<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Li (2014) Molecular Epidemiology of HIV-1 in Jilin Province, Northeastern China: Emergence of a New CRF07_BC Transmission Cluster and Intersubtype Recombinants PLoS ONE 9 (10), E110738 (2014) 3.75e-151 122 110 Naive PBMC Direct PCR Molecular epidemiology

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AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
KF818906JL.DG01China2011genomic DNAsubtype: CRF01_AE12036A,11A,14S,15L,31G,33N,54M,58I,92P,116A,120S,124V,128D,148V,149G,200S
KF818907JL.RF01China2010genomic DNAsubtype: CRF01_AE/B/C12016L,14P,71D,83L,116A,120S,124V,128D,154K,169F,178T,180D,187D
KF818908JL.RF02China2010genomic DNAsubtype: CRF01_AE12056A,15V,31G,33N,45D,54M,58I,79D,83T,87Q,92P,96I,116T,148V,178T,200S
KF818909JL.RF03China2010genomic DNAsubtype: CRF01_AE/CRF07_BC12096L,14P,44A,68I,71D,83L,116A,120S,124V,128D,129L,154K,169F,178T,180D,187D,203R,208G
KJ184176JL.RF03China2010genomic DNAsubtype: CRF01_AE/CRF07_BC12316L,14P,44A,68I,71D,83L,116A,120S,124V,128D,129L,154K,169F,178T,180D,187D,203R,208G,210S,211I,225S
KF818910JL.RF04China2010genomic DNAsubtype: CRF01_AE/C12076L,41T,71D,83L,116A,120S,128D,136M,169F,178T,180D,187D,203R
KF818911JL.RF05China2010genomic DNAsubtype: CRF01_AE/C12086L,68I,71D,72V,83L,96L,116A,120A,124V,128D,136M,154K,169F,178T,180D,187D,203R,208G
KJ184177JL.RF05China2010genomic DNAsubtype: CRF01_AE/B'/C12316L,68I,71D,72V,83L,96L,116A,120A,124V,128D,136M,154K,169F,178T,180D,187D,203R,208G,210S,211I,225S
KF818912JL.RF06China2010genomic DNAsubtype: CRF01_AE/C12086L,68I,71D,72A,83L,116A,120A,124V,128D,136M,154K,169F,178T,180D,187D,203R,208G
KF818913JL.RF07China2010genomic DNAsubtype: B12056L,15L,41T,83L,86A,87Q,91V,120S,154K,180D
KF818914JL.RF08China2011genomic DNAsubtype: CRF07_BC12076L,14P,44A,68I,71D,83L,116A,120S,124V,141V,154K,169F,178T,180D,187D,203R
KF818915JL.RF09China2011genomic DNAsubtype: CRF07_BC12036L,14P,44A,68I,71D,83L,86I,116A,120S,124V,128D,129L,154K,169F,178T,180D,187D,203R
KF818916JL.RF10China2011genomic DNAsubtype: A1/G12076A,15V,27I,54M,58I,71D,83L,86Q,87Q,91L,92P,96I,116A,120R,128D,148V,154K,169F,171C,178T,183G,203R,207Q
KF818917JL.RF11China2011genomic DNAsubtype: CRF07_BC12086L,14P,68I,71D,79D,83L,116A,120S,124V,128D,154K,169F,178T,180D,187D,203R,208G
KF818784JL100005China2010genomic DNAsubtype: CRF01_AE12062V,6A,14P,15V,31G,33N,54M,58I,71D,92P,120S,148V,149G,154K,178T,200S
KF818785JL100007China2010genomic DNAsubtype: CRF01_AE12046A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S
KF818786JL100014China2010genomic DNAsubtype: CRF01_AE12046A,14P,15L,31G,33N,54M,58I,92P,120S,148V,149G,178T,200S
KF818787JL100020China2010genomic DNAsubtype: CRF01_AE12046A,14S,15L,31G,33N,54M,58I,86A,87Q,92P,96L,120S,128D,148V,149G,200S
KF818789JL100022China2010genomic DNAsubtype: CRF01_AE12056A,14P,15V,31G,33N,54M,58I,71D,92P,120S,128D,148V,149G,154K,178T,200S,201X
KF818791JL100025China2010genomic DNAsubtype: CRF01_AE12016A,11A,14S,15L,31G,33N,54M,58I,92P,120S,128D,148V,200S
