Genbank References: capsid (p24)

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Genbank References: capsid (p24)

Authors	Title	Citation	E-value	# in Gb	#Pts	ART	Source	Cloning	StudyType
Chopera (2011)	Virological and Immunological Factors Associated with HIV-1 Differential Disease Progression in HLA-B*58:01-Positive Individuals	J. Virol. 85 (14), 7070-7080 (2011)	5.99e-163	476	6	Naive	Plasma	SGS	HLA

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Accession	IsolateName	Country	Coll Date	MolType	Note	FirstAA	LastAA	MutList
JF704680	CAP037_2_00	South Africa	07-Jun-2006	genomic DNA	subtype: C	1	231	6L,14S,15L,27I,41T,71D,91V,116A,120S,124V,148V,169F,178T,180D,187D,203R,208G
JF704681	CAP037_2_05	South Africa	27-Jul-2006	genomic DNA	subtype: C	1	231	6L,14S,15L,27I,41T,71D,91V,116A,120S,124V,148V,169F,178T,180D,187D,203R,208G
JF704682	CAP037_3_08	South Africa	20-Sep-2006	genomic DNA	subtype: C	1	231	6L,14S,15L,27I,41T,71D,91V,116A,120S,124V,148V,169F,178T,180D,187D,203R,208G
JF704683	CAP040_2_01	South Africa	25-Apr-2006	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,96L,110S,116A,120S,124V,128D,148V,154K,169F,171C,178T,180D,187D,191T,208G,225S
JF704684	CAP040_2_06	South Africa	21-Jun-2006	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,96L,110S,116A,120S,124V,128D,148V,154K,169F,171C,178T,180D,187D,191T,208G,225S
JF704685	CAP040_3_09	South Africa	30-Aug-2006	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,96L,110S,116A,120S,124V,128D,148V,154K,169F,171C,178T,180D,187D,191T,207T,208G,225S
JF704686	CAP040_3_09_1	South Africa	30-Aug-2006	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,91V,96L,110S,116A,120S,124V,128D,148V,154K,169F,171C,178T,180D,187D,191T,208G,225S
JF704687	CAP129_2_00	South Africa	27-Jun-2006	genomic DNA	subtype: C	1	231	6L,14P,27I,41T,50T,64G,71D,83L,91H,92P,96L,116T,128D,148V,154K,169F,171V,178T,180D,200I,204G,225S
JF704688	CAP129_2_05	South Africa	15-Aug-2006	genomic DNA	subtype: C	1	231	6L,14P,27I,41T,50T,64G,71D,83L,91H,92P,96L,116T,128D,148V,154K,169F,171V,178T,180D,200I,204G,225S
JF704689	CAP129_3_09	South Africa	07-Nov-2006	genomic DNA	subtype: C	1	231	6L,14P,15M,27I,41T,50T,64G,71D,83L,91H,92P,96L,116T,128D,148V,154K,169F,171V,178T,180D,200I,204G,225S
JF704690	CAP136_2_00	South Africa	04-Jul-2006	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,180D,187D,203R,208G,225S
JF704691	CAP136_2_05	South Africa	24-Aug-2006	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,91V,116A,120S,124V,148V,169F,178T,187D,203R,208G,225S
JF704692	CAP136_3_09	South Africa	16-Nov-2006	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,91V,116A,120S,124V,148V,169F,178T,187D,203R,208G,225S
JF704693	CAP137_2_00	South Africa	10-May-2006	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,110S,116A,120G,124V,128D,148V,169F,178T,180D,187D,203R,208G
JF704694	CAP137_2_04	South Africa	14-Jun-2006	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,110S,116A,120G,124V,128D,148V,169F,178T,180D,187D,203R,208G
JF704695	CAP137_3_08CL	South Africa	31-Aug-2006	genomic DNA	subtype: C	1	231	6L,41T,71D,83I,116A,120S,124V,148V,154K,169F,170R,171V,178T,180D,187D,203R,204G,208G,225S
JF704696	CAP137_3_08LD	South Africa	31-Aug-2006	genomic DNA	subtype: C	1	231	6L,41T,71D,83I,116A,120S,124V,148V,154K,169F,170R,171V,178T,180D,187D,203R,204G,208G,225S
JF704697	CAP177_1_11	South Africa	07-Mar-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,75D,83L,116T,120S,128D,148V,169F,178T,187D,208G,210N
JF704698	CAP177_2_00	South Africa	23-Mar-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,75D,83L,116T,120S,128D,148V,169F,178T,187D,208G,210N
JF704699	CAP177_2_06	South Africa	23-May-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,75D,83L,116A,120S,128D,148V,169F,187D,208G,210N
JF704700	CAP177_3_09	South Africa	15-Aug-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,75D,83L,116A,120S,128D,148V,169F,178T,187D,208G,210N
JF704661	CAP217_2_00	South Africa	23-Jan-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704235	CAP217_2_00_Clone1	South Africa	23-Jan-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704236	CAP217_2_00_Clone2	South Africa	23-Jan-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704237	CAP217_2_00_Clone3	South Africa	23-Jan-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704238	CAP217_2_00_Clone4	South Africa	23-Jan-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704239	CAP217_2_00_Clone5	South Africa	23-Jan-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704240	CAP217_2_00_Clone6	South Africa	23-Jan-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704662	CAP217_2_03	South Africa	10-Feb-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704241	CAP217_2_03_Clone1	South Africa	10-Feb-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704242	CAP217_2_03_Clone2	South Africa	10-Feb-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704243	CAP217_2_03_Clone3	South Africa	10-Feb-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704244	CAP217_2_04_Clone1	