87Q,91H,92P,93Q,96L,116A,120H,148V,154K,177C,180D,225S
MN695006H006032Uganda23-Sep-2013genomic DNA12316L,14P,15L,27I,41T,50S,54M,83Q,91V,110S,120S,135V,148V,180D,207Q,208G,225S
MN650519H010514R15Uganda15-Aug-2011genomic DNA12316A,9I,11T,15V,27I,30R,31G,58I,71D,83A,92P,110S,148V,180D,225S
MN650520H023449R15Uganda31-Aug-2011genomic DNA12316A,11I,14S,15L,27I,54M,58I,71D,83L,92P,111P,120GS,128D,148V,154K,169F,178T,180D,200S,203R,208G
MN695007H059862Uganda20-May-2015genomic DNA12316L,15L,27I,41A,83T,87Q,91L,92P,98D,110N,116A,120A,124V,148V,180D,208G,225S
MN650521H069409R15Uganda01-Sep-2011genomic DNA12316A,15V,27I,54M,58I,71D,83L,87Q,92P,96L,111I,120S,128D,148V,154K,169F,178T,183G,187D,200Q,203R,207AP,208G
MN695008H073402Uganda12-Sep-2013genomic DNA12316A,11I,14S,15L,27I,47C,54S,58V,71D,72V,83I,92P,111I,120G,148V,169F,178T,180D,203R,208G
MN650522H094681R15Uganda26-Sep-2012genomic DNA12316L,27I,83L,87Q,91V,98D,116A,120G,148V,178T,208G
MN695009H096194Uganda05-Sep-2013genomic DNA12316L,15L,27I,83L,116A,148V,180D,225S
MN650523H101745R16Uganda14-Jul-2014genomic DNA12316A,11I,14S,15L,27I,31G,41T,58I,71D,83L,86M,87Q,91L,92P,96L,102G,111I,120S,128D,148V,154K,169F,178T,183G,200S,203R,207A,208G
MN650524H103533R15Uganda28-Sep-2011genomic DNA12316L,27I,29D,41T,50T,83L,91V,120S,135V,148V,154K
MN650525H104376R16Uganda10-Sep-2013genomic DNA12316L,14P,15L,27I,44A,83L,91V,110N,115M,116A,120AG,123A,148V,154K,225S
MN650526H104407R15Uganda27-Aug-2012genomic DNA12316L,14P,27I,29D,41T,83L,87Q,96I,110N,115V,116T,120S,148V,180D,208G,225S
MN650527H107622R15Uganda10-Apr-2012genomic DNA12316A,11I,15L,27I,30R,31G,48I,54M,58I,71D,83L,92P,98D,111P,120S,128D,148V,153V,154K,169F,171V,178T,183G,200S,207T,208G,210S
MN650528H107761R16Uganda09-Apr-2014genomic DNA12316L,15L,27I,41T,50T,83L,87Q,91V,116A,120S,123A,148V,180D,203R,208G,210S
MN650529H108685R15Uganda17-May-2012genomic DNA12316L,14P,15L,41I,83L,86P,87Q,91V,96L,98D,110N,120S,125Q,135V,148V,180D
MN650530H108936R15Uganda01-Jun-2012genomic DNA12316A,14P,15F,16T,27I,54M,58V,71D,83T,92P,111I,120G,123A,128D,148V,154K,169F,171V,178T,187N,199R,200S,203R,208G,211I,225S
MN650531H109402R16Uganda10-Sep-2013genomic DNA12316L,14P,15L,27I,41M,54S,83L,91A,110S,120S,148V,154K,180D,225S
MN650532H109606R15Uganda22-Aug-2012genomic DNA12316L,15L,27I,41T,50G,83L,91V,96L,120S,135V,148V,178T,180D,199R,208G,230IV
MN650533H110230R15Uganda13-Oct-2012genomic DNA12316L,27I,41T,71D,83L,91V,116A,120S,148V,180D,183T,187DE,208G
MN650534H110450R15Uganda05-Nov-2012genomic DNA12316A,11I,15V,31G,54M,58I,71D,92P,111T,120G,128D,148V,154K,167K,169F,171V,180D,200S,203R,207S,208G
MN650535H110890R15Uganda12-Dec-2012genomic DNA12316A,11I,12Y,15V,27I,30R,31G,54M,58I,71D,79D,83L,86Q,87Q,91L,92P,96L,111P,148V,154K,169F,171V,177C,180D,187D,200S,203R,207T,208G,225S
