Genbank References: capsid (p24)

Authors	Title	Citation	E-value	# in Gb	#Pts	ART	Source	Cloning	StudyType
Carlson (2012)	HIV transmission. Selection bias at the heterosexual HIV-1 transmission bottleneck	Science 345 (6193), 1254031 (2014)	9.05e-164	1015	137	Naive	Plasma	Direct PCR	HLA;Acute infection

Download sequences

Accession	IsolateName	Country	Coll Date	Clone	MolType	Source	Note	FirstAA	LastAA	MutList
KM048383	ZM1.9F	Zambia	25-Jan-2008		genomic RNA	plasma		1	231	6L,14P,15L,27I,31N,41T,71D,83L,86I,91V,96I,110N,116T,120G,128D,148V,154K,169F,171V,180D,187D,200A,203R,208G,210S,225S
KM048382	ZM1.9M	Zambia	25-Jan-2008		genomic RNA	plasma		1	231	6L,14P,15L,27I,31N,41T,71D,83L,91V,96I,110N,116T,120G,128D,148V,154K,169F,171V,180D,187D,200A,203R,208G,210S,225S
KM048384	ZM1003F	Zambia	03-Aug-2005		genomic RNA	plasma		1	231	6L,27I,41T,50X,71D,83L,91V,98DE,116A,120G,124V,128D,148V,154K,169F,178T,180D,187D,200NT,203R,208G,225S
KM048385	ZM1006F	Zambia	22-May-2007		genomic RNA	plasma		1	231	6L,14P,27I,31S,41T,59I,71D,91N,107S,110N,116A,120G,124V,135V,154K,169F,178T,187D,203R,208G,225S
KM048386	ZM1006M	Zambia	18-Apr-2007		genomic RNA	plasma		1	231	6L,14P,15L,27I,31S,41T,71D,83L,91T,110N,116A,120G,124V,135V,154K,169F,178T,187D,203R,208G,225S
KM048387	ZM1006M	Zambia	02-Jun-2007		genomic RNA	plasma		1	231	6L,14P,15L,27I,31S,41T,71D,83L,91T,110N,116A,120G,124V,135V,154K,169F,178T,187D,203R,208G,225S
KM048388	ZM1006M	Zambia	10-Nov-2007		genomic RNA	plasma		1	231	6L,14P,15L,27I,31S,41T,71D,83L,91IT,110N,116A,120G,124V,135V,154K,169F,178T,187D,203R,208G,225S
KM048389	ZM1006M	Zambia	02-Feb-2008		genomic RNA	plasma		1	231	6L,14P,15L,27I,31S,41T,71D,83L,91IV,110N,116A,120G,124V,135V,154K,169F,178T,187D,203R,208G,225S
KM048390	ZM1006M	Zambia	04-Dec-2008		genomic RNA	plasma		1	231	6L,14P,15L,27I,31S,41T,71D,83L,110S,116A,120G,124V,135V,154K,169F,178T,187D,203R,208G,225S
KM048391	ZM1006M	Zambia	04-Mar-2009		genomic RNA	plasma		1	231	6L,14P,15L,27I,31AS,41T,71D,83L,91AITV,116A,120G,124V,135V,154K,169F,178T,187D,203R,208G,225S
KM048392	ZM1008M	Zambia	14-Mar-2007		genomic RNA	plasma		1	231	6H,14V,15L,27I,41T,50S,71D,83L,87Q,88V,111T,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
KM048393	ZM1008M	Zambia	08-Jun-2007		genomic RNA	plasma		1	231	6H,14V,15L,27I,41T,50S,71D,83L,87Q,88V,111T,116A,120S,124IV,128D,148V,154K,169F,178T,180D,187D,203R,208G
KM048394	ZM1008M	Zambia	06-Oct-2007		genomic RNA	plasma		1	231	6H,14V,15L,27I,41T,50S,71D,83LS,87Q,88V,111T,116A,120S,124IV,128D,148V,154K,169F,178T,180D,187D,203R,208G
KM048395	ZM1008M	Zambia	05-Jan-2008		genomic RNA	plasma		1	231	6H,14V,15L,27I,41T,50S,71D,83L,87Q,88AV,111T,116A,120S,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
KM048396	ZM1008M	Zambia	26-Mar-2008		genomic RNA	plasma		1	231	6H,14V,15L,27I,41T,50S,71D,83L,87Q,88V,111T,116A,120S,128D,148V,154K,169F,178T,180D,187D,191IV,203R,208G
KM048397	ZM1008M	Zambia	06-Sep-2008		genomic RNA	plasma		1	231	6H,14V,15L,27I,41T,50S,71D,83L,87Q,88AV,111T,116A,120S,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
KM048398	ZM1008M	Zambia	14-Mar-2009		genomic RNA	plasma		1	231	6H,14V,15L,27I,41T,50S,71D,83L,87Q,88AV,111T,116A,120S,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G,229KR
KM048399	ZM1009F	Zambia	14-Sep-2005		genomic RNA	plasma		1	231	2V,6L,14P,15L,27I,41T,50A,71D,83L,107IT,110N,116A,120G,123A,128D,135V,148V,154K,169F,171V,178T,187D,191I,207T,208G
KM048400	ZM1013F	Zambia	16-Aug-2005		genomic RNA	plasma		1	231	6L,15L,27I,36I,41T,50S,54S,71D,79D,83L,86P,91V,116A,120S,128D,148V,169F,178T,187D,191I,207S,208G,225S
KM048401	ZM1016M	Zambia	04-Aug-2005		genomic RNA	plasma		1	231	6L,15M,27I,41T,50S,54S,71D,83I,86A,91V,116A,120A,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
KM048402	ZM1019F	Zambia	24-Aug-2005		genomic RNA	plasma		1	231	6L,14P,15L,27I,41T,71D,83L,91IV,110N,116A,120S,128D,148V,169F,171C,180D,187D,203R,208G,225S
KM048403	ZM1023M	Zambia	26-May-2007		genomic RNA	plasma		1	231	14P,27I,41T,71D,83L,110N,116A,120S,124V,128D,148V,169F,180D,187D,203R,208G
KM048404	ZM1023M	Zambia	27-Jul-2007		genomic RNA	plasma		1	231	14P,27I,41T,71D,83L,110N,116A,120S,124V,128D,148V,169F,180D,187D,203R,208G
KM048405	ZM1023M	Zambia	19-Oct-2007		genomic RNA	plasma		1	231	14P,27I,41T,71D,83L,110N,116A,120S,124V,128D,148V,169F,180D,187D,203R,208G
KM048406	ZM1023M	Zambia	15-Jan-2008		genomic RNA	plasma		1	231	14P,27I,41T,71D,83L,110N,116A,120G,124V,128D,148V,169F,180D,187D,203R,208G
KM048407	ZM1023M	Zambia	23-Apr-2008		genomic RNA	plasma		1	231	14P,27I,41T,71D,83L,110N,116A,120G,124V,128D,148V,169F,178ST,180D,187D,203R,208G
KM048408	ZM1023M	Zambia	18-Oct-2008		genomic RNA	plasma		1	231	14P,27I,41T,71D,83L,110N,116A,120G,124V,128D,148V,169F,178ST,180D,187D,203R,208G
KM048409	ZM1023M	Zambia	17-Jan-2009		genomic RNA	plasma		1	231	14P,27I,41T,71D,83L,110N,116A,120G,124V,128D,148V,169F,178T,180D,187D,203R,208G
KM048411	ZM1024F	Zambia	02-Dec-2006		genomic RNA	plasma		1	231	6L,14P,15L,27I,29D,41T,71D,83L,110N,116A,120S,128D,148V,169F,171V,180D,187D,207S,208G
KM048412	ZM1024F	Zambia	17-Feb-2007		genomic RNA	plasma		1	231	6L,14P,15L,27I,29D,41T,71D,83L,110N,116A,120S,128D,148V,169F,171V,180D,187D,207S,208G
KM048413	ZM1024F	Zambia	12-May-2007		genomic RNA	plasma		1	231	6L,14P,15L,27I,29D,41T,71D,83L,110N,116A,120S,128D,148V,169F,171V,180D,187D,207S,208G
KM048414	ZM1024F	Zambia	28-Jul-2007		genomic RNA	plasma		1	231	6L,14P,15L,27I,29D,41T,71D,83L,110N,116A,120S,128D,148V,169F,171V,180D,187D,207S,208G
KM048415	ZM1024F	Zambia	12-Jan-2008		genomic RNA	plasma		1	231	6L,14P,15L,27I,29D,41T,71D,83L,116A,120S,128D,148V,169F,171V,180D,187D,207S,208G
KM048416	ZM1024F	Zambia	28-Jun-2008		genomic RNA	plasma		1	231	6L,14P,15L,27I,29D,41T,71D,83L,116A,120S,128D,148V,169F,171V,180D,187D,207S,208G
KM048417	ZM1024F	Zambia	06-Dec-2008		genomic RNA	plasma		1	231	6L,14P,15L,27I,29D,41T,71D,83L,116A,120S,128D,148V,169F,171V,180D,187D,207S,208G
KM048410	ZM1024M	Zambia	02-Dec-2006		genomic RNA	plasma		1	231	6L,14P,15L,27I,29D,41T,71D,83L,110N,116A,120GS,128D,148V,169F,171V,180D,187D,207S,208G
KM048418	ZM1025F	Zambia	03-Sep-2005		genomic RNA	plasma		1	231	6L,14P,15L,27I,41T,71D,83L,116A,120S,128D,148V,154K,169F,178T,180DE,187D,203R,208G
KM048419	ZM1027F	Zambia	16-Sep-2005		genomic RNA	plasma		1	231	6L,14P,41T,59I,71D,79D,83L,91AV,110N,116A,120G,124V,148V,154K,169F,177S,178T,187D,208G,210S
KM048420	ZM1034F	Zambia	28-Jul-2005		genomic RNA	plasma		1	231	6A,14S,27I,41T,71D,79DE,83L,91V,116A,120A,128D,136IM,148V,154K,169F,178T,180D,187D,203KR,208G,210S
KM048421	ZM1040F	Zambia	27-Aug-2005		genomic RNA	plasma		1	231	14P,27I,31N,41T,71D,83IM,91V,116A,120S,124V,128D,148V,169F,178T,180D,187D,200NS,203R,208G,225S
KM048422	ZM1043F	Zambia	24-Feb-2006		genomic RNA	plasma		1	231	6L,14P,15L,27I,41T,71D,83L,91V,96I,116T,128D,148V,154K,169F,178T,183DGNS,187D,203R,208G
KM048423	ZM1043M	Zambia	23-Feb-2006		genomic RNA	plasma		1	231	6L,14P,15L,27I,41T,71D,83L,91V,96I,116T,128D,148V,154K,169F,178T,183G,187D,203R,208G
KM048424	ZM1043M	Zambia	24-May-2006		genomic RNA	plasma		1	231	6L,14P,15L,27I,41T,71D,83L,91V,96I,116T,128D,148V,154K,169F,178T,183G,187D,203R,208G
KM048425	ZM1043M	Zambia	13-Dec-2006		genomic RNA	plasma		1	231	6L,14P,15L,27I,41T,71D,83L,91V,96I,116T,128D,148V,154K,169F,178T,183G,187D,203R,208G
KM048426	ZM1043M	Zambia	07-Mar-2007		genomic RNA	plasma		1	231	6L,14P,15L,27I,41T,71D,83L,91V,96I,116T,128D,136LM,148V,154K,169F,178T,183G,187D,203R,208G
KM048427	ZM1043M	Zambia	22-Aug-2007		genomic RNA	plasma		1	231	6L,14P,15L,27I,41T,71D,83L,91V,96I,116T,128D,136LM,148V,154K,169F,178T,183G,187D,203R,208G
KM048428	ZM1043M	Zambia	05-Mar-2008		genomic RNA	plasma		1	231	6L,14P,15L,27I,41T,71D,83L,87HQ,91V,96I,116T,128D,136LM,148V,154K,169F,178T,183G,187D,203R,208G
KM048429	ZM1044F	Zambia	25-Mar-2006		genomic RNA	plasma		1	231	6L,14P,15L,27I,31G,33N,41T,71D,83L,110N,115V,116A,120G,123AP,128D,148V,169F,178T,187D,203R,208G,210S,225S
KM048430	ZM1044M	Zambia	25-Mar-2006		genomic RNA	plasma		1	231	6L,14P,15L,27I,31G,33N,41T,71D,83L,110N,115V,116A,120G,123A,128D,148V,169F,178T,187D,203R,208G,210S
KM048431	ZM1044M	Zambia	17-Jun-2006		genomic RNA	plasma		1	231	6L,14P,15L,27I,31G,33N,41T,71D,83L,115V,116A,120G,123A,128D,148V,169F,178T,187D,203R,208G,210S
KM048432	ZM1044M	Zambia	06-Oct-2006		genomic RNA	plasma		1	231	6L,14P,15L,27I,31G,33N,41T,71D,83L,110S,116A,120G,123A,128D,148V,169F,178T,187D,203R,208G,210S
KM048433	ZM1044M	Zambia	22-Mar-2007		genomic RNA	plasma		1	231	6L,14P,15L,27I,31G,33N,41T,49S,71D,83L,116A,120G,123A,128D,148V,169F,178T,187D,203R,208G,210S
KM048434	ZM1044M	Zambia	06-Sep-2007		genomic RNA	plasma		1	231	6L,14P,15L,27I,31G,33N,41T,49S,71D,83L,116A,120G,128D,148V,169F,178T,187D,203R,208G,210S
KM048435	ZM1044M	Zambia	05-Mar-2008		genomic RNA	plasma		1	231	6L,14P,15L,27I,31G,33N,41T,49S,71D,83L,116A,120G,128D,148V,169F,178T,187D,203R,208G,210S
KM048436	ZM1048F	Zambia	28-Jul-2005		genomic RNA	plasma		1	231	27I,41T,71D,75D,83L,116A,120G,124V,154K,169F,171C,178T,187D,203R,208G,210S
KM048437	ZM1050F	Zambia	15-Sep-2005		genomic RNA	plasma		1	231	6L,14P,15L,27I,29D,41T,71D,83L,86A,87Q,96I,110N,116T,120G,128D,148IV,154K,169F,178T,187D,203R,208G,210S
KM048438	ZM1057F	Zambia	28-Jan-2006		genomic RNA	plasma		1	231	6L,14N,27I,41T,71D,83L,91V,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
KM048439	ZM1057M	Zambia	28-Jan-2006		genomic RNA	plasma		1	231	6L,14N,27I,41T,71D,83L,91V,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
KM048440	ZM1057M	Zambia	29-Apr-2006		genomic RNA	plasma		1	231	6L,14N,27I,41T,71D,83L,91V,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
KM048441	ZM1057M	Zambia	24-Aug-2006		genomic RNA	plasma		1	231	6L,14N,27I,41T,71D,83L,87HQ,91V,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
KM048442	ZM1057M	Zambia	18-Nov-2006		genomic RNA	plasma		1	231	6L,14N,27I,41T,71D,83L,87HQ,91V,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
KM048443	ZM1057M	Zambia	08-Feb-2007		genomic RNA	plasma		1	231	6L,14N,27I,41T,71D,83L,87Q,91V,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
KM048444	ZM1057M	Zambia	26-Jul-2007		genomic RNA	plasma		1	231	6L,14N,27I,41T,71D,83L,87HQ,91V,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
KM048445	ZM1057M	Zambia	02-Feb-2008		genomic RNA	plasma		1	231	6L,14N,27I,41T,71D,83L,87Q,91V,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
KM048446	ZM1065F	Zambia	08-Aug-2006		genomic RNA	plasma		1	231	6L,15L,27I,41T,68I,71D,83T,91V,110N,116A,120S,124T,135IV,148V,154K,169F,178T,180D,187DE,203R,208G,210S,211I,225S
KM048447	ZM1065M	Zambia	04-Aug-2006		genomic RNA	plasma		1	231	6L,15L,27I,41T,68I,71D,83T,91V,110N,116A,120S,124T,135V,148V,154K,169F,178T,180D,203R,208G,210S,211I,225S
KM048448	ZM1065M	Zambia	12-Dec-2006		genomic RNA	plasma		1	231	6L,15L,27I,41T,68I,71D,83T,91V,110N,116A,120S,124T,135V,148V,154K,169F,178T,180D,203R,208G,210S,211I,225S
KM048449	ZM1065M	Zambia	17-May-2007		genomic RNA	plasma		1	231	6L,15L,27I,41T,68I,71D,83T,91V,110N,116A,120S,124T,135V,148V,154K,169F,178T,180D,203R,208G,210S,211I,225S
KM048450	ZM1065M	Zambia	21-Aug-2007		genomic RNA	plasma		1	231	6L,15L,27I,41T,68I,71D,83T,91V,110N,116A,120S,124T,135V,148V,154K,169F,178T,180D,203R,208G,210S,211I,225S
KM048451	ZM1065M	Zambia	29-Apr-2008		genomic RNA	plasma		1	231	6L,15L,27I,41T,68I,71D,83T,91V,110N,116A,120AGST,124T,135IV,148V,154K,169F,178T,180D,187D,203R,208G,210S,211I,225S
KM048452	ZM1065M	Zambia	29-Jul-2008		genomic RNA	plasma		1	231	6L,15L,27I,41T,68I,71D,83T,86IV,91V,96I,110ST,116A,124T,135V,148V,154K,169F,178T,180D,203R,208G,210S,211I,225S
KM048453	ZM1067F	Zambia	06-Aug-2009		genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,91DINV,96IMV,116AT,120S,128D,148V,169F,178T,180D,187D,203R,208G
KM048454	ZM1067M	Zambia	06-Aug-2009		genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,91N,116A,120S,128D,148V,169F,178T,180D,187D,203R,208G
JN014115	ZM106F	Zambia	07-Jun-1998	1	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,128D,148V,169F,178T,187D,203R,208G
JN014116	ZM106F	Zambia	07-Jun-1998	10	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,128D,148V,169F,178T,187D,203R,208G
JN014117	ZM106F	Zambia	07-Jun-1998	11	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,128D,148V,169F,178T,187D,203R,208G
JN014118	ZM106F	Zambia	07-Jun-1998	12	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,128D,148V,169F,178T,187D,203R,208G
JN014119	ZM106F	Zambia	07-Jun-1998	14	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,128D,148V,160S,169F,178T,187D,203R,208G
JN014120	ZM106F	Zambia	07-Jun-1998	15	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,128D,148V,169F,178T,187D,190F,203R,208G
JN014121	ZM106F	Zambia	07-Jun-1998	16	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,128D,148V,169F,178T,187D,203R,208G
JN014122	ZM106F	Zambia	07-Jun-1998	17	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,128D,148V,169F,178T,187D,203R,208G
JN014123	ZM106F	Zambia	07-Jun-1998	18	genomic RNA	plasma		1	231	6L,15F,27I,41T,71D,116A,120S,128D,148V,169F,178T,187D,203R,208G
JN014124	ZM106F	Zambia	07-Jun-1998	2	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,128D,148V,169F,178T,187D,203R,208G
JN014125	ZM106F	Zambia	07-Jun-1998	3	genomic RNA	plasma		1	231	6L,15F,27I,41T,71D,116A,120S,128D,148V,169F,178T,187D,203R,208G
JN014126	ZM106F	Zambia	07-Jun-1998	4	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,128D,148V,169F,178T,187D,203R,208G
JN014127	ZM106F	Zambia	07-Jun-1998	5	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,128D,148V,169F,178T,187D,203R,208G
JN014128	ZM106F	Zambia	07-Jun-1998	6	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,128D,148V,169F,178T,187D,203R,208G
JN014129	ZM106F	Zambia	07-Jun-1998	8	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,128D,148V,169F,178T,187D,203R,208G
JN014130	ZM106F	Zambia	07-Jun-1998	9	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,128D,148V,169F,178T,187D,203R,208G
JN014131	ZM106M	Zambia	07-Jun-1998	10	genomic RNA	plasma		1	231	6L,15L,27I,41T,71D,91V,116A,120S,128D,148V,169F,178T,187D,203R,208G
JN014132	ZM106M	Zambia	07-Jun-1998	11	genomic RNA	plasma		1	231	6L,15L,27I,41T,71D,116T,120S,128D,148V,169F,178T,187D,203R,208G
JN014133	ZM106M	Zambia	07-Jun-1998	12	genomic RNA	plasma		1	231	6L,15L,27I,41T,71D,91V,116A,120S,128D,148V,169F,178T,187D,203R,208G
JN014134	ZM106M	Zambia	07-Jun-1998	13	genomic RNA	plasma		1	231	6L,15L,27I,41T,71D,116T,120S,128D,148V,169F,178T,187D,203R,208G
JN014135	ZM106M	Zambia	07-Jun-1998	14	genomic RNA	plasma		1	231	6L,15L,27I,41T,71D,116T,120S,128D,148V,169F,178T,187D,203R,208G
JN014136	ZM106M	Zambia	07-Jun-1998	15	genomic RNA	plasma		1	231	6L,15L,27I,41T,71D,91V,116A,120S,128D,148V,169F,178T,187D,203R,208G
JN014137	ZM106M	Zambia	07-Jun-1998	17	genomic RNA	plasma		1	231	6L,15L,27I,41T,71D,87P,91V,116A,120S,128D,148V,169F,178T,187D,203R,208G
JN014138	ZM106M	Zambia	07-Jun-1998	18	genomic RNA	plasma		1	231	6L,15L,27I,41T,71D,75K,87Q,116T,120S,128D,132K,148V,166N,169F,175K,178T,187D,203R,208G,214I,215I
JN014139	ZM106M	Zambia	07-Jun-1998	2	genomic RNA	plasma		1	231	6L,15L,27I,41T,71D,116A,120S,128D,148V,169F,178T,187D,203R,208G
JN014140	ZM106M	Zambia	07-Jun-1998	20	genomic RNA	plasma		1	231	6L,15L,27I,41T,71D,116A,120S,128D,148V,169F,178T,187D,203R,208G
JN014141	ZM106M	Zambia	07-Jun-1998	21	genomic RNA	plasma		1	231	6L,15L,27I,41T,71D,116T,120S,128D,148V,169F,178T,187D,203R,208G
JN014142	ZM106M	Zambia	07-Jun-1998	23	genomic RNA	plasma		1	231	6L,15L,27I,41T,71D,116A,120S,128D,148V,169F,178T,187D,203R,208G
JN014143	ZM106M	Zambia	07-Jun-1998	24	genomic RNA	plasma		1	231	6L,15L,27I,41T,71D,91V,116A,120S,128D,148V,169F,178T,187D,203R,208G
JN014144	ZM106M	Zambia	07-Jun-1998	3	genomic RNA	plasma		1	231	6L,15L,27I,41T,71D,116A,120S,128D,148V,169F,178T,187D,203R,208G
JN014145	ZM106M	Zambia	07-Jun-1998	5	genomic RNA	plasma		1	231	6L,15L,27I,41T,71D,91V,116A,120S,128D,148V,169F,178T,187D,203R,208G
JN014146	ZM106M	Zambia	07-Jun-1998	6	genomic RNA	plasma		1	231	6L,15L,27I,41T,71D,116A,120S,128D,148V,169F,178T,187D,203R,208G
JN014147	ZM106M	Zambia	07-Jun-1998	7	genomic RNA	plasma		1	231	6L,15L,27I,41T,71D,116T,120S,128D,148V,169F,178T,203R,208G
JN014148	ZM106M	Zambia	07-Jun-1998	8	genomic RNA	plasma		1	231	6L,15L,27I,41T,71D,116T,120S,128D,148V,169F,178T,187D,203R,208G
JN014149	ZM106M	Zambia	07-Jun-1998	9	genomic RNA	plasma		1	231	6L,15L,27I,41T,71D,116T,120S,128D,148V,169F,178T,187D,203R,208G
KM048455	ZM1076M	Zambia	28-Oct-2006		genomic RNA	plasma		1	231	27I,41T,71D,83L,86A,87Q,96I,116T,118I,120G,148V,154K,169F,178T,187D,199R,200N,203R,208G,225S
KM048456	ZM1076M	Zambia	08-Dec-2006		genomic RNA	plasma		1	231	27I,41T,71D,83L,86A,87Q,96I,116T,118I,120G,148V,154K,169F,178T,187D,199R,200N,203R,208G,225S
KM048457	ZM1076M	Zambia	02-Mar-2007		genomic RNA	plasma		1	231	27I,41T,71D,83L,86A,87Q,96I,116T,118I,120G,148V,154K,169F,178T,180DE,187D,199R,200N,203R,208G,225S
KM048458	ZM1076M	Zambia	26-May-2007		genomic RNA	plasma		1	231	27I,41T,71D,83L,86A,87Q,96I,116T,118I,120G,148V,154K,169F,178ST,180DE,187D,199R,200N,203R,208G,225S
KM048459	ZM1076M	Zambia	09-Nov-2007		genomic RNA	plasma		1	231	27I,41T,71D,83L,86A,87Q,96I,116T,118I,120G,148V,154K,169F,178ST,180DE,187D,199R,200N,203R,208G,225S
KM048460	ZM1076M	Zambia	26-Apr-2008		genomic RNA	plasma		1	231	27I,41T,71D,83L,86A,87Q,96I,116T,118I,120G,148V,154K,169F,178ST,180DE,187D,199R,200N,203R,205LM,208G,225S
KM048461	ZM1076M	Zambia	28-Oct-2008		genomic RNA	plasma		1	231	27I,41T,71D,83L,86A,87Q,96I,107ST,116T,118I,120G,148V,154K,169F,178AST,180DE,187D,199R,200N,203R,205LM,208G,225S
KM048462	ZM1078F	Zambia	01-Dec-2005		genomic RNA	plasma		1	231	6H,14P,15L,27I,41T,71D,83L,91V,110N,116A,120A,121A,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
KM048463	ZM1079M	Zambia	09-Sep-2005		genomic RNA	plasma		1	231	6L,15L,27I,41T,71D,116A,124V,148V,169F,178T,187D,203R,208G,210S,225S
KM048465	ZM1082F	Zambia	13-Sep-2006		genomic RNA	plasma		1	231	6L,27I,33CS,41T,71D,83L,91N,96I,116T,120S,128D,148V,169F,178T,180D,203R,208G
KM048466	ZM1082F	Zambia	17-Jan-2007		genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,91N,96I,116T,120S,128D,148V,169F,178T,180D,203R,208G
KM048467	ZM1082F	Zambia	11-Apr-2007		genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,91N,96I,116T,120S,128D,148V,169F,178T,180D,203R,208G
KM048468	ZM1082F	Zambia	22-Sep-2007		genomic RNA	plasma		1	231	6L,27I,41T,50KPQT,71D,83L,91N,96I,116T,120S,128D,148V,169F,178T,180D,203R,208G
KM048469	ZM1082F	Zambia	13-Mar-2008		genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,91N,96I,116T,120S,128D,148V,169F,178T,180D,203R,208G
KM048470	ZM1082F	Zambia	02-Aug-2008		genomic RNA	plasma		1	231	6L,27I,41T,50*PQS,71D,83L,91N,96I,116T,120S,128D,148V,169F,178T,180D,203R,208G
KM048464	ZM1082M	Zambia	13-Sep-2006		genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,87HP,91IN,96I,116T,120S,128D,148V,169F,171AITV,178T,180D,203R,208G,225S
KM048472	ZM1094F	Zambia	04-Jul-2008		genomic RNA	plasma		1	231	14P,15L,27I,41T,71D,83L,116A,120S,128D,148V,154K,169F,178T,187D,200N,203R,208G,225S
KM048471	ZM1094M	Zambia	04-Jul-2008		genomic RNA	plasma		1	231	14P,15ILM,27I,41T,71D,83IL,91AITV,96IM,116AT,120S,128D,148V,154K,169F,178T,187D,200NT,203R,208G,225S
KM048473	ZM1095F	Zambia	26-Aug-2005		genomic RNA	plasma		1	231	6L,27IV,41T,50*Q,54S,58A,71D,83L,91V,95A,96LM,110N,115V,116A,120A,124IV,128D,148V,160PS,169F,178T,180D,187D,203R,208G,225S
JN014150	ZM109F	Zambia	16-Mar-2000	1	genomic RNA	plasma		1	231	6L,14P,27I,41T,71N,83L,87Q,91V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
JN014151	ZM109F	Zambia	16-Mar-2000	12	genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,87Q,91V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
JN014152	ZM109F	Zambia	16-Mar-2000	13	genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,87Q,91V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
JN014153	ZM109F	Zambia	16-Mar-2000	14	genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,87Q,91V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