KF818792JL100027China2010genomic DNAsubtype: CRF01_AE12076A,14S,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207S
KF818793JL100032China2010genomic DNAsubtype: CRF01_AE12076A,14P,15V,31G,33N,54M,58I,83T,92P,96I,128D,148V,178T,200S,207T
KF818794JL100034China2010genomic DNAsubtype: CRF01_AE12016A,11T,14S,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S
KF818796JL100036China2010genomic DNAsubtype: B12006L,14P,27I,83L,91V,122Q,122Q_Q
KF818798JL100038China2010genomic DNAsubtype: CRF01_AE12066A,14P,15L,31G,33N,54M,58I,83L,92P,128D,148V,149G,154K,178T,200S
KF818799JL100039China2010genomic DNAsubtype: B12016L,14P,44A,83L,91V,148S,180D
KF818800JL100040China2010genomic DNAsubtype: B12046L,44A,83L,116A,120S,148V,180D
KF818801JL100041China2010genomic DNAsubtype: CRF01_AE12026A,14P,15V,31G,33N,54M,58I,79D,83T,92P,110N,116A,120S,128D,148V,178T
KF818802JL100042China2010genomic DNAsubtype: CRF01_AE12046A,14S,15L,31G,33N,54M,58I,92P,120S,128D,148V,149G,200S
KF818803JL100043China2010genomic DNAsubtype: CRF01_AE12066A,14S,15L,31G,33N,54M,58I,87Q,92P,110N,120G,123A,128D,148V,149G,200S,201X
KF818804JL100044China2010genomic DNAsubtype: CRF07_BC12076L,14P,44A,68I,71D,83L,116A,120S,124V,128D,129L,136M,154K,169F,178T,180D,187D,203R
KF818805JL100047China2010genomic DNAsubtype: CRF01_AE12046A,14P,15V,31G,33N,54M,58I,83T,87Q,92P,96I,116A,128D,148V,178T,200A,203R
KF818806JL100048China2010genomic DNAsubtype: CRF07_BC12086L,14P,68I,71D,83L,116A,120S,124V,128D,169F,178T,180D,187D,203R,208G
KF818807JL100049China2010genomic DNAsubtype: CRF01_AE12056A,14P,31G,33N,54M,58I,83I,92P,128D,148V,178T,200S
KF818808JL100050China2010genomic DNAsubtype: CRF01_AE12056A,14P,15V,31G,33N,54M,58I,79D,83T,87Q,92P,96I,116A,128D,148V,149G,154K,178T,200A,203R
KF818809JL100051China2010genomic DNAsubtype: CRF01_AE12076A,14P,15L,31G,33N,54M,58I,79D,83A,92P,120S,148V,149G,200S,207T
KF818810JL100052China2010genomic DNAsubtype: CRF01_AE12076A,14S,15L,31G,33N,54M,58I,92P,120S,128D,148V,180D,200S,207S
KF818811JL100053China2010genomic DNAsubtype: CRF01_AE12056A,14P,15L,31G,33N,54M,58I,83I,92P,120S,123S,128D,148V,178T,200S
KF818812JL100054China2010genomic DNAsubtype: CRF01_AE12076A,14S,31G,33N,54M,58I,87Q,92P,120G,123A,128D,200S,207T
KF818813JL100055China2010genomic DNAsubtype: CRF01_AE12096A,14P,15V,31G,33N,54M,58I,78G,79D,83T,87Q,92P,96I,116A,128D,148V,178T,200A,207T,208G
KF818814JL100056China2010genomic DNAsubtype: CRF01_AE12066A,14S,15L,31G,33N,54M,58I,92P,110N,120S,128D,148V,178T,200S
KF818815JL100057China2010genomic DNAsubtype: CRF01_AE12056A,14P,15V,31G,33N,54M,58I,79D,83T,87Q,92P,96I,98D,116A,128D,148V,178T,204S
KF818816JL100059China2010genomic DNAsubtype: CRF01_AE12076A,14P,15V,31G,33N,54M,58I,79D,83T,87Q,92P,96I,116A,128D,148V,178T,204S,207T
KF818817JL100063China2010genomic DNAsubtype: B12096L,14P,27I,41T,83L,91V,128D,148A,178T,204X,205I
KF818818JL100064China2010genomic DNAsubtype: CRF01_AE12056A,14S,15V,31G,33N,54M,87Q,120S,128D,148V,149G,200S,203R
KF818819JL100065China2010genomic DNAsubtype: CRF07_BC12056L,14P,44A,68I,71D,83L,116A,120S,124V,128D,129L,154K,169F,178T,180D,187D,203R