South Africa	28-Feb-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,78T,91V,98D,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704253	CAP217_2_04_Clone10	South Africa	28-Feb-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704254	CAP217_2_04_Clone11	South Africa	28-Feb-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,114E,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704255	CAP217_2_04_Clone12	South Africa	28-Feb-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704256	CAP217_2_04_Clone13	South Africa	28-Feb-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704257	CAP217_2_04_Clone14	South Africa	28-Feb-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704258	CAP217_2_04_Clone15	South Africa	28-Feb-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,112P,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704259	CAP217_2_04_Clone16	South Africa	28-Feb-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704659	CAP217_2_04_Clone17	South Africa	28-Feb-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,112P,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704660	CAP217_2_04_Clone18	South Africa	28-Feb-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704245	CAP217_2_04_Clone2	South Africa	28-Feb-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704246	CAP217_2_04_Clone3	South Africa	28-Feb-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,112P,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704247	CAP217_2_04_Clone4	South Africa	28-Feb-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,112P,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704248	CAP217_2_04_Clone5	South Africa	28-Feb-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704249	CAP217_2_04_Clone6	South Africa	28-Feb-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704250	CAP217_2_04_Clone7	South Africa	28-Feb-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,64P,71D,91V,98D,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704251	CAP217_2_04_Clone8	South Africa	28-Feb-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704252	CAP217_2_04_Clone9	South Africa	28-Feb-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704663	CAP217_2_05	South Africa	13-Mar-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704260	CAP217_2_05_Clone1	South Africa	13-Mar-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704269	CAP217_2_05_Clone10	South Africa	13-Mar-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,112P,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704270	CAP217_2_05_Clone11	South Africa	13-Mar-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704271	CAP217_2_05_Clone12	South Africa	13-Mar-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704261	CAP217_2_05_Clone2	South Africa	13-Mar-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,112P,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704262	CAP217_2_05_Clone3	South Africa	13-Mar-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704263	CAP217_2_05_Clone4	South Africa	13-Mar-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704264	CAP217_2_05_Clone5	South Africa	13-Mar-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,112P,116A,120S,128D,148V,169F,178T,187D,194T,203R,208G
JF704265	CAP217_2_05_Clone6	South Africa	13-Mar-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704266	CAP217_2_05_Clone7	South Africa	13-Mar-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,112P,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704267	CAP217_2_05_Clone8	South Africa	13-Mar-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704268	CAP217_2_05_Clone9	South Africa	13-Mar-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704272	CAP217_2_06_Clone1	South Africa	27-Mar-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704281	CAP217_2_06_Clone10	South Africa	27-Mar-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704282	CAP217_2_06_Clone11	South Africa	27-Mar-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704283	CAP217_2_06_Clone12	South Africa	27-Mar-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,110N,116A,120G,128D,148V,169F,178T,187D,203R,208G
JF704273	CAP217_2_06_Clone2	South Africa	27-Mar-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704274	CAP217_2_06_Clone3	South Africa	27-Mar-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704275	CAP217_2_06_Clone4	South Africa	27-Mar-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704276	CAP217_2_06_Clone5	South Africa	27-Mar-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704277	CAP217_2_06_Clone6	South Africa	27-Mar-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704278	CAP217_2_06_Clone7	South Africa	27-Mar-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704279	CAP217_2_06_Clone8	South Africa	27-Mar-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,110N,116A,120S,128D,148V,169F,178T,187D,191A,203R,208G
