<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Kousiappa (2016) Near Full-Length Genetic Analysis of HIV Sequences Derived from Cyprus: Evidence of a Highly Polyphyletic and Evolving Infection AIDS Res Hum Retroviruses. 2009 Aug;25(8):727-40 2.22e-155 76 65 Naive PBMC Direct PCR Molecular epidemiology

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AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
FJ388890CY018Cyprus05-May-2005genomic DNA12316L,14P,15L,16T,27I,83L,87Q,91V,98D,120S,148V,187D,208G,225S,230I
FJ388891CY020Cyprus05-May-2005genomic DNA12316L,14P,41T,83L,96I,116A,124V,180D,194S,199R,208G,225S,230I
FJ388892CY021Cyprus05-May-2005genomic DNA82318R,10K,11T,13P,14P,16A,18K,19A,21E,22G,26E,27K,28D,54M,58I,71D,83L,86T,87Q,91F,92P,116T,120S,128D,148V,151F,154S,169F,170I,174V,178P,180D,189V,202F,203R,207S,208G,210A,218S
FJ388893CY022Cyprus05-May-2005genomic DNA12316A,14H,15L,27I,41T,58I,71D,83L,87Q,92P,96I,111P,115L,116Q,120G,148V,169F,171A,178T,183G,187D,200S,208G
FJ388894CY023Cyprus05-May-2005genomic DNA12316A,14H,15L,27I,41T,58I,71D,83L,87Q,92P,96I,111P,115L,116Q,120G,148V,169F,171A,178T,183G,187D,200S,208G
FJ388895CY028Cyprus12-May-2005genomic DNA12316L,35G,37V,44A,47G,83L,180D,230I
FJ388896CY029Cyprus12-May-2005genomic DNA12316A,14S,15M,27I,44A,68I,79D,83L,96I,116T,154K,169F,178T,180D,194S,203R,208G
FJ388956CY030Cyprus12-May-2005genomic DNA12311S,6L,14S,15L,35G,37R,40C,41T,43C,46R,53D,54G,57S,58I,71D,86A,87Q,91L,92P,96L,160S
FJ388897CY031Cyprus12-May-2005genomic DNA12316L,71D,83L,116A,120S,180D,230I
FJ388898CY032Cyprus12-May-2005genomic DNA12316L,31V,35G,37V,38R,40V,42G,43V,47G,54G,57S,66V,67R,83L,180D,225S
FJ388957CY033Cyprus12-May-2005genomic DNA12316L,14P,41T,54M,58I,71D,91N,92P,120S,135V,172I,180D,194S,208G,225S,230I
FJ388958CY035Cyprus12-May-2005genomic DNA12316L,14P,37V,38R,40V,42G,43V,47G,51Y,54G,55L,57S,71D,83L,116A,120S,154K,171V,180D,194S,225S
FJ388959CY036Cyprus18-May-2005genomic DNA12316L,14P,41T,83L,110N,116A,120H,124V,180D,199R,225S,230I
FJ388899CY037Cyprus18-May-2005genomic DNA123115L,37V,38R,40V,41T,42G,43V,47G,54A,83L,91A,120S,154K,178T,208G,225S
FJ388900CY038Cyprus18-May-2005genomic DNA12311L,2M,4K,6L,7R,15L,18T,19I,21D,24I,27E,54V,58I,71D,83L,86A,92P,96I,111P,115L,116Q,120G,128D,154K
FJ388901CY040Cyprus18-May-2005genomic DNA12316L,15L,27I,41T,71D,83L,91V,115V,116A,120S,124V,128D,148V,169F,178T,180D,203R,208G,210S,225S,230I
