<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Ndiaye (2013) HIV Type 1 Subtype C Remains the Predominant Subtype in Men Having Sex with Men in Senegal AIDS Res. Hum. Retroviruses 29 (9), 1265-1272 (201 2.81e-156 39 39 Naive PBMC Direct PCR Molecular epidemiology

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AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
HF947664MS1005Senegalgenomic DNA1922127I,30R,44A,83L,91N,116A,120G,123A,148V,180D,208G,213D,218CF
HF947688MS1037Senegalgenomic DNA1122511G,14S,27I,31G,33N,41T,71D,83L,87Q,91V,96I,112N,115V,116T,120S,124V,128D,148V,154K,169F,178T,180D,187D,203R,207Q,208G,216X,225A
HF947717MS1045Senegalgenomic DNA1522115L,27I,31G,33N,41T,71D,91V,96L,115V,116A,120A,124V,148V,154K,169F,178T,180D,187D,191AV,199R,200N,203R,208G,216K,221A
HF947718MS1046Senegalgenomic DNA2122544A,83L,116A,123V,148V,180D,208G,225S
HF947666MS1067Senegalgenomic DNA1221514S,27I,31G,33N,41T,71D,83L,87P,112N,115V,116A,120S,124V,128D,154K,160S,169F,178T,180D,187D,203R,208G
HF947722MS1074Senegalgenomic DNA62126L,7R,11I,12Y,14S,44A,83L,86A,87Q,91V,96I,116A,120S,124V,148V,178T,183G,208AV
HF947689MS1078Senegalgenomic DNA2123125KN,26L,44A,83M,86P,87Q,96I,116T,120T,148V,180D,225X,231W
HF947723MS1081Senegalgenomic DNA22286L,8X,14S,15L,31G,33N,41T,71D,83L,91V,115V,116A,120S,124V,128D,148V,154K,169F,178T,180D,187D,199R,200N,207Q,208G,216RT,225A,226P,228Q
HF947724MS1095Senegalgenomic DNA1221612S,14S,15L,27I,31G,33N,41T,71D,83L,91V,115V,116A,120S,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G,216R
HF947671MS1106Senegalgenomic DNA721211X,14P,27I,36I,79D,83L,86P,87Q,96I,116T,120S,148V,180D
HF947673MS1115Senegalgenomic DNA1522515H,27I,50T,83M,87Q,96I,115V,116T,124V,148V,180D,216R
HF947683MS1118Senegalgenomic DNA823111I,14S,15M,27I,54M,58I,71D,79D,83A,92P,120S,135V,148V,169F,178T,180D,187D,203R,208G,216RT,231G
HF947711MS1124Senegalgenomic DNA92239K,12P,14P,15L,25IM,26L,31G,33N,41T,71D,83L,91V,110N,115V,116A,120G,121T,128D,148V,154K,169F,178T,180D,187D,199R,200N,207Q,208G,217X,223K
HF947680MS1152Senegalgenomic DNA722410X,11I,12Y,14S,15M,26A,27I,36I,45D,54M,58I,83L,87Q,92P,110N,120S,124V,128D,131R,148V,178T,200G,203R,208G,215I,216S,224Q
HF947672MS1157Senegalgenomic DNA62196H,14S,15H,26A,27I,41T,54M,58I,71D,83T,92P,110NT,116AG,120S,124IV,135V,148V,169F,178T,180DE,187DE,200SY,203R,208G,210S,216A
HF947690MS1162Senegalgenomic DNA1421914P,44A,83M,87Q,96I,116T,166DY,180D,217X
HF947675MS1169Senegalgenomic DNA12256S,7P,8R,9T,14S,15L,27I,31G,33N,41T,71D,83L,91V,115V,116A,120S,124V,128D,148V,154K,169F,171V,178T,180D,187D,200N,203R,207S,208G,225S
HF947681MS1178Senegalgenomic DNA1222612S,14S,15L,31G,33N,41T,71D,83L,91V,110N,115V,116A,120S,124V,128D,148V,154K,169F,178T,180D,187D,191I,199R,200N,207Q,208G,216N,221X,223R,225A