MN650536H110913R15Uganda09-Jan-2013genomic DNA12316L,14P,27I,41T,50S,54V,83L,87Q,91IV,96I,116T,128D,135V,148V,180D,225S
MN650537H111031R15Uganda16-Jan-2013genomic DNA12316A,11I,14S,15L,16T,27I,50G,54M,58V,71D,83L,116AG,120S,124V,148V,169F,178T,180D,210S,225S
MN650538H111146R15Uganda07-Feb-2013genomic DNA12316A,11I,14P,15V,27I,48I,54L,58I,71D,78V,83L,111A,116A,120G,128D,148V,154K,169F,171A,177G,180D,199R,200S,207T,208G,225T,229K,230I
MN695010H115332Uganda10-Feb-2014genomic DNA12313L,6A,11T,12Y,15L,27I,29D,41T,50H,83L,86I,87Q,96I,116T,118I,148V,180D,208G,210S,225S
MN695011H115366Uganda08-Jul-2014genomic DNA12316L,14P,27I,41T,50S,83L,91V,96V,120S,135V,148V,180D,225S
MN695012H115390Uganda03-Nov-2014genomic DNA12312V,6A,11I,14S,15L,27I,30R,31G,54M,58I,71D,83L,92P,111P,128D,148V,153V,154K,169F,171V,178T,183G,200S,207S,208G,210S
MN695013J005965Uganda03-Sep-2013genomic DNA12316L,14P,15L,16T,27I,31G,33K,50A,68I,79D,83Q,91V,110N,148V,154K,225S
MN650539J025319R15Uganda12-Jun-2012genomic DNA12316L,15L,27I,41T,83I,86M,87Q,91L,96I,110N,116T,120S,148V,154K,180D,225S,230I
MN650540J035100R16Uganda10-Jul-2013genomic DNA12316LM,14S,15L,27I,54L,83T,91V,115V,116A,120S,148V,180D
MN695014J036927Uganda31-Oct-2014genomic DNA12316L,14S,27I,83L,87Q,91H,92P,116A,148V,180D,208G,230I
MN650541J039126R15Uganda18-Jul-2012genomic DNA12316A,11I,14P,15L,27I,30R,31G,54M,58I,71D,83L,92P,111P,128D,148I,153V,154K,169F,178T,183G,200S,207S,208G
MN695015J056339Uganda15-Jan-2014genomic DNA12316A,11I,15V,27I,30R,31G,54S,58I,71D,83L,92P,111I,128D,148V,154K,169F,171A,178T,183G,200S,203R,207S,208G
MN650542J066196R16Uganda09-Jul-2013genomic DNA12316A,11I,14S,15L,27I,48I,54M,58I,71D,83L,92P,111P,120G,128D,148V,180D,199R,200A
MN695016J068502Uganda26-Aug-2013genomic DNA12316L,27I,83L,91A,148V,178T
MN650543J068714R15Uganda09-Nov-2012genomic DNA12316L,15L,30R,41V,49S,58A,83L,91V,120S,132K,135V,148V,149G,154K,180D,191I,207S,208G,225S
MN695017J096658Uganda21-Aug-2013genomic DNA12316L,15L,27I,41T,50S,79D,83L,87Q,91V,96I,98D,116T,120S,148V,178T,200S,203R,208G
MN650544J101869R15Uganda26-Jun-2012genomic DNA12316L,27I,83L,148V,178T,180DE,225S
MN650545J102068R15Uganda16-Aug-2012genomic DNA12316L,14S,15L,27I,41T,71D,83L,91A,120S,148V,154K,180D,191I
MN650546J105835R16Uganda09-Oct-2013genomic DNA12316A,9H,14S,15L,27I,41T,54M,58I,71D,83L,91V,111P,120G,128D,148V,154K,169F,178T,180D,191I,200S,203R,208G
MN650547J107089R15Uganda23-Mar-2012genomic DNA12316ALPV,11IV,13RS,14P,15FL,27I,30KR,31AG,50EGQR,54IMT,58IT,71D,83ST,86AITV,91ILPT,92AEPQ,94DGNS,111LP,116A,120GS,124IV,128DE,148V,153IV,154KR,169F,178T,183H,207T,208G,225S
MN650548J107356R15Uganda29-Mar-2012genomic DNA12316L,27I,41T,83L,87Q,96I,110S,116A,120S,124V,148V,179A,180D,183A
MN650549J107479R15Uganda03-Apr-2012genomic DNA12316L,11I,27I,41T,83L,87Q,96I,116Q,120S,148V,153V,171I,183G