FJ388902CY048Cyprus26-May-2005genomic DNA12313G,6A,11T,14S,15M,27I,54M,58I,71D,83T,92P,120S,124V,148V,169F,180D,194S,200S,203R,208G
FJ388903CY051Cyprus02-Jun-2005genomic DNA12316A,14N,15L,24M,27I,58I,71D,83L,86A,92P,96I,111P,115L,116Q,120G,128D,148V,154K,169F,171A,178T,183G,194S,200S,208G
FJ388904CY055Cyprus09-Jun-2005genomic DNA12313I,6L,15M,41V,83T,87Q,96I,110N,116Q,120S,124V,135V,154K,180D
FJ388905CY056Cyprus09-Jun-2005genomic DNA12313G,6L,83L,148V,163E,180D
FJ388906CY057Cyprus09-Jun-2005genomic DNA12316A,11T,14S,15M,27I,33G,54M,58I,71D,83L,86A,87Q,91F,92P,120S,128D,148V,169F,178T,180D,203R,207S,208G
FJ388907CY058Cyprus09-Jun-2005genomic DNA12316A,11T,14S,15M,27I,54M,58I,71D,83L,86A,87Q,91F,92P,120S,128D,148V,169F,178T,180D,203R,207S,208G
FJ388908CY063Cyprus23-Jun-2005genomic DNA12316A,32P,50T,71D,75D,83L,86P,87Q,92P,96L,120S,148V,169F,178T,187D,200S,203R,208G,225S
FJ388909CY064Cyprus23-Jun-2005genomic DNA12316A,15V,27I,30R,54M,58I,71D,77I,78L,83I,91N,92P,102T,120S,148V,154K,169F,171A,180D,183S,191I,200S,204S,207T,208G
FJ388910CY065Cyprus23-Jun-2005genomic DNA12316V,14P,15L,30Q,83L,116A,154K,177C,178T,194S,208G
FJ388911CY067Cyprus30-Jun-2005genomic DNA12316L,83L,194S,230I
FJ388912CY068Cyprus30-Jun-2005genomic DNA12316M,27I,148I,194S,208G,225S
FJ388913CY069Cyprus30-Jun-2005genomic DNA12316L,15L,27I,41T,71D,83L,116A,124V,148V,154K,169F,178T,180D,187D,203R,208G,225S
FJ388960CY070Cyprus30-Jun-2005genomic DNA12311S,3M,6L,7L,9E,13H,14P,18T,24W,83L,180D
FJ388914CY072Cyprus30-Jun-2005genomic DNA12316L,14P,41T,83L,120H,124V,135V,154K,171I,180D,225S,230I
FJ388915CY074Cyprus07-Jul-2005genomic DNA123118T,25R,41A,68I,83L,91V,115V,116A,120S,132K,136M,148V,216A
FJ388916CY075Cyprus07-Jul-2005genomic DNA123141V,77V,83T,86A,87Q,91V,96I,110N,116Q,120S,124V,135V,154K
FJ388961CY077Cyprus14-Jul-2005genomic DNA12316L,14S,27I,41T,83L,120H,124V,180D,194S,199R,225S,230I
FJ388917CY081Cyprus21-Jul-2005genomic DNA12316A,14S,27I,54M,58I,71D,79D,83T,92P,120S,124V,148I,169F,171C,178T,200S,207T,208G,225S
FJ388962CY082Cyprus21-Jul-2005genomic DNA12316L,14P,41T,83L,120H,124V,180D,194S,199R,225S,230I
FJ388918CY087Cyprus01-Sep-2005genomic DNA123115L,41A,68I,83L,116A,132K,136M,148V,216A
FJ388919CY088Cyprus01-Sep-2005genomic DNA12313L,6L,10K,13R,14P,15M,18T,44A,78S,83L,91N,92P,116A,120G,123G,148V,180D,225S,230I
FJ388920CY089Cyprus01-Sep-2005genomic DNA12316L,14P,44A,83L,91N,92P,116A,120G,123G,124V,148I,180D,225S,230I
