<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Carr (2013) HIV-1 recombinants with multiple parental strains in low-prevalence, remote regions of Cameroon: evolutionary relics? Retrovirology 7, 39 (2010) 2.91e-150 24          

Download sequences

AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
GU20149401CM.0018NDCameroon: Ndikinimekgenomic DNAsubtype: CRF02_AG12316A,11I,14S,15M,27I,54M,58I,71D,92P,120S,135V,148V,169F,178T,180D,203R,208G
GU20149701CM.0096MACameroon: Massangamgenomic DNAsubtype: unique recombinant between CRF02_AG andCRF13_cpx12316A,14S,15M,27I,41T,54M,58I,71D,83T,92P,120S,124V,135V,148V,169F,178T,200S,203R,208G,225S
GU20149801CM.0119MACameroon: Massangamgenomic DNAsubtype: CRF02_AG12316A,10L,11T,14N,15M,27I,54M,58I,71D,83T,92Q,120S,148V,169F,178T,200S,207T,208G
GU20149901CM.0126MACameroon: Massangamgenomic DNAsubtype: CRF02_AG12316A,14V,15M,27I,54M,58I,71D,83I,92P,120S,135V,148V,169F,178T,200S,203R,208G,225S
GU20149501CM.0144NDCameroon: Ndikinimekgenomic DNAsubtype: CRF02_AG12316A,14S,15M,31G,54M,58I,59I,71D,83L,120G,128D,129L,148V,169F,178T,180D,200S,207T,208G,225S
GU20150001CM.0186BACameroongenomic DNAsubtype: CRF02_AG12316A,14S,15M,27I,41T,54M,58I,71D,83T,91N,92P,120G,135V,148V,169F,178T,187D,200S,203R,208G
GU20149601CM.0191NDCameroon: Ndikinimekgenomic DNAsubtype: CRF02_AG12316A,11T,26A,41T,54M,58V,71D,91A,92P,120S,135V,148V,169F,178T,200S,203R,208G,225S
GU20150101CM.1122MOCameroongenomic DNAsubtype: CRF18_cpx12316A,11T,26A,27I,33N,54M,58V,71D,83T,92P,120S,148V,169F,178T,183H,207T,208G
GU20150201CM.1188NGCameroongenomic DNAhypermutated virus;subtype: CRF02_AG12316A,11T,14P,15M,16T,27I,41T,54M,58I,71D,80*,83T,86A,87Q,91F,92P,97K,120S,127R,137R,148V,169F,187D,200A,207T,208G,210S
GU20150301CM.1362NGCameroongenomic DNAhypermutated virus;subtype: unique recombinant12313T,6A,15L,23*,31G,33N,54M,58I,71D,80*,82K,83I,86A,87Q,89R,91Y,92P,101R,116A,117*,120S,124V,133*,137R,148V,167K,169F,178T,180D,184*,200S,207A,208R,210S,229K
GU20150501CM.1402MVCameroongenomic DNAsubtype: unique recombinant between F2 andCRF01_AE12316L,14S,27I,71D,116A,120S,124V,148V,169F,183G,187D,208G
GU20151601CM.1445MVCameroongenomic DNAsubtype: A212316A,71D,92P,120S,148V,169F,178T,180D,187D,203R
GU20150801CM.4038STNCameroongenomic DNAsubtype: unique recombinant between subtypes A1 andH12316A,11I,14S,15L,26A,54M,58I,71D,78V,83T,87Q,92P,96I,116R,120S,128D,148V,169F,171A,178T,200S,203R,207A,208G,225S
GU20151702CM.017BBYCameroongenomic DNAhypermutated virus;subtype: CRF02_AG12316A,11I,14N,15L,27I,29K,46E,48A,51N,54M,58I,71D,82K,83L,92P,101R,116E,117*,120S,127E,132K,133*,137K,148V,169F,173K,178T,200S,208G,215I,222E,223E
GU20150702CM.1590LECameroongenomic DNAhypermutated virus;subtype: unique recombinant12316A,23*,31G,33N,54M,58I,59M,71D,78T,80*,82K,87Q,91H,92P,95H,96I,116A,120H,143K,148V,156R,169F,178T,180D,200S,207T,208G,223R,229K
GU20151002CM.1710LECameroongenomic DNAhypermutated virus;subtype: unique recombinant between CRF02_AG andCRF11_cpx12316A,27I,29K,51N,54I,58I,71N,75K,76K,80*,81N,83I,89E,92P,98K,106E,113K,117*,120G,124V,127E,132K,133*,137E,143K,148V,152N,154K,159K,162K,163N,166N,169F,175K,178T,180K,183G,184*,203R,208E,212K,213K,214I,215I,222E,223K,225S
GU20150602CM.1807LECameroongenomic DNAhypermutated virus;subtype: unique recombinant12316A,14S,15M,23*,27I,41T,54M,58I,60K,71D,80*,100K,116A,117*,118I,120G,135V,148V,154K,156R,169F,177G,178T,184*,187K,190M,200S,203R,208E,215I,223R,225S,229K
GU20151502CM.1895LECameroongenomic DNAhypermutated virus;subtype: CRF01_AE12316V,15L,23*,27I,31G,33N,54M,58I,71D,79D,80*,82K,83T,92P,116R,117*,120S,127R,133*,148V,156R,169F,178T,206R,207S,208E,210S,229K
GU20151102CM.1970LECameroongenomic DNAsubtype: CRF02_AG12316A,10W,11T,15V,27I,43I,54M,58I,71D,83A,87Q,91F,92P,96L,120S,148V,169F,178T,203R,208G
GU20151202CM.2172SACameroongenomic DNAsubtype: CRF02_AG12316A,11I,15L,31G,33N,54M,58I,71D,110N,120G,148V,169F,170R,178T,200S,207T,208G
GU20151302CM.3153MNCameroongenomic DNAsubtype: CRF02_AG12316A,11T,14N,15L,27I,31G,54M,58I,71D,91A,92P,115M,120S,128D,148V,154K,169F,178T,200S,207T,208G,210S
GU20150402CM.3205MNCameroongenomic DNAsubtype: unique recombinant12316A,14S,15L,27I,47T,54M,58I,68L,71D,92P,120S,124V,128D,131R,148V,169F,178T,180D,203R,204G,207T,208G
GU20151402CM.3217MNCameroongenomic DNAdefective virus;subtype: CRF02_AG12316A,11I,14S,15M,27I,54M,58I,71D,92P,120S,135V,148V,160S,169F,178T,203R,208G
GU20150903CM.2848YICameroongenomic DNAhypermutated virus;subtype: unique recombinant between subtype G andCRF02_AG12316A,14P,16T,23*,31S,60R,61R,71D,80*,83L,86Q,87Q,92P,96I,110N,115V,116R,117*,120S,127R,137R,148V,156R,169F,178T,183G,184*,187D,203R,206R,208G,223R,225S

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