JN014154	ZM109F	Zambia	16-Mar-2000	15	genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,87Q,91V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
JN014155	ZM109F	Zambia	16-Mar-2000	16	genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,87Q,91V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
JN014156	ZM109F	Zambia	16-Mar-2000	17	genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,87Q,91V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
JN014157	ZM109F	Zambia	16-Mar-2000	18	genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,87Q,91V,104V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
JN014158	ZM109F	Zambia	16-Mar-2000	19	genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,87Q,91V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
JN014159	ZM109F	Zambia	16-Mar-2000	2	genomic RNA	plasma		1	231	6L,8R,14P,23*,27I,41T,71D,80*,83L,87Q,91V,100K,116A,117*,120S,128D,133*,137K,148V,154K,156R,162K,169F,178T,180D,184*,187D,203R,206R,208E,210S,213K,220R,222R,225S,229K
JN014160	ZM109F	Zambia	16-Mar-2000	21	genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,87Q,91V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
JN014161	ZM109F	Zambia	16-Mar-2000	22	genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,87Q,91V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
JN014162	ZM109F	Zambia	16-Mar-2000	23	genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,87Q,91V,97S,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
JN014163	ZM109F	Zambia	16-Mar-2000	24	genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,87Q,91V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
JN014164	ZM109F	Zambia	16-Mar-2000	25	genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,87Q,91V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
JN014165	ZM109F	Zambia	16-Mar-2000	26	genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,87Q,91V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
JN014166	ZM109F	Zambia	16-Mar-2000	3	genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,87Q,91V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
JN014167	ZM109F	Zambia	16-Mar-2000	6	genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,87Q,91V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
JN014168	ZM109F	Zambia	16-Mar-2000	7	genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,87Q,91V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
JN014169	ZM109F	Zambia	16-Mar-2000	8	genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,87Q,91V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
JN014170	ZM109F	Zambia	16-Mar-2000	9	genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,87Q,91V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
JN014171	ZM109M	Zambia	16-Mar-2000	1	genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,87Q,91V,116A,120S,128D,148V,154K,169F,170R,178T,180D,187D,200N,203R,208G,210S,225S
JN014172	ZM109M	Zambia	16-Mar-2000	10	genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,87Q,91V,116A,120S,128D,148V,154K,169F,170R,178T,180D,187D,203R,208G,210S,225S
JN014173	ZM109M	Zambia	16-Mar-2000	11	genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,87Q,91V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
JN014174	ZM109M	Zambia	16-Mar-2000	12	genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,87Q,91V,116A,120S,128D,148V,154K,169F,170R,178T,180D,187D,200N,203R,208G,210S,225S
JN014175	ZM109M	Zambia	16-Mar-2000	13	genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,87Q,91V,116A,120S,128D,148V,154K,169F,170R,178T,180D,187D,203R,208G,210S,225S
JN014176	ZM109M	Zambia	16-Mar-2000	14	genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,87Q,91V,116A,120S,128D,148V,154K,169F,170R,178T,180D,187D,191I,203R,208G,210S,225S
JN014177	ZM109M	Zambia	16-Mar-2000	15	genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,87Q,91V,116A,120S,128D,148V,154K,169F,170R,178T,180D,187D,200N,203R,208G,210S,225S
JN014178	ZM109M	Zambia	16-Mar-2000	16	genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,87Q,91V,116A,120S,128D,148V,154K,169F,170R,178T,180D,187D,203R,208G,210S,225S
JN014179	ZM109M	Zambia	16-Mar-2000	17	genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,87Q,91V,116A,120S,128D,148V,154K,169F,170R,178T,180D,187D,200N,203R,208G,210S,225S
JN014180	ZM109M	Zambia	16-Mar-2000	18	genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,87Q,91V,116A,120S,128D,148V,154K,169F,170R,178T,180D,187D,203R,208G,210S,225S
JN014181	ZM109M	Zambia	16-Mar-2000	2	genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,87Q,91V,116A,120S,128D,148V,154K,169F,170R,178T,180D,187D,203R,208G,210S,225S
JN014182	ZM109M	Zambia	16-Mar-2000	20	genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,87Q,91V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
JN014183	ZM109M	Zambia	16-Mar-2000	21	genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,87Q,91V,116A,120S,128D,148V,154K,169F,170R,178T,180D,187D,203R,208G,210S,225S
JN014184	ZM109M	Zambia	16-Mar-2000	22	genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,87Q,91V,116A,120S,128D,148V,154K,169F,170R,178T,180D,187D,203R,208G,210S,225S
JN014185	ZM109M	Zambia	16-Mar-2000	23	genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,87Q,91V,116A,120S,128D,148V,154K,169F,170R,178T,180D,187D,200N,203R,208G,210S,225S
JN014186	ZM109M	Zambia	16-Mar-2000	24	genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,87Q,91V,116A,120S,128D,148V,154K,169F,170R,178T,180D,187D,203R,208G,210S,225S
JN014187	ZM109M	Zambia	16-Mar-2000	25	genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,87Q,91V,116A,120S,128D,148V,154K,169F,170R,178T,180D,187D,200N,203R,208G,210S,225S
JN014188	ZM109M	Zambia	16-Mar-2000	4	genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,87Q,91V,116A,120S,128D,148V,154K,169F,170R,178T,180D,187D,203R,208G,210S,225S
JN014189	ZM109M	Zambia	16-Mar-2000	5	genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,87Q,91V,116T,120S,128D,148V,154K,169F,170R,178T,180D,187D,203R,208G,210S,225S
JN014190	ZM109M	Zambia	16-Mar-2000	6	genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,87Q,91V,116A,120S,128D,148V,154K,169F,170R,178T,180D,187D,203R,208G,210S,225S
JN014191	ZM109M	Zambia	16-Mar-2000	8	genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,87Q,91V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
KM048474	ZM1100M	Zambia	15-Sep-2005		genomic RNA	plasma		1	231	6L,27I,31G,33N,41T,71D,83M,84N,91V,96I,115V,116T,120S,135V,136M,148V,154K,160S,169F,178T,187D,203R,208G
KM048475	ZM1116F	Zambia	14-Sep-2005		genomic RNA	plasma		1	231	6L,14P,15L,16T,27I,41T,71D,83L,91V,110N,116A,120G,124V,148V,154K,169F,178T,187D,203KR,204G,207Q,208G,210S
KM048476	ZM1117F	Zambia	13-Sep-2005		genomic RNA	plasma		1	231	6L,27I,50T,71D,83L,91V,116A,120S,128D,148V,154K,169F,170R,178T,180D,187D,203R,208G,210S
KM048477	ZM1123F	Zambia	15-May-2008		genomic RNA	plasma		1	231	6L,14AT,15L,27I,41T,50AV,71D,83L,87HQ,91V,116A,120S,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
KM048478	ZM1123M	Zambia	12-Apr-2008		genomic RNA	plasma		1	231	6L,14T,15L,27I,41T,50V,71D,83L,87Q,91V,116A,120S,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
KM048480	ZM1124F	Zambia	18-May-2006		genomic RNA	plasma		1	231	6L,27I,29D,41T,71D,83L,94N,96I,116T,120S,124V,128D,148V,169F,178T,180D,187D,191I,207Q,208G,210S
KM048481	ZM1124F	Zambia	02-Aug-2006		genomic RNA	plasma		1	231	6L,27I,29D,41T,71D,83L,94N,96I,116T,120S,124V,128D,148V,169F,178T,180D,187D,191I,207Q,208G,210S
KM048482	ZM1124F	Zambia	12-Dec-2006		genomic RNA	plasma		1	231	6L,27I,29D,41T,71D,83L,94N,96I,116T,120S,124V,128D,148V,169F,178T,180DE,187D,191I,207Q,208G,210S
KM048483	ZM1124F	Zambia	03-Mar-2007		genomic RNA	plasma		1	231	6L,27I,29D,41T,71D,83L,94N,96I,116T,120S,124V,128D,148V,169F,178T,180D,187D,191I,207Q,208G,210S
KM048484	ZM1124F	Zambia	29-May-2007		genomic RNA	plasma		1	231	6L,27I,29D,41T,71D,83L,94N,96I,116T,120S,124V,128D,148V,169F,178T,180D,187D,191I,207Q,208G,210S
KM048485	ZM1124F	Zambia	13-Nov-2007		genomic RNA	plasma		1	231	6L,27I,29D,41T,71D,83L,94N,96I,116T,120S,124V,128D,148V,169F,178T,180D,187D,191I,207Q,208G,210S
KM048486	ZM1124F	Zambia	30-Apr-2008		genomic RNA	plasma		1	231	6L,27I,29D,41T,71D,83L,94N,96I,116T,120S,124V,128D,148V,169F,178T,180DE,187D,191I,207PQ,208G,210S
KM048479	ZM1124M	Zambia	18-May-2006		genomic RNA	plasma		1	231	6L,27I,29D,41T,71D,83L,94N,96I,116T,120S,124IV,128D,148V,169F,178T,180D,187D,191I,207Q,208G,210S
KM048487	ZM1128F	Zambia	28-Jul-2005		genomic RNA	plasma		1	231	4R,6L,27I,31G,41T,45D,54S,58I,71D,74T,83L,96I,100T,102N,107A,116T,120A,128D,135V,136M,148V,154K,163E,169F,177S,187D,191I,207Q,208G,210S
KM048488	ZM1135F	Zambia	01-Sep-2005		genomic RNA	plasma		1	231	6L,14P,15M,27I,31N,41L,59I,71D,83L,87Q,91N,92P,94N,96I,110N,116T,120S,128D,135V,148V,154K,169F,177S,178T,187D,203R,208G
KM048489	ZM1138F	Zambia	14-Sep-2005		genomic RNA	plasma		1	231	6L,27I,36I,41T,71D,83L,86A,87Q,91V,96I,98D,116T,120S,128D,148V,169F,178T,180D,187D,203R,208G,210S
KM048490	ZM1143M	Zambia	09-Sep-2005		genomic RNA	plasma		1	231	6L,27I,41T,71D,91V,116A,120S,124V,148V,169F,178T,187D,203R,208G,225S
KM048491	ZM1150F	Zambia	05-Aug-2005		genomic RNA	plasma		1	231	6L,27I,33NS,41T,50*HQY,54ST,58AT,71D,83L,91V,116A,120G,125A,148V,169F,178T,180D,187D,203R,208G
KM048492	ZM1154F	Zambia	27-Aug-2005		genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,87Q,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,210S,225S
KM048493	ZM1163M	Zambia	10-Sep-2005		genomic RNA	plasma		1	231	6A,13T,14P,16T,27I,31N,41T,71D,83L,91V,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S
KM048494	ZM1165F	Zambia	16-Mar-2006		genomic RNA	plasma		1	231	6L,27I,36I,41T,71D,83L,112A,116A,124V,128D,148V,169F,171V,178T,180D,187D,207S,208G,225S
KM048495	ZM1165M	Zambia	16-Mar-2006		genomic RNA	plasma		1	231	6L,27I,36I,41T,71D,83L,112A,116A,124V,128D,148V,169F,171V,178T,180D,187D,207S,208G,225S
KM048496	ZM1165M	Zambia	10-Jun-2006		genomic RNA	plasma		1	231	6L,27I,36I,41T,71D,83L,112A,116A,124V,128D,148V,169F,171V,178T,180D,187D,207S,208G,225S
KM048497	ZM1165M	Zambia	18-Oct-2006		genomic RNA	plasma		1	231	6L,27I,36I,41T,71D,83L,112A,116A,124V,128D,148V,169F,171V,178T,180D,187D,207S,208G,225S
KM048498	ZM1165M	Zambia	10-Jan-2007		genomic RNA	plasma		1	231	6L,27I,36I,41T,71D,83L,112A,116A,124V,128D,148V,169F,171V,178T,180D,187D,207S,208G,225S
KM048499	ZM1165M	Zambia	10-Apr-2007		genomic RNA	plasma		1	231	6L,27I,36I,41T,71D,83L,112A,116A,124V,128D,148V,169F,171V,178T,180D,187D,207S,208G,225S
KM048500	ZM1165M	Zambia	18-Sep-2007		genomic RNA	plasma		1	231	6L,27I,36I,41T,71D,83L,112A,116A,120NS,124V,128D,148V,169F,171V,178T,180D,187D,207S,208G,225S
KM048501	ZM1165M	Zambia	25-Mar-2008		genomic RNA	plasma		1	231	6L,27I,36I,41T,71D,83L,85PS,112A,116A,120NS,124V,128D,148V,154K,169F,171V,178T,180D,187D,207S,208G,225S
KM048502	ZM1166F	Zambia	04-Feb-2006		genomic RNA	plasma		1	231	6L,14PS,15L,27I,41T,50T,71D,83L,86AV,87Q,91V,96I,110N,116T,120S,128D,136M,148V,154K,169F,178T,180D,187D,203R,208G,225S
KM048503	ZM1166M	Zambia	04-Feb-2006		genomic RNA	plasma		1	231	6L,14P,15L,27I,41T,50T,71D,83L,87Q,91V,96I,110N,116T,120S,128D,136M,148V,154K,169F,178T,180D,187D,203R,208G,225S
KM048504	ZM1166M	Zambia	11-May-2006		genomic RNA	plasma		1	231	6L,14P,15L,27I,41T,50T,71D,83L,87Q,91V,96I,110N,116T,120S,128D,136M,148V,154K,169F,178T,180D,187D,203R,208G,225S
KM048505	ZM1166M	Zambia	12-Aug-2006		genomic RNA	plasma		1	231	6L,14P,15L,27I,41T,50T,71D,83L,87Q,91V,96I,110N,116T,120S,128D,136M,148V,154K,169F,178T,180D,187D,203R,208G,225S
KM048506	ZM1166M	Zambia	23-Nov-2006		genomic RNA	plasma		1	231	6L,14PS,15L,27I,41T,50T,71D,83L,87Q,91V,96I,110NT,116T,120NS,128D,136M,148V,154K,169F,178T,180D,187D,203R,208G,225S
KM048507	ZM1166M	Zambia	14-Feb-2007		genomic RNA	plasma		1	231	6L,14S,15L,27I,41T,50T,71D,83L,87Q,91V,96I,116T,120NS,128D,136M,148V,154K,169F,178T,180D,187D,203R,208G,225S
KM048508	ZM1166M	Zambia	02-Aug-2007		genomic RNA	plasma		1	231	6L,14S,15L,27I,41T,50T,71D,83L,87Q,91V,96I,116T,128D,136M,148V,154K,169F,178T,180D,187D,203R,208G,225S
KM048509	ZM1166M	Zambia	16-Feb-2008		genomic RNA	plasma		1	231	6L,14S,15L,27I,41T,50T,71D,83L,86AV,87Q,91V,96I,116T,120NS,128D,136M,148V,154K,169F,178T,180D,187D,203R,208G,225S
KM048510	ZM1167M	Zambia	10-Apr-2007		genomic RNA	plasma		1	231	6L,14S,15L,27I,41T,71D,83T,116A,128D,148V,169F,178T,187D,203R,208G
KM048511	ZM1167M	Zambia	11-Aug-2007		genomic RNA	plasma		1	231	6L,14S,15L,27I,41T,71D,83T,96IM,116A,128D,148V,169F,178T,187D,203R,208G
KM048512	ZM1167M	Zambia	01-Nov-2007		genomic RNA	plasma		1	231	6L,14S,15L,27I,41T,71D,83T,116A,128D,148V,169F,178T,187D,203R,208G
KM048513	ZM1167M	Zambia	29-Apr-2008		genomic RNA	plasma		1	231	6L,14S,15L,27I,41T,71D,83T,96IM,116A,128D,148V,169F,178T,187D,203R,208G
KM048514	ZM1167M	Zambia	04-Oct-2008		genomic RNA	plasma		1	231	6L,14S,15L,27I,41T,71D,83T,96IM,116A,128D,148V,169F,178T,187D,203R,208G
KM048515	ZM1167M	Zambia	31-Mar-2009		genomic RNA	plasma		1	231	6L,14AS,15L,27I,41T,71D,83T,96IM,116A,128D,148V,169F,178T,187D,203R,208G
KM048516	ZM1172F	Zambia	18-Aug-2005		genomic RNA	plasma		1	231	6L,14P,27I,31G,33N,41T,71D,83L,87Q,96I,115V,116A,120S,123A,128D,148V,154K,169F,178T,183G,187D,203R,208G,225S
KM048517	ZM1180F	Zambia	21-Apr-2006		genomic RNA	plasma		1	231	6L,14P,16A,17A,41T,71D,83L,87Q,110N,116A,120A,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S
KM048518	ZM1180M	Zambia	21-Apr-2006		genomic RNA	plasma		1	231	6L,14P,15M,16T,41T,71D,83L,87Q,110N,116A,120A,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S
KM048519	ZM1180M	Zambia	15-Jul-2006		genomic RNA	plasma		1	231	6L,14P,15M,16T,27IV,41T,71D,83L,87Q,110N,116A,120A,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S
KM048520	ZM1180M	Zambia	14-Nov-2006		genomic RNA	plasma		1	231	6L,14P,15M,16T,27I,41T,71D,83L,87Q,110N,116A,120A,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S
KM048521	ZM1180M	Zambia	20-Feb-2007		genomic RNA	plasma		1	231	6L,14P,15M,16T,27I,41T,71D,83L,87Q,110N,116A,120A,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S
KM048522	ZM1180M	Zambia	08-May-2007		genomic RNA	plasma		1	231	6L,14P,15L,16T,27I,41T,71D,83L,110N,116A,120A,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S
KM048523	ZM1180M	Zambia	13-Oct-2007		genomic RNA	plasma		1	231	6L,14P,15M,16T,27I,41T,71D,83L,110N,116A,120A,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S
KM048524	ZM1180M	Zambia	11-Mar-2008		genomic RNA	plasma		1	231	6L,14P,15LM,16T,27I,41T,71D,83L,110N,116A,120A,128D,148V,154K,169F,178T,180DE,187D,203R,208G,210S
KM048525	ZM1188F	Zambia	27-Aug-2005		genomic RNA	plasma		1	231	6L,27I,41T,50A,71D,83L,92V,93Q,116A,120S,128D,148V,154K,180D,204G,207Q,208G,210S,225S
KM048526	ZM1194F	Zambia	30-Aug-2005		genomic RNA	plasma		1	231	6L,14P,15L,27I,41T,71D,83L,96AV,116T,120G,128D,148V,169F,178T,180D,203R
KM048528	ZM1209F	Zambia	23-Aug-2008		genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,91V,115V,120S,128D,148V,169F,178T,203R,225S
KM048527	ZM1209M	Zambia	23-Aug-2008		genomic RNA	plasma		1	231	6L,27I,41ST,71D,83L,91V,115V,120S,128D,148V,169F,178T,203R,225S
KM048529	ZM1230M	Zambia	20-Aug-2005		genomic RNA	plasma		1	231	6A,27I,33N,41T,71D,83L,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S
KM048530	ZM1247F	Zambia	19-Aug-2005		genomic RNA	plasma		1	231	6L,15L,27I,41T,71D,83L,115V,116A,120S,124V,148V,154K,169F,178T,187D,200N,203R,208G,210S,225S
KM048531	ZM1249F	Zambia	01-Sep-2005		genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,96L,116A,124V,128D,148V,154K,169F,170R,178T,187D,200L,203R,204G,208G
KM048532	ZM1286F	Zambia	17-Jun-2008		genomic RNA	plasma		1	231	41T,50*PQS,54M,71D,86P,87Q,91V,96I,98D,116T,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
KM048533	ZM1286M	Zambia	09-May-2008		genomic RNA	plasma		1	231	41T,54M,71D,86P,87Q,91V,96I,98D,116T,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
KM048535	ZM1317F	Zambia	13-Dec-2005		genomic RNA	plasma		1	231	6L,15IL,27I,41T,71D,78AV,83T,86AV,87Q,91V,96IM,107AT,116A,120S,124V,148V,154KR,169F,178T,183G,187DE,203R,208G,225S
KM048536	ZM1317M	Zambia	13-Dec-2005		genomic RNA	plasma		1	231	6L,27I,41T,71D,78V,83T,86A,87Q,91V,116A,120S,124V,148V,154K,169F,178T,183G,187D,203R,208G,225S
KM048537	ZM1317M	Zambia	12-Apr-2006		genomic RNA	plasma		1	231	6L,27I,41T,71D,78V,83T,86A,87Q,91V,116A,120S,124V,148V,154K,169F,178T,183G,187D,203R,208G,225S
KM048538	ZM1317M	Zambia	15-Jul-2006		genomic RNA	plasma		1	231	6L,27I,41T,71D,78V,83T,86A,87Q,91V,116A,120S,124V,148V,154K,169F,178T,183G,187D,203R,208G,225S
KM048539	ZM1317M	Zambia	28-Oct-2006		genomic RNA	plasma		1	231	6L,27I,41T,71D,78V,83T,86A,87Q,91V,116A,120S,124V,148V,154K,169F,178T,183G,187D,203R,208G,225S
KM048540	ZM1317M	Zambia	20-Jan-2007		genomic RNA	plasma		1	231	6L,27I,41T,71D,78V,83T,86A,87Q,91V,116A,120S,124V,148V,154K,169F,178T,183G,187D,203R,208G,225S
KM048541	ZM1317M	Zambia	07-Jul-2007		genomic RNA	plasma		1	231	6L,27I,41T,71D,78V,83T,86A,87Q,91V,116A,120S,124V,148V,154K,169F,178T,183G,187D,203R,208G,225S
KM048542	ZM1317M	Zambia	15-Jan-2008		genomic RNA	plasma		1	231	6L,27I,41T,71D,78V,83T,86A,87Q,91V,98DE,116A,120GS,124V,148V,154K,169F,178T,183G,187D,203R,208G,225S
JN014192	ZM135F	Zambia	18-Jun-1998	1	genomic RNA	plasma		1	231	6L,41T,75D,83L,116A,120S,128D,148V,169F,178T,180D,190M,191I,200I,204G,208G
JN014193	ZM135F	Zambia	18-Jun-1998	2	genomic RNA	plasma		1	231	6L,23*,41T,71D,80*,83L,89R,116A,120S,128D,148V,169F,178T,180D,187D,190M,191I,200I,203R,204G,208E
JN014194	ZM135F	Zambia	18-Jun-1998	4	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,91V,116A,120S,128D,148V,169F,178T,180D,187D,200I,203R,204G,208G
JN014195	ZM135F	Zambia	18-Jun-1998	5	genomic RNA	plasma		1	231	6L,41T,75D,83L,116A,120S,128D,148V,169F,178T,180D,190M,191I,200I,204G,208G
KM049003	ZM135F	Zambia	07-Aug-1999		genomic RNA	plasma		1	231	6L,23*W,27IV,41T,71DE,75DE,80*W,83L,89GR,91IV,116A,120S,128D,148V,169F,178T,180D,187DE,190LM,191IV,200I,203KR,204G,208EG
JN014196	ZM135M	Zambia	18-Jun-1998	1	genomic RNA	plasma		1	231	6L,41T,75D,83L,116A,120S,128D,148V,169F,178T,180D,190M,191I,200I,204G,208G
JN014197	ZM135M	Zambia	18-Jun-1998	2	genomic RNA	plasma		1	231	6L,41T,75D,83L,116A,120S,128D,148V,169F,178T,180D,190M,191I,200I,204G,208G
JN014198	ZM135M	Zambia	18-Jun-1998	3	genomic RNA	plasma		1	231	6L,41T,75D,83L,116A,120S,128D,148V,169F,178T,180D,190M,191I,200I,204G,208G
JN014199	ZM135M	Zambia	18-Jun-1998	4	genomic RNA	plasma		1	231	6F,41T,75D,83L,116A,120S,128D,148V,169F,178T,180D,190M,191I,200I,204G,208G
JN014200	ZM135M	Zambia	18-Jun-1998	5	genomic RNA	plasma		1	231	6L,41T,75D,83L,116A,120S,128D,148V,169F,178T,180D,190M,191I,200I,204G,208G
JN014201	ZM135M	Zambia	18-Jun-1998	6	genomic RNA	plasma		1	231	6L,41T,75D,83L,116A,120S,128D,148V,169F,178T,180D,190M,191I,200I,204G,208G
JN014202	ZM135M	Zambia	18-Jun-1998	7	genomic RNA	plasma		1	231	6L,41T,75D,83L,116A,120S,128D,148V,169F,178T,180D,190M,191I,200I,204G,208G
JN014203	ZM135M	Zambia	18-Jun-1998	8	genomic RNA	plasma		1	231	6L,41T,75D,83L,116A,120S,128D,148V,169F,178T,180D,190M,191I,200I,204G,208G
KM048534	ZM13F	Zambia	12-Sep-1999		genomic RNA	plasma		1	231	6L,11M,14P,15L,27I,41T,71D,83L,110N,116A,128D,148V,154K,169F,177S,187D,203R,208G,210S
KM048543	ZM1413F	Zambia	10-Aug-2007		genomic RNA	plasma		1	231	6L,15L,41T,50G,59I,71D,83T,91V,116A,120S,124V,135V,148V,154K,169F,171V,178T,183HN
KM048544	ZM1413M	Zambia	13-Jun-2007		genomic RNA	plasma		1	231	6L,15L,41T,50G,59I,71D,83T,91V,116A,120S,124V,135V,148V,154K,169F,171V,178T,183H
KM048545	ZM1413M	Zambia	24-Apr-2008		genomic RNA	plasma		1	231	6L,15L,41T,50G,59I,71D,83T,91V,116A,120S,124V,135V,148V,154K,169F,171V,178T,183HN
KM048546	ZM1413M	Zambia	23-Jul-2008		genomic RNA	plasma		1	231	6L,15L,41T,50G,59I,71D,83T,91V,116A,120S,124V,135V,148V,154K,169F,171V,178T