JF704280	CAP217_2_06_Clone9	South Africa	27-Mar-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704664	CAP217_2_07	South Africa	24-Apr-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704284	CAP217_2_07_Clone1	South Africa	24-Apr-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704285	CAP217_2_07_Clone2	South Africa	24-Apr-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704286	CAP217_2_07_Clone3	South Africa	24-Apr-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,112T,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704287	CAP217_2_07_Clone4	South Africa	24-Apr-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704288	CAP217_2_07_Clone5	South Africa	24-Apr-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704289	CAP217_2_07_Clone6	South Africa	24-Apr-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704290	CAP217_2_07_Clone7	South Africa	24-Apr-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704291	CAP217_2_07_Clone8	South Africa	24-Apr-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704292	CAP217_2_07_Clone9	South Africa	24-Apr-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704665	CAP217_2_08	South Africa	23-May-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704293	CAP217_2_08_Clone1	South Africa	23-May-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704301	CAP217_2_08_Clone10	South Africa	23-May-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704294	CAP217_2_08_Clone2	South Africa	23-May-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704302	CAP217_2_08_Clone3	South Africa	23-May-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,110N,116A,120S,128D,148V,154G,169F,178T,187D,203R,208G
JF704295	CAP217_2_08_Clone4	South Africa	23-May-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704296	CAP217_2_08_Clone5	South Africa	23-May-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704297	CAP217_2_08_Clone6	South Africa	23-May-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704298	CAP217_2_08_Clone7	South Africa	23-May-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704299	CAP217_2_08_Clone8	South Africa	23-May-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704300	CAP217_2_08_Clone9	South Africa	23-May-2006	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,98D,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704666	CAP217_3_16	South Africa	11-Jan-2007	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704303	CAP217_3_16_Clone1	South Africa	11-Jan-2007	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704312	CAP217_3_16_Clone10	South Africa	11-Jan-2007	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704313	CAP217_3_16_Clone11	South Africa	11-Jan-2007	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704314	CAP217_3_16_Clone12	South Africa	11-Jan-2007	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704315	CAP217_3_16_Clone13	South Africa	11-Jan-2007	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704316	CAP217_3_16_Clone14	South Africa	11-Jan-2007	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704304	CAP217_3_16_Clone2	South Africa	11-Jan-2007	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704305	CAP217_3_16_Clone3	South Africa	11-Jan-2007	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704306	CAP217_3_16_Clone4	South Africa	11-Jan-2007	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704307	CAP217_3_16_Clone5	South Africa	11-Jan-2007	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704308	CAP217_3_16_Clone6	South Africa	11-Jan-2007	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704309	CAP217_3_16_Clone7	South Africa	11-Jan-2007	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704310	CAP217_3_16_Clone8	South Africa	11-Jan-2007	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704311	CAP217_3_16_Clone9	South Africa	11-Jan-2007	genomic DNA	subtype: C	1	231	6L,15L,27I,41T,71D,91V,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
JF704701	CAP222_2_00	South Africa	04-May-2006	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,91A,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
JF704702	CAP222_2_05	South Africa	21-Jun-2006	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,91A,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
JF704703	CAP222_3_09	South Africa	19-Sep-2006	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,91A,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
JF704667	CAP229_2_00	South Africa	19-Jul-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,116A,128D,148V,169F,178T,180D,187D,203R,208G
JF704317	CAP229_2_00_Clone1	South Africa	19-Jul-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,116A,128D,148V,169F,178T,180D,187D,203R,208G
JF704326	CAP229_2_00_Clone10	South Africa	19-Jul-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,116A,128D,148V,169F,178T,180D,187D,203R,208G
JF704327	CAP229_2_00_Clone11	South Africa	19-Jul-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,116A,128D,148V,169F,178T,180D,187D,203R,208G
JF704328	CAP229_2_00_Clone12	South Africa	19-Jul-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,116A,128D,148V,169F,178T,180D,187D,203R,208G