HF947710MS1193Senegalgenomic DNA62156F,14S,15X,27I,31G,33N,41T,71D,83M,91V,116A,120S,124V,148V,154K,169F,178T,180D,187D,203R,208G
HF947696MS1200Senegalgenomic DNA72267P,11X,14S,15F,31G,33N,41T,71D,91V,110N,116A,120S,124V,148V,154K,169F,178T,180D,187D,203R,208G,216N,223X,226P
HF947750MS1203Senegalgenomic DNA2022327I,41T,54M,58I,71D,83M,92P,120S,124V,135V,148V,154K,169F,177S,178T,200S,203R,207S,208G
HF947728MS1209Senegalgenomic DNA1222614S,27I,50T,54M,58I,75D,116A,120S,123PR,132K,148V,169F,178T,203R,208G,209S,216N,223X
HF947731MS1221Senegalgenomic DNA32276X,29EQ,83L,86P,87Q,120S,216RS,221X,226Q,227R
HF947698MS1259Senegalgenomic DNA2922831G,33N,71D,75EV,76EK,83L,91V,115V,116A,120G,124V,128D,148V,154K,169F,170R,178T,180D,187D,199R,200N,207Q,208G,225A,228Q
HF947737MS1276Senegalgenomic DNA722110X,11T,14P,27I,41T,71D,83I,86Q,87Q,92P,96I,116T,120S,148V,154K,169F,178T,180D,187D,203R,207A,208G,216K,221G
HF947738MS1285Senegalgenomic DNA822510W,27I,50T,83M,86A,87Q,96I,116T,124V,148V,180D,216R,225A
HF947692MS1289Senegalgenomic DNA2122326A,27I,41T,54M,58I,71D,83T,92P,120S,135V,148V,169F,178T,188S,200S,203R,208G,210S
HF947739MS1293Senegalgenomic DNA1421914S,15L,27I,31G,33N,41T,71D,83L,87Q,91V,115V,116A,120S,124V,128D,154K,169F,178T,180D,187D,199R,200N,203R,207Q,208G
HF947740MS1295Senegalgenomic DNA1122611G,14S,15M,27I,41A,54M,58I,60EG,71D,83I,92P,120S,124V,132K,135V,148V,169F,178T,200S,203R,208G
HF947703MS1296Senegalgenomic DNA1522215C,27I,54M,58I,71D,87Q,115V,120S,124V,139H,141L,149G,154K,169F,178T,200S,203R,208G,222R
HF947706MS1302Senegalgenomic DNA1122511G,15L,16X,27I,41T,83L,91V,110N,116A,120S,148V,154K,180D,221GV,222L,225A
HF947741MS1303Senegalgenomic DNA1222512S,14S,15F,31G,33N,41T,71D,83L,87Q,91V,92V,96L,115V,116A,120H,124V,128D,132K,136M,148V,154K,169F,178T,180D,187D,199R,200N,203R,207Q,208G,221X,222A,225A
HF947742MS1305Senegalgenomic DNA1222214S,15M,27I,50T,54M,58I,75D,116A,120S,132K,148V,169F,178T,203R,208G,222Q
HF947745MS2020Senegalgenomic DNA721911I,12Y,14S,15M,26A,27I,36I,45D,54M,58I,83L,87Q,92P,98D,110N,120S,124V,128D,131R,148V,178T,200G,203R,208G
HF947747MS3012Senegalgenomic DNA2022525I,27I,31G,33N,41T,71D,83I,87Q,91V,115V,116A,120S,124V,148V,154K,169F,170R,178T,180D,187D,199R,200N,203R,207Q,208G,216R,225A
HF947749MS3017Senegalgenomic DNA2022327I,41T,54M,58I,71D,83M,92P,120S,124V,135V,148V,154K,169F,177S,178T,200S,203R,207S,208G
HF947694MS3022Senegalgenomic DNA2022026A,27I,41T,54M,58I,71D,83T,92P,120S,135V,148V,169F,178T,200S,203R,208G,210S
HF947705MS4040Senegalgenomic DNA1221414P,15IM,26A,27I,41T,54M,58I,71D,83I,91IV,92P,110N,120S,135V,148V,169F,178T,200S,203R
HF947707MS4077Senegalgenomic DNA1121511G,14S,15M,26A,27I,41T,54M,58I,92P,120G,135V,148V,180D,200A,203R

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