KM048547	ZM1413M	Zambia	10-Jan-2009		genomic RNA	plasma		1	231	6L,15L,41T,50G,59I,71D,83T,91V,116A,120S,124V,135V,148V,154K,169F,171V,178T
KM048548	ZM1413M	Zambia	16-Jun-2009		genomic RNA	plasma		1	231	6L,15L,41T,50G,59I,71D,83T,91V,116A,120S,124V,135V,148V,154K,169F,171V,178T
KM048549	ZM1439F	Zambia	01-Dec-2005		genomic RNA	plasma		1	231	6A,14P,15L,27I,41T,71D,83L,91V,96L,110N,116A,128D,148V,154K,169F,178T,180D,187D,203R,208G
KM048550	ZM1440F	Zambia	07-Dec-2005		genomic RNA	plasma		1	231	6L,14H,15M,27I,31G,33N,41T,71D,116A,120S,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
KM048551	ZM1443M	Zambia	09-Dec-2005		genomic RNA	plasma		1	231	6L,15L,27I,36I,41T,71D,91A,110N,116A,120S,128D,148V,154KR,169F,178T,183DGNS,187D,203R,208G,225S
KM048552	ZM1445F	Zambia	10-Dec-2005		genomic RNA	plasma		1	231	4QR,6L,19ST,33N,58A,75D,83L,102T,116A,120S,128D,148V,169F,178T,183NT,200N,203R,208G
KM048554	ZM1450M	Zambia	21-Dec-2005		genomic RNA	plasma		1	231	6H,14P,27I,41T,50G,71D,83L,111P,116A,120G,128D,135V,148V,154K,169F,178T,180D,187D,196PS,203R,208G,210S
KM048555	ZM1454F	Zambia	10-Jan-2006		genomic RNA	plasma		1	231	3I,6P,11I,14P,15L,16T,27I,41T,50S,71D,83T,91V,116A,120S,124IV,148V,169F,178T,180DE,187DEKN,203R,208G,225S
KM048556	ZM1455M	Zambia	05-Jan-2006		genomic RNA	plasma		1	231	6L,9HQ,13HKNQ,14P,27I,41T,71D,79DE,83L,91V,96LM,110NT,112AEPQ,116A,120HR,124V,128D,148V,152DE,154K,169F,177AS,178T,180D,187DE,203R,208G,210S,225S
KM048553	ZM145F	Zambia	18-Feb-2000		genomic RNA	plasma		1	231	6L,27I,50V,71D,83L,86T,87Q,91L,92P,96I,116T,120S,128D,136M,148V,154K,169F,178T,187D,203R,204G,208G,210S,225S
KM048557	ZM1469F	Zambia	08-Mar-2006		genomic RNA	plasma		1	231	6L,14P,15L,27I,41T,71D,83L,110N,116A,120S,128D,148V,154K,169F,178T,187D,203R,208G,210S
KM048559	ZM1480F	Zambia	24-Apr-2007		genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,87Q,91V,116A,120G,128D,148V,154K,169F,177S,178T,187D,203R,207T,208G
KM048560	ZM1480F	Zambia	31-Jul-2007		genomic RNA	plasma		1	231	6L,14AP,21NS,27I,41T,71D,83L,87HQ,91A,112PQ,116A,118IM,120G,128D,148V,154K,160PS,169F,177S,178T,187D,203R,207PT,208G
KM048558	ZM1480M	Zambia	24-Apr-2007		genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,87HQ,91V,116A,120G,128D,148V,154K,169F,177S,178T,187D,203R,207T,208G
KM048562	ZM1494F	Zambia	18-Nov-2006		genomic RNA	plasma		1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,154K,169F,170R,171I,180D,187D,203R,208G,210N,225S
KM048563	ZM1494F	Zambia	29-Mar-2007		genomic RNA	plasma		1	231	1PT,6L,27I,41T,71D,83I,116A,120S,124V,148V,154K,169F,170R,171AITV,180D,187D,203R,208G,210N,225S
KM048564	ZM1494F	Zambia	19-Jun-2007		genomic RNA	plasma		1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,154K,169F,170R,180D,187D,203R,208G,210N,225S
KM048565	ZM1494F	Zambia	11-Sep-2007		genomic RNA	plasma		1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,154K,169F,170R,180D,187D,203R,208G,210N,225S
KM048566	ZM1494F	Zambia	06-Dec-2007		genomic RNA	plasma		1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,154K,169F,170R,180D,187D,203R,208G,210N,225S
KM048567	ZM1494F	Zambia	22-May-2008		genomic RNA	plasma		1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,154K,169F,170R,178T,180D,187D,203R,208G,210N,225S
KM048568	ZM1494F	Zambia	21-Nov-2008		genomic RNA	plasma		1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,154K,169F,170R,178T,180D,187D,203R,208G,210N,225S
KM048561	ZM1494M	Zambia	18-Nov-2006		genomic RNA	plasma		1	231	6L,27I,41T,71D,83I,116A,120G,124V,128D,148V,154K,169F,170R,171I,180D,187D,203R,208G,210N,225S
KM048573	ZM1505F	Zambia	03-May-2006		genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,96IM,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
KM048569	ZM150F	Zambia	22-Mar-2001		genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,107S,116A,120A,124V,128D,148V,169F,178T,180D,203R
KM048570	ZM150F	Zambia	20-Sep-2001		genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,107S,116A,120A,124V,128D,148V,169F,178T,180D,203R
KM048571	ZM150F	Zambia	21-Mar-2002		genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,107S,116A,120A,124V,128D,148V,169F,178T,180D,203R
KM048572	ZM150F	Zambia	19-Sep-2002		genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,107ST,116AT,120A,124V,128D,148V,169F,178T,180D,203R
KM048575	ZM1511F	Zambia	09-Jan-2007		genomic RNA	plasma		1	231	6L,11I,14P,27I,31G,41T,50H,71D,83L,91N,92P,93A,108S,116A,120S,128D,148V,154K,169F,178T,180D,187D,190I,207S,208G,225S
KM048576	ZM1511M	Zambia	07-Dec-2006		genomic RNA	plasma		1	231	6L,11I,14P,15M,27I,31G,41T,50H,71D,83L,91N,92P,93A,108S,116A,120S,128D,148V,154K,169F,178T,180D,187D,207A,208G,225S
KM048577	ZM1511M	Zambia	24-Mar-2007		genomic RNA	plasma		1	231	6L,11I,14P,15IM,16ST,27I,31G,41T,50H,71D,83L,91N,92P,93A,108S,116A,120S,128D,148V,154K,169F,178T,180D,187D,207A,208G,225S
KM048578	ZM1515F	Zambia	09-Nov-2006		genomic RNA	plasma		1	231	6F,27I,31G,33N,41T,52I,71D,83L,87Q,91V,115V,116A,120S,124V,128D,132K,136M,148V,154K,169F,178T,180D,187D,203R,208G
KM048579	ZM1515M	Zambia	09-Nov-2006		genomic RNA	plasma		1	231	6F,27I,31G,33N,41T,52I,71D,83L,87Q,91V,110NT,112PQ,115V,116A,120S,124V,128D,132K,136M,148V,154K,169F,178T,180D,187D,203R,208G
KM048580	ZM1515M	Zambia	15-Mar-2007		genomic RNA	plasma		1	231	6F,27I,31G,33N,41T,52I,71D,83L,87Q,91V,110N,115V,116A,120S,124V,128D,132K,136M,148V,154K,169F,178T,180D,187D,203R,208G
KM048581	ZM1515M	Zambia	30-Aug-2007		genomic RNA	plasma		1	231	6F,15L,27I,31G,33N,41T,52I,71D,83L,87Q,91V,110N,115V,116A,120S,124V,128D,132K,136M,148V,154K,169F,178T,180D,187D,203R,208G
KM048582	ZM1515M	Zambia	08-May-2008		genomic RNA	plasma		1	231	6F,15L,27I,31G,33N,41T,52I,71D,83L,87Q,91V,110N,115V,116A,120S,124V,128D,132K,136M,148V,154K,169F,178T,180D,187D,203R,208G
KM048583	ZM1515M	Zambia	18-Oct-2008		genomic RNA	plasma		1	231	6F,15L,27I,31G,33N,41T,52I,71D,83L,87Q,91V,110N,115V,116A,120S,124V,128D,132K,136M,148V,154K,169F,178T,180D,187D,203R,208G
KM048574	ZM151M	Zambia	31-Jan-2002		genomic RNA	plasma		1	231	6L,14P,15L,27I,41T,71D,83L,92P,110N,116A,120S,124V,128D,148V,169F,178T,180D,187DE,203R,208G
KM048585	ZM1534F	Zambia	11-Dec-2009		genomic RNA	plasma		1	231	6M,26A,27I,31G,33N,36I,41T,68L,71D,79D,83L,91V,116A,128D,135V,148V,169F,178T,180D,203R,204G,207T,208G,210S
KM048584	ZM1534M	Zambia	11-Dec-2009		genomic RNA	plasma		1	231	6M,14AS,26A,27I,31G,33N,36I,41T,61DEG,68ILM,71D,79DE,83L,91V,116A,128D,135V,148V,154KR,169F,171IT,178T,180D,191IV,203R,204G,207T,208G,210S
KM048586	ZM1550F	Zambia	24-Feb-2007		genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,91V,98D,116A,120S,124V,128D,148V,154K,169F,177S,187D,203R,208G,210S,225S
KM048587	ZM1550M	Zambia	23-Feb-2007		genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,91V,96I,98D,116A,120S,128D,148V,154K,169F,177S,187D,203R,208G,210S,225S
KM048588	ZM1550M	Zambia	03-May-2007		genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,91V,96I,98D,116A,120S,128D,148V,154K,169F,177S,187D,203R,208G,210S,225S
KM048589	ZM1550M	Zambia	26-Jul-2007		genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,91V,96I,98D,116A,120S,128D,148V,154K,169F,177S,187D,203R,208G,210S,225S
KM048590	ZM1550M	Zambia	19-Oct-2007		genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,91V,96I,98D,116A,120S,128D,148V,154K,169F,177S,187D,203R,208G,210S,225S
KM048591	ZM1550M	Zambia	11-Jan-2008		genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,91V,96I,98D,116A,120S,128D,148V,154K,169F,177S,187D,203R,208G,210S,225S
KM048592	ZM1550M	Zambia	16-Jul-2008		genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,91V,96I,98D,116A,120S,128D,148V,154K,169F,177S,187D,203R,208G,210S,225S
KM048593	ZM1550M	Zambia	09-Dec-2008		genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,91V,96I,98D,116A,120S,128D,148V,154K,169F,177S,187D,203R,208G,210S,225S
KM048595	ZM1573F	Zambia	23-Feb-2006		genomic RNA	plasma		1	231	6L,27I,33N,36I,41T,71D,83L,91V,96I,116T,120S,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S
KM048596	ZM1573F	Zambia	24-May-2006		genomic RNA	plasma		1	231	6L,27I,33N,36I,41T,71D,83L,91V,96I,116T,120S,124V,128D,148V,154K,169F,178T,180D,187D,203R,210S
KM048597	ZM1573F	Zambia	24-Aug-2006		genomic RNA	plasma		1	231	6L,27I,33N,36I,41T,71D,83L,91V,96I,116T,120S,124V,128D,148V,154K,169F,178T,180D,187D,203R,210S
KM048598	ZM1573F	Zambia	18-Nov-2006		genomic RNA	plasma		1	231	6L,27I,33N,36I,41T,71D,83L,91V,96I,116T,120S,124V,128D,148V,154K,169F,178T,180D,187D,200IT,203R,208AG,210S
KM048599	ZM1573F	Zambia	15-Feb-2007		genomic RNA	plasma		1	231	6L,27I,33N,36I,41T,71D,83L,91V,96I,116T,120S,124V,128D,148V,154K,169F,178T,180D,187D,203R,210S
KM048600	ZM1573F	Zambia	02-Aug-2007		genomic RNA	plasma		1	231	6L,27I,33N,36I,41T,71D,83L,91V,96I,116T,120S,124V,128D,148V,154K,169F,178T,180D,187D,203R,210S
KM048601	ZM1573F	Zambia	10-Apr-2008		genomic RNA	plasma		1	231	6LP,14AT,27I,33N,36I,41T,61DEG,71D,83L,86IV,87HQ,91V,96I,98DE,116T,120S,124V,128D,148V,154K,169F,171AITV,178T,180D,187D,203R,208AS,210S
KM048602	ZM1573F	Zambia	05-Jun-2008		genomic RNA	plasma		1	231	6L,27I,33N,36I,41T,71D,83L,87Q,91V,96I,98D,116T,120S,124V,128D,148V,154K,169F,171V,178T,180D,187D,203R,210S
KM048594	ZM1573M	Zambia	23-Feb-2006		genomic RNA	plasma		1	231	6L,14AS,15L,27IV,33N,36I,41T,71D,83L,91AV,96IM,116AT,120S,124V,128D,148V,154K,169F,170KR,178T,180D,187D,203R,208G,210S
KM048603	ZM1587F	Zambia	20-Jan-2006		genomic RNA	plasma		1	231	6L,27I,31G,33N,41T,71D,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S
KM048604	ZM1600F	Zambia	12-Apr-2006		genomic RNA	plasma		1	231	6A,14P,27I,29DE,41T,71D,83L,110N,116A,120G,128D,148V,154K,169F,171AV,178T,180DE,187D,203R,204G,207Q,208G,225S
KM048606	ZM1613F	Zambia	17-Jun-2006		genomic RNA	plasma		1	231	6L,14P,15L,27I,41T,71D,83L,91V,96I,116T,128D,148V,154K,169F,178T,188S,203R,208G
KM048607	ZM1613F	Zambia	14-Sep-2006		genomic RNA	plasma		1	231	6L,14PS,15L,16ST,27I,41T,71D,83L,91V,96I,116T,128D,148V,154K,169F,178T,188S,203R,208G
KM048608	ZM1613F	Zambia	13-Jan-2007		genomic RNA	plasma		1	231	6L,14AS,15L,27I,41T,71D,83L,91V,96I,116T,128D,148V,154K,169F,178T,188S,203R,208G
KM048609	ZM1613F	Zambia	05-Apr-2007		genomic RNA	plasma		1	231	6L,15L,27I,41T,71D,83L,91V,96I,116T,128D,148V,154K,169F,178T,188S,203R,208G
KM048610	ZM1613F	Zambia	07-Jul-2007		genomic RNA	plasma		1	231	6L,15L,27I,41T,71D,83L,91V,96I,116T,128D,148V,154K,169F,178T,188ST,203R,208G
KM048611	ZM1613F	Zambia	15-Dec-2007		genomic RNA	plasma		1	231	6L,15L,27I,41T,71D,83L,91V,96I,115IV,116T,128D,148V,154K,169F,178T,203R,208G
KM048612	ZM1613F	Zambia	23-May-2008		genomic RNA	plasma		1	231	6L,15L,27I,41T,71D,83L,91V,96I,115IV,116T,128D,148V,154K,169F,178T,203R,208G
KM048605	ZM1613M	Zambia	17-Jun-2006		genomic RNA	plasma		1	231	6L,14P,15L,27I,41T,71D,83L,86AV,87HQ,91V,96I,116T,128D,148V,154K,169F,178T,188S,203R,208G
KM048613	ZM1626F	Zambia	23-Aug-2006		genomic RNA	plasma		1	231	6L,14P,15L,27I,31N,41T,71D,83L,112A,115V,116A,118I,120G,148V,163E,169F,178T,180D,187D,203R,208G,210S,225S
KM048614	ZM1626M	Zambia	23-Aug-2006		genomic RNA	plasma		1	231	6L,14P,15L,27I,31N,41T,71D,83L,112A,115V,116A,118I,120G,148V,163E,169F,178T,180D,187D,203R,208G,210S,225S
KM048615	ZM1626M	Zambia	14-Dec-2006		genomic RNA	plasma		1	231	6L,14P,15L,27I,31N,41T,71D,83L,112AV,115V,116A,118I,120G,148V,163E,169F,178T,180D,187D,203R,208G,210S,225S
KM048616	ZM1626M	Zambia	20-Mar-2007		genomic RNA	plasma		1	231	6L,14P,15L,27I,31N,41T,71D,83L,112AV,115V,116A,118IT,120G,148V,163E,169F,178T,180D,187D,203R,208G,210S,225S
KM048617	ZM1626M	Zambia	23-Jun-2007		genomic RNA	plasma		1	231	6L,14P,15L,27I,31N,41T,71D,83L,112AV,115V,116A,118IT,120G,148V,163E,169F,178T,180D,187D,203R,208G,210S,225S
KM048618	ZM1626M	Zambia	05-Sep-2007		genomic RNA	plasma		1	231	6L,14P,15L,27I,31N,41T,71D,83L,112A,115V,116A,118T,120G,148V,163E,169F,178T,180D,187D,203R,208G,210S,225S
KM048619	ZM1626M	Zambia	16-Feb-2008		genomic RNA	plasma		1	231	6L,14P,15L,27I,31N,41T,71D,83L,112A,115V,116A,118T,120G,148V,163E,169F,178T,180D,187D,203R,208G,210S,225S
KM048620	ZM1626M	Zambia	30-Aug-2008		genomic RNA	plasma		1	231	6L,14P,15L,27I,31N,41T,71D,83L,112A,115V,116A,118T,120GS,148V,163E,169F,178T,180D,187D,203R,208G,210S,225S
KM048622	ZM164F	Zambia	11-Jan-2002		genomic RNA	plasma		1	231	6L,27I,41T,71D,87Q,96I,98D,116T,120G,128D,148V,169F,178T,203R,208G,210S
KM048621	ZM164M	Zambia	11-Jan-2002		genomic RNA	plasma		1	231	6L,27I,41T,71D,87Q,96I,98D,116T,120G,128D,148V,169F,178T,203R,208G,210S
KM048624	ZM1658F	Zambia	08-Jun-2006		genomic RNA	plasma		1	231	6HQ,27I,41T,71D,75D,83L,116A,148V,154K,169F,178T,187D,191IV,200S,207S,208G,225S
KM048625	ZM1658F	Zambia	09-Sep-2006		genomic RNA	plasma		1	231	6HQ,27I,41T,71D,75D,83L,116A,148V,154K,169F,178T,187D,191IV,200S,207S,208G,225S
KM048626	ZM1658F	Zambia	06-Jan-2007		genomic RNA	plasma		1	231	6HQ,27I,41T,71D,75D,83L,116A,148V,154K,169F,178T,187D,200S,207S,208G,225S
KM048627	ZM1658F	Zambia	16-Jun-2007		genomic RNA	plasma		1	231	6Q,27I,41T,71D,75D,83L,91N,116A,148V,154K,169F,178T,187D,200S,207S,208G,225S
KM048628	ZM1658F	Zambia	08-Dec-2007		genomic RNA	plasma		1	231	6HQ,15IL,27I,41T,71D,75D,83L,91IN,116A,148V,154K,169F,178T,187D,200S,207S,208G,225S,228AT
KM048629	ZM1658F	Zambia	07-Jun-2008		genomic RNA	plasma		1	231	6HQ,27I,41T,71D,75D,83L,91N,96LM,116A,148V,154K,169F,178T,187D,200S,207S,208G,225S
KM048623	ZM1658M	Zambia	10-Jun-2006		genomic RNA	plasma		1	231	6HQ,27I,41T,71D,75D,83L,116A,148V,154K,169F,178T,183DGNS,187D,191IV,200CST,207S,208G,210AP,225S
KM048631	ZM1662F	Zambia	08-Jun-2006		genomic RNA	plasma		1	231	6L,15L,27I,41T,50S,54S,71D,83L,116A,128D,148V,169F,171A,178T,187D,207S,208G,225S
KM048632	ZM1662F	Zambia	30-Aug-2006		genomic RNA	plasma		1	231	6L,15L,27I,41T,50S,54S,70N,71D,83L,116A,128D,148V,169F,171A,178T,187D,207S,208G,225S
KM048633	ZM1662F	Zambia	28-Mar-2007		genomic RNA	plasma		1	231	6L,15L,27I,41T,50S,54S,71D,83L,96LM,112X,116A,128D,148V,169F,171A,178T,187D,207S,208G,225S
KM048634	ZM1662F	Zambia	20-Jun-2007		genomic RNA	plasma		1	231	6L,15L,27I,41T,50S,54S,71D,83L,111Q,116A,128D,148V,169F,171A,178T,187D,207S,208G,225S
KM048635	ZM1662F	Zambia	05-Dec-2007		genomic RNA	plasma		1	231	6L,14P,15L,27I,41T,50S,54S,71D,83L,111Q,116A,128D,148V,169F,171A,178T,187D,207S,208G,225S
KM048636	ZM1662F	Zambia	21-May-2008		genomic RNA	plasma		1	231	6L,14P,15L,27I,41T,50S,54S,71D,83L,111Q,116A,128D,148V,169F,171A,178T,187D,207S,208G,225S
KM048630	ZM1662M	Zambia	10-Jun-2006		genomic RNA	plasma		1	231	6L,15IL,27I,41T,50S,54S,71D,83L,116A,128D,148V,169F,171A,178T,180D,207Q,208G,225S
KM048637	ZM1675M	Zambia	24-Feb-2006		genomic RNA	plasma		1	231	6H,14P,27I,41T,50N,71D,83L,116A,120DGNS,128D,148V,154K,169F,178T,187D,208G
KM048638	ZM1685F	Zambia	07-Apr-2006		genomic RNA	plasma		1	231	6L,27I,36I,41T,71D,83L,87Q,91V,116A,120G,123G,124V,128D,148V,154K,169F,178T,187D,203R,208G,225S
KM048639	ZM1685M	Zambia	07-Apr-2006		genomic RNA	plasma		1	231	6L,27I,36I,41T,71D,83L,87Q,91V,116A,120G,123G,124V,128D,148V,154K,169F,178T,183G,187D,203R,208G,225S
KM048640	ZM1685M	Zambia	24-Aug-2006		genomic RNA	plasma		1	231	6L,27I,36I,41T,71D,83L,87Q,91V,116A,120G,123G,124V,128D,148V,154K,169F,178T,183G,187D,203R,208G
KM048641	ZM1685M	Zambia	21-Nov-2006		genomic RNA	plasma		1	231	6L,27I,36I,41T,71D,83L,87Q,91V,116A,120G,123G,124V,128D,148V,154K,169F,178T,183G,187D,203R,208G
KM048642	ZM1685M	Zambia	13-Feb-2007		genomic RNA	plasma		1	231	6L,27I,36I,41T,71D,83L,87Q,91V,116A,120G,123G,124V,128D,148V,154K,169F,178T,183G,187D,203R,208G
KM048643	ZM1685M	Zambia	15-May-2007		genomic RNA	plasma		1	231	6L,27I,36I,41T,71D,83L,87Q,91V,116A,120G,123G,124V,128D,148V,154K,169F,178T,183G,187D,203R,208G
KM048644	ZM1685M	Zambia	23-Oct-2007		genomic RNA	plasma		1	231	6L,15IL,27I,36I,41T,71D,83L,87Q,91V,116A,120G,123G,124V,128D,148V,154K,169F,178T,183G,187D,203R,208G
KM048645	ZM1685M	Zambia	12-Apr-2008		genomic RNA	plasma		1	231	6L,27I,36I,41T,71D,83L,87Q,91V,116A,120G,123G,124V,128D,148V,154K,169F,178T,183G,187D,203R,208G
KM048646	ZM1691F	Zambia	28-Feb-2006		genomic RNA	plasma		1	231	6L,15L,27I,41T,50G,59I,71D,83L,111T,116A,120S,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
KM048647	ZM1696F	Zambia	10-Mar-2006		genomic RNA	plasma		1	231	6A,27I,41T,71D,91V,96I,110N,116T,120G,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
KM048648	ZM1697M	Zambia	17-Mar-2006		genomic RNA	plasma		1	231	6L,27I,41ST,71D,83L,87HQ,91V,116A,120S,128D,136M,148V,154K,169F,170KR,178T,183G,187D,203R,208G,225S
KM048650	ZM1699F	Zambia	30-Sep-2008		genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,91A,96V,116A,120S,148V,154K,169F,178T,180D,187D,191IL,208G,210S,225S
KM048649	ZM1699M	Zambia	30-Sep-2008		genomic RNA	plasma		1	231	6L,11I,27I,41T,50S,71D,83L,116N,120S,128D,148V,154K,169F,177S,178T,187D,207S,208G,225S
KM048652	ZM1710F	Zambia	14-Nov-2006		genomic RNA	plasma		1	231	6L,27I,41T,59I,71D,79D,116A,124V,148V,154K,169F,177S,187D,207S,208G
KM048653	ZM1710F	Zambia	02-Mar-2007		genomic RNA	plasma		1	231	6L,27I,41T,59I,71D,79D,116A,124V,148V,154K,169F,177S,187D,207S,208G
KM048654	ZM1710F	Zambia	26-May-2007		genomic RNA	plasma		1	231	6L,27I,41T,59I,71D,79D,116A,124V,148V,154K,169F,177S,187D,207S,208G
KM048655	ZM1710F	Zambia	02-Nov-2007		genomic RNA	plasma		1	231	6L,27I,41T,59I,71D,79D,116A,124V,148V,154K,169F,177S,187D,207S,208G
KM048656	ZM1710F	Zambia	22-Oct-2008		genomic RNA	plasma		1	231	6L,27I,41T,59I,71D,79D,116A,124V,148V,154K,169F,177S,178T,187D,207S,208G
KM048651	ZM1710M	Zambia	14-Nov-2006		genomic RNA	plasma		1	231	6L,27I,41T,59I,71D,79D,116A,124V,148V,154K,169F,177S,187D,207S,208G
KM048658	ZM1747F	Zambia	13-Mar-2009		genomic RNA	plasma		1	231	6L,47C,71D,83L,116A,120G,123G,124V,128D,136M,148V,154K,169F,171V,177S,178T,187D,200N,203R,225S
KM048657	ZM1747M	Zambia	13-Mar-2009		genomic RNA	plasma		1	231	6L,47C,71D,83L,107ST,116A,120G,123G,124V,128D,136IM,148V,154K,169F,171AITV,177S,178T,187D,200NS,203R,207PS,208AG,225S
KM048659	ZM1754M	Zambia	02-Feb-2006		genomic RNA	plasma		1	231	6L,15L,27I,36I,41T,71D,83L,91A,98DE,116A,120NS,124IV,128D,136LM,148V,154K,169F,178T,180DE,187D,203R,208G,210S,225S
KM048661	ZM176F	Zambia	16-Jul-2002		genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,207S,208G,225S
KM048660	ZM176M	Zambia	16-Jul-2002		genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,207S,208G,225S
KM048662	ZM177F	Zambia	14-Jan-2004		genomic RNA	plasma		1	231	2V,6L,14P,15L,27I,41T,50G,71D,83L,87Q,91V,96I,116T,120S,128D,148V,154K,169F,178T,180D,187D,203R,208S,210S,225S
KM048663	ZM177F	Zambia	15-Jul-2004		genomic RNA	plasma		1	231	2V,6L,14P,15L,27I,41T,50G,71D,83L,87Q,91V,96I,116T,120S,128D,148V,154K,169F,178T,180D,187D,203R,208S,210S,225S
KM048664	ZM177F	Zambia	18-Jan-2005		genomic RNA	plasma		1	231	2V,6L,14PT,15L,27I,41T,50G,71D,83L,87Q,91V,96I,116T,120S,128D,148V,154K,169F,178T,180D,187D,203R,208S,210S,225S
KM048665	ZM177F	Zambia	15-Jul-2005		genomic RNA	plasma		1	231	2V,6L,15L,27I,41T,50G,71D,83L,87Q,91V,96I,116T,120S,128D,148V,154K,169F,178T,180D,187D,203R,208S,210S,225S
KM048670	ZM1781F	Zambia	12-Jan-2008		genomic RNA	plasma		1	231	6L,13N,14P,15L,41T,55L,71D,116A,120A,128D,148V,154K,169F,178T,203R,208G,225S
KM048671	ZM1781M	Zambia	12-Feb-2008		genomic RNA	plasma		1	231	6L,13N,14P,15L,41T,55L,71D,116A,120A,128D,148V,154K,169F,178T,203R,208G,225S
KM048673	ZM1788F	Zambia	10-Feb-2007		genomic RNA	plasma		1	231	6L,14S,27I,41T,50A,71D,83L,86P,87Q,91V,96I,98D,116T,120S,124V,128D,148V,154K,169F,178T,187D,203R,204G,208G,225S
KM048674	ZM1788F	Zambia	22-Jun-2007		genomic RNA	plasma		1	231	6L,14S,27I,41T,50A,71D,83L,86P,87Q,91V,96I,98D,116T,120S,124V,128D,148V,154K,169F,178T,187D,203R,204G,208G,225S
KM048675	ZM1788F	Zambia	05-Sep-2007		genomic RNA	plasma		1	231	6L,14S,27I,41T,50A,71D,83L,86P,87Q,91V,96I,98D,116T,120S,124V,128D,148V,154K,169F,178T,187D,203R,204G,208G,225S
KM048676	ZM1788F	Zambia	27-Nov-2007		genomic RNA	plasma		1	231	6L,14S,27I,41T,50A,71D,83L,86P,87Q,91V,96I,98D,116T,120S,124V,128D,148V,154K,169F,178T,187D,203R,204G,208G,225S