FJ388921CY090Cyprus15-Sep-2005genomic DNA12316V,15L,27I,31S,41V,71D,92P,116A,124V,132K,135V,148V,154K,169F,178T,187D,200H,208G,225T,230I
FJ388922CY092Cyprus22-Sep-2005genomic DNA12316L,14G,15L,41A,83L,86A,91V,116A,132K,136M,148S,154K,208G,225S
FJ388923CY093Cyprus22-Sep-2005genomic DNA12316L,14P,41T,83L,120H,124V,180D,194S,199R,203R,225S,230I
FJ388963CY096Cyprus29-Sep-2005genomic DNA12316L,14P,83L,154K,171V,180D,194S,225S
FJ388924CY097Cyprus29-Sep-2005genomic DNA12316L,14P,83M,91N,116A,120G,123A,180D,194S,225S,230I
FJ388964CY100Cyprus06-Oct-2005genomic DNA12316L,27I,29D,86I,87Q,91V,96V,112S,116A,118I,120K,128K,129T,130F,132K,133G,134K,135S,137E,148V,178T,199R,225S
FJ388925CY106Cyprus13-Oct-2005genomic DNA12316A,10F,11I,14N,15L,27I,31E,54V,58I,71D,83L,87Q,92P,96I,111P,115L,116Q,120G,128D,148V,154K,169F,171A,178T,183G,194S,200S,207T,208G,225S
FJ388926CY107Cyprus13-Oct-2005genomic DNA12316M
FJ388927CY110Cyprus13-Oct-2005genomic DNA12316L,31V,35G,37V,40G,43*,48A,96I,97K,101E,113K,116E,117*,128K,133*,137K,152N,156E,159K,163N,166N,173K,178T,184*,187K,191I,194S,206E,212K,213K,214I
FJ388928CY111Cyprus13-Oct-2005genomic DNA12316A,14S,15L,27I,29A,31G,33N,54M,58I,71D,83L,87Q,92P,120S,124V,128D,148V,169F,178T,200A,203R,208G
FJ388929CY112Cyprus13-Oct-2005genomic DNA12316A,14S,15L,27I,29R,30A,31G,32Y,33N,54M,58I,71D,83L,87Q,92P,110N,120G,124V,128D,148V,169F,178T,200A,203R,208G
FJ388930CY113Cyprus20-Oct-2005genomic DNA12316L,7P,12L,18K,71D,83L,116A,128D,136M,180D
FJ388931CY120Cyprus03-Nov-2005genomic DNA12316L
FJ388932CY121Cyprus03-Nov-2005genomic DNA1423114V,15L,17G,18G,19K,24E,26I,26I_VKARGKETI*TKTSSMGKQGAGKIRT*P*PFRNSKRMSTNNRTVTTSSQHRDRRT*III*YSSNPLLCTSTDRCKRRTPSQKLQGP*EKGLLEMWEGGTPNERLH*KTG*FFRENLAFQQGKAREFSSEQTGANSSTSSRDLWD,27R,28G,54V,58I,71D,83L,86P,92P,96I,111P,115L,116Q,120G,121T,128D,148V,154K,169F,171A,178T,183G,194S,200S,207S,208G
FJ403482CY122Cyprus03-Nov-2005genomic DNA52315T,6L,7P,10E,11E,12I,13R,14G,18K,20F,21I,23G,24G,26I,27I,28K,29K,83L,119S,144R,147R,229S
FJ388933CY124Cyprus10-Nov-2005genomic DNA12316L,37V,71D,83L,180D,194S,230I
FJ388934CY130Cyprus10-Nov-2005genomic DNA12316L,31S,39P,47V,48S,49R,50R,53I,54N,59M,83L,91V,108S,121Y,148V,180D,194S
FJ388935CY131Cyprus10-Nov-2005genomic DNA12316L,27I,83L,86P,87Q,96I,98D,120S,127E,128R,129S,130F,135F,136R,148V,178T,225S
FJ388936CY132Cyprus17-Nov-2005genomic DNA12313A,6L,14P,18T,44A,83L,138I,148V,180D,225S,230I
FJ388937CY137Cyprus24-Nov-2005genomic DNA12316L,11G,13P,117R,128K