KF818820JL100067China2010genomic DNAsubtype: CRF02_AG12086A,11T,12Y,14S,15M,27I,54M,58I,71D,79D,83A,87Q,92P,120S,135V,169F,178T,190M,200A,203R,208G
KF818821JL100068China2010genomic DNAsubtype: CRF01_AE12076A,14P,15V,31G,33N,54M,58I,79D,83T,87Q,92P,96I,116A,128D,148V,178T,200S,203R,207T
KF818822JL100069China2010genomic DNAsubtype: CRF01_AE12066A,14S,15L,31G,33N,54M,58I,78V,83T,92P,120S,128D,148V,200S
KF818823JL100070China2010genomic DNAsubtype: CRF07_BC12056L,14P,44A,68I,71D,83L,110N,116A,120S,124V,141V,154K,169F,178T,180D,187D,203R
KF818824JL100071China2010genomic DNAsubtype: CRF07_BC12086L,14P,44A,68I,71D,83L,116A,120S,124V,128D,129L,154K,169F,171V,178T,180D,187D,203R,208G
KF818825JL100073China2010genomic DNAsubtype: CRF01_AE12076A,14S,15L,31G,33N,54M,58I,92P,120S,128D,148V,149G,200S,207T
KF818826JL100074China2010genomic DNAsubtype: B12046L,14P,44A,83L,91V,148S,180D
KF818827JL100078China2010genomic DNAsubtype: C12076L,14P,15L,41T,71D,83L,110S,116A,124V,169F,178T,180D,187D,203R
KF818828JL100079China2010genomic DNAsubtype: CRF01_AE12046A,14P,15L,31G,33N,54M,58I,83I,92P,128D,148I,178T,200S
KF818829JL100084China2010genomic DNAsubtype: CRF02_AG12056A,11T,14S,15M,27I,54M,58I,71D,83I,91A,92P,120S,135V,169F,178T,190M,191I,200A
KF818830JL100085China2010genomic DNAsubtype: B12096L,83L,180D,205X
KF818831JL100087China2010genomic DNAsubtype: CRF01_AE12076A,10W,14S,15V,54M,58I,83T,92P,120S,128D,178T,200S,207T
KF818832JL100088China2010genomic DNAsubtype: CRF02_AG12086A,11T,14S,15M,27I,54M,58I,71D,91A,92P,120S,135V,169F,178T,190M,200S,203R,208G
KF818833JL100090China2010genomic DNAsubtype: B12096L,14P,71D,79D,83L,87Q,154K,180D,204X,205I
KF818834JL100097China2010genomic DNAsubtype: CRF07_BC12086L,14S,15L,68I,71D,83L,116A,120S,124V,128D,154K,169F,178T,180D,187D,203R,208G
KF818835JL100098China2010genomic DNAsubtype: CRF01_AE12096A,14S,15L,31G,33N,47S,54M,58I,83L,92P,96L,120S,128D,148V,200S,207S,208G
KF818836JL100099China2010genomic DNAsubtype: B12096L,14P,41T,83L,87Q,91H,92P,180D,203R,204X,205I
KF818837JL100101China2010genomic DNAsubtype: B12092V,6L,14P,41T,83L,87Q,91V,96I,116A,120H,124V,180D,204X,205I
KF818838JL100102China2010genomic DNAsubtype: B12056L,14P,15M,17A,83L,91V,98D,116A,120S,148V,180D
KF818839JL110001China2011genomic DNAsubtype: CRF01_AE12076A,14P,15L,31G,33N,54M,58I,92P,120S,148V,178T,200S,207T
KF818840JL110004China2011genomic DNAsubtype: CRF01_AE12076A,14S,15L,27I,31G,33N,54M,58I,92P,120S,128D,129L,148V,178T,200S,207T
KF818841JL110005China2011genomic DNAsubtype: CRF01_AE12036A,14P,31G,54M,58I,79D,83A,92P,128D,148V,178T,200S
KF818843JL110007China2011genomic DNAsubtype: CRF01_AE12046A,14P,31G,33N,54M,58I,79D,83T,92P,96I,116A,128D,148V,178T,204S
KF818844JL110009China2011genomic DNAsubtype: CRF01_AE12076A,14S,15L,31G,33N,54M,58I,87Q,92P,107S,120S,128D,200S,207T
KF818845JL110010China2011genomic DNAsubtype: CRF01_AE12076A,14P,15V,31G,33N,54M,58I,92P,110N,120S,128D,148V,149G,178T,200S,207T
KF818847JL110013China2011genomic DNAsubtype: CRF01_AE12056A,14P,15V,31G,33N,54M,58I,79D,83T,92P,96I,116A,128D,148V,178T,204S