KM048677	ZM1788F	Zambia	28-Feb-2008		genomic RNA	plasma		1	231	6L,14S,27I,41T,50A,71D,83L,86P,87Q,91V,96I,98DE,116T,120S,124V,128D,148V,154K,169F,178T,187D,203R,204G,208G,225S
KM048678	ZM1788F	Zambia	07-Aug-2008		genomic RNA	plasma		1	231	6L,14S,27I,41T,50A,71D,83IL,86P,87Q,91V,96I,116T,120S,124V,128D,148V,154K,169F,178T,187D,203R,204G,208G,225S
KM048679	ZM1788F	Zambia	20-Jan-2009		genomic RNA	plasma		1	231	6L,14S,27I,41T,50A,71D,83I,86P,87Q,91V,96I,116T,120S,124V,128D,148V,154K,169F,178T,187D,203R,204G,208G,225S
KM048672	ZM1788M	Zambia	10-Feb-2007		genomic RNA	plasma		1	231	6L,14S,15L,27I,41T,50AS,71D,83L,86ALPV,87Q,88AV,91V,96I,98D,116AT,120S,124V,128D,148V,154K,169F,178T,187D,203R,204G,208G,225S
KM048666	ZM178F	Zambia	18-Jan-2003		genomic RNA	plasma		1	231	6L,27I,41T,71D,83M,116A,120S,128D,148V,154K,169F,177S,178T,203R,207S,208G,225S
KM048667	ZM178F	Zambia	26-Jun-2003		genomic RNA	plasma		1	231	6L,27I,41T,71D,83M,110N,116A,120S,128D,148V,154K,169F,177S,178T,203R,207S,208G,225S
KM048668	ZM178F	Zambia	14-Jan-2004		genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,110N,116A,120S,128D,148V,154K,169F,177S,178T,203R,207S,208G,225S
KM048669	ZM178F	Zambia	16-Jul-2004		genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,110N,116A,120S,128D,148V,154K,169F,177S,178T,203R,207S,208G,225S
KM048685	ZM1803F	Zambia	12-Jul-2007		genomic RNA	plasma		1	231	6L,14AP,15IM,27I,36I,41T,45G,50E,71D,83L,87Q,91V,110N,116A,120S,128D,148V,154K,169F,178T,180D,187D,191I,203R,208G,210S
KM048686	ZM1803F	Zambia	07-Nov-2007		genomic RNA	plasma		1	231	6L,14AP,15M,27I,36I,41T,45G,50E,71D,83L,87Q,91V,116A,120S,128D,148V,154K,169F,178T,180D,187D,191I,203R,208G,210S
KM048687	ZM1803F	Zambia	24-Jan-2008		genomic RNA	plasma		1	231	6L,15M,27I,36I,41T,45G,50E,71D,83L,87Q,91V,116A,120S,128D,148V,154K,169F,178T,180D,187D,191I,203R,208G,210S
KM048688	ZM1803F	Zambia	04-Jun-2008		genomic RNA	plasma		1	231	6L,15M,27I,36I,41T,45GV,50E,71D,83L,87Q,91V,116A,120S,128D,148V,154K,169F,178T,180D,187D,191I,203R,208G,210S
KM048689	ZM1803F	Zambia	06-Jan-2009		genomic RNA	plasma		1	231	6L,15M,27I,36I,41T,45G,50E,68IM,71D,83L,87Q,91V,116A,120S,128D,148V,154K,169F,178T,180DE,187D,191I,203R,208G,210S
KM048690	ZM1803F	Zambia	21-Mar-2009		genomic RNA	plasma		1	231	6L,15M,27I,36I,41T,45GV,50E,71D,83L,87Q,91V,116A,120S,128D,148V,154K,169F,178T,180DE,187D,191I,203R,205LV,208G,210S
KM048684	ZM1803M	Zambia	12-Jul-2007		genomic RNA	plasma		1	231	6L,14P,27I,36I,41T,45G,50E,71D,83L,87Q,91V,110N,116A,120S,128D,148V,154K,169F,178T,180D,187D,191I,203R,208G,210S
KM048680	ZM180M	Zambia	20-Jul-2002		genomic RNA	plasma		1	231	6V,14P,15L,27I,29D,41T,71D,83L,110N,116A,120G,128D,148V,154K,169F,178T,187D,203R,208G,210S,225S
KM048681	ZM180M	Zambia	23-Jan-2003		genomic RNA	plasma		1	231	6V,14P,15L,27I,29D,41T,71D,83L,96IM,110N,116A,120G,128D,148V,154K,169F,178T,187D,203R,210S,225S
KM048682	ZM180M	Zambia	11-Jul-2003		genomic RNA	plasma		1	231	6V,14P,15L,27I,29D,41T,71D,83L,96IM,110N,116A,120G,128D,148V,154K,169F,178T,187D,203R,210S,225S
KM048683	ZM180M	Zambia	14-Jan-2004		genomic RNA	plasma		1	231	6V,14P,15L,27I,41T,71D,83L,96IM,110N,116A,120G,128D,148V,154K,169F,178T,187D,203R,210S,225S
KM048691	ZM182F	Zambia	24-Aug-2004		genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,120S,128D,136M,148V,154K,169F,178T,180D,187D,203R,208G,225S
KM048692	ZM182F	Zambia	24-Feb-2005		genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,120S,128D,136M,148V,154K,169F,178T,180D,187D,203R,208G,225S
KM048693	ZM182F	Zambia	23-Aug-2005		genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,120S,128D,136M,148V,154K,169F,178T,180D,187D,203R,208G,225S
KM048694	ZM182F	Zambia	16-Feb-2006		genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,120S,128D,136M,148V,154K,169F,178T,180D,187D,203R,208G,225S
JN014396	ZM185F	Zambia	17-Aug-2002	10	genomic RNA	plasma		1	231	3I,6L,10L,14P,16A,27I,41T,71D,83L,116A,120A,121T,124V,128D,148V,154K,169F,171V,177G,180D,187D,203R,208G,210S,225S
JN014397	ZM185F	Zambia	17-Aug-2002	11	genomic RNA	plasma		1	231	3I,6L,10L,14P,16A,27I,41T,71D,83L,116A,120A,121T,124V,128D,148V,154K,169F,171V,177G,180D,187D,203R,208G,210S,225S
JN014398	ZM185F	Zambia	17-Aug-2002	12	genomic RNA	plasma		1	231	3I,6L,10L,14P,16A,27I,41T,71D,83L,116A,120A,121T,124V,128D,148V,154K,169F,171V,177G,180D,187D,203R,208G,210S,225S
JN014399	ZM185F	Zambia	17-Aug-2002	13	genomic RNA	plasma		1	231	3I,6L,10L,14P,16A,27I,41T,71D,83L,116A,120A,121T,124V,128D,148V,154K,169F,171V,177G,180D,187D,203R,208G,210S,225S
JN014400	ZM185F	Zambia	17-Aug-2002	17	genomic RNA	plasma		1	231	3I,6L,10L,14P,16A,27I,41T,71D,83L,116A,120A,121T,124V,128D,148V,154K,169F,171V,177G,180D,187D,203R,208G,210S,225S
JN014401	ZM185F	Zambia	17-Aug-2002	18	genomic RNA	plasma		1	231	3I,6L,10L,14P,16A,27I,41T,71D,83L,116A,120A,121T,124V,128D,148V,154K,169F,171V,177G,180D,187D,203R,208G,210S,225S
JN014402	ZM185F	Zambia	17-Aug-2002	20	genomic RNA	plasma		1	231	3I,6L,10L,14P,16A,27I,41T,71D,83L,116A,120A,121T,124V,128D,148V,154K,169F,171V,177G,180D,187D,203R,208G,210S,225S
JN014403	ZM185F	Zambia	17-Aug-2002	21	genomic RNA	plasma		1	231	3I,6L,10L,14P,16A,27I,41T,71D,83L,116A,120A,121T,124V,128D,148V,154K,169F,171V,177G,180D,187D,203R,208G,210S,225S
JN014404	ZM185F	Zambia	17-Aug-2002	22	genomic RNA	plasma		1	231	3I,6L,10L,14P,16A,27I,41T,71D,83L,116A,120A,121T,124V,128D,148V,154K,169F,171V,177G,180D,187D,203R,208G,210S,225S
JN014405	ZM185F	Zambia	17-Aug-2002	24	genomic RNA	plasma		1	231	3I,6L,10L,14P,16A,27I,41T,71D,83L,116A,120A,121T,124V,128D,148V,154K,169F,171V,177G,180D,187D,203R,208G,210S,225S
JN014406	ZM185F	Zambia	17-Aug-2002	26	genomic RNA	plasma		1	231	3I,6L,10L,14P,16A,27I,41T,71D,83L,116A,120A,121T,124V,128D,148V,154K,169F,171V,177G,180D,187D,203R,208G,210S,225S
JN014407	ZM185F	Zambia	17-Aug-2002	27	genomic RNA	plasma		1	231	3I,6L,10L,14P,16A,27I,41T,71D,83L,116A,120A,121T,124V,128D,148V,154K,169F,171V,177G,180D,187D,203R,208G,210S,225S
JN014408	ZM185F	Zambia	17-Aug-2002	28	genomic RNA	plasma		1	231	3I,6L,10L,14P,16A,27I,41T,71D,83L,116A,120A,121T,124V,128D,148V,154K,169F,171V,177G,180D,187D,203R,208G,210S,225S
JN014409	ZM185F	Zambia	17-Aug-2002	29	genomic RNA	plasma		1	231	3I,6L,10L,14P,16A,27I,41T,71D,83L,116A,120A,121T,124V,128D,148V,154K,169F,171V,177G,180D,187D,203R,208G,210S,225S
JN014410	ZM185F	Zambia	17-Aug-2002	30	genomic RNA	plasma		1	231	3I,6L,10L,14P,16A,27I,41T,71D,83L,116A,120A,121T,124V,128D,148V,154K,169F,171V,177G,180D,187D,203R,208G,210S,225S
JN014411	ZM185F	Zambia	17-Aug-2002	31	genomic RNA	plasma		1	231	3I,6L,10L,14P,16A,27I,41T,71D,83L,116A,120A,121T,124V,128D,148V,154K,169F,171V,177G,180D,187D,203R,208G,210S,225S
JN014412	ZM185F	Zambia	17-Aug-2002	34	genomic RNA	plasma		1	231	3I,6L,10L,14P,16A,27I,41T,71D,83L,116A,120A,121T,124V,128D,148V,154K,169F,171V,177G,180D,187D,203R,208G,210S,225S
JN014413	ZM185F	Zambia	17-Aug-2002	36	genomic RNA	plasma		1	231	3I,6L,10L,14P,16A,27I,41T,71D,83L,116A,120A,121T,124V,128D,148V,154K,169F,171V,177G,180D,187D,203R,208G,210S,225S
JN014414	ZM185F	Zambia	17-Aug-2002	38	genomic RNA	plasma		1	231	3I,6L,10L,14P,16A,27I,41T,71D,83L,116A,120A,121T,124V,128D,148V,154K,169F,171V,177G,180D,187D,203R,208G,210S,225S
JN014415	ZM185F	Zambia	17-Aug-2002	39	genomic RNA	plasma		1	231	3I,6L,10L,14P,16A,27I,41T,71D,83L,116A,120A,121T,124V,128D,148V,154K,169F,171V,177G,180D,187D,203R,208G,210S,225S
JN014416	ZM185F	Zambia	17-Aug-2002	9	genomic RNA	plasma		1	231	3I,6L,10L,14P,16A,27I,41T,71D,83L,116A,120A,121T,124V,128D,148V,154K,169F,171V,177G,180D,187D,203R,208G,210S,225S
KM048695	ZM185F	Zambia	17-Aug-2002		genomic RNA	plasma		1	231	3I,6L,10L,14P,16A,27I,41T,71D,83L,116A,120A,121T,124V,128D,148V,154K,169F,171V,177G,180D,187D,203R,208G,210S,225S
KM048696	ZM185F	Zambia	30-Jan-2003		genomic RNA	plasma		1	231	3I,6L,10L,14P,16A,27I,41T,71D,83L,110N,116A,120A,121NT,124V,128D,148V,154K,169F,171V,177G,180D,187D,203R,208G,210S,225S
KM048697	ZM185F	Zambia	31-Jul-2003		genomic RNA	plasma		1	231	3I,6L,10L,14P,16A,27I,41T,71D,83L,110N,116A,120A,124V,128D,148V,154K,169F,171V,177G,180D,187D,203R,208G,210S,225S
KM048698	ZM185F	Zambia	17-Jan-2004		genomic RNA	plasma		1	231	3I,6L,10L,14P,16A,27I,41T,71D,83L,110N,116A,120A,124V,128D,148V,154K,169F,171V,177G,180D,187D,203R,208G,210S,225S
KM048699	ZM185F	Zambia	10-Jul-2004		genomic RNA	plasma		1	231	3IV,6L,10LM,14P,16A,27I,41T,71D,83L,110N,116A,120A,124V,128D,148V,154K,169F,171V,177G,180D,187D,203R,208G,210S,225S
JN014417	ZM185M	Zambia	17-Aug-2002	13	genomic RNA	plasma		1	231	3I,6L,10L,14P,16A,27I,41T,71D,83L,91V,116A,120A,121T,124V,128D,148V,154K,169F,171V,177G,180D,187D,203R,208G,210S,225S
JN014418	ZM185M	Zambia	17-Aug-2002	17	genomic RNA	plasma		1	231	3I,6L,10L,14P,16A,27I,41T,71D,83L,87Q,91V,116A,120A,121T,124V,128D,148V,154K,169F,171V,177G,180D,187D,203R,208G,210S,225S
JN014419	ZM185M	Zambia	17-Aug-2002	19	genomic RNA	plasma		1	231	3I,6L,10L,14P,16A,27I,41T,71D,83L,87Q,91V,96I,116T,120A,124V,128D,148V,154K,169F,171V,177G,180D,187D,203R,208G,210S,225S
JN014420	ZM185M	Zambia	17-Aug-2002	2	genomic RNA	plasma		1	231	3I,6L,10L,14P,16A,27I,41T,71D,83L,87Q,91V,116A,120A,121T,124V,128D,148V,154K,169F,171V,177G,180D,187D,203R,208G,210S,225S
JN014421	ZM185M	Zambia	17-Aug-2002	21	genomic RNA	plasma		1	231	3I,6L,10L,14P,16A,41T,71D,83L,91V,96I,116T,120A,124V,128D,148V,154K,169F,171V,177G,180D,187D,203R,208G,210S,225S
JN014422	ZM185M	Zambia	17-Aug-2002	25	genomic RNA	plasma		1	231	1L,3I,6L,10L,14P,16A,27I,41T,71D,83L,91V,116A,120A,121T,124V,128D,148V,154K,169F,171V,177G,180D,187D,203R,208G,210S,225S
JN014423	ZM185M	Zambia	17-Aug-2002	3	genomic RNA	plasma		1	231	3I,6L,10L,14P,16A,27I,41T,71D,83L,116A,120A,121T,124V,128D,148V,154K,169F,171V,177G,180D,187D,203R,208G,210S,225S
JN014424	ZM185M	Zambia	17-Aug-2002	35	genomic RNA	plasma		1	231	3I,6L,10L,14P,16A,41T,71D,83L,87Q,91V,96I,116T,120A,124V,128D,148V,154K,169F,171V,177G,180D,187D,203R,208G,210S,225S
JN014425	ZM185M	Zambia	17-Aug-2002	45	genomic RNA	plasma		1	231	3I,6L,10L,14P,16A,41T,71D,83L,87Q,91V,96I,116T,120A,124V,128D,148V,154K,169F,171V,177G,180D,187D,203R,208G,210S,225S
JN014426	ZM185M	Zambia	17-Aug-2002	51	genomic RNA	plasma		1	231	3I,6L,10L,14P,16A,27I,41T,71D,83L,116A,120A,121T,124V,128D,148V,154K,169F,171V,177G,180D,187D,203R,208G,210S,225S
JN014427	ZM185M	Zambia	17-Aug-2002	56	genomic RNA	plasma		1	231	3I,6L,10L,14P,16A,27I,41T,71D,83L,87Q,91V,116A,120A,121T,124V,128D,148V,154K,169F,171V,177G,180D,187D,203R,208G,210S,225S
JN014428	ZM185M	Zambia	17-Aug-2002	60	genomic RNA	plasma		1	231	3I,6L,10L,14P,16A,27I,41T,71D,83L,87Q,91V,96I,116T,120A,124V,128D,148V,154K,169F,171V,177G,180D,187D,203R,208G,210S,225S
JN014429	ZM185M	Zambia	17-Aug-2002	75	genomic RNA	plasma		1	231	3I,6L,10L,14P,16A,27I,41T,71D,83L,91V,116A,120A,121T,124V,128D,148V,154K,169F,171V,177G,180D,187D,203R,208G,210S,225S
JN014430	ZM185M	Zambia	17-Aug-2002	80	genomic RNA	plasma		1	231	3I,6L,10L,14P,16A,27I,41T,71D,83L,116A,120A,121T,124V,128D,148V,154K,169F,171V,177G,180D,187D,203R,208G,210S,225S
JN014431	ZM185M	Zambia	17-Aug-2002	82	genomic RNA	plasma		1	231	3I,6L,10L,14P,16A,27I,41T,71D,83L,87Q,116A,120A,121T,124V,128D,148V,154K,169F,171V,177G,180D,187D,203R,208G,210S,225S
JN014432	ZM185M	Zambia	17-Aug-2002	86	genomic RNA	plasma		1	231	3I,6L,10L,14P,16A,27I,41T,71D,83L,91V,116A,120A,121T,124V,128D,148V,154K,169F,171V,177G,180D,187D,203R,208G,210S,225S
JN014433	ZM185M	Zambia	17-Aug-2002	87	genomic RNA	plasma		1	231	3I,6L,10L,14P,16A,27I,41T,71D,83L,91V,116A,120A,121T,124V,128D,148V,154K,169F,171V,177G,180D,187D,203R,208G,210S,225S
JN014434	ZM185M	Zambia	17-Aug-2002	90	genomic RNA	plasma		1	231	3I,6L,10L,14P,16A,27I,41T,71D,83L,116A,120A,121T,124V,128D,148V,154K,169F,171V,177G,180D,187D,203R,208G,210S,225S
JN014435	ZM185M	Zambia	17-Aug-2002	93	genomic RNA	plasma		1	231	3I,6L,10L,14P,16A,27I,41T,71D,83L,87Q,91V,96I,116T,120A,124V,128D,148V,154K,169F,171V,177G,180D,187D,203R,208G,210S,225S
JN014436	ZM185M	Zambia	17-Aug-2002	95	genomic RNA	plasma		1	231	3I,6L,10L,14P,16A,27I,41T,71D,83L,116A,120A,121T,124V,128D,148V,154K,169F,171V,177G,180D,187D,203R,208G,210S,225S
KM048704	ZM1862F	Zambia	09-Aug-2008		genomic RNA	plasma		1	231	6L,14P,27I,41T,58A,71D,83L,87HQ,110N,113D,116A,120G,128D,148V,154K,169F,170R,178T,180D,187D,203R,207Q,208G,225S
KM048705	ZM1862M	Zambia	09-Aug-2008		genomic RNA	plasma		1	231	6L,15L,27I,41T,52I,71D,83T,87Q,91V,96I,116A,124V,132K,148V,154K,169F,178T,180D,187D,191I,203R,208G,225S
KM048700	ZM186M	Zambia	19-Jun-2002		genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,116A,124V,128D,148V,154K,169F,170R,178T,180D,187D,203R,208G,210S
KM048701	ZM186M	Zambia	26-Nov-2002		genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,116A,124V,128D,148V,154K,169F,170R,178T,180D,187D,203R,208G,210S
KM048702	ZM186M	Zambia	06-Jun-2003		genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,110N,116A,124V,128D,148V,154K,169F,170R,178T,180D,187D,203R,208G,210S
KM048703	ZM186M	Zambia	26-Nov-2003		genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,110N,116A,124V,128D,148V,154K,169F,170R,178T,180D,187D,203R,208G,210S
KM048709	ZM1906F	Zambia	04-Jun-2009		genomic RNA	plasma		1	231	6L,15L,27I,41T,71D,75D,83L,86A,91V,116A,120S,124V,148V,169F,178T,203R,208G
KM048710	ZM1906M	Zambia	04-Jun-2009		genomic RNA	plasma		1	231	6L,15L,27I,41T,71D,75D,83L,86A,91V,116A,120S,124V,148V,169F,178T,203R,208G
KM048706	ZM190F	Zambia	06-Dec-2003		genomic RNA	plasma		1	231	6L,27I,41T,71D,83M,91V,116A,120A,123A,128D,148V,154K,169F,177S,187D,203R,208G,210S
KM048707	ZM190F	Zambia	13-May-2004		genomic RNA	plasma		1	231	6L,27I,41T,71D,83M,91V,116A,120S,123A,128D,148V,154K,169F,177S,187D,203R,208G,210S
KM048708	ZM190F	Zambia	28-Oct-2004		genomic RNA	plasma		1	231	6L,27I,41T,71D,83M,91V,116A,120S,123A,128D,148V,154K,169F,177S,187D,203R,208G,210S
KM048711	ZM193F	Zambia	06-Jun-2003		genomic RNA	plasma		1	231	6L,27I,31G,33N,41T,71D,83L,86P,87Q,91V,96I,115V,116T,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
KM048712	ZM193F	Zambia	28-Jan-2004		genomic RNA	plasma		1	231	6L,27I,31G,33N,41T,71D,83L,86P,87Q,91V,96I,115V,116T,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
KM048713	ZM193F	Zambia	22-Jul-2004		genomic RNA	plasma		1	231	6L,27I,31G,33N,41T,71D,83L,86P,87Q,91V,96I,115V,116T,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
KM048714	ZM193F	Zambia	19-Jan-2005		genomic RNA	plasma		1	231	6L,27I,31G,33N,41T,71D,83L,86P,87Q,91AV,96I,115V,116T,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
KM048715	ZM194M	Zambia	06-Jun-2003		genomic RNA	plasma		1	231	6H,14P,27I,41T,71D,83L,115V,116A,120G,128D,148V,169F,187D,207L,208G
KM048716	ZM194M	Zambia	21-Feb-2004		genomic RNA	plasma		1	231	6H,14P,27I,41T,71D,83L,115V,116A,120G,128D,148V,169F,187D,207L,208G
KM048717	ZM194M	Zambia	24-Aug-2004		genomic RNA	plasma		1	231	6H,14P,27I,41T,71D,83L,98K,115V,116A,120G,128D,148V,169F,187D,207LV,208G
KM048718	ZM194M	Zambia	25-Feb-2005		genomic RNA	plasma		1	231	6H,14P,27I,41T,71D,83L,115V,116A,120G,128D,148V,169F,187D,207V,208G
KM048721	ZM1957F	Zambia	09-Apr-2008		genomic RNA	plasma		1	231	6L,27I,36I,41T,71D,75D,79D,83L,91V,116A,120S,124V,148V,154KR,169F,178T,187D,200S,203R,208G,225S
KM048722	ZM1957M	Zambia	09-Apr-2008		genomic RNA	plasma		1	231	6L,27I,36I,41T,71D,75D,79D,83L,91V,116A,120S,124V,148V,154K,169F,178T,187D,200S,203R,208G,225S
KM048719	ZM195M	Zambia	25-Feb-2004		genomic RNA	plasma		1	231	6F,14P,15L,16T,27I,31G,33N,41T,71D,83T,91V,107S,110N,115V,116A,120A,124V,148V,154K,169F,178T,187D,208G,225S
KM048720	ZM195M	Zambia	18-Nov-2004		genomic RNA	plasma		1	231	6F,14P,15L,16T,27I,31G,33N,41T,71D,83T,91V,107S,110NT,115V,116A,120A,124V,148V,154K,169F,178T,187D,208G,225S
KM048723	ZM196F	Zambia	16-Jul-2002		genomic RNA	plasma		1	231	6L,15L,27I,41T,45D,54S,68I,71D,83L,91V,116A,128D,148V,169F,178T,180D,187D,203R,208G
KM048724	ZM196F	Zambia	21-Jan-2003		genomic RNA	plasma		1	231	6L,15L,27I,41T,45D,54S,68I,71D,83L,91V,116A,128D,148V,169F,178T,180D,187D,203R,208G
KM048725	ZM196F	Zambia	03-Jul-2003		genomic RNA	plasma		1	231	6L,15L,27I,41T,45D,54S,68I,71D,83L,91V,116A,128D,148V,169F,178T,180D,187D,203R,208G
KM048726	ZM196F	Zambia	08-Jan-2004		genomic RNA	plasma		1	231	6L,15L,27I,41T,45D,54S,68I,71D,83L,91V,116A,128D,148V,169F,178T,180D,187D,203R,208G
KM048727	ZM199M	Zambia	19-Nov-2004		genomic RNA	plasma		1	231	6L,27I,36I,41T,71D,83L,91V,96L,116A,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
KM048728	ZM199M	Zambia	28-May-2005		genomic RNA	plasma		1	231	6L,27I,36I,41T,71D,83L,91V,96L,116A,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
KM048729	ZM199M	Zambia	29-Nov-2005		genomic RNA	plasma		1	231	6L,14AP,27I,36IV,41T,71D,83L,91V,96L,116A,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
KM048730	ZM199M	Zambia	17-Jun-2006		genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,91V,96L,116A,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
JN014204	ZM201F	Zambia	07-Feb-2003	6	genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,83L,87Q,91V,95H,98D,116A,120S,121T,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JN014205	ZM201F	Zambia	07-Feb-2003	21	genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,83L,87Q,91V,95H,98D,116A,120S,124V,128D,148V,154K,169F,178T,187D,203R,208G
JN014206	ZM201F	Zambia	07-Feb-2003	22	genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,83L,87Q,91V,95H,98D,116A,120S,121T,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JN014207	ZM201F	Zambia	07-Feb-2003	25	genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,83L,87Q,91V,95H,98D,116A,120S,121T,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JN014208	ZM201F	Zambia	07-Feb-2003	26	genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,83L,87Q,91V,95H,98D,116A,120S,121T,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JN014209	ZM201F	Zambia	07-Feb-2003	27	genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,83L,87Q,91V,95H,98D,116A,120S,121T,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JN014210	ZM201F	Zambia	07-Feb-2003	28	genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,83L,87Q,91V,95H,98D,116A,120S,121T,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JN014211	ZM201F	Zambia	07-Feb-2003	29	genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,83L,87Q,91V,95H,98D,116A,120S,121T,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JN014212	ZM201F	Zambia	07-Feb-2003	31	genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,83L,87Q,91V,95H,98D,116A,120S,121T,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JN014213	ZM201F	Zambia	07-Feb-2003	41	genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,83L,87Q,91V,95H,98D,116A,120S,121T,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JN014214	ZM201F	Zambia	07-Feb-2003	49	genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,83L,87Q,91V,95H,98D,116A,120S,121T,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JN014215	ZM201F	Zambia	07-Feb-2003	51	genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,83L,87Q,91V,95H,98D,116A,120S,121T,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JN014216	ZM201F	Zambia	07-Feb-2003	52	genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,83L,87Q,91V,95H,98D,116A,120S,121T,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JN014217	ZM201F	Zambia	07-Feb-2003	53	genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,83L,87Q,91V,95H,98D,116A,120S,121T,124V,128D,148V,154K,169F,178T,187D,203R,208G