MN650550J107885R15Uganda19-Apr-2012genomic DNA12316L,15L,27I,36I,41T,71D,83L,87Q,91V,98D,116A,120S,128D,148V,154K,169F,171V,178T,180D,187D,191I,207S,208G,225S
MN650551J108076R15Uganda26-Apr-2012genomic DNA12316L,15L,27IV,33N,36IV,41T,54S,71D,83L,87Q,91V,96L,116A,128D,148V,154K,169F,171A,178T,180D,187D,207T,208G,225S
MN650552J108092R15Uganda14-Dec-2012genomic DNA12316L,14S,15L,27I,36I,41T,71D,83L,87Q,91V,96I,98D,116T,120S,128D,148V,154K,169F,171C,178T,180D,203R,210S
MN650553J108432R15Uganda17-May-2012genomic DNA12316L,14N,83L,116A,120S,148V,180D,216ST,225GS,230IV
MN650554J109429R16Uganda20-Sep-2013genomic DNA12316L,27I,83L,87Q,91H,92P,116A,148V
MN650555J109893R15Uganda28-Aug-2012genomic DNA12316A,10L,11I,14P,15F,27I,29D,31G,33N,48A,50S,54M,58V,71D,92P,111T,120S,128D,148V,154K,169F,178T,179A,200S,207T,208G,210S,225S,229K
MN650556J109932R15Uganda24-Sep-2012genomic DNA12316L,15L,41T,50G,59I,83L,91V,96L,110N,120A,148V,154K,180D,208G,225S
MN650557J110257R15Uganda30-Nov-2012genomic DNA12316L,27I,50A,83L,91V,116A,120S,128D,148V,180D,225S,230I
MN650558J111008R15Uganda15-Jan-2013genomic DNA12316A,11M,15L,26A,27I,30R,31G,50G,54M,58V,71D,83L,87HQ,111P,120H,128D,148V,153V,154K,169F,171I,178T,183S,187D,200S,208G,225A
MN695018J115367Uganda14-Jul-2014genomic DNA12316L,14P,27I,41T,83T,86Q,87Q,91V,96I,98D,120S,135V,148V,171V,180D
MN695019J115422Uganda10-Jun-2015genomic DNA12316L,27I,83L,87Q,91V,120S,128D,131R,136M,138F,148V,154K,160S,180D,208Q
MN695020K004814Uganda28-Aug-2013genomic DNA12316M,27I,71D,91V,120S,148V,154K,169F,171V,177G,187D,191I,208G,225S
MN650559K023344R15Uganda15-Aug-2011genomic DNA12316L,15L,27IV,41I,83L,87Q,91V,98D,100K,116A,120G,124V,148V,180D,208G
MN650560K038847R15Uganda07-Aug-2012genomic DNA12316L,15L,27I,41T,50A,83Q,91V,148V,180D,191I,208G
MN650561K038847R16Uganda03-Dec-2013genomic DNA12316L,15L,27I,41T,50A,83Q,91V,148V,180D,191I,208G
MN650562K049065R16Uganda18-Jul-2013genomic DNA123114P,27I,29D,41T,83L,86A,87Q,96I,110N,116T,120S,135V,148V,154K,180D,225S
MN650563K051783R15Uganda14-Mar-2012genomic DNA12316L,15V,27I,41T,54S,83L,87Q,91V,96I,116A,120S,148V,160S,180D,225S
MN650564K051830R15Uganda01-Aug-2012genomic DNA12316L,14S,15L,27I,83L,91V,116A,120S,148V,180D,208G
MN650565K058005R16Uganda16-Jul-2013genomic DNA12316L,27I,41T,83L,91P,96L,120S,124V,148V,183G,203R,208G,225S,230I
MN650566K061825R16Uganda18-Jul-2013genomic DNA12312V,6L,27I,41T,50S,83L,87Q,91V,120S,148V,180D,208G,225S
MN650567K081952R15Uganda24-Aug-2011genomic DNA12316L,27I,41T,71D,83L,87Q,96I,98D,116T,148V,154K,169F,171A,178T,180D,187D,200AT,203KR,207A,208G,225S
MN695021K084224Uganda18-Sep-2013genomic DNA12316M,27I,41T,83L,116A,120S,148V,180D
MN695022K094463Uganda17-Mar-2014genomic DNA12316L,15L,27I,41T,91V,110N,116A,120S,148V,154K,180D
MN650568K103624R15Uganda13-Oct-2011genomic DNA12316A,15L,30R,31G,54M,58I,71D,83L,92P,96I,111P,116A,128D,148V,154K,169F,178T,180D,200A,203R,204G,207T,208G