JF704318	CAP229_2_00_Clone2	South Africa	19-Jul-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,116A,128D,148V,169F,178T,180D,187D,203R,208G
JF704319	CAP229_2_00_Clone3	South Africa	19-Jul-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,116A,128D,148V,169F,178T,180D,187D,203R,208G
JF704320	CAP229_2_00_Clone4	South Africa	19-Jul-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,116A,128D,148V,169F,178T,180D,187D,203R,208G
JF704321	CAP229_2_00_Clone5	South Africa	19-Jul-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,116A,128D,148V,169F,178T,180D,187D,203R,208G
JF704322	CAP229_2_00_Clone6	South Africa	19-Jul-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,116A,128D,148V,169F,178T,180D,187D,203R,208G
JF704323	CAP229_2_00_Clone7	South Africa	19-Jul-2005	genomic DNA	subtype: C	1	231	6L,27I,29K,41T,71D,96I,116A,128D,148V,169F,178T,180D,187D,203R,208G
JF704324	CAP229_2_00_Clone8	South Africa	19-Jul-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,116A,128D,148V,169F,178T,180D,187D,203R,208G
JF704325	CAP229_2_00_Clone9	South Africa	19-Jul-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,116A,128D,148V,169F,178T,180D,187D,203R,208G
JF704329	CAP229_2_01_Clone1	South Africa	26-Jul-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,116A,128D,148V,169F,178T,180D,187D,203R,208G
JF704338	CAP229_2_01_Clone10	South Africa	26-Jul-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,116T,128D,148V,169F,178T,180D,187D,203R,208G
JF704330	CAP229_2_01_Clone2	South Africa	26-Jul-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,116T,128D,148V,169F,178T,180D,187D,203R,208G
JF704331	CAP229_2_01_Clone3	South Africa	26-Jul-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,116A,128D,148V,169F,178T,180D,187D,198F,203R,208G
JF704332	CAP229_2_01_Clone4	South Africa	26-Jul-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,128D,148V,169F,178T,180D,187D,203R,208G
JF704333	CAP229_2_01_Clone5	South Africa	26-Jul-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,116A,128D,148V,169F,178T,180D,187D,203R,208G
JF704334	CAP229_2_01_Clone6	South Africa	26-Jul-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,68T,71D,96I,116A,128D,148V,169F,178T,180D,187D,203R,208G
JF704335	CAP229_2_01_Clone7	South Africa	26-Jul-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,116A,128D,148V,169F,178T,180D,187D,203R,208G
JF704336	CAP229_2_01_Clone8	South Africa	26-Jul-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,116A,128D,148V,169F,178T,180D,187D,203R,208G
JF704337	CAP229_2_01_Clone9	South Africa	26-Jul-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,128D,148V,169F,178T,180D,187D,203R,208G
JF704668	CAP229_2_02	South Africa	03-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,128D,148V,169F,178T,180D,187D,203R,208G
JF704339	CAP229_2_02_Clone1	South Africa	03-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,128D,148V,169F,178T,180D,187D,203R,208G
JF704340	CAP229_2_02_Clone2	South Africa	03-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,128D,148V,169F,178T,180D,187D,203R,208G
JF704341	CAP229_2_02_Clone3	South Africa	03-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,128D,148V,169F,178T,180D,187D,203R,208G
JF704342	CAP229_2_02_Clone4	South Africa	03-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,128D,148V,169F,178T,180D,187D,203R,208G
JF704343	CAP229_2_02_Clone5	South Africa	03-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,128D,148V,169F,178T,180D,187D,203R,208G
JF704344	CAP229_2_02_Clone6	South Africa	03-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,128D,148V,169F,178T,180D,187D,203R,208G
JF704669	CAP229_2_04	South Africa	25-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,128D,148V,169F,178T,180D,187D,203R,208G
JF704345	CAP229_3_08_Clone1	South Africa	27-Oct-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,178T,180D,187D,203R,208G
JF704346	CAP229_3_08_Clone2	South Africa	27-Oct-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,178T,180D,187D,203R,208G
JF704347	CAP229_3_08_Clone3	South Africa	27-Oct-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,178T,180D,187D,203R,208G
JF704670	CAP229_3_09	South Africa	24-Nov-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,178T,180D,187D,203R,208G
JF704348	CAP229_3_09_Clone1	South Africa	24-Nov-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,178T,180D,187D,203R,208G
JF704357	CAP229_3_09_Clone10	South Africa	24-Nov-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,128D,148V,169F,178T,180D,187D,203R,208G
JF704358	CAP229_3_09_Clone11	South Africa	24-Nov-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,178T,180D,187D,203R,208G
JF704359	CAP229_3_09_Clone12	South Africa	24-Nov-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,128D,148V,169F,178T,180D,187D,203R,208G
JF704360	CAP229_3_09_Clone13	South Africa	24-Nov-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,178T,180D,187D,203R,208G