JN014218	ZM201F	Zambia	07-Feb-2003	54	genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,83L,87Q,91V,95H,98D,116A,120S,121T,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JN014219	ZM201F	Zambia	07-Feb-2003	55	genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,83L,87Q,91V,95H,98D,116A,120S,121T,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JN014220	ZM201F	Zambia	07-Feb-2003	58	genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,83L,87Q,91V,95H,98D,116A,120S,121T,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JN014221	ZM201F	Zambia	07-Feb-2003	69	genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,83L,87Q,91V,95H,98D,116A,120S,121T,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JN014222	ZM201F	Zambia	07-Feb-2003	79	genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,83L,87Q,91V,95H,98D,116A,120S,121T,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JN014223	ZM201F	Zambia	07-Feb-2003	82	genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,83L,87Q,91V,95H,98D,116A,120S,121T,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JN014224	ZM201F	Zambia	07-Feb-2003	90	genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,83L,87Q,91V,95H,98D,116A,120S,124V,128D,148V,154K,169F,178T,187D,203R,208G
JN014225	ZM201F	Zambia	07-Feb-2003	92	genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,83L,87Q,91V,95H,98D,116A,120S,124V,128D,148V,154K,169F,178T,187D,203R,208G
JN014226	ZM201F	Zambia	07-Feb-2003	95	genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,83L,87Q,91V,95H,98D,116A,120S,121T,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JN014227	ZM201F	Zambia	07-Feb-2003	96	genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,83L,87Q,91V,95H,98D,116A,120S,121T,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JN014228	ZM201F	Zambia	07-Feb-2003	68	genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,79K,83L,87P,91V,95H,98D,116A,120S,124V,128D,148V,154K,169F,175K,178T,184*,187D,203R,208G
JN014229	ZM201F	Zambia	07-Feb-2003	71	genomic RNA	plasma		1	231	6L,23*,27I,41T,45D,50S,54S,59I,71D,80*,83L,91V,96I,100K,106E,116A,117*,128D,137R,148V,154K,163N,167Q,169F,178T,184*,187D,203R,208G,223R
JN014230	ZM201F	Zambia	07-Feb-2003	86	genomic RNA	plasma		1	231	6L,8R,10I,23*,27I,29K,41T,45D,50S,54S,59I,60E,71N,80*,81N,82K,83L,87Q,91V,95H,98D,106R,116A,117*,120S,124V,128D,132K,133*,137R,148V,154K,169F,178T,184*,187D,203R,206R,208G,229K
JN014231	ZM201M	Zambia	07-Feb-2003	6	genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,83L,87Q,91V,95H,98D,116A,120S,121T,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JN014232	ZM201M	Zambia	07-Feb-2003	11	genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,83L,87Q,91V,95H,98D,116A,120S,121T,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JN014233	ZM201M	Zambia	07-Feb-2003	12	genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,83L,87Q,91V,95H,98D,116A,120S,121T,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JN014234	ZM201M	Zambia	07-Feb-2003	13	genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,83L,87Q,91V,95H,98D,116A,120S,121T,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JN014235	ZM201M	Zambia	07-Feb-2003	15	genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,83L,87Q,91V,95H,98D,116A,120S,121T,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JN014236	ZM201M	Zambia	07-Feb-2003	18	genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,83L,87Q,91V,95H,98D,116A,120S,121T,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JN014237	ZM201M	Zambia	07-Feb-2003	21	genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,83L,87Q,91V,95H,98D,116A,120S,121T,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JN014238	ZM201M	Zambia	07-Feb-2003	22	genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,83L,87Q,91V,95H,98D,116A,120S,121T,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JN014239	ZM201M	Zambia	07-Feb-2003	23	genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,83L,87Q,91V,95H,98D,116A,120S,121T,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JN014240	ZM201M	Zambia	07-Feb-2003	25	genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,83L,87Q,91V,94V,95H,98D,116A,120S,121T,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JN014241	ZM201M	Zambia	07-Feb-2003	27	genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,83L,87Q,91V,95H,98D,116A,120S,121T,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JN014242	ZM201M	Zambia	07-Feb-2003	28	genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,83L,87Q,91V,95H,98D,116A,120S,121T,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JN014243	ZM201M	Zambia	07-Feb-2003	29	genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,83L,87Q,91V,95H,98D,116A,120S,121T,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JN014244	ZM201M	Zambia	07-Feb-2003	30	genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,83L,87Q,91V,95H,98D,116A,120S,121T,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JN014245	ZM201M	Zambia	07-Feb-2003	34	genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,83L,87Q,91V,95H,98D,116A,120S,121T,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JN014246	ZM201M	Zambia	07-Feb-2003	36	genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,83L,87Q,91V,95H,98D,116A,120S,121T,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JN014247	ZM201M	Zambia	07-Feb-2003	37	genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,83L,87Q,91V,95H,98D,116A,120S,121T,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JN014248	ZM201M	Zambia	07-Feb-2003	41	genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,83L,87Q,91V,95H,98D,116A,120S,121T,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JN014249	ZM201M	Zambia	07-Feb-2003	45	genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,83L,87Q,91V,95H,98D,116A,120S,121T,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JN014250	ZM201M	Zambia	07-Feb-2003	46	genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,83L,87Q,91V,95H,98D,116A,120S,121T,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JN014251	ZM201M	Zambia	07-Feb-2003	47	genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,83L,87Q,91V,95H,98D,116A,120S,121T,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JN014252	ZM201M	Zambia	07-Feb-2003	48	genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,83L,87Q,91V,95H,98D,116A,120S,121T,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JN014253	ZM201M	Zambia	07-Feb-2003	24	genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,83L,87Q,91V,95H,97K,98N,113K,116A,117*,120S,121T,124V,128D,133*,148V,154K,169F,178T,180D,187D,203R,208G
JN014254	ZM201M	Zambia	07-Feb-2003	43	genomic RNA	plasma		1	231	6L,23*,27I,41T,45D,50S,54S,59I,71D,80*,83L,87Q,91V,95H,98D,106R,116A,120S,121T,124V,128D,133*,148V,154K,156R,169F,178T,180D,187D,203R,208G
KM048731	ZM201M	Zambia	07-Feb-2003		genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,83L,87Q,91V,95H,98D,116A,120S,121T,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
KM048732	ZM201M	Zambia	22-Jul-2003		genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,83L,87Q,91V,95H,98D,116A,120S,121T,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
KM048733	ZM201M	Zambia	21-Jan-2004		genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,83L,87Q,91V,95H,98D,116A,120S,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
KM048734	ZM201M	Zambia	22-Jul-2004		genomic RNA	plasma		1	231	6L,27I,41T,45D,50S,54S,59I,71D,83L,87Q,91V,95H,98D,116A,120S,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
KM048735	ZM202F	Zambia	21-Apr-2004		genomic RNA	plasma		1	231	6P,27I,41T,71D,83L,86I,91V,110S,116A,120G,128D,148V,154K,169F,178T,180D,203R,208G,210S
KM048736	ZM202F	Zambia	08-Oct-2004		genomic RNA	plasma		1	231	5DHY,6P,14P,16ST,27I,41T,71D,83L,86I,91V,110N,116A,120G,128D,148V,154K,169F,178T,180D,203R,208G,210S
KM048737	ZM202F	Zambia	29-Mar-2005		genomic RNA	plasma		1	231	6L,14P,15L,27I,41T,71D,83L,86I,91V,110N,116A,120G,128D,148V,154K,169F,178T,180D,203R,208G,210S
KM048738	ZM202F	Zambia	13-Sep-2005		genomic RNA	plasma		1	231	6ALPV,14P,15L,27I,41T,71D,83L,86I,91V,110N,116A,120G,128D,148V,154K,169F,178T,180D,203R,208G,210S
KM048739	ZM203F	Zambia	27-Jan-2004		genomic RNA	plasma		1	231	6L,14S,15L,27I,58A,71D,91V,96I,116T,124V,128D,148V,154K,169F,178T,180D,187D,208G
KM048740	ZM203F	Zambia	24-Jul-2004		genomic RNA	plasma		1	231	6L,14S,15L,27I,58A,71D,91V,96I,116T,124V,128D,148V,154K,169F,178T,180D,187D,207PT,208G
KM048741	ZM205F	Zambia	27-Mar-2003		genomic RNA	plasma		1	231	6L,14N,27I,41T,71D,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S
KM048742	ZM205F	Zambia	15-Aug-2003		genomic RNA	plasma		1	231	6L,14N,27I,41T,71D,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S
KM048743	ZM205F	Zambia	12-Feb-2004		genomic RNA	plasma		1	231	6L,14N,27I,41T,71D,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S
KM048744	ZM205F	Zambia	06-Aug-2004		genomic RNA	plasma		1	231	6L,14N,27I,41T,71D,116N,120S,128D,148V,154K,169F,178T,180D,187D,203KR,208G,210ST
KM048745	ZM2063F	Zambia	13-May-2008		genomic RNA	plasma		1	231	6L,14S,15L,27I,36I,41T,71D,83L,115V,116A,120S,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
KM048746	ZM2063M	Zambia	22-May-2008		genomic RNA	plasma		1	231	6L,14S,15L,27I,36I,41T,71D,83L,115V,116A,120S,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
KM048747	ZM208F	Zambia	12-Jan-2005		genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,75D,83L,91P,116A,120S,128D,148V,154K,169F,177S,187D,203KR,208G,210S
KM048748	ZM208M	Zambia	12-Jan-2005		genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,75D,83L,91P,116A,120S,128D,148V,154K,169F,177S,187D,203R,208G,210S
KM048749	ZM208M	Zambia	13-Jul-2005		genomic RNA	plasma		1	231	6L,14AS,27I,41T,71D,75D,83L,91P,116A,120S,128D,148V,154K,169F,177S,187D,203R,208G,210S
KM048750	ZM208M	Zambia	12-Jan-2006		genomic RNA	plasma		1	231	6L,14AS,27I,41T,71D,75D,83L,91P,116A,120S,124IV,128D,148V,154K,169F,177S,187D,203R,208G,210S
KM048751	ZM208M	Zambia	01-Jul-2006		genomic RNA	plasma		1	231	6L,14AS,27I,41T,71D,75D,83L,91P,116A,120S,128D,148V,154K,169F,173K,177S,187D,203R,208G,210S
KM048752	ZM208M	Zambia	09-Jan-2007		genomic RNA	plasma		1	231	6L,14AS,27I,41T,71D,75D,83L,91P,116A,120S,124IV,128D,148V,154K,169F,177S,187D,203R,208G,210S
KM048753	ZM213F	Zambia	03-Jul-2003		genomic RNA	plasma		1	231	27I,41T,71D,83L,86A,87Q,96I,116T,120G,124V,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
KM048754	ZM213F	Zambia	09-Feb-2004		genomic RNA	plasma		1	231	27I,41T,71D,83L,86A,87Q,96I,116T,120G,124V,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
KM048755	ZM213F	Zambia	10-Jul-2004		genomic RNA	plasma		1	231	27I,41T,71D,83L,86A,87Q,96I,116T,120G,124V,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
KM048756	ZM213F	Zambia	15-Jan-2005		genomic RNA	plasma		1	231	27I,41T,71D,83L,86A,87Q,96I,116T,120G,124V,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
KM048757	ZM216F	Zambia	17-Jan-2004		genomic RNA	plasma		1	231	6L,14S,15L,27I,41T,71D,83L,116A,120S,124V,148V,154K,169F,171V,177G,180D,187D,203R,208G,210S,225S
KM048758	ZM216M	Zambia	17-Jan-2004		genomic RNA	plasma		1	231	6L,14S,15L,27I,41T,71D,83L,116A,120S,124V,148V,154K,169F,171V,177G,180D,187D,203R,208G,210S,225S
KM048759	ZM217M	Zambia	18-Jul-2003		genomic RNA	plasma		1	231	6L,27I,31G,33N,41T,71D,83L,91V,96I,112A,115IV,116A,118I,128D,148V,154K,169F,178T,180D,187D,203R,208G
KM048760	ZM217M	Zambia	16-Jan-2004		genomic RNA	plasma		1	231	6L,27I,31G,33N,41T,71D,83L,91V,96I,112A,115V,116A,118I,128D,148V,154K,169F,178T,180D,187D,203R,208G
KM048761	ZM217M	Zambia	17-Jul-2004		genomic RNA	plasma		1	231	6L,27I,31G,33N,41T,71D,83L,91V,96I,112A,115V,116A,118I,128D,148V,154K,169F,178T,180D,187D,203R,208G
KM048762	ZM217M	Zambia	10-Feb-2005		genomic RNA	plasma		1	231	6L,27I,31G,33N,41T,71D,83L,91V,96I,112A,115V,116A,118I,128D,148V,154K,169F,178T,180D,187D,203R,208G
KM048763	ZM218F	Zambia	03-Dec-2002		genomic RNA	plasma		1	231	6L,14P,15L,27I,31G,33N,41T,71D,79D,83L,110N,116A,120G,124V,148V,154K,169F,171V,180D,187D,203R,207Q,208G
KM048764	ZM218F	Zambia	04-Apr-2003		genomic RNA	plasma		1	231	6L,14P,15L,27I,31G,33N,41T,71D,79D,83L,110NS,116A,120G,124V,148V,154K,169F,171V,180D,187D,203R,207Q,208G
KM048765	ZM218F	Zambia	19-Sep-2003		genomic RNA	plasma		1	231	6L,14P,15L,27I,31G,33N,41T,71D,79D,83L,110S,116A,120S,124V,148V,154K,169F,171V,180D,187D,203R,207Q,208G,225GS
KM048766	ZM218F	Zambia	02-Mar-2004		genomic RNA	plasma		1	231	6L,14P,15L,27I,31G,33N,41T,71D,79D,83LV,91IV,110S,116A,120S,124V,148V,154K,169F,171V,180D,187D,203R,207Q,208G,225S
KM048767	ZM219F	Zambia	03-Jan-2004		genomic RNA	plasma		1	231	6L,27I,36I,41T,71D,83L,87Q,91V,96I,116A,120H,124V,128D,148V,154K,169F,178T,187D,200S,203R,208G
KM048768	ZM219F	Zambia	26-Jun-2004		genomic RNA	plasma		1	231	6L,27I,36I,41T,71D,83L,87Q,91V,96I,116A,120H,124V,128D,148V,154K,169F,178T,187D,200S,203R,208G
KM048769	ZM219F	Zambia	11-Jan-2005		genomic RNA	plasma		1	231	6L,27I,36I,41T,71D,83L,87Q,91V,96I,116A,120H,124V,128D,148V,154K,169F,178T,187D,200S,203R,208G
KM048770	ZM219F	Zambia	13-Jul-2005		genomic RNA	plasma		1	231	6L,27I,36I,41T,71D,83L,87Q,91V,96I,116A,120H,124V,128D,148V,154K,169F,178T,187D,200S,203R,208G
KM048771	ZM221M	Zambia	07-Mar-2003		genomic RNA	plasma		1	231	6L,15L,27I,41T,71D,83L,96L,116A,124V,128D,148V,169F,178T,187D,203R,208G
KM048772	ZM221M	Zambia	26-Aug-2003		genomic RNA	plasma		1	231	6L,15L,27I,41T,71D,83L,96L,116A,124V,128D,148V,169F,178T,187D,203R,208G
KM048773	ZM221M	Zambia	28-Feb-2004		genomic RNA	plasma		1	231	6L,15L,27I,41T,71D,83L,96L,116A,124V,148V,169F,178T,187D,203R,208G
KM048774	ZM221M	Zambia	24-Sep-2004		genomic RNA	plasma		1	231	6L,15L,27I,41T,71D,83L,96L,116A,124V,148V,169F,178T,187D,203R,208G
KM048775	ZM226M	Zambia	25-Oct-2003		genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,86A,87Q,91H,92P,110N,116A,120S,124V,148V,154K,169F,178T,180D,187D,203R,208G,225S
KM048776	ZM226M	Zambia	22-Apr-2004		genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,86A,87Q,91H,92P,110N,116A,120S,124V,148V,154K,169F,178T,180D,187D,203R,208G,225S
KM048777	ZM226M	Zambia	22-Oct-2004		genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,86A,87Q,91H,92P,110NST,116A,120S,124V,148V,154K,169F,178T,180D,187D,203R,208G,225S
KM048778	ZM226M	Zambia	22-Apr-2005		genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,86A,87Q,91H,92P,116A,120S,124V,148V,154K,169F,178T,180D,187D,203R,208G,225S
KM048779	ZM227M	Zambia	24-Jan-2003		genomic RNA	plasma		1	231	6L,27I,41T,71D,75D,83L,91N,92P,116A,120S,128D,148V,154K,169F,178T,183S,187D,206~,207Q,208G,225S
KM048780	ZM227M	Zambia	10-Jul-2003		genomic RNA	plasma		1	231	6L,27I,41T,71D,75D,83L,91N,92P,116A,120S,128D,148V,154K,169F,178T,183S,187D,206~,207Q,208G
KM048781	ZM227M	Zambia	20-Dec-2003		genomic RNA	plasma		1	231	6L,27I,41T,71D,75D,83L,91N,92P,116A,120S,128D,148V,154K,169F,178T,183S,187D,206~,207Q,208G
KM048782	ZM227M	Zambia	10-Jun-2004		genomic RNA	plasma		1	231	6L,27I,41T,71D,75D,83L,91N,92P,116A,120S,128D,148V,154K,169F,178T,183NS,187D,206~,207Q,208G
KM048783	ZM228M	Zambia	27-Aug-2003		genomic RNA	plasma		1	231	2L,6L,27I,41T,71D,79D,91V,116A,120S,148V,154K,169F,177S,178T,187D,208G,225S
KM048784	ZM228M	Zambia	26-Feb-2004		genomic RNA	plasma		1	231	2L,6L,27I,41T,71D,79D,91V,116A,120S,148V,154K,169F,177S,178T,187D,208G,225S
KM048785	ZM228M	Zambia	25-Aug-2004		genomic RNA	plasma		1	231	2L,6L,27I,41T,71D,79D,91V,116A,120S,148V,154K,169F,177S,178T,187D,208G,225S
KM048786	ZM228M	Zambia	25-Feb-2005		genomic RNA	plasma		1	231	2L,6L,27I,41T,71D,79D,91V,116A,120S,148V,154K,169F,177S,178T,187D,207PS,208G,225S
KM048787	ZM230F	Zambia	16-Apr-2003		genomic RNA	plasma		1	231	6F,14P,15L,27I,31G,33N,41T,71D,83L,110S,116N,120S,128D,135V,148V,154K,169F,178T,187D,203R,208G,210S
KM048788	ZM230F	Zambia	05-Nov-2003		genomic RNA	plasma		1	231	6F,14P,15L,27I,31G,33N,41T,71D,83L,110S,116N,120S,128D,135V,148V,154K,169F,178T,187D,203R,208G,210S
KM048789	ZM230F	Zambia	02-Mar-2004		genomic RNA	plasma		1	231	6F,14P,15L,27I,31G,33N,41T,71D,83L,110S,116N,120S,128D,135V,148V,154K,169F,178T,187D,203R,208G,210S
KM048790	ZM230F	Zambia	27-Nov-2004		genomic RNA	plasma		1	231	6F,14P,15L,27I,31G,33N,41T,71D,83L,110S,116N,120S,128D,135V,148V,154K,169F,178T,187D,203R,208G,210S
KM048791	ZM232M	Zambia	07-Sep-2004		genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,87Q,91V,96V,110N,116A,120S,148V,154K,169F,178T,180D,187D,203R,208G,225S
KM048792	ZM235F	Zambia	20-Dec-2002		genomic RNA	plasma		1	231	6L,15L,41T,71D,83L,91V,116N,148V,153V,154K,169F,171V,177S,178T,187D,204S,207S,208G,225S,230I
KM048793	ZM236M	Zambia	15-Feb-2003		genomic RNA	plasma		1	231	6H,14P,27I,41T,71D,83L,91V,107S,110N,116A,120G,128D,148V,154K,169F,171A,180D,187D,203R,204G,207Q,208G,210S,225S
KM048794	ZM236M	Zambia	18-Jul-2003		genomic RNA	plasma		1	231	6H,14P,27I,41T,71D,83L,91V,107S,110N,116A,120G,128D,148V,154K,169F,171A,180D,187D,203R,204G,207Q,208G,210S,225S
KM048795	ZM236M	Zambia	16-Jan-2004		genomic RNA	plasma		1	231	6H,14P,27I,41T,71D,83L,91V,107S,110N,116A,120G,128D,148V,154K,169F,171A,180D,187D,203R,204G,207Q,208G,210S,225S
KM048796	ZM236M	Zambia	16-Jul-2004		genomic RNA	plasma		1	231	6H,14P,27I,41T,71D,83L,91V,107S,110N,116A,120G,128D,148V,154K,169F,171A,180D,187D,203R,204G,207Q,208G,210S,225S
JN014255	ZM238F	Zambia	29-Oct-2002	12	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,94N,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G,210S
JN014256	ZM238F	Zambia	29-Oct-2002	2	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,94N,116A,120S,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S
JN014257	ZM238F	Zambia	29-Oct-2002	20	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,94N,116A,120S,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S
JN014258	ZM238F	Zambia	29-Oct-2002	25	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,94N,116A,120S,124V,128D,148V,169F,178T,180D,203R,208G,210S
JN014259	ZM238F	Zambia	29-Oct-2002	27	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,94N,116A,120S,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S
JN014260	ZM238F	Zambia	29-Oct-2002	33	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,94N,116A,120S,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S
JN014261	ZM238F	Zambia	29-Oct-2002	36	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,94N,116A,120S,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S
JN014262	ZM238F	Zambia	29-Oct-2002	40	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,94N,116A,120S,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S
JN014263	ZM238F	Zambia	29-Oct-2002	43	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,94N,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G,210S
JN014264	ZM238F	Zambia	29-Oct-2002	48	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,94N,116A,120S,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S
JN014265	ZM238F	Zambia	29-Oct-2002	54	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,94N,116A,120S,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S
JN014266	ZM238F	Zambia	29-Oct-2002	62	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,94N,116A,120S,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S
JN014267	ZM238F	Zambia	29-Oct-2002	64	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,94N,116A,120S,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S
JN014268	ZM238F	Zambia	29-Oct-2002	73	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,94N,116A,120S,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S
JN014269	ZM238F	Zambia	29-Oct-2002	74	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,94N,116A,120S,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S
JN014270	ZM238F	Zambia	29-Oct-2002	81	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,94N,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G,210S
JN014271	ZM238F	Zambia	29-Oct-2002	84	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,94N,116A,120S,124V,128D,148V,169F,178T,180D,203R,208G,210S
JN014272	ZM238F	Zambia	29-Oct-2002	89	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,94N,116A,120S,124V,128D,148V,169F,178T,180D,203R,208G,210S
JN014273	ZM238F	Zambia	29-Oct-2002	88	genomic RNA	plasma		1	231	6L,8R,23*,27I,41T,60K,71D,80*,83L,94N,96I,116A,117*,120S,124V,128D,133*,148V,156R,169F,178T,180D,184*,187D,203R,208E,210S
JN014274	ZM238M	Zambia	29-Oct-2002	10	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,94N,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G,210S