FJ388938CY140Cyprus24-Nov-2005genomic DNA12315G,6A,11M,14N,15L,27I,54V,58I,71D,83L,92P,96I,111P,115L,116Q,120G,128D,154K,160T,169F,171A,178T,183G,200S,207T,208G
FJ388939CY141Cyprus24-Nov-2005genomic DNA12316L,29A,31D,32L,83L,93A,111F,125R,129L,131N,133R,148V,180D,194S,231F
FJ388965CY142Cyprus24-Nov-2005genomic DNA12312L,3G,5M,6V,9E,11S,12L,15L,16X,22C,24G,27F,28K,83L,120H,132K,134L,135T,154K
FJ388940CY149Cyprus08-Dec-2005genomic DNA12316L,14P,37V,83L,86A,87Q,91V,98D,120S,148V,216A
FJ388941CY150Cyprus08-Dec-2005genomic DNA12312L,3W,4R,5K,6F,11G,13P,15L,18K,19N,28K,83L,91V,136M,139I
FJ388942CY153Cyprus15-Dec-2005genomic DNA12316A,11I,14N,15L,27I,30T,54V,58I,71D,83L,92P,96L,111P,115L,116Q,120G,121T,128D,148V,154K,169F,170R,171A,178T,183G,200S,207S,208G,210S
FJ388943CY154Cyprus12-Jan-2006genomic DNA12312V,6A,11I,14P,15L,27I,31G,33N,54M,58I,71D,83L,92P,111T,116A,120G,128D,148V,169F,178T,200A,203R,207T,208G
FJ388944CY158Cyprus19-Jan-2006genomic DNA12313M,4A,6G,7P,9A,12P,13S,14N,16L,18Q,19N,20F,22G,25E,26G,27I,28K,29D,30Q,54M,58I,71D,79D,83T,91V,96V,120S,148V,169F,178T,200S,203R,208G,225S
FJ388945CY163Cyprus02-Feb-2006genomic DNA12316L,19I,21S,27I,50H,83L,116D,120S,124V,148V,180D,208G
FJ388947CY165Cyprus16-Feb-2006genomic DNA12316L,7L,9E,15L,20F,41T,83L,96I,107S,116A,124V,180D,203R,225S,230I
FJ388948CY166Cyprus13-Apr-2006genomic DNA12316L,27I,36I,41T,71D,83L,115V,116A,124V,128D,148V,169F,178T,187D,203R,208G,210S
FJ388949CY168Cyprus18-May-2006genomic DNA32313G,6S,9X,11G,13S,14P,16F,18*,20F,27I,28K,180D,208G,225S,230I
FJ388950CY171Cyprus22-Jun-2006genomic DNA12316A,11T,14P,27I,54M,58I,71D,83L,86A,87Q,91F,92P,120S,128D,148V,169F,178T,203R,208G
FJ388951CY173Cyprus06-Jul-2006genomic DNA12316A,11I,14S,15M,27I,54M,58I,71D,83L,86A,87Q,91F,92P,120S,128D,148V,169F,178T,180D,203R,208G
FJ388952CY176Cyprus21-Sep-2006genomic DNA12316L,14P,27I,29D,30Q,41T,66L,71D,83L,88G,92Q,93A,105E,116A,120S,131E,148V,154K,169F,178T,183G,187D,200N,203R,208G,210S,225S
FJ388953CY178Cyprus02-Nov-2006genomic DNA12316A,11I,14N,15L,27I,35G,40V,54M,58I,71D,83L,86I,87Q,92P,96L,111P,115L,116Q,120G,128D,148V,154K,169F,178T,183G,191I,200G,203R,207S,208G,225S
FJ388954CY179Cyprus30-Nov-2006genomic DNA12316A,14P,31G,33N,54M,58I,79D,83A,92P,148V,178T,200S,207S,208G,225S
FJ388955CY180Cyprus21-Dec-2006genomic DNA12316L,15L,35*,37V,38R,42G,43V,47G,54G,57S,66V,67R,83L,87Q,91V,96I,116A,120H,128D,136I,148I,154K,178T,185T,187Q,208G,215I,230L

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