JF704361	CAP229_3_09_Clone14	South Africa	24-Nov-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,128D,148V,169F,178T,180D,187D,203R,208G
JF704362	CAP229_3_09_Clone15	South Africa	24-Nov-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,128D,148V,169F,178T,180D,187D,203R,208G
JF704363	CAP229_3_09_Clone16	South Africa	24-Nov-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,128D,148V,169F,178T,180D,187D,203R,208G
JF704364	CAP229_3_09_Clone17	South Africa	24-Nov-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,128D,148V,169F,178T,180D,187D,203R,208G
JF704365	CAP229_3_09_Clone18	South Africa	24-Nov-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,178T,180D,187D,203R,208G
JF704366	CAP229_3_09_Clone19	South Africa	24-Nov-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,128D,148V,169F,178T,180D,187D,203R,208G
JF704349	CAP229_3_09_Clone2	South Africa	24-Nov-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,128D,148V,169F,178T,187D,203R,208G
JF704367	CAP229_3_09_Clone20	South Africa	24-Nov-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,128D,148V,169F,178T,180D,187D,203R,208G
JF704369	CAP229_3_09_Clone21	South Africa	24-Nov-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,178T,180D,187D,203R,208G
JF704368	CAP229_3_09_Clone22	South Africa	24-Nov-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,128D,148V,169F,178T,180D,187D,203R,208G
JF704370	CAP229_3_09_Clone23	South Africa	24-Nov-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,149N,169F,178T,180D,187D,203R,208G
JF704350	CAP229_3_09_Clone3	South Africa	24-Nov-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,178T,180D,187D,203R,208G
JF704351	CAP229_3_09_Clone4	South Africa	24-Nov-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,178T,180D,187D,203R,208G
JF704352	CAP229_3_09_Clone5	South Africa	24-Nov-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,128D,148V,169F,178T,180D,187D,203R,208G
JF704353	CAP229_3_09_Clone6	South Africa	24-Nov-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,128D,148V,169F,178T,180D,187D,203R,208G
JF704354	CAP229_3_09_Clone7	South Africa	24-Nov-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,128D,148V,169F,178T,180D,187D,203R,208G
JF704355	CAP229_3_09_Clone8	South Africa	24-Nov-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,128D,148V,169F,178T,180D,187D,203R,208G
JF704356	CAP229_3_09_Clone9	South Africa	24-Nov-2005	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,128D,148V,169F,178T,180D,187D,203R,208G
JF704671	CAP229_4_18	South Africa	12-Dec-2006	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,178T,180D,187D,203R,208G
JF704371	CAP229_4_18_Clone1	South Africa	12-Dec-2006	genomic DNA	subtype: C	1	231	6L,20S,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,178T,180D,187D,203R,208G
JF704380	CAP229_4_18_Clone10	South Africa	12-Dec-2006	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,178T,180D,187D,203R,208G
JF704381	CAP229_4_18_Clone11	South Africa	12-Dec-2006	genomic DNA	subtype: C	1	231	6L,20S,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,178T,180D,187D,203R,208G
JF704382	CAP229_4_18_Clone12	South Africa	12-Dec-2006	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,178T,180D,187D,203R,208G
JF704383	CAP229_4_18_Clone13	South Africa	12-Dec-2006	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,178T,180D,187D,203R,208G
JF704384	CAP229_4_18_Clone14	South Africa	12-Dec-2006	genomic DNA	subtype: C	1	231	6L,27I,41T,71G,96I,110N,116T,120S,128D,148V,169F,178T,180D,187D,203R,208G
JF704385	CAP229_4_18_Clone15	South Africa	12-Dec-2006	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,178T,180D,187D,203R,208G
JF704372	CAP229_4_18_Clone2	South Africa	12-Dec-2006	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,178T,180D,187D,203R,208G
JF704373	CAP229_4_18_Clone3	South Africa	12-Dec-2006	genomic DNA	subtype: C	1	231	6L,12Y,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,178T,180D,187D,203R,208G
JF704374	CAP229_4_18_Clone4	South Africa	12-Dec-2006	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,178T,180D,187D,203R,208G
JF704375	CAP229_4_18_Clone5	South Africa	12-Dec-2006	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,178T,180D,187D,203R,208G
JF704376	CAP229_4_18_Clone6	South Africa	12-Dec-2006	genomic DNA	subtype: C	1	231	6L,20S,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,178T,180D,187D,203R,208G
JF704377	CAP229_4_18_Clone7	South Africa	12-Dec-2006	genomic DNA	subtype: C	1	231	6L,27I,41T,54A,71D,96I,110N,116T,120S,128D,148V,169F,178T,180D,187D,203R,208G
JF704378	CAP229_4_18_Clone8	South Africa	12-Dec-2006	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,178T,180D,187D,203R,208G
JF704379	CAP229_4_18_Clone9	South Africa	12-Dec-2006	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,178T,180D,187D,203R,208G
JF704386	CAP229_4_19_Clone1	South Africa	08-Mar-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,187D,203R,208G
JF704395	CAP229_4_19_Clone10	South Africa	08-Mar-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,187D,203R,208G