KF818848JL110014China2011genomic DNAsubtype: CRF01_AE12016A,14P,15L,31G,33N,54M,58I,83L,92P,128D,148V,149G,200S
KF818849JL110015China2011genomic DNAsubtype: CRF01_AE12076A,14P,31G,33N,54M,58I,79D,83A,92P,110N,128D,148V,178T,200S,207T
KF818850JL110016China2011genomic DNAsubtype: CRF01_AE12016A,14S,15L,31G,33N,54M,58I,83A,92P,120S,128D,129L,148V,200S
KF818851JL110021China2011genomic DNAsubtype: CRF01_AE12096A,14P,15V,31G,33N,54M,58I,79D,83T,87Q,92P,96I,116A,128D,148I,178T,200S,207T,208G
KF818852JL110023China2011genomic DNAsubtype: CRF01_AE12076A,14P,15L,31G,33N,54M,58I,83L,92P,128D,148V,149G,200S,207S
KF818853JL110024China2011genomic DNAsubtype: CRF01_AE12056A,14S,15L,31G,33N,54M,58I,92P,115V,120S,128D,148V,180D,199R,200S
KF818854JL110025China2011genomic DNAsubtype: CRF01_AE12016A,14S,15L,31G,33N,54M,58I,92P,120S,128D,148V,200S
KF818855JL110026China2011genomic DNAsubtype: CRF01_AE12076A,14S,15L,31G,33N,54M,58I,83T,86I,87Q,92P,96I,116A,128D,148V,178T,200S,207S
KF818856JL110028China2011genomic DNAsubtype: CRF01_AE12076A,14P,15L,31G,33N,54M,58I,71D,79D,86I,92P,110N,120S,148V,204G,207T
KF818858JL110030China2011genomic DNAsubtype: CRF01_AE12076A,14S,15L,31G,33N,54M,58I,87Q,92P,120S,123S,128D,148V,180D,200S,207T
KF818859JL110031China2011genomic DNAsubtype: CRF07_BC12056L,14P,68I,71D,79D,83L,116A,118I,120G,124V,154K,169F,178T,180D,187D,203R
KF818860JL110032China2011genomic DNAsubtype: CRF01_AE12076A,14P,15V,31G,33N,54M,58I,71D,78V,83L,92P,120S,128D,148V,149G,154K,178T,200S,207T
KF818861JL110033China2011genomic DNAsubtype: CRF01_AE12076A,14S,15L,31G,33N,54M,58I,92P,110N,120S,128D,148V,200S,207S
KF818862JL110034China2011genomic DNAsubtype: CRF01_AE12076A,14S,15L,31G,33N,54M,58I,92P,120S,128D,148V,149G,200S,207T
KF818863JL110035China2011genomic DNAsubtype: CRF01_AE12076A,14P,15V,31G,33N,54M,58I,79D,83T,87Q,92P,96I,116A,128D,178T,200S,207R
KF818864JL110036China2011genomic DNAsubtype: CRF01_AE12076A,15V,31G,33N,54M,58I,79D,83T,87Q,92P,96I,110N,116A,128D,148V,178T,200S,207T
KF818865JL110037China2011genomic DNAsubtype: CRF01_AE12076A,14P,15V,31G,33N,54M,58I,75D,83T,92P,96I,128D,148V,149G,178T,204S,207T
KF818866JL110038China2011genomic DNAsubtype: CRF01_AE12016A,14P,15L,27I,31G,33N,54M,58I,71D,79D,92P,120S,148V,200A
KF818867JL110039China2011genomic DNAsubtype: CRF01_AE12036A,14S,15L,31G,33N,54M,58I,79D,83T,92P,96I,116A,128D,148V,149G,178T,200S
KF818869JL110041China2011genomic DNAsubtype: CRF01_AE12076A,14P,15V,31G,33N,54M,58I,79D,83T,87Q,92P,96I,110N,116A,128D,148V,178T,200A,207T
KF818870JL110044China2011genomic DNAsubtype: B12056L,14S,15L,27I,41T,68I,72A,83L,91V,116A,120A,124V,148S,154K,180D
KF818871JL110046China2011genomic DNAsubtype: CRF01_AE12056A,14P,15V,31G,33N,54M,58I,79D,83T,87Q,92P,96I,116A,128D,148V,178T,200S
KF818872JL110047China2011genomic DNAsubtype: CRF01_AE12066A,14S,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S
KF818873JL110048China2011genomic DNAsubtype: CRF07_BC12076L,14P,44A,68I,71D,83L,116A,120S,124V,128D,129L,154K,169F,178T,180D,187D,203R
KF818874JL110051China2011genomic DNAsubtype: CRF01_AE12076A,14S,15L,31G,33N,54M,58I,68I,92P,120S,128D,148V,149G,200S,207S