JN014275	ZM238M	Zambia	29-Oct-2002	11	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,94N,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G,210S
JN014276	ZM238M	Zambia	29-Oct-2002	14	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,94N,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G,210S
JN014277	ZM238M	Zambia	29-Oct-2002	17	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,94N,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G,210S
JN014278	ZM238M	Zambia	29-Oct-2002	18	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,94N,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G,210S
JN014279	ZM238M	Zambia	29-Oct-2002	19	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,94N,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G,210S
JN014280	ZM238M	Zambia	29-Oct-2002	25	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,94N,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G,210S
JN014281	ZM238M	Zambia	29-Oct-2002	27	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,94N,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G,210S
JN014282	ZM238M	Zambia	29-Oct-2002	30	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,94N,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G,210S
JN014283	ZM238M	Zambia	29-Oct-2002	33	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,94N,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G,210S
JN014284	ZM238M	Zambia	29-Oct-2002	37	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,94N,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G,210S
JN014285	ZM238M	Zambia	29-Oct-2002	45	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,94N,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G,210S
JN014286	ZM238M	Zambia	29-Oct-2002	58	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,94N,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G,210S
JN014287	ZM238M	Zambia	29-Oct-2002	6	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,94N,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G,210S
JN014288	ZM238M	Zambia	29-Oct-2002	60	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,94N,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G,210S
JN014289	ZM238M	Zambia	29-Oct-2002	66	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,94N,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G,210S
JN014290	ZM238M	Zambia	29-Oct-2002	67	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,94N,116A,120S,124V,128D,148V,169F,178T,187D,197A,203R,208G,210S
JN014291	ZM238M	Zambia	29-Oct-2002	68	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,94N,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G,210S
JN014292	ZM238M	Zambia	29-Oct-2002	69	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,94N,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G,210S
JN014293	ZM238M	Zambia	29-Oct-2002	70	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,94N,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G,210S
JN014294	ZM238M	Zambia	29-Oct-2002	8	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,94N,114P,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G,210S
JN014295	ZM238M	Zambia	29-Oct-2002	9	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,94N,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G,210S
KM048797	ZM239F	Zambia	20-Jan-2004		genomic RNA	plasma		1	231	6L,14S,15L,41T,71D,83A,91V,116A,120S,124V,148V,154K,169F,178T,180D,187D,191I,207S,208G,210S,211V,225S
KM048798	ZM239F	Zambia	21-Jul-2004		genomic RNA	plasma		1	231	6L,15L,41T,71D,83AT,91V,116A,120S,124V,148V,154K,169F,178T,180D,187D,191I,207S,208G,210S,211V,225S
KM048799	ZM239F	Zambia	19-Jan-2005		genomic RNA	plasma		1	231	6L,15L,41T,71D,83T,91V,116A,120S,124V,148V,154K,169F,178T,180D,187D,191I,207S,208G,210S,211V,225S,230IV
KM048800	ZM239F	Zambia	12-Jul-2005		genomic RNA	plasma		1	231	6L,15L,41T,71D,83T,91V,116A,120S,124V,148V,154K,169F,178T,180D,187D,191I,207S,208G,210S,211V,225S,230I
KM048801	ZM240F	Zambia	05-Nov-2003		genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,91V,116T,120S,128D,148V,153IV,154K,169F,171IT,177S,178T,203R,204G,207T,208G,225S
KM048802	ZM240F	Zambia	05-Nov-2004		genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,91V,116T,120S,128D,148V,154K,169F,177S,178T,203R,204G,207T,208G,225S
KM048803	ZM240F	Zambia	05-May-2005		genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,91V,116T,120S,128D,148V,154K,169F,177S,178T,203R,204G,207T,208G,225S
KM048804	ZM241M	Zambia	01-Mar-2003		genomic RNA	plasma		1	231	6L,11T,14P,27I,41T,54V,71D,83L,91V,96L,116A,124V,128D,135V,148V,154K,169F,178T,180D,208G,210S,225S
JN014296	ZM242F	Zambia	25-Jan-2003	11	genomic RNA	plasma		1	231	6H,14P,27I,41T,54S,58I,71D,72A,83L,91N,93L,116A,148V,169F,178T,203R
JN014297	ZM242F	Zambia	25-Jan-2003	17	genomic RNA	plasma		1	231	6H,14P,27I,41T,54S,58I,71D,72A,83L,91N,116A,148V,169F,178T,203R
JN014298	ZM242F	Zambia	25-Jan-2003	19	genomic RNA	plasma		1	231	6H,14P,27I,41T,54S,58I,71D,72A,83L,91N,116A,148V,169F,178T,203R
JN014299	ZM242F	Zambia	25-Jan-2003	20	genomic RNA	plasma		1	231	6H,14P,27I,41T,54S,58I,71D,72A,83L,91N,116A,148V,169F,178T,203R
JN014300	ZM242F	Zambia	25-Jan-2003	21	genomic RNA	plasma		1	231	6H,14P,27I,41T,54S,58I,71D,72A,83L,91N,116A,148V,169F,178T,203R
JN014301	ZM242F	Zambia	25-Jan-2003	22	genomic RNA	plasma		1	231	6H,14P,27I,41T,54S,58I,71D,72A,83L,91N,116A,148V,169F,178T,203R
JN014302	ZM242F	Zambia	25-Jan-2003	23	genomic RNA	plasma		1	231	6H,14P,27I,41T,54S,58I,71D,72A,83L,91N,116A,148V,169F,178T,203R
JN014303	ZM242F	Zambia	25-Jan-2003	25	genomic RNA	plasma		1	231	6H,14P,27I,41T,54S,58I,71D,72A,83L,91N,116A,148V,169F,178T,203R
JN014304	ZM242F	Zambia	25-Jan-2003	26	genomic RNA	plasma		1	231	6H,14P,27I,41T,54S,58I,71D,72A,83L,91N,116A,148V,169F,178T,203R
JN014305	ZM242F	Zambia	25-Jan-2003	27	genomic RNA	plasma		1	231	6H,14P,27I,41T,54S,58I,71D,72A,83L,91N,116A,148V,169F,178T,203R
JN014306	ZM242F	Zambia	25-Jan-2003	30	genomic RNA	plasma		1	231	6H,14P,27I,41T,54S,58I,71D,72A,83L,91N,116A,148V,169F,178T,203R
JN014307	ZM242F	Zambia	25-Jan-2003	34	genomic RNA	plasma		1	231	6H,14P,27I,41T,54S,58I,71D,72A,83L,91N,116A,148V,169F,178T,203R
JN014308	ZM242F	Zambia	25-Jan-2003	35	genomic RNA	plasma		1	231	6H,14P,27I,41T,54S,58I,71D,72A,83L,91N,98G,116A,148V,169F,178T,203R
JN014309	ZM242F	Zambia	25-Jan-2003	40	genomic RNA	plasma		1	231	6H,14P,27I,41T,54S,58I,71D,72A,83L,91N,116A,148V,169F,178T,203R
JN014310	ZM242F	Zambia	25-Jan-2003	41	genomic RNA	plasma		1	231	6H,14P,27I,41T,54S,58I,71D,72A,83L,91N,116A,148V,169F,178T,203R
JN014311	ZM242F	Zambia	25-Jan-2003	43	genomic RNA	plasma		1	231	6H,14P,27I,41T,54S,58I,71D,72A,83L,91N,116A,148V,169F,178T,203R
JN014312	ZM242F	Zambia	25-Jan-2003	44	genomic RNA	plasma		1	231	6H,14P,27I,41T,54S,58I,71D,72A,83L,91N,116A,148V,169F,178T,203R
JN014313	ZM242F	Zambia	25-Jan-2003	46	genomic RNA	plasma		1	231	6H,14P,27I,41T,54S,58I,71D,72A,83L,91N,116A,148V,169F,178T,203R
JN014314	ZM242F	Zambia	25-Jan-2003	6	genomic RNA	plasma		1	231	6H,14P,27I,41T,54S,58I,71D,72A,83L,91N,116A,148V,169F,178T,203R
JN014315	ZM242F	Zambia	25-Jan-2003	67	genomic RNA	plasma		1	231	6H,14P,27I,41T,54S,58I,71D,72A,83L,116A,120G,148V,169F,178T,203R
JN014316	ZM242F	Zambia	25-Jan-2003	9	genomic RNA	plasma		1	231	6H,14P,27I,41T,54S,58I,71D,72A,83L,91N,103N,116A,148V,169F,175K,178T,203R
JN014317	ZM242F	Zambia	25-Jan-2003	42	genomic RNA	plasma		1	231	6H,14P,27I,41T,51N,54S,58I,71D,72A,83L,91N,96I,97K,106E,116A,118I,127K,128K,148V,169F,178T,203R,213K,228T
KM048805	ZM242F	Zambia	25-Jan-2003		genomic RNA	plasma		1	231	6H,14P,27I,41T,54S,58I,71D,72A,83L,91N,116A,148V,169F,178T,203R
KM048806	ZM242F	Zambia	19-Jul-2003		genomic RNA	plasma		1	231	6H,27I,41T,54S,58I,71D,72A,83L,91N,116A,148V,169F,178T,203R
KM048807	ZM242F	Zambia	03-Jan-2003		genomic RNA	plasma		1	231	6H,27I,41T,54S,58I,71D,72A,83L,91N,116A,148V,169F,178T,203R
KM048808	ZM242F	Zambia	13-Jul-2004		genomic RNA	plasma		1	231	6H,27I,41T,54S,58I,71D,72A,83L,91N,116A,148V,169F,178T,203R
JN014318	ZM242M	Zambia	25-Jan-2003	11	genomic RNA	plasma		1	231	6H,14P,27I,41T,54S,58I,71D,72A,83L,116A,128D,148V,169F,178T,180D,203R
JN014319	ZM242M	Zambia	25-Jan-2003	2	genomic RNA	plasma		1	231	6H,14P,27I,41T,54S,58I,71D,72A,83L,116A,120G,148V,169F,178T,203R
JN014320	ZM242M	Zambia	25-Jan-2003	28	genomic RNA	plasma		1	231	6H,14P,18K,27I,28K,35K,41T,54S,58I,71D,72A,75K,83L,116A,120G,148V,169F,175K,178T,203R
JN014321	ZM242M	Zambia	25-Jan-2003	3	genomic RNA	plasma		1	231	6H,14P,27I,41T,54S,58I,71D,72A,83L,116A,148V,169F,178T,203R
JN014322	ZM242M	Zambia	25-Jan-2003	31	genomic RNA	plasma		1	231	6H,14P,27I,41T,54S,58I,71D,72A,83L,116A,120G,148V,169F,178T,183I,203R
JN014323	ZM242M	Zambia	25-Jan-2003	34	genomic RNA	plasma		1	231	6H,14P,27I,41T,54S,58I,71D,72A,83L,116A,120G,148V,169F,178T,203R
JN014324	ZM242M	Zambia	25-Jan-2003	37	genomic RNA	plasma		1	231	6H,14P,27I,41T,54S,58I,71D,72A,83L,116A,120G,148V,169F,178T,203R
JN014325	ZM242M	Zambia	25-Jan-2003	39	genomic RNA	plasma		1	231	6H,14P,27I,41T,54S,58I,71D,72A,83L,116A,120G,148V,169F,178T,203R
JN014326	ZM242M	Zambia	25-Jan-2003	42	genomic RNA	plasma		1	231	6H,14P,27I,41T,54S,58I,71D,72A,83L,116A,120G,148V,169F,178T,203R
JN014327	ZM242M	Zambia	25-Jan-2003	44	genomic RNA	plasma		1	231	6H,14P,27I,41T,54S,58I,71D,72A,83L,116A,120G,148V,169F,178T,203R
JN014328	ZM242M	Zambia	25-Jan-2003	47	genomic RNA	plasma		1	231	6H,14P,27I,41T,54S,58I,71D,72A,83L,116A,148V,169F,178T,203R
JN014329	ZM242M	Zambia	25-Jan-2003	49	genomic RNA	plasma		1	231	6H,14P,27I,41T,54S,58I,71D,72A,83L,116A,120G,148V,169F,178T,203R
JN014330	ZM242M	Zambia	25-Jan-2003	5	genomic RNA	plasma		1	231	6H,14P,27I,41T,54S,58I,71D,72A,83L,116A,148V,169F,178T,203R
JN014331	ZM242M	Zambia	25-Jan-2003	51	genomic RNA	plasma		1	231	6H,14P,27I,41T,54S,58I,71D,72A,83L,116A,128D,148V,169F,178T,203R
JN014332	ZM242M	Zambia	25-Jan-2003	52	genomic RNA	plasma		1	231	6H,14P,27I,41T,54S,58I,71D,72A,83L,116A,120G,148V,169F,178T,203R
JN014333	ZM242M	Zambia	25-Jan-2003	55	genomic RNA	plasma		1	231	6H,14P,27I,41T,54S,58I,71D,72A,83L,91N,96L,116A,148V,169F,178T,203R
JN014334	ZM242M	Zambia	25-Jan-2003	60	genomic RNA	plasma		1	231	6H,14P,27I,41T,54S,58I,71D,72A,83L,91N,96L,116A,148V,169F,178T,203R
JN014335	ZM242M	Zambia	25-Jan-2003	64	genomic RNA	plasma		1	231	6H,14P,27I,41T,54S,58I,71D,72A,83L,116A,148V,169F,178T,203R
JN014336	ZM242M	Zambia	25-Jan-2003	67	genomic RNA	plasma		1	231	6H,14P,27I,41T,54S,58I,71D,72A,83L,116A,120G,148V,169F,178T,203R
JN014337	ZM242M	Zambia	25-Jan-2003	69	genomic RNA	plasma		1	231	6H,14P,27I,41T,54S,58I,71D,72A,83L,116A,120G,148V,169F,178T,203R
JN014338	ZM242M	Zambia	25-Jan-2003	7	genomic RNA	plasma		1	231	6H,14P,27I,41T,54S,58I,71D,72A,83L,91N,116A,148V,169F,178T,203R
JN014339	ZM242M	Zambia	25-Jan-2003	70	genomic RNA	plasma		1	231	6H,14P,27I,41T,54S,58I,71D,72A,83L,116A,120G,148V,169F,178T,203R
JN014340	ZM242M	Zambia	25-Jan-2003	73	genomic RNA	plasma		1	231	6H,14P,27I,41T,54S,58I,71D,72A,83L,116A,120G,148V,169F,178T,203R
JN014341	ZM242M	Zambia	25-Jan-2003	29	genomic RNA	plasma		1	231	6H,14P,27I,41T,54S,58I,71D,72A,83L,100K,116A,127R,148V,169F,178T,203R
KM048809	ZM243F	Zambia	09-Mar-2004		genomic RNA	plasma		1	231	6M,27I,41T,47C,71D,83L,91P,116A,120S,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
KM048810	ZM243F	Zambia	03-Sep-2004		genomic RNA	plasma		1	231	6M,27I,41T,47C,71D,83L,91P,116A,120S,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
KM048811	ZM243F	Zambia	02-Mar-2005		genomic RNA	plasma		1	231	6M,27I,41T,47C,71D,83L,91P,116A,120S,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
KM048812	ZM243F	Zambia	27-Aug-2005		genomic RNA	plasma		1	231	6M,27I,41T,47C,71D,83L,91P,116A,120S,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
KM048813	ZM244M	Zambia	16-Oct-2003		genomic RNA	plasma		1	231	6L,14AP,27I,41T,71D,83L,110S,116A,120G,124V,128D,148V,169F,171C,178T,180D,203R
KM048814	ZM244M	Zambia	12-Jun-2004		genomic RNA	plasma		1	231	6L,14AP,27I,41T,71D,83L,110S,116A,120G,124V,128D,148V,169F,171C,178T,180D,203R
KM048815	ZM244M	Zambia	10-Dec-2004		genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,110S,116A,120G,121T,124V,128D,148V,169F,171C,178T,180D,203R
KM048816	ZM244M	Zambia	11-Mar-2005		genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,110S,116A,120G,121T,124V,128D,148V,169F,171C,178T,180D,203R
KM048817	ZM251F	Zambia	17-Aug-2004		genomic RNA	plasma		1	231	6A,11I,12Y,15L,27I,31N,36I,41T,50S,71D,83L,91A,116A,120S,128D,148V,154K,169F,178T,180D,187D,191I,203R,208G,210S,225S
KM048818	ZM251F	Zambia	15-Feb-2005		genomic RNA	plasma		1	231	6A,11I,12Y,15L,27I,31N,36I,41T,50S,71D,83L,91A,116A,120S,128D,148V,154K,169F,178T,180D,187D,191I,203R,208G,210S,225S
KM048819	ZM251F	Zambia	10-Nov-2005		genomic RNA	plasma		1	231	6AT,11I,12Y,15L,27I,31N,36I,41T,50S,71D,83L,91A,116A,120S,128D,148V,154K,169F,178T,180D,187D,191I,203R,208G,210S,225S
KM048820	ZM251F	Zambia	03-Feb-2006		genomic RNA	plasma		1	231	6A,11I,12Y,15L,27I,31N,36I,41T,50S,71D,83L,91A,116A,120S,128D,148V,154K,169F,178T,180D,187D,191I,203R,208G,210S,225S
KM048822	ZM252F	Zambia	28-Aug-2004		genomic RNA	plasma		1	231	6L,14P,15L,27I,41T,71D,83L,87Q,91V,98D,110N,116A,120S,128D,148V,154K,169F,178T,187D,203R,208G,210S,225S,229K
KM048823	ZM252F	Zambia	12-Feb-2005		genomic RNA	plasma		1	231	6L,14P,15L,27I,41T,71D,83L,87Q,91V,98D,110N,116A,120S,128D,148V,154KR,169F,178T,187D,203R,208G,210S,229KR
KM048824	ZM252F	Zambia	30-Aug-2005		genomic RNA	plasma		1	231	6L,14P,15L,27I,41T,71D,83L,87Q,91V,98D,110NT,116A,120S,128D,148V,169F,178T,187D,203R,208G,210S
KM048825	ZM252F	Zambia	02-Mar-2006		genomic RNA	plasma		1	231	6L,14P,15L,27I,41T,71D,83L,87Q,91V,98D,116A,120S,128D,148V,169F,178T,187D,203R,208G,210S
KM048826	ZM252F	Zambia	29-Aug-2006		genomic RNA	plasma		1	231	6L,14P,15L,27I,41T,71D,83L,87Q,91V,98D,116A,120S,128D,148V,169F,178T,187D,203R,208G,210S
KM048821	ZM252M	Zambia	28-Aug-2004		genomic RNA	plasma		1	231	6L,14P,15L,27I,41T,71D,83L,87Q,91V,98D,110N,116A,120S,128D,148V,154K,169F,178T,187D,203R,208G,210S,225S
KM048827	ZM254F	Zambia	06-Oct-2004		genomic RNA	plasma		1	231	6L,27I,36I,41T,45D,54S,71D,83L,87Q,91V,96L,112A,116A,120H,128D,148V,154K,160PS,169F,178T,180D,187D,191I,203R,208G
KM048828	ZM254F	Zambia	18-Mar-2005		genomic RNA	plasma		1	231	6L,27I,36I,41T,45D,54S,71D,83L,87Q,91V,96L,112A,116A,120H,128D,148V,154K,169F,178T,180D,187D,191I,203R,208G
KM048829	ZM254F	Zambia	06-Oct-2005		genomic RNA	plasma		1	231	6L,27I,36I,41T,45D,54S,71D,83L,87Q,91V,96L,112A,116A,120H,128D,148V,154K,169F,178T,180D,187D,191I,203R,207*PQS,208G
KM048830	ZM254F	Zambia	28-Mar-2006		genomic RNA	plasma		1	231	6L,27I,36I,41T,45D,54S,71D,83L,87Q,91V,96L,112A,116A,120H,128D,148V,154K,169F,178T,180D,187D,191I,203R,207X,208G
KM048831	ZM258F	Zambia	08-Mar-2003		genomic RNA	plasma		1	231	6L,14P,15L,27I,41T,71D,83L,91V,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G,210S,225S
KM048832	ZM258F	Zambia	05-Sep-2003		genomic RNA	plasma		1	231	6L,14P,15L,27I,41T,71D,83L,91V,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G,210S,225S
KM048833	ZM258F	Zambia	06-Mar-2004		genomic RNA	plasma		1	231	6L,14P,15L,27I,41T,71D,83L,91V,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G,210S,225S
KM048834	ZM258F	Zambia	03-Sep-2004		genomic RNA	plasma		1	231	6L,14P,15L,27I,41T,71D,83L,91V,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G,210S,225S
KM048835	ZM264F	Zambia	15-Apr-2004		genomic RNA	plasma		1	231	6L,27I,36I,41T,71D,83L,87Q,91V,98D,107S,116A,120S,124V,128D,148V,154K,169F,178T,180D,203R,225S
KM048836	ZM264F	Zambia	15-Oct-2004		genomic RNA	plasma		1	231	6L,27I,36I,41T,71D,83L,87Q,91V,98D,116A,120S,124V,128D,148V,154K,169F,178T,180D,203R,225S
KM048837	ZM264F	Zambia	14-Apr-2005		genomic RNA	plasma		1	231	6L,27I,36I,41T,71D,83L,87Q,91V,98D,107ST,116A,120S,124V,128D,148V,154K,169F,178T,180D,203R,225S
KM048838	ZM264F	Zambia	09-Nov-2005		genomic RNA	plasma		1	231	6L,27I,36I,41T,71D,83L,87Q,91V,98D,116A,120S,124V,128D,148V,154K,169F,178T,180D,203R,225S
KM048839	ZM266F	Zambia	10-Sep-2003		genomic RNA	plasma		1	231	6L,15L,16T,27I,41T,71D,83L,116A,120S,124V,148V,152E,154K,169F,170R,171V,180D,187D,207S,208G,225GS,229KR
KM048840	ZM266F	Zambia	10-Mar-2004		genomic RNA	plasma		1	231	6L,15L,16T,27I,41T,71D,83L,116A,120S,124V,148V,152E,154K,160PT,169F,170KR,171V,180D,187D,207S,208G
KM048841	ZM266F	Zambia	13-Oct-2004		genomic RNA	plasma		1	231	6L,15L,16T,27I,41T,71D,83L,116A,120S,124V,148V,152E,154K,160PT,169F,170KR,171V,180D,187D,207S,208G
KM048842	ZM266F	Zambia	23-Mar-2005		genomic RNA	plasma		1	231	6L,15L,16T,27I,41T,71D,83L,96IM,116A,120S,124V,148V,152E,154K,169F,171V,180D,187D,207S,208G
KM048843	ZM268M	Zambia	14-Feb-2004		genomic RNA	plasma		1	231	6L,14P,15L,27I,31G,33N,41T,71D,83M,87Q,96I,110N,116A,128D,135V,148V,154K,169F,178T,187D,203R,208G
KM048844	ZM268M	Zambia	13-Aug-2004		genomic RNA	plasma		1	231	6L,14P,15L,27I,31G,33N,41T,71D,83IMV,87Q,96I,110N,116A,128D,135V,148V,154K,169F,178T,187D,203R,208G
KM048845	ZM268M	Zambia	11-Feb-2005		genomic RNA	plasma		1	231	6L,14P,15L,27I,31G,33N,41T,71D,83LV,87Q,96I,110N,116A,128D,135V,148V,154K,169F,178T,187D,203R,208G
KM048846	ZM268M	Zambia	12-Aug-2005		genomic RNA	plasma		1	231	6L,14P,15L,27I,31G,33N,41T,71D,83LV,87Q,96I,116A,128D,135V,148V,154K,169F,178T,187D,203R,208G
KM048847	ZM270F	Zambia	30-Jun-2004		genomic RNA	plasma		1	231	6L,27I,41T,71D,91IV,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
KM048848	ZM270F	Zambia	14-Jan-2005		genomic RNA	plasma		1	231	6L,27I,41T,71D,91IV,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
KM048849	ZM270F	Zambia	06-Jul-2005		genomic RNA	plasma		1	231	6L,27I,41T,71D,83IV,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
KM048850	ZM270F	Zambia	24-Jan-2006		genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
KM048851	ZM272M	Zambia	18-Oct-2003		genomic RNA	plasma		1	231	6H,15V,41T,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,210S,225S
KM048852	ZM274F	Zambia	03-Nov-2004		genomic RNA	plasma		1	231	6L,15L,27I,41T,71D,83L,91V,96L,113D,116A,120A,148V,169F,178T,187D,203R,208G
KM048853	ZM274F	Zambia	09-Apr-2005		genomic RNA	plasma		1	231	6L,15L,27I,41T,71D,83L,91V,96L,113D,116A,120A,148V,169F,178T,187D,203R,208G
KM048854	ZM274F	Zambia	22-Oct-2005		genomic RNA	plasma		1	231	6L,15L,27I,41T,71D,83LV,91V,96L,113D,116A,120A,148V,169F,178T,187D,203R,208G
KM048855	ZM274F	Zambia	08-Apr-2006		genomic RNA	plasma		1	231	6L,15L,27I,41T,71D,91V,96L,113D,116A,120A,148V,169F,178T,187D,203R,208G
KM048856	ZM276F	Zambia	03-Dec-2004		genomic RNA	plasma		1	231	6L,14P,15L,41T,50A,83L,87Q,91H,92P,93A,107S,116A,120S,128D,148V,154K,169F,171A,178T,180D,187D,203R,204G,208G,225S
KM048857	ZM276F	Zambia	03-Jun-2005		genomic RNA	plasma		1	231	6L,14P,15L,41T,50A,83L,87Q,91H,92P,93A,107S,116A,120S,128D,148V,154K,169F,171A,178T,180D,187D,203R,204G,208G,225S
KM048858	ZM276F	Zambia	01-Dec-2005		genomic RNA	plasma		1	231	6L,14PS,15L,41T,50A,83L,87Q,91H,92P,93A,107S,116A,120S,124IV,128D,148V,154K,169F,171A,178T,180D,187D,203R,204G,208G,225S
KM048859	ZM276F	Zambia	26-May-2006		genomic RNA	plasma		1	231	6L,14S,15L,41T,50A,83L,87Q,91H,92P,93A,107S,116A,120S,124V,128D,148V,154K,169F,171A,178T,180D,187D,203R,204G,208G,225S
KM048860	ZM278F	Zambia	29-Jan-2005		genomic RNA	plasma		1	231	6L,15L,27I,41T,50AT,71D,83L,91N,92P,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
KM048861	ZM278M	Zambia	29-Jan-2005		genomic RNA	plasma		1	231	6L,15L,27I,41T,50T,71D,83L,91N,92P,110N,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
KM048862	ZM280F	Zambia	26-Feb-2005		genomic RNA	plasma		1	231	6L,14N,27I,41T,71D,83L,91N,92P,116A,120G,121T,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
KM048863	ZM280F	Zambia	01-Sep-2005		genomic RNA	plasma		1	231	6L,14ADNT,27I,41T,71D,83L,91N,116A,120G,121T,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
KM048864	ZM280F	Zambia	01-Mar-2006		genomic RNA	plasma		1	231	6L,14N,27I,41T,71D,83L,91N,116A,120G,121T,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