JF704397	CAP229_4_19_Clone11	South Africa	08-Mar-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,187D,203R,208G
JF704396	CAP229_4_19_Clone12	South Africa	08-Mar-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,187D,203R,208G
JF704399	CAP229_4_19_Clone13	South Africa	08-Mar-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,187D,203R,208G
JF704398	CAP229_4_19_Clone14	South Africa	08-Mar-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,187D,203R,208G
JF704400	CAP229_4_19_Clone15	South Africa	08-Mar-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,187D,203R,208G
JF704401	CAP229_4_19_Clone16	South Africa	08-Mar-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,187D,203R,208G
JF704403	CAP229_4_19_Clone17	South Africa	08-Mar-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,137R,148V,169F,187D,203R,208G
JF704404	CAP229_4_19_Clone18	South Africa	08-Mar-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,187D,203R,208G
JF704405	CAP229_4_19_Clone19	South Africa	08-Mar-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,187D,203R,208G
JF704387	CAP229_4_19_Clone2	South Africa	08-Mar-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,187D,203R,208G
JF704406	CAP229_4_19_Clone20	South Africa	08-Mar-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,187D,203R,208G
JF704408	CAP229_4_19_Clone21	South Africa	08-Mar-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,187D,203R,208G
JF704409	CAP229_4_19_Clone22	South Africa	08-Mar-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,187D,203R,208G
JF704402	CAP229_4_19_Clone23	South Africa	08-Mar-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,187D,203R,208G
JF704407	CAP229_4_19_Clone24	South Africa	08-Mar-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,187D,203R,208G
JF704388	CAP229_4_19_Clone3	South Africa	08-Mar-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,187D,203R,208G
JF704389	CAP229_4_19_Clone4	South Africa	08-Mar-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,187D,203R,208G
JF704390	CAP229_4_19_Clone5	South Africa	08-Mar-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,187D,203R,208G
JF704391	CAP229_4_19_Clone6	South Africa	08-Mar-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,187D,203R,208G
JF704392	CAP229_4_19_Clone7	South Africa	08-Mar-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,187D,203R,208G
JF704393	CAP229_4_19_Clone8	South Africa	08-Mar-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,187D,203R,208G
JF704394	CAP229_4_19_Clone9	South Africa	08-Mar-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,187D,203R,208G
JF704410	CAP229_4_20_Clone1	South Africa	07-Jun-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,187D,203R,208G
JF704419	CAP229_4_20_Clone10	South Africa	07-Jun-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,187D,203R,208G
JF704420	CAP229_4_20_Clone11	South Africa	07-Jun-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,187D,203R,208G
JF704421	CAP229_4_20_Clone12	South Africa	07-Jun-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,187D,203R,208G
JF704422	CAP229_4_20_Clone13	South Africa	07-Jun-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,187D,203R,208G
JF704423	CAP229_4_20_Clone14	South Africa	07-Jun-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,187D,203R,208G
JF704424	CAP229_4_20_Clone15	South Africa	07-Jun-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,187D,203R,208G
JF704411	CAP229_4_20_Clone2	South Africa	07-Jun-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,187D,203R,208G
JF704412	CAP229_4_20_Clone3	South Africa	07-Jun-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,105T,110N,116T,120S,128D,148V,169F,187D,203R,208G
JF704413	CAP229_4_20_Clone4	South Africa	07-Jun-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,187D,203R,208G
JF704414	CAP229_4_20_Clone5	South Africa	07-Jun-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,187D,203R,208G
JF704415	CAP229_4_20_Clone6	South Africa	07-Jun-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,180G,187D,203R,208G
JF704416	CAP229_4_20_Clone7	South Africa	07-Jun-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,187D,203R,208G
JF704417	CAP229_4_20_Clone8	South Africa	07-Jun-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,187D,203R,208G
JF704418	CAP229_4_20_Clone9	South Africa	07-Jun-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,187D,203R,208G
JF704425	CAP229_4_21_Clone1	South Africa	04-Oct-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,187D,203R,208G
JF704434	CAP229_4_21_Clone10	South Africa	04-Oct-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,187D,188A,203R,208G
JF704435	CAP229_4_21_Clone11	South Africa	04-Oct-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,187D,203R,208G
JF704436	CAP229_4_21_Clone12	South Africa	04-Oct-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,187D,203R,208G
JF704437	CAP229_4_21_Clone13	South Africa	04-Oct-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,187D,203R,208G
JF704438	CAP229_4_21_Clone14	South Africa	04-Oct-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,187D,203R,208G