MN650569K104483R16Uganda12-Sep-2013genomic DNA12316L,27I,71D,83L,148V,180D,225S
MN650570K107420R15Uganda29-Mar-2012genomic DNA12316L,13N,14P,15L,31N,58A,71D,78S,83T,91V,116A,128D,148V,154K,169F,178T,180D,187D,200A,203R,208G,210S
MN650571K108750R15Uganda23-May-2012genomic DNA12316A,11I,12Y,15L,29D,54M,58V,71D,83L,86A,87Q,91F,92P,96I,98D,111P,116I,131R,148V,154K,169F,171V,177G,178T,190M,200A,203R,204G,207A,208G,230I
MN650572K109250R15Uganda26-Jul-2012genomic DNA12316A,11I,15L,27I,31G,33N,54M,58I,71D,83L,87Q,92P,96I,111P,116A,128D,148V,169F,171C,178T,180D,199R,200S,203R,207T,208EGQR
MN650573K109878R15Uganda28-Aug-2012genomic DNA12316L,15L,27I,41T,50S,54M,83L,91V,120S,128D,148V,154K,160T,180D,225S
MN650574K110070R15Uganda06-Sep-2012genomic DNA12316L,15L,16ST,83L,91V,98DE,120S,136M,148V,180D
MN650575K110096R15Uganda05-Sep-2012genomic DNA12316T,12Y,14S,15V,27I,54M,58I,71D,83L,111P,116A,120S,128D,148V,154K,169F,171A,178T,180D,187D,191I,200S,207T,208G
MN650576K110193R15Uganda30-Aug-2012genomic DNA12316L,11A,15M,27I,54L,58A,79D,83M,91V,120S,123AP,148V,154K,171V,180D,208G,213D
MN650577K110193R16Uganda09-Oct-2013genomic DNA12313L,6PS,11A,12Y,15M,27I,54L,58A,79D,83M,91V,120S,123A,148V,154K,171V,180D,187D,208G,213D
MN650578K110258R15Uganda26-Nov-2012genomic DNA12316L,27I,41T,83L,86A,87Q,91V,96I,116T,120S,148V,154K,180D,199R,208G
MN650579K110274R15Uganda04-Dec-2012genomic DNA12316L,15L,27I,50T,83L,91V,116A,120S,148V,154K,180D,208G,225T
MN650580K110282R15Uganda30-Nov-2012genomic DNA12316A,14G,15V,24A,27I,58I,71D,83L,92P,111I,120S,128D,148V,154K,169F,178T,183G,187D,200S,203R,208G,225S
MN650581K110842R15Uganda06-Dec-2012genomic DNA12316L,16T,27I,54L,83L,91V,116A,128D,148V,171C,180D,225S
MN650582K110876R15Uganda17-Dec-2012genomic DNA12316L,15IL,27I,50S,83L,87Q,120S,128D,148V,178T,225S
MN650583K110999R15Uganda11-Jan-2013genomic DNA12316L,27I,41T,83L,116A,124V,148V,180D,208G,210S,225S
MN650584K111588R15Uganda05-Mar-2013genomic DNA12314H,6A,11T,12Y,14S,15V,26A,27I,58V,71D,79D,83L,87Q,92P,96L,111P,115V,116Q,120G,128D,131R,148V,154K,169F,171V,177S,178T,187D,200A,203R,207T,208G
MN650585K114680R16Uganda18-Sep-2013genomic DNA12316M,27I,50G,83L,87HQ,91V,116A,120S,128D,148V,180D,198Y,210S,225S
MN650586K114915R16Uganda10-Oct-2013genomic DNA12316L,27IV,83L,116A,120S,148V,180D
MN695023K115326Uganda14-Nov-2013genomic DNA12316L,27I,41T,50A,77M,83M,87Q,91V,98D,116A,120S,124V,148V,154K,180D,203R,208G,225S
MN695024K115368Uganda15-Jul-2014genomic DNA12316L,14P,27I,78V,83L,91V,120S,148V,171V,180D
MN695025K115407Uganda02-Mar-2015genomic DNA12312V,6A,11I,14N,15L,27I,54M,58I,71D,83M,111P,115L,116A,120S,148V,169F,178T,200S,207T,208G
MN695026K185000Uganda17-Jul-2014genomic DNA12316L,11I,27I,50V,83L,91V,96I,116T,120S,128D,148V,178T,180D,225S,230I

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