KM048865	ZM287F	Zambia	13-May-2005		genomic RNA	plasma		1	231	6L,14P,41T,50D,71D,83L,116A,120S,124V,128D,148V,154K,169F,178T,183H,191A,203R,208G,225S
KM048866	ZM287M	Zambia	13-May-2005		genomic RNA	plasma		1	231	6L,14P,41T,50D,71D,83L,116A,120S,124V,128D,148V,154K,169F,178T,183H,203R,208G,225S
KM048867	ZM292F	Zambia	24-May-2005		genomic RNA	plasma		1	231	6L,14T,15L,27I,31G,41T,45D,54S,58I,71D,83I,91V,116T,120S,124V,128D,148V,154K,169F,178T,187D,203R,208G
KM048868	ZM292M	Zambia	24-May-2005		genomic RNA	plasma		1	231	6L,14T,15L,27I,31G,41T,45D,54S,58I,71D,83M,91V,116T,120S,124V,128D,148V,154K,169F,178T,187D,203R,208G
KM048870	ZM310F	Zambia	21-Sep-2005		genomic RNA	plasma		1	231	3I,6L,10H,27I,41T,50F,54I,71D,83I,91V,116A,120G,128D,135V,148V,154K,169F,178T,180D,187D,191I,203R,208G,210S
KM048871	ZM310F	Zambia	21-Dec-2005		genomic RNA	plasma		1	231	3I,6L,10H,27I,41T,50F,54I,71D,83I,91V,116A,120G,128D,135V,148V,154K,169F,178T,180D,187D,191I,203R,208G,210S
KM048872	ZM310F	Zambia	24-Mar-2006		genomic RNA	plasma		1	231	3I,6L,10H,27I,41T,50F,54I,71D,83I,91V,116A,120G,128D,135V,148V,154K,169F,178T,180D,183KN,184RW,187D,191I,203R,208G,210S
KM048873	ZM310F	Zambia	14-Jul-2006		genomic RNA	plasma		1	231	3I,6L,10H,27I,41T,50F,54I,71D,83I,91V,116A,120G,128D,135V,148V,154K,169F,178T,180D,187D,191I,203R,208G,210S
KM048874	ZM310F	Zambia	30-Sep-2006		genomic RNA	plasma		1	231	3I,6L,10H,27I,41T,50F,54I,71D,83I,91V,116A,120G,128D,135V,148V,154K,169F,178T,180D,187D,191I,203R,208G,210S
KM048875	ZM310F	Zambia	17-Mar-2007		genomic RNA	plasma		1	231	3I,6L,10HQ,14AS,27I,41T,50F,54I,71D,83I,91V,116A,120G,128D,135V,148V,154K,169F,178T,180D,187D,191I,203R,208G,210S
KM048876	ZM310F	Zambia	24-Nov-2007		genomic RNA	plasma		1	231	3I,6L,10HQ,14AS,27I,41T,50F,54I,71D,83I,91V,116A,120GS,128D,135V,148V,154K,169F,178T,180D,187DE,191I,203R,208G,210S
KM048869	ZM310M	Zambia	29-Sep-2005		genomic RNA	plasma		1	231	3I,6L,10H,27I,41T,50X,54IT,71D,83IL,91IV,116A,120G,128D,135IV,148V,154K,169F,178T,180D,187D,191IV,203R,208G,210S
KM048878	ZM312F	Zambia	07-Oct-2005		genomic RNA	plasma		1	231	6L,14S,27I,41T,71D,83L,91V,96L,116A,124V,128D,148V,154K,169F,171I,180D,187D,203R,204G,207Q,208G,210S,225S
KM048879	ZM312F	Zambia	13-Jan-2006		genomic RNA	plasma		1	231	6L,14S,27I,41T,71D,83L,91V,96L,116A,124V,128D,148V,154K,169F,171I,180D,187D,203R,204G,207Q,208G,210S,225S
KM048880	ZM312F	Zambia	05-Apr-2006		genomic RNA	plasma		1	231	6L,14S,27I,41T,71D,83L,91V,96L,116A,124V,128D,148V,154K,169F,171I,180D,187D,203R,204G,207Q,208G,210S,225S
KM048881	ZM312F	Zambia	06-Jul-2006		genomic RNA	plasma		1	231	6L,14S,27I,41T,71D,83L,91V,96L,116A,124V,128D,148V,154K,169F,171I,180D,187D,203R,204G,207Q,208G,210S,225S
KM048882	ZM312F	Zambia	18-Oct-2006		genomic RNA	plasma		1	231	6L,14S,27I,41T,71D,83L,91V,96L,116A,124V,128D,148V,154K,169F,171I,180D,187D,203R,204G,207Q,208G,210S,225S
KM048883	ZM312F	Zambia	04-Apr-2007		genomic RNA	plasma		1	231	6L,14S,27I,41T,71D,83L,91V,96L,116A,124V,128D,148V,154K,169F,171I,180D,187D,203R,204G,207Q,208G,210S,225S
KM048884	ZM312F	Zambia	21-Sep-2007		genomic RNA	plasma		1	231	6L,14S,27I,41T,71D,83L,91V,96L,116A,124V,128D,148V,154K,169F,171I,180D,187D,203R,204G,207Q,208G,210S,225S
KM048877	ZM312M	Zambia	07-Oct-2005		genomic RNA	plasma		1	231	6L,14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,148V,154K,169F,171INT,172I,179IKT,180DE,187D,203R,204G,207Q,208G,210S,225S,230I
KM048886	ZM314F	Zambia	26-Oct-2005		genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,87P,116A,120K,121Q,128D,148V,154K,169F,177S,187D,203R,208G,225S
KM048887	ZM314F	Zambia	20-Jan-2006		genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,87P,116A,120K,121Q,128D,148V,154K,169F,177S,187D,203R,208G,225S
KM048888	ZM314F	Zambia	26-Apr-2006		genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,87P,116A,120K,121Q,128D,148V,154K,169F,177S,187D,203R,208G,225S
KM048889	ZM314F	Zambia	07-Jul-2006		genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,87P,116A,120K,121Q,128D,148V,154K,169F,177S,187D,203R,208G,225S
KM048885	ZM314M	Zambia	26-Oct-2005		genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,87Q,96I,116T,121Q,128D,136LM,148V,154K,169F,177AS,178T,187D,203R,208G,225S
KM048890	ZM319F	Zambia	30-Nov-2005		genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,91N,92P,120G,128D,148V,169F,171CFGV,178T,180D,203R
KM048891	ZM319M	Zambia	30-Nov-2005		genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,91N,92P,120G,128D,148V,169F,171CFGV,178T,180D,203R
KM048892	ZM319M	Zambia	23-Feb-2006		genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,91N,92P,120G,128D,148V,169F,171C,178T,180D,203R
KM048893	ZM319M	Zambia	30-May-2006		genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,91N,92P,120S,128D,148V,169F,171C,178T,180D,203R
KM048894	ZM319M	Zambia	30-Aug-2006		genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,91N,92P,120S,128D,148V,169F,171C,178T,180D,184*W,203R,225GS
KM048895	ZM319M	Zambia	09-Dec-2006		genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,91N,92P,120S,128D,148V,169F,171C,178T,180D,203R
KM048896	ZM319M	Zambia	29-May-2007		genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,91N,92P,120S,128D,148V,169F,171C,178T,180D,203R
KM048897	ZM319M	Zambia	10-Nov-2007		genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,91N,92P,120S,128D,148V,169F,171C,178T,180D,203R
KM048899	ZM322F	Zambia	04-Jan-2006		genomic RNA	plasma		1	231	6L,13N,14P,15L,27I,29D,41T,71D,83L,110N,116A,120S,128D,148V,154K,169F,178T,187D,203R,208G,210N,225S
KM048900	ZM322F	Zambia	29-Mar-2006		genomic RNA	plasma		1	231	6L,13N,14P,15L,27I,29D,41T,71D,83L,110N,116A,120S,128D,148V,154K,169F,178T,187D,203R,208G,210N,225S
KM048901	ZM322F	Zambia	21-Jun-2006		genomic RNA	plasma		1	231	6L,13N,14P,15L,27I,29D,36IV,41T,71D,83L,110N,116A,120S,128D,148V,154K,169F,178T,187D,203R,208G,210N,225S
KM048902	ZM322F	Zambia	13-Sep-2006		genomic RNA	plasma		1	231	6L,13N,14P,15L,27I,29D,36IV,41T,71D,83L,96IM,107AT,110N,116AT,120S,128D,148V,154K,169F,178T,187D,203R,208G,210N,225S
KM048903	ZM322F	Zambia	28-Feb-2007		genomic RNA	plasma		1	231	6L,13N,14P,15L,27I,29D,41T,71D,83L,96I,110N,116T,120S,128D,148V,154K,169F,178T,187D,203R,208G,210N,225S
KM048904	ZM322F	Zambia	15-Aug-2007		genomic RNA	plasma		1	231	6L,13N,14P,15L,27I,29D,41T,71D,83L,96I,110N,116T,120GS,128D,148V,154K,169F,178T,187D,203R,208G,210N,225S
KM048905	ZM322F	Zambia	09-Feb-2008		genomic RNA	plasma		1	231	6L,13NS,14P,15L,27I,29D,41T,71D,83L,87HQ,96I,110N,116T,120G,128D,148V,154K,169F,178T,187D,203R,208G,210N,225S
KM048898	ZM322M	Zambia	04-Jan-2006		genomic RNA	plasma		1	231	6L,13N,14P,15L,27I,29D,36IV,41T,71D,83L,91V,110N,116A,120GS,128D,148V,154K,160PS,169F,178T,187D,203R,208G,210S,225S
KM048906	ZM323F	Zambia	11-Jan-2006		genomic RNA	plasma		1	231	6L,27I,41T,71D,75D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178ST,187D,203R,208G,225S
KM048907	ZM323M	Zambia	11-Jan-2006		genomic RNA	plasma		1	231	6L,27I,41T,71D,75D,83L,91V,116A,120S,128D,148V,154K,169F,177S,187D,203R,208G,225S
KM048908	ZM323M	Zambia	13-Jul-2006		genomic RNA	plasma		1	231	6L,11IV,27I,41T,71D,75D,83L,91V,116A,120S,128D,148V,154K,169F,177S,187D,203R,208G,225S
KM048909	ZM323M	Zambia	14-Sep-2006		genomic RNA	plasma		1	231	6L,11IV,27I,41T,71D,75D,83L,91V,116A,120S,128D,148V,154K,169F,177S,187D,203R,208G,225S
KM048910	ZM323M	Zambia	17-Mar-2007		genomic RNA	plasma		1	231	6V,11IV,14S,27I,41T,71D,75D,83L,91V,116A,120S,128D,148V,154K,169F,177S,187D,203R,208G,225S
KM048911	ZM323M	Zambia	15-Feb-2008		genomic RNA	plasma		1	231	6L,11IV,14S,27I,41T,71D,75D,83L,91V,116A,120S,128D,148V,154K,169F,177S,187D,203R,208G,225S
KM048912	ZM324M	Zambia	28-Jul-2005		genomic RNA	plasma		1	231	6L,14P,27I,31G,33N,41T,61D,83L,91V,94N,116A,120S,128D,135V,148V,154K,170R,171V,178T,180D,200S,203R,225S
KM048913	ZM326F	Zambia	17-Feb-2007		genomic RNA	plasma		1	231	6L,27IV,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,191IV,203R,208G
KM048914	ZM326M	Zambia	17-Feb-2007		genomic RNA	plasma		1	231	6L,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,191I,203R,208G
KM048915	ZM326M	Zambia	21-Jun-2007		genomic RNA	plasma		1	231	6L,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,191I,203R,208G
KM048916	ZM326M	Zambia	13-Sep-2007		genomic RNA	plasma		1	231	6L,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,191I,203R,208G
KM048917	ZM326M	Zambia	28-Feb-2008		genomic RNA	plasma		1	231	6L,41T,71D,83L,91V,116A,120NS,128D,148V,154K,169F,177S,178T,187D,191I,203R,208G
KM048918	ZM326M	Zambia	19-Aug-2008		genomic RNA	plasma		1	231	6L,41T,71D,83L,91V,116A,128D,148V,154K,169F,177S,178T,187D,191I,203R,208G
KM048919	ZM326M	Zambia	21-Apr-2009		genomic RNA	plasma		1	231	6L,41T,71D,83L,91V,116A,120DGNS,128D,148V,154K,169F,177S,178T,187D,191I,203R,208G
KM048920	ZM331F	Zambia	28-Apr-2009		genomic RNA	plasma		1	231	6L,27IV,41T,71D,83M,113DE,116A,120GS,128D,148V,154K,169F,177S,178T,187D,203R,208G
KM049006	ZM331F	Zambia	12-Sep-2009		genomic RNA	plasma		1	231	6L,27I,41T,71D,83M,116T,120S,128D,148V,154K,169F,177S,178T,187D,203R,207S,208G
KM048921	ZM331M	Zambia	12-Sep-2009		genomic RNA	plasma		1	231	6L,27I,41T,71D,83M,116T,120S,128D,148V,154K,169F,177S,178T,187D,203R,207S,208G
KM048922	ZM3576F	Zambia	18-Apr-2009		genomic RNA	plasma		1	231	6L,15L,27I,41T,71D,75D,83L,91V,92V,116A,118I,120G,124V,148V,154K,169F,177G,178T,187D,203R,208G
KM048923	ZM358M	Zambia	30-Sep-2005		genomic RNA	plasma		1	231	6L,15L,27I,36I,41T,71D,83L,91V,98D,100K,116A,148V,154K,169F,178T,180D,187D,203R,208G
KM048924	ZM3618M	Zambia	18-Jun-2009		genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,116A,120S,128D,148V,154K,169F,178T,187D,203R,208G
KM048925	ZM363F	Zambia	05-Oct-2005		genomic RNA	plasma		1	231	6L,14P,27I,41T,71D,83L,86A,87Q,91V,110N,116A,120G,123A,128D,148V,154K,160S,169F,171V,177S,187D,203R,208G,225S
KM048926	ZM3658F	Zambia	11-Mar-2009		genomic RNA	plasma		1	231	6L,27I,41T,71D,86A,87Q,96I,116T,120G,124V,148V,154K,169F,178T,180D,187D,203KR,210S
KM048927	ZM3658M	Zambia	28-Apr-2009		genomic RNA	plasma		1	231	6L,27I,41T,71D,86A,87Q,96I,116T,120G,124V,148V,154K,169F,178T,180D,187D,210S
KM048928	ZM3678M	Zambia	17-Sep-2009		genomic RNA	plasma		1	231	15L,27I,41T,50R,71D,83L,87Q,91V,116A,120A,128D,148V,154K,169F,171I,178T,200S,203R,225S
KM048929	ZM3701F	Zambia	03-Jun-2009		genomic RNA	plasma		1	231	6L,14P,27I,31G,33N,41T,71D,83L,116A,120S,128D,129M,148V,154K,169F,178T,180D,187D,203R,208G,225GS
KM048930	ZM3701M	Zambia	03-Jun-2009		genomic RNA	plasma		1	231	6L,14P,27I,31G,33N,41T,71D,83L,116A,120S,128D,129M,148V,154K,169F,178T,180D,187D,203R,208G
KM048931	ZM3733F	Zambia	25-Jul-2009		genomic RNA	plasma		1	231	6L,15L,27I,41T,71D,87Q,91V,96V,116A,120S,148V,154K,169F,178T,183G,187D,203R,208G,225S
KM048932	ZM3733M	Zambia	25-Jul-2009		genomic RNA	plasma		1	231	6L,15L,27I,41T,71D,83L,91IV,96V,116A,148V,154K,169F,178ST,180D,187D,203R,208G,225S
KM048933	ZM377F	Zambia	21-Sep-2005		genomic RNA	plasma		1	231	6L,14P,15L,41T,71D,83L,91V,110S,112A,116A,120G,124V,128D,148V,154K,169F,178T,180D,187D,200I,203R,204G,208G,225S
KM048934	ZM3802F	Zambia	31-Oct-2009		genomic RNA	plasma		1	231	6L,14AP,15IL,27I,41T,71D,83L,116A,120S,128D,148V,154K,169F,171IT,178ST,187DE,191I,200HNPT,203KR,208G,210S,225S
KM048935	ZM3802M	Zambia	31-Oct-2009		genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,116A,120S,128D,148V,154K,169F,171IT,178ST,187D,191I,200H,208G,210S,225S
KM048936	ZM3827F	Zambia	31-Jul-2009		genomic RNA	plasma		1	231	6L,15L,31N,41T,59I,71D,83T,107S,116T,120S,124V,148V,169F,171A,178T,180D,190LM,204G,208G,225S
KM048937	ZM3827M	Zambia	31-Jul-2009		genomic RNA	plasma		1	231	6L,15L,31N,41T,59I,71D,83T,107S,116T,120S,124V,148V,169F,171A,178T,180D,190M,204G,208G,225S
KM048939	ZM3841F	Zambia	19-Jun-2009		genomic RNA	plasma		1	231	6L,27I,41T,71D,83T,86A,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G
KM048938	ZM3841M	Zambia	19-Jun-2009		genomic RNA	plasma		1	231	6L,27I,41T,71D,83T,86AV,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G
KM048941	ZM3863F	Zambia	24-Sep-2009		genomic RNA	plasma		1	231	27I,41T,71D,91V,96L,116A,120A,124V,128D,148V,154K,169F,171V,178T,180D,203R,225S
KM048940	ZM3863M	Zambia	24-Sep-2009		genomic RNA	plasma		1	231	27I,41T,71D,91V,96L,116A,120A,124V,128D,148V,154K,169F,171V,178T,180D,203R,225S
KM048942	ZM39F	Zambia	27-Aug-1999		genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,110N,116A,120S,128D,148V,154K,169F,177S,178ST,187D,203R,208G,210S,225S
KM048944	ZM403F	Zambia	01-Nov-2006		genomic RNA	plasma		1	231	6L,27I,36I,41T,71D,83T,91H,92P,96L,116A,128D,135V,148V,154K,169F,170R,171C,178T,187D,208G,210N,225S
KM048945	ZM403F	Zambia	07-Mar-2007		genomic RNA	plasma		1	231	6L,27I,36I,41T,71D,83T,91H,92P,96L,116A,128D,135V,148V,154K,169F,170R,171C,178T,187D,208G,210N,225S
KM048946	ZM403F	Zambia	30-May-2007		genomic RNA	plasma		1	231	6L,27I,36I,41T,71D,83T,91H,92P,96L,116A,128D,135V,148V,154K,169F,170R,171C,178T,187D,208G,210N,225S
KM048947	ZM403F	Zambia	23-Aug-2007		genomic RNA	plasma		1	231	6L,27I,36I,41T,71D,83T,87HQ,91H,92P,96L,116A,128D,135V,148V,154K,169F,170R,171C,178T,187D,208G,210N,225S
KM048948	ZM403F	Zambia	15-Nov-2007		genomic RNA	plasma		1	231	6L,27I,36I,41T,71D,83T,87Q,91H,92P,96L,116A,128D,135V,148V,154K,169F,170KR,171C,178T,187D,208G,210N,225S
KM048949	ZM403F	Zambia	22-Jul-2008		genomic RNA	plasma		1	231	6L,14AP,27I,36I,41T,71D,83T,91H,92P,96L,116A,128D,135V,148V,154K,169F,171C,178T,187D,208G,210N,225S
KM048950	ZM403F	Zambia	07-Jan-2009		genomic RNA	plasma		1	231	6L,16AS,27I,36I,41T,71D,83IT,87HQ,91H,92P,96L,116A,128D,135V,148V,154K,169F,171C,178T,187D,208G,210N,225S
KM048943	ZM403M	Zambia	12-Dec-2006		genomic RNA	plasma		1	231	6L,14AP,27I,36I,41T,71D,83T,91H,92P,96L,115V,116A,128D,135V,148V,154K,169F,170R,171C,178T,187D,208G,210N,225GS
KM048951	ZM405M	Zambia	24-Mar-2006		genomic RNA	plasma		1	231	6A,13T,14P,16T,27I,31N,41T,71D,83L,86IV,91V,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,208G,210ST
KM048952	ZM406M	Zambia	17-Nov-2005		genomic RNA	plasma		1	231	6L,27I,41T,50S,71D,83L,87HQ,91V,116A,120S,124V,128D,148V,169F,178T,180DE,187D,208G
KM048953	ZM410F	Zambia	30-Sep-2005		genomic RNA	plasma		1	231	6L,27I,41T,71D,91A,116A,120G,124V,148V,154K,169F,171V,187D,204S,207T,208G,210S,225T
KM049004	ZM4248M	Zambia	04-Jun-2010		genomic RNA	plasma		1	231	6L,27I,41T,71D,91V,116A,120S,124V,148V,169F,180D,187D,203R,208G
KM048954	ZM434F	Zambia	31-Jan-2007		genomic RNA	plasma		1	231	6L,15L,27I,36I,41T,71D,74HY,83L,87HQ,91V,110N,116A,120NS,128D,148V,154K,169F,178T,183G,187D,203R,208G,210S,225S
KM048955	ZM434M	Zambia	31-Jan-2007		genomic RNA	plasma		1	231	6L,15L,27I,36I,41T,71D,83L,87Q,91V,110N,116A,128D,148V,154K,169F,178T,183G,187D,203R,208G,210S
KM048956	ZM434M	Zambia	14-Mar-2007		genomic RNA	plasma		1	231	6L,15L,27I,36I,41T,71D,83L,87Q,91V,110N,116A,128D,148V,154K,169F,178T,183G,187D,203R,208G,210S
KM048957	ZM434M	Zambia	27-Jun-2007		genomic RNA	plasma		1	231	6L,15L,27I,36I,41T,71D,83L,87Q,91V,110N,116A,128D,148V,154K,169F,178T,183G,187D,203R,208G,210S
KM048958	ZM436F	Zambia	01-Oct-2005		genomic RNA	plasma		1	231	6L,9H,14P,27I,41T,71D,79D,83L,91V,116A,120S,124V,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
KM048959	ZM438F	Zambia	05-Oct-2005		genomic RNA	plasma		1	231	2IV,6L,14P,15L,27I,31S,41T,75D,83L,91V,110N,116A,120G,128D,148V,169F,178T,180D,187D,203R,208G,225S
KM049005	ZM4473M	Zambia	07-Jun-2011		genomic RNA	plasma		1	231	6L,14P,41T,83L,91N,116A,120S,124V,148V,154K,169F,171V,178T,180D,187D,203R,208G,210S,211I,225S
KM048961	ZM448F	Zambia	01-Apr-2009		genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,87Q,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,210S,225S
KM048960	ZM448M	Zambia	01-Apr-2009		genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,87Q,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,210S,225S
KM048962	ZM449F	Zambia	28-Sep-2005		genomic RNA	plasma		1	231	6L,41T,71D,83M,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,210S
KM048963	ZM454M	Zambia	27-Oct-2005		genomic RNA	plasma		1	231	14T,15M,27I,41T,47C,50S,75D,83L,86A,87Q,96L,102T,116A,120A,121S,124V,128D,148V,154K,169F,178T,183T,187D,203R,208G
KM048964	ZM455F	Zambia	24-Sep-2005		genomic RNA	plasma		1	231	6L,41T,50S,54S,71D,83L,116A,120S,128D,148V,154K,169F,171IV,178T,187D,203R,208G,211I,225S
KM048965	ZM460F	Zambia	21-Mar-2006		genomic RNA	plasma		1	231	6L,27I,41T,50A,71D,83L,87Q,91N,92P,116A,120G,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
KM048966	ZM480F	Zambia	03-Mar-2007		genomic RNA	plasma		1	231	6L,15L,41T,50A,59IMV,71DE,77AV,83L,86A,87Q,91L,96I,102N,116T,120S,148V,154K,169F,178T,180D,187D,203R,208G
KM048967	ZM480M	Zambia	03-Mar-2007		genomic RNA	plasma		1	231	6L,15L,41T,50A,83L,86A,87Q,91L,96I,102N,116T,120S,148V,154K,169F,178T,180D,187D,203R,208G
KM048968	ZM480M	Zambia	19-May-2007		genomic RNA	plasma		1	231	6L,15L,41T,50A,83L,86A,87HQ,91L,96I,116T,120S,148V,154K,169F,178T,180D,187D,203R,208G
KM048969	ZM480M	Zambia	03-Aug-2007		genomic RNA	plasma		1	231	6L,15L,41T,50AV,83L,86A,87HQ,91L,96I,116T,120S,148V,154K,169F,178T,180D,187D,203R,208G
KM048970	ZM480M	Zambia	03-Nov-2007		genomic RNA	plasma		1	231	6L,15L,41T,50AGV,83L,86A,87HQ,91L,96I,116T,120S,148V,154K,169F,178T,180D,187D,203R,208G
KM048971	ZM480M	Zambia	23-Apr-2008		genomic RNA	plasma		1	231	6L,15L,41T,50AG,83L,86A,87HQ,91L,96I,116T,120S,148V,154K,169F,178T,180D,187D,203R,208G
KM048972	ZM480M	Zambia	02-Oct-2008		genomic RNA	plasma		1	231	6L,14AST,15L,41T,50G,83L,86A,87HQ,91L,96I,116T,120S,148V,154K,169F,178T,180D,187D,203R,208G
KM048973	ZM480M	Zambia	21-Mar-2009		genomic RNA	plasma		1	231	6L,14AT,15L,41T,50G,83L,86A,87HQ,91L,96I,116T,120S,148V,154K,169F,178T,180D,187D,203R,208G
KM048974	ZM502F	Zambia	23-Nov-2005		genomic RNA	plasma		1	231	6L,27I,36I,41T,71D,83L,86A,87Q,91V,96I,116A,120NS,124V,128D,148V,154K,169F,178T,179QR,183G,187D,193T,203R,208G,210S
KM048975	ZM507F	Zambia	22-Sep-2005		genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,87Q,91V,96V,116A,120S,148V,169F,171C,178T,180D,191I,207S,208G,210S,225S
KM048976	ZM511F	Zambia	24-Sep-2005		genomic RNA	plasma		1	231	6L,15L,41T,71D,83L,116A,123~,124V,148V,154K,160PS,169F,178ST,180D,187D,203R,208G,210S,211I
KM048977	ZM515F	Zambia	23-Sep-2005		genomic RNA	plasma		1	231	6L,27I,41T,71D,96I,116T,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
KM048978	ZM523M	Zambia	15-Oct-2005		genomic RNA	plasma		1	231	6L,15L,27I,33NS,36I,41T,71D,83L,86A,87Q,91V,96I,110N,116T,120S,128D,148V,154K,169F,178T,183G,187D,203R,208G,210S
KM048980	ZM531F	Zambia	05-Jul-2006		genomic RNA	plasma		1	231	6L,15L,27I,36I,41T,52M,71D,83T,91V,120S,128D,148V,154K,169F,178T,187D,207PS,208G,225S
KM048981	ZM531F	Zambia	25-Apr-2007		genomic RNA	plasma		1	231	6L,15L,27I,36I,41T,44AS,52M,71D,83T,91V,120S,128D,148V,154K,169F,178T,187D,207APS,208G,225S
KM048982	ZM531F	Zambia	18-Jul-2007		genomic RNA	plasma		1	231	6L,15L,27I,36I,41T,44AS,52M,71D,83T,91V,116GS,120S,128D,148V,154K,169F,178T,187D,207PQ,208G,225S
KM048983	ZM531F	Zambia	15-Jul-2008		genomic RNA	plasma		1	231	6L,15L,27I,36I,46GV,48ST,52M,71D,83T,91V,116S,120S,128D,148V,154K,169F,171A,178T,180D,187D,207S,208G,225S
KM048979	ZM531M	Zambia	05-Jul-2006		genomic RNA	plasma		1	231	6L,15L,27I,36I,41T,71D,83T,91V,128D,148V,154K,169F,178T,187D,203R,208G,225S
JN014342	ZM53F	Zambia	12-Feb-2000	10	genomic RNA	plasma		1	231	6L,15L,27I,41T,56F,71D,83L,96L,116A,120A,124V,148V,154K,169F,178T,180D,207T,208G,210S,225S
JN014343	ZM53F	Zambia	12-Feb-2000	11	genomic RNA	plasma		1	231	6L,15L,27I,41T,56F,71D,83L,96L,116A,120A,124V,148V,154K,169F,178T,180D,207T,208G,210S,225S
JN014344	ZM53F	Zambia	12-Feb-2000	12	genomic RNA	plasma		1	231	6L,15L,27I,41T,56F,71D,83L,96L,116A,120A,124V,148V,154K,169F,178T,180D,207T,208G,210S,225S
JN014345	ZM53F	Zambia	12-Feb-2000	13	genomic RNA	plasma		1	231	6L,15L,27I,41T,56F,71D,83L,96L,116A,120A,124V,148V,154K,169F,178T,180D,207T,208G,210S,225S