JF704439	CAP229_4_21_Clone15	South Africa	04-Oct-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,187D,203R,208G
JF704440	CAP229_4_21_Clone16	South Africa	04-Oct-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,187D,203R,208G
JF704426	CAP229_4_21_Clone2	South Africa	04-Oct-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,187D,203R,208G
JF704427	CAP229_4_21_Clone3	South Africa	04-Oct-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,187D,203R,208G
JF704428	CAP229_4_21_Clone4	South Africa	04-Oct-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,187D,203R,208G
JF704429	CAP229_4_21_Clone5	South Africa	04-Oct-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,187D,203R,208G
JF704430	CAP229_4_21_Clone6	South Africa	04-Oct-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,178T,180D,187D,203R,208G
JF704431	CAP229_4_21_Clone7	South Africa	04-Oct-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,187D,203R,208G
JF704432	CAP229_4_21_Clone8	South Africa	04-Oct-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,187D,203R,208G
JF704433	CAP229_4_21_Clone9	South Africa	04-Oct-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,96I,110N,116T,120S,128D,148V,169F,187D,203R,208G
JF704441	CAP239_1_02_Clone1	South Africa	19-Jul-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,115V,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704450	CAP239_1_02_Clone10	South Africa	19-Jul-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,115V,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704451	CAP239_1_02_Clone11	South Africa	19-Jul-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,115V,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704452	CAP239_1_02_Clone12	South Africa	19-Jul-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,115V,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704453	CAP239_1_02_Clone13	South Africa	19-Jul-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,115V,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704454	CAP239_1_02_Clone14	South Africa	19-Jul-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,115V,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704455	CAP239_1_02_Clone15	South Africa	19-Jul-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,115V,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704456	CAP239_1_02_Clone16	South Africa	19-Jul-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,115V,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704457	CAP239_1_02_Clone17	South Africa	19-Jul-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,115V,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704458	CAP239_1_02_Clone18	South Africa	19-Jul-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,111I,115V,116T,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704459	CAP239_1_02_Clone19	South Africa	19-Jul-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,115V,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704442	CAP239_1_02_Clone2	South Africa	19-Jul-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,115V,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704460	CAP239_1_02_Clone20	South Africa	19-Jul-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,115V,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704461	CAP239_1_02_Clone21	South Africa	19-Jul-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,115V,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704443	CAP239_1_02_Clone3	South Africa	19-Jul-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,115V,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704444	CAP239_1_02_Clone4	South Africa	19-Jul-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,115V,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704445	CAP239_1_02_Clone5	South Africa	19-Jul-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,115V,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704446	CAP239_1_02_Clone6	South Africa	19-Jul-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,115V,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704447	CAP239_1_02_Clone7	South Africa	19-Jul-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,115V,116A,120S,124V,128D,148V,169F,177D,178T,187D,203R,208G