KF818875JL110052China2011genomic DNAsubtype: CRF07_BC12076L,14P,44A,68I,71D,83L,116A,120S,124V,128D,129L,154K,169F,178T,180D,187D,203R
KF818876JL110054China2011genomic DNAsubtype: CRF07_BC12096L,14P,44A,68I,71D,83L,116A,120G,124V,128D,154K,169F,178T,180D,187D,203R,208G
KF818877JL110055China2011genomic DNAsubtype: CRF01_AE12053M,6A,10N,14S,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S
KF818878JL110056China2011genomic DNAsubtype: CRF01_AE12066A,14P,15L,27I,31G,33N,54M,58I,92P,146R,148V,154K,178T,191I,200A
KF818879JL110057China2011genomic DNAsubtype: B12056L,14P,15M,83L,91V,110N,116A,180D
KF818880JL110060China2011genomic DNAsubtype: B12046L,14P,41T,83L,91V,120S,154K,180D
KF818881JL110061China2011genomic DNAsubtype: CRF01_AE12076A,14S,15L,31G,33N,54M,58I,87Q,92P,120S,123S,128D,148V,149G,200S,207T
KF818882JL110062China2011genomic DNAsubtype: CRF01_AE12096A,14P,15V,31G,33N,54M,58I,79D,83T,87Q,92P,96L,116A,128D,178T,200S,207R,208G
KF818883JL110064China2011genomic DNAsubtype: CRF07_BC12086L,14P,44A,68I,71D,83L,110S,116A,120S,124V,128D,154K,169F,178T,180D,187D,203R,208G
KF818884JL110065China2011genomic DNAsubtype: CRF01_AE12076A,14S,15L,31G,33N,54M,58I,78V,83L,92P,120S,128D,148V,154K,178T,200S,207T
KF818885JL110066China2011genomic DNAsubtype: CRF01_AE12076A,14S,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T
KF818886JL110067China2011genomic DNAsubtype: B12046L,14P,27I,52I,83L,91V,132K,136M,148V,154K,180D
KF818887JL110069China2011genomic DNAsubtype: CRF07_BC12076L,68I,71D,83L,116A,120S,124V,128D,148S,154K,169F,178T,180D,187D,203R
KF818889JL110071China2011genomic DNAsubtype: CRF01_AE12056A,14P,15V,31G,33N,54M,58I,79D,83T,87Q,92P,96I,116A,128D,148V,149G,178T,200S
KF818892JL110074China2011genomic DNAsubtype: B12016L,14P,44A,83L,87P,110N,180D
KF818893JL110075China2011genomic DNAsubtype: CRF07_BC12096L,11I,14P,41T,68I,71D,116T,120S,121T,124V,128D,154K,169F,178T,180D,187D,203R,208G
KF818894JL110076China2011genomic DNAsubtype: B12046L,27I,75D,83L,86A,87Q,91V,98D,120S,148V,180D
KF818896JL110085China2011genomic DNAsubtype: CRF07_BC12076L,14P,44A,68I,71D,83L,86I,110N,116A,120S,124V,128D,136M,154K,169F,178T,180D,187D,203R
KF818898JL110087China2011genomic DNAsubtype: CRF07_BC12076L,14P,68I,71D,79D,83L,116A,120S,124V,128D,154K,169F,178T,180D,187D,203R
KF818899JL110088China2011genomic DNAsubtype: B12036L,14P,27I,41T,83T,87Q,91V,96I,98D,110N,116A,120H,148V,180D,199R
KF818900JL110089China2011genomic DNAsubtype: CRF07_BC12056L,14P,68I,71D,79D,83L,116A,118I,120G,124V,154K,169F,178T,180D,187D,203R
KF818901JL110090China2011genomic DNAsubtype: CRF01_AE12076A,15L,31G,33N,54M,58I,87Q,92P,96L,120S,148V,178T,200S,207T
KF818902JL110092China2011genomic DNAsubtype: CRF07_BC12086L,14P,71D,83L,116A,120S,124V,128D,154K,169F,178T,180D,187D,203R,208G
KF818903JL110093China2011genomic DNAsubtype: CRF01_AE12046A,14S,15L,31G,33N,47S,54M,58I,87Q,92P,120S,148V,149G,200S,204G
KF818904JL110094China2011genomic DNAsubtype: B12096L,14P,83L,120S,123S,180D

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