JN014346	ZM53F	Zambia	12-Feb-2000	14	genomic RNA	plasma		1	231	6L,15L,27I,41T,56F,71D,83L,96L,116A,120A,124V,148V,154K,169F,178T,180D,207T,208G,210S,225S
JN014347	ZM53F	Zambia	12-Feb-2000	15	genomic RNA	plasma		1	231	6L,15L,27I,41T,56F,71D,83L,96L,116A,120A,124V,148V,154K,169F,178T,180D,207T,208G,210S,225S
JN014348	ZM53F	Zambia	12-Feb-2000	16	genomic RNA	plasma		1	231	6L,15L,27I,41T,56F,71D,83L,116A,120A,124V,148V,154K,169F,178T,180D,207T,208G,210S,225S
JN014349	ZM53F	Zambia	12-Feb-2000	2	genomic RNA	plasma		1	231	6L,15L,27I,41T,56F,71D,83L,96L,116A,120A,124V,148V,154K,169F,178T,180D,207T,208G,210S,225S
JN014350	ZM53F	Zambia	12-Feb-2000	3	genomic RNA	plasma		1	231	6L,15L,27I,41T,56F,71D,75K,78T,83L,116A,120A,124V,148V,154K,169F,178T,180D,207T,208G,210S,225S
JN014351	ZM53F	Zambia	12-Feb-2000	6	genomic RNA	plasma		1	231	6L,15L,27I,41T,56F,71D,83L,96L,116A,120A,124V,148V,154K,169F,178T,180D,207T,208G,210S,225S
JN014352	ZM53F	Zambia	12-Feb-2000	7	genomic RNA	plasma		1	231	6L,15L,27I,41T,56F,71D,83L,96L,116A,120A,124V,148V,154K,169F,178T,180D,207T,208G,210S,225S
JN014353	ZM53F	Zambia	12-Feb-2000	8	genomic RNA	plasma		1	231	6L,15L,27I,41T,56F,71D,83L,96L,116A,120A,124V,148V,154K,169F,178T,180D,207T,208G,210S,225S
JN014354	ZM53F	Zambia	12-Feb-2000	9	genomic RNA	plasma		1	231	6L,15L,27I,41T,56F,71D,83L,96L,116A,120A,124V,148V,154K,169F,178T,180D,207T,208G,210S,225S
JN014355	ZM53M	Zambia	12-Feb-2000	1	genomic RNA	plasma		1	231	6L,14S,15L,27I,41T,56F,71D,83L,96L,116A,120A,124V,148V,154K,169F,178T,180D,207T,208G,210S,225S
JN014356	ZM53M	Zambia	12-Feb-2000	10	genomic RNA	plasma		1	231	6L,14P,15L,27I,41T,56F,71D,83L,96L,116A,120A,124V,148V,154K,169F,178T,180D,207T,208G,210S,225S
JN014357	ZM53M	Zambia	12-Feb-2000	11	genomic RNA	plasma		1	231	6L,14P,15L,27I,41T,56F,71D,83L,96L,116A,120A,124V,148V,154K,169F,178T,180D,207T,208G,210S,225S
JN014358	ZM53M	Zambia	12-Feb-2000	12	genomic RNA	plasma		1	231	6L,14P,15L,27I,41T,56F,71D,83L,96L,116A,120A,124V,148V,154K,169F,178T,180D,207T,208G,210S,225S
JN014359	ZM53M	Zambia	12-Feb-2000	13	genomic RNA	plasma		1	231	6L,14P,15L,27I,41T,56F,71D,83L,96L,116A,120A,124V,148V,154K,169F,178T,180D,207T,208G,210S,225S
JN014360	ZM53M	Zambia	12-Feb-2000	14	genomic RNA	plasma		1	231	6L,14P,15L,27I,41T,56F,71D,83L,96L,116A,120A,124V,148V,154K,169F,178T,180D,207T,208G,210S,225S
JN014361	ZM53M	Zambia	12-Feb-2000	2	genomic RNA	plasma		1	231	6L,14P,15L,27I,41T,56F,71D,83L,96L,116A,120A,124V,148V,154K,169F,178T,180D,207T,208G,210S,225S
JN014362	ZM53M	Zambia	12-Feb-2000	3	genomic RNA	plasma		1	231	6L,14P,15L,27I,41T,56F,71D,83L,96L,116A,120A,124V,148V,154K,169F,178T,180D,207T,208G,210S,225S
JN014363	ZM53M	Zambia	12-Feb-2000	4	genomic RNA	plasma		1	231	6L,14P,15L,27I,41T,56F,71D,83L,96L,116A,120A,124V,148V,154K,169F,178T,180D,207T,208G,210S,225S
JN014364	ZM53M	Zambia	12-Feb-2000	5	genomic RNA	plasma		1	231	6L,14P,15L,27I,41T,56F,71D,83L,96L,116A,120A,124V,148V,154K,169F,178T,180D,207T,208G,210S,225S
JN014365	ZM53M	Zambia	12-Feb-2000	6	genomic RNA	plasma		1	231	6L,14P,15L,27I,41T,56F,71D,83L,96L,116A,120A,124V,148V,154K,169F,178T,180D,207T,208G,210S,225S
JN014366	ZM53M	Zambia	12-Feb-2000	7	genomic RNA	plasma		1	231	6L,14P,15L,27I,41T,56F,71D,83L,96L,116A,120A,124V,148V,154K,169F,178T,180D,207T,208G,210S,225S
JN014367	ZM53M	Zambia	12-Feb-2000	8	genomic RNA	plasma		1	231	6L,14P,15L,27I,41T,56F,71D,83L,96L,116A,120A,124V,148V,154K,169F,178T,180D,207T,208G,210S,225S
JN014368	ZM53M	Zambia	12-Feb-2000	9	genomic RNA	plasma		1	231	6L,14P,15L,27I,41T,56F,71D,83L,96L,116A,120A,124V,148V,154K,169F,178T,180D,207T,208G,210S,225S
KM048984	ZM547F	Zambia	26-Nov-2005		genomic RNA	plasma		1	231	2L,3MV,4R,5DGNS,6L,12Y,14N,15IL,16ST,27I,41T,50H,71D,83AT,91V,111H,112E,116AT,120S,124V,131KR,148V,151LW,154K,169F,178T,180D,187D,203R,208G,210S
JN014369	ZM55F	Zambia	12-Aug-1998	1	genomic RNA	plasma		1	231	6L,27I,41T,71D,83M,116A,120S,128D,148V,154K,169F,177S,178T,187D,207S,208G
JN014370	ZM55F	Zambia	12-Aug-1998	10	genomic RNA	plasma		1	231	6L,27I,41T,71D,83M,116A,120S,128D,148V,154K,169F,177S,178T,187D,207S,208G
JN014371	ZM55F	Zambia	12-Aug-1998	11	genomic RNA	plasma		1	231	6L,27I,41T,71D,83M,116A,120S,128D,148V,154K,169F,177S,178T,187D,207S,208G
JN014372	ZM55F	Zambia	12-Aug-1998	12	genomic RNA	plasma		1	231	6L,27I,41T,58I,71D,83M,116A,120S,128D,148V,154K,169F,177S,178T,187D,207S,208G
JN014373	ZM55F	Zambia	12-Aug-1998	13	genomic RNA	plasma		1	231	6L,27I,41T,71D,83M,116A,120S,128D,148V,154K,169F,177S,178T,187D,207S,208G
JN014374	ZM55F	Zambia	12-Aug-1998	14	genomic RNA	plasma		1	231	6L,27I,41T,71D,83M,116A,120S,128D,148V,154K,169F,177S,178T,187D,207S,208G
JN014375	ZM55F	Zambia	12-Aug-1998	15	genomic RNA	plasma		1	231	6L,27I,41T,71D,83M,116A,120S,128D,148V,154K,169F,177S,178T,187D,207S,208G
JN014376	ZM55F	Zambia	12-Aug-1998	16	genomic RNA	plasma		1	231	6L,27I,41T,71D,83M,116A,120S,128D,148V,154K,169F,177S,178T,187D,207S,208G
JN014377	ZM55F	Zambia	12-Aug-1998	17	genomic RNA	plasma		1	231	6L,27I,41T,71D,83M,116A,120S,128D,148V,154K,169F,177S,178T,187D,207S,208G
JN014378	ZM55F	Zambia	12-Aug-1998	18	genomic RNA	plasma		1	231	6L,27I,41T,71D,83M,116A,120S,128D,148V,154K,169F,177S,178T,187D,207S,208G
JN014379	ZM55F	Zambia	12-Aug-1998	2	genomic RNA	plasma		1	231	6L,27I,41T,71D,83M,116A,120S,128D,148V,154K,169F,177S,178T,187D,207S,208G
JN014380	ZM55F	Zambia	12-Aug-1998	20	genomic RNA	plasma		1	231	6L,27I,41T,71D,83M,116A,120S,128D,148V,154K,169F,177S,178T,187D,207S,208G
JN014381	ZM55F	Zambia	12-Aug-1998	21	genomic RNA	plasma		1	231	6L,27I,41T,71D,83M,116A,120S,128D,148V,154K,169F,177S,178T,187D,207S,208G
JN014382	ZM55F	Zambia	12-Aug-1998	22	genomic RNA	plasma		1	231	6L,27I,41T,71D,83M,116A,120S,128D,148V,154K,169F,177S,178T,187D,207S,208G
JN014383	ZM55F	Zambia	12-Aug-1998	3	genomic RNA	plasma		1	231	6L,27I,41T,71D,83M,116A,120S,128D,148V,154K,169F,177S,178T,187D,207S,208G
JN014384	ZM55F	Zambia	12-Aug-1998	4	genomic RNA	plasma		1	231	6L,27I,41T,71D,83M,116A,120S,128D,148V,154K,169F,177S,178T,187D,207S,208G
JN014385	ZM55F	Zambia	12-Aug-1998	5	genomic RNA	plasma		1	231	6L,27I,41T,71D,83M,116A,120S,128D,148V,154K,169F,177S,178T,187D,207S,208G
JN014386	ZM55F	Zambia	12-Aug-1998	6	genomic RNA	plasma		1	231	6L,27I,41T,71D,83M,116A,120S,128D,148V,154K,169F,177S,178T,187D,207S,208G
JN014387	ZM55F	Zambia	12-Aug-1998	7	genomic RNA	plasma		1	231	6L,27I,41T,71D,83M,116A,120S,128D,148V,154K,169F,177S,178T,187D,207S,208G
JN014388	ZM55F	Zambia	12-Aug-1998	9	genomic RNA	plasma		1	231	6L,27I,41T,71D,83M,116A,120S,128D,148V,154K,169F,177S,178T,187D,207S,208G
JN014389	ZM55M	Zambia	12-Aug-1998	10	genomic RNA	plasma		1	231	6L,27I,41T,71D,83M,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,207S,208G
JN014390	ZM55M	Zambia	12-Aug-1998	2	genomic RNA	plasma		1	231	6L,27I,41T,71D,83M,116A,120S,128D,148V,154K,169F,177S,178T,187D,207S,208G
JN014391	ZM55M	Zambia	12-Aug-1998	3	genomic RNA	plasma		1	231	6L,27I,41T,71D,83M,116A,120S,128D,148V,154K,169F,177S,178T,187D,207S,208G
JN014392	ZM55M	Zambia	12-Aug-1998	4	genomic RNA	plasma		1	231	6L,27I,41T,71D,83M,116A,120S,128D,148V,154K,169F,177S,178T,187D,207S,208G
JN014393	ZM55M	Zambia	12-Aug-1998	5	genomic RNA	plasma		1	231	6L,27I,41T,71D,83M,116A,120S,128D,148V,154K,169F,177S,178T,187D,207S,208G
JN014394	ZM55M	Zambia	12-Aug-1998	6	genomic RNA	plasma		1	231	6L,27I,41T,71D,83M,116A,120S,128D,148V,154K,169F,177S,178T,187D,207S,208G
JN014395	ZM55M	Zambia	12-Aug-1998	7	genomic RNA	plasma		1	231	6L,27I,41T,71D,83M,116A,120S,128D,148V,154K,169F,177S,178T,187D,207S,208G
KM048985	ZM560F	Zambia	23-Sep-2005		genomic RNA	plasma		1	231	6A,15V,31G,33N,41T,54M,58I,71D,83M,91V,96I,110N,116A,120G,124V,128D,135V,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G,210S
KM048986	ZM566M	Zambia	04-Nov-2005		genomic RNA	plasma		1	231	6A,27I,41T,71D,83L,116A,128D,148V,154K,169F,178T,180D,187D,203R,208G
KM048987	ZM570F	Zambia	26-Nov-2005		genomic RNA	plasma		1	231	2V,6L,15L,27I,41T,50G,59I,71D,83L,116A,120S,128D,148V,154K,160T,169F,178T,187D,208G,210S
KM048988	ZM629M	Zambia	28-Jul-2005		genomic RNA	plasma		1	231	6L,10H,28K,31G,41T,46E,83L,116A,128N,136M,148V,154K,169F,170R,178T,180D,187D,208G,214I,225S
KM048989	ZM634F	Zambia	24-Jul-2007		genomic RNA	plasma		1	231	6L,14P,15L,27I,41T,71D,83L,87P,91V,98D,110N,116A,120S,128D,148V,169F,178T,180D,187D,203R,208G,210S
KM048990	ZM634F	Zambia	05-Oct-2007		genomic RNA	plasma		1	231	6L,14P,15L,27I,41T,71D,83L,87P,91V,98D,110N,116A,120S,128D,148V,169F,178T,180D,187D,203R,208G,210S
KM048991	ZM634F	Zambia	08-Jan-2008		genomic RNA	plasma		1	231	6L,14P,15L,27I,41T,71D,83L,87P,91V,98D,110N,116A,120S,128D,148V,169F,178T,180D,187D,203R,208G,210S
KM048992	ZM634F	Zambia	02-Apr-2008		genomic RNA	plasma		1	231	6L,14P,15L,27I,41T,71D,83L,87P,91V,98D,110N,116A,120S,128D,148V,169F,178T,180D,187D,203R,208G,210S
KM048993	ZM634F	Zambia	11-Jun-2008		genomic RNA	plasma		1	231	6L,14P,15L,27I,41T,71D,83L,87HP,91V,98D,110N,116A,120S,128D,148V,169F,178T,180D,187D,203R,208G,210S
KM048994	ZM634F	Zambia	09-Dec-2008		genomic RNA	plasma		1	231	6L,14P,15L,27I,41T,71D,83L,87HP,91V,96IM,98D,116A,120S,128D,148V,169F,178T,180D,187D,203R,208G,210S
KM048995	ZM634F	Zambia	13-May-2009		genomic RNA	plasma		1	231	6L,14P,15L,27I,41T,71D,83L,91V,96I,98D,116A,120S,128D,148V,169F,178T,180D,187D,203R,208G,210S
KM048996	ZM645M	Zambia	17-Sep-2005		genomic RNA	plasma		1	231	6L,14S,27I,36I,41T,71D,83L,116A,124V,128D,148V,154K,169F,178T,187D,203R,204G,208G
KM048997	ZM675F	Zambia	10-Aug-2005		genomic RNA	plasma		1	231	6H,33N,36I,41T,71D,83L,91V,116A,120S,123A,128D,148V,154K,169F,178T,180D,187D,200N,203R,208G,210S,225S
KM048998	ZM714M	Zambia	27-Jul-2005		genomic RNA	plasma		1	231	6A,41T,54M,71D,83L,87Q,91IV,96I,116A,128D,148V,154K,169F,178T,180D,187D,203R,208G,210ST,225S
JN014437	ZM71F	Zambia	05-Sep-1998	1	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,116A,120S,128D,148V,154K,160S,169F,170R,178T,187D,191I,203R,208G,210S,225S
JN014438	ZM71F	Zambia	05-Sep-1998	11	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,116A,120S,128D,148V,154K,160S,169F,170R,178T,187D,191I,203R,208G,210S,225S
JN014439	ZM71F	Zambia	05-Sep-1998	12	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,116A,120S,128D,148V,154K,169F,178T,187D,191I,203R,208G,210S,225S
JN014440	ZM71F	Zambia	05-Sep-1998	13	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,116A,120S,128D,148V,154K,160S,169F,170R,178T,187D,191I,203R,208G,210S,225S
JN014441	ZM71F	Zambia	05-Sep-1998	14	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,116A,120S,128D,148V,154K,169F,178T,181I,187D,191I,203R,208G,210S,225S
JN014442	ZM71F	Zambia	05-Sep-1998	16	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,116A,120S,128D,148V,154K,160S,169F,170R,178T,187D,191I,203R,208G,210S,225S
JN014443	ZM71F	Zambia	05-Sep-1998	17	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,116A,120S,128D,148V,154K,160S,169F,170R,178T,187D,191I,203R,208G,210S,225S
JN014444	ZM71F	Zambia	05-Sep-1998	18	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,116A,120S,128D,148V,154K,169F,178T,187D,191I,203R,208G,210S,225S
JN014445	ZM71F	Zambia	05-Sep-1998	19	genomic RNA	plasma		1	231	6L,14T,27I,41T,71D,83L,116A,120S,128D,148V,154K,169F,178T,187D,191I,203R,208G,210S,225S
JN014446	ZM71F	Zambia	05-Sep-1998	2	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,116A,120S,128D,148V,154K,160S,169F,170R,178T,187D,191I,203R,208G,210S,225S
JN014447	ZM71F	Zambia	05-Sep-1998	20	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,116A,120S,128D,148V,154K,169F,178T,187D,191I,203R,208G,210S,225S
JN014448	ZM71F	Zambia	05-Sep-1998	21	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,116A,120S,128D,148V,154K,160S,169F,170R,178T,187D,191I,203R,208G,210S,225S
JN014449	ZM71F	Zambia	05-Sep-1998	22	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,116A,120S,128D,148V,154K,160S,169F,170R,178T,187D,191I,200N,203R,208G,210S,225S
JN014450	ZM71F	Zambia	05-Sep-1998	3	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,116A,120S,128D,148V,154K,169F,178T,187D,191I,203R,208G,210S,225S
JN014451	ZM71F	Zambia	05-Sep-1998	5	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,116A,120S,128D,148V,154K,169F,178T,187D,191I,203R,208G,210S,225S
JN014452	ZM71F	Zambia	05-Sep-1998	6	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,116A,120S,128D,148V,154K,169F,178T,187D,191I,203R,208G,210S,225S
JN014453	ZM71F	Zambia	05-Sep-1998	7	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,116A,120S,128D,148V,154K,169F,178T,187D,191I,203R,208G,210S,225S
JN014454	ZM71F	Zambia	05-Sep-1998	8	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,116A,120S,128D,148V,154K,160S,169F,170R,178T,187D,191I,203R,208G,210S,225S
JN014455	ZM71F	Zambia	05-Sep-1998	9	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,116A,120S,128D,148V,154K,160S,169F,170R,178T,187D,191I,200N,203R,208G,210S,225S
JN014456	ZM71M	Zambia	05-Sep-1998	10	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,115V,116A,120S,128D,148V,154K,169F,170R,178T,187D,191I,203R,208G,210S,225S
JN014457	ZM71M	Zambia	05-Sep-1998	11	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,115V,116A,120S,128D,148V,154K,169F,170R,178T,187D,191I,203R,208G,210S,225S
JN014458	ZM71M	Zambia	05-Sep-1998	12	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,115V,116A,120S,128D,148V,154K,169F,170R,178T,187D,191I,203R,208G,210S,225S
JN014459	ZM71M	Zambia	05-Sep-1998	13	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,115V,116A,120S,128D,148V,154K,169F,170R,178T,187D,191I,203R,208G,210S,225S
JN014460	ZM71M	Zambia	05-Sep-1998	14	genomic RNA	plasma		1	231	6L,22V,27I,41T,71D,83L,115V,116A,120S,128D,148V,154K,169F,170R,178T,187D,191I,203R,208G,210S,225S
JN014461	ZM71M	Zambia	05-Sep-1998	15	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,115V,116A,120S,128D,148V,154K,169F,170R,178T,187D,191I,203R,208G,210S,225S
JN014462	ZM71M	Zambia	05-Sep-1998	16	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,115V,116A,120S,128D,148V,154K,169F,170R,178T,187D,191I,203R,208G,210S,225S
JN014463	ZM71M	Zambia	05-Sep-1998	17	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,115V,116A,120S,128D,148V,154K,169F,170R,178T,187D,191I,203R,208G,210S,225S
JN014464	ZM71M	Zambia	05-Sep-1998	7	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,115V,116A,120S,128D,148V,154K,169F,170R,178T,187D,191I,203R,208G,210S,225S
JN014465	ZM71M	Zambia	05-Sep-1998	9	genomic RNA	plasma		1	231	6L,27I,41T,71D,83L,115V,116A,120S,128D,148V,154K,169F,170R,178T,187D,191I,203R,208G,210S,225S
JN014076	ZM83F	Zambia	10-Aug-1998	10	genomic RNA	plasma		1	231	6L,27I,41T,48P,71D,116A,120S,124V,148V,169F,178T,180D,203R,210S
JN014077	ZM83F	Zambia	10-Aug-1998	11	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,124V,148V,167W,169F,178T,180D,203R,210S
JN014078	ZM83F	Zambia	10-Aug-1998	12	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,124V,148V,169F,178T,180D,203R,210S
JN014079	ZM83F	Zambia	10-Aug-1998	13	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,124V,148V,169F,178T,180D,203R,210S
JN014080	ZM83F	Zambia	10-Aug-1998	15	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,124V,148V,169F,178T,180D,203R,210S
JN014081	ZM83F	Zambia	10-Aug-1998	16	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,124V,148V,169F,178T,180D,203R,210S
JN014082	ZM83F	Zambia	10-Aug-1998	17	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,124V,148V,169F,178T,180D,203R,210S
JN014083	ZM83F	Zambia	10-Aug-1998	18	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,124V,148V,169F,178T,180D,203R,210S
JN014084	ZM83F	Zambia	10-Aug-1998	19	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,124V,148V,169F,178T,180D,203R,210S
JN014085	ZM83F	Zambia	10-Aug-1998	2	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,124V,148V,169F,178T,180D,203R,210S
JN014086	ZM83F	Zambia	10-Aug-1998	20	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,124V,148V,169F,178T,180D,203R,210S
JN014087	ZM83F	Zambia	10-Aug-1998	21	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,124V,148V,169F,178T,180D,203R,210S
JN014088	ZM83F	Zambia	10-Aug-1998	4	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,124V,148V,169F,178T,180D,203R,210S
JN014089	ZM83F	Zambia	10-Aug-1998	6	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,124V,148V,169F,178T,180D,203R,210S
JN014090	ZM83F	Zambia	10-Aug-1998	7	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,124V,148V,169F,178T,180D,203R,210S
JN014091	ZM83F	Zambia	10-Aug-1998	9	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,124V,148V,169F,178T,180D,203R,210S
JN014092	ZM83M	Zambia	10-Aug-1998	1	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,124V,148V,169F,178T,180D,203R,210S
JN014093	ZM83M	Zambia	10-Aug-1998	10	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,124V,148V,169F,178T,180D,203R,210S
JN014094	ZM83M	Zambia	10-Aug-1998	13	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,124V,148V,169F,178T,180D,203R,210S
JN014095	ZM83M	Zambia	10-Aug-1998	15	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,124V,148V,169F,178T,180D,203R,210S
JN014096	ZM83M	Zambia	10-Aug-1998	17	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,124V,148V,169F,178T,180D,203R,210S
JN014097	ZM83M	Zambia	10-Aug-1998	18	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,124V,148V,169F,178T,180D,203R,210S
JN014098	ZM83M	Zambia	10-Aug-1998	19	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,124V,148V,169F,178T,180D,203R,210S
JN014099	ZM83M	Zambia	10-Aug-1998	20	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,124V,148V,169F,178T,180D,203R,210S
JN014100	ZM83M	Zambia	10-Aug-1998	21	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,124V,148V,169F,178T,180D,203R,210S
JN014101	ZM83M	Zambia	10-Aug-1998	22	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,124V,148V,169F,178T,180D,203R,210S
JN014102	ZM83M	Zambia	10-Aug-1998	23	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,124V,148V,169F,178T,180D,203R,210S
JN014103	ZM83M	Zambia	10-Aug-1998	25	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,124V,148V,169F,178T,180D,203R,210S
JN014104	ZM83M	Zambia	10-Aug-1998	26	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,124V,148V,169F,178T,180D,203R,210S
JN014105	ZM83M	Zambia	10-Aug-1998	27	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,124V,148V,169F,178T,180D,203R,210S
JN014106	ZM83M	Zambia	10-Aug-1998	28	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,124V,148V,169F,178T,180D,203R,210S
JN014107	ZM83M	Zambia	10-Aug-1998	3	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,124V,148V,169F,178T,180D,203R,210S
JN014108	ZM83M	Zambia	10-Aug-1998	30	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,124V,148V,169F,178T,180D,203R,210S
JN014109	ZM83M	Zambia	10-Aug-1998	4	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,124V,148V,169F,178T,180D,203R,210S
JN014110	ZM83M	Zambia	10-Aug-1998	5	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,124V,148V,169F,178T,180D,203R,210S
JN014111	ZM83M	Zambia	10-Aug-1998	6	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,124V,148V,169F,178T,180D,203R,210S
JN014112	ZM83M	Zambia	10-Aug-1998	7	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,124V,148V,169F,178T,180D,203R,210S
JN014113	ZM83M	Zambia	10-Aug-1998	8	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,124V,148V,169F,178T,180D,203R,210S
JN014114	ZM83M	Zambia	10-Aug-1998	9	genomic RNA	plasma		1	231	6L,27I,41T,71D,116A,120S,124V,148V,169F,178T,180D,203R,210S
KM048999	ZM924F	Zambia	30-Aug-2005		genomic RNA	plasma		1	231	6L,27I,41T,71D,83ILM,87Q,91H,92P,93A,96L,98DE,116A,120H,124IV,148V,154K,169F,178T,180D,187D,191LV,208G
KM049000	ZM949F	Zambia	30-Jul-2005		genomic RNA	plasma		1	231	6L,11I,15L,27I,41T,50V,71D,91V,96I,116T,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
KM049001	ZM970F	Zambia	26-Aug-2005		genomic RNA	plasma		1	231	6A,14P,41T,71D,83M,116T,120S,148V,154K,169F,178T,180D,187D,203R,208G
KM049002	ZM972F	Zambia	06-Aug-2005		genomic RNA	plasma		1	231	6L,14P,15L,27I,41T,71D,83L,87Q,91V,98D,116A,120S,128D,148V,154K,169F,178T,183DGHR,203R,208G,210S,225S