JF704448	CAP239_1_02_Clone8	South Africa	19-Jul-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,115V,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704449	CAP239_1_02_Clone9	South Africa	19-Jul-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,115V,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704672	CAP239_2_00	South Africa	10-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,115V,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704462	CAP239_2_00_Clone1	South Africa	10-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116T,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704471	CAP239_2_00_Clone10	South Africa	10-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116T,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704472	CAP239_2_00_Clone11	South Africa	10-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116T,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704474	CAP239_2_00_Clone12	South Africa	10-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116T,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704473	CAP239_2_00_Clone13	South Africa	10-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116T,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704475	CAP239_2_00_Clone14	South Africa	10-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116T,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704476	CAP239_2_00_Clone15	South Africa	10-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116T,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704477	CAP239_2_00_Clone16	South Africa	10-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116T,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704478	CAP239_2_00_Clone17	South Africa	10-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116T,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704479	CAP239_2_00_Clone18	South Africa	10-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116T,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704480	CAP239_2_00_Clone19	South Africa	10-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116T,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704463	CAP239_2_00_Clone2	South Africa	10-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116T,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704481	CAP239_2_00_Clone20	South Africa	10-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71N,83L,87Q,91V,110N,115V,116T,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704482	CAP239_2_00_Clone21	South Africa	10-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116T,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704483	CAP239_2_00_Clone22	South Africa	10-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116T,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704484	CAP239_2_00_Clone23	South Africa	10-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116T,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704485	CAP239_2_00_Clone24	South Africa	10-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116T,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704486	CAP239_2_00_Clone25	South Africa	10-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116T,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704487	CAP239_2_00_Clone26	South Africa	10-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116T,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704488	CAP239_2_00_Clone27	South Africa	10-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116T,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704464	CAP239_2_00_Clone3	South Africa	10-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116T,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704465	CAP239_2_00_Clone4	South Africa	10-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116T,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704466	CAP239_2_00_Clone5	South Africa	10-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116T,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704467	CAP239_2_00_Clone6	South Africa	10-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116T,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704468	CAP239_2_00_Clone7	South Africa	10-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116T,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704469	CAP239_2_00_Clone8	South Africa	10-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116T,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704470	CAP239_2_00_Clone9	South Africa	10-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116T,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704673	CAP239_2_01	South Africa	17-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116T,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704489	CAP239_2_01_Clone1	South Africa	17-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,92V,110N,115V,116T,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704498	CAP239_2_01_Clone10	South Africa	17-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116T,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704499	CAP239_2_01_Clone11	South Africa	17-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116T,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704500	CAP239_2_01_Clone12	South Africa	17-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116T,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704501	CAP239_2_01_Clone13	South Africa	17-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116T,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704502	CAP239_2_01_Clone14	South Africa	17-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116T,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704503	CAP239_2_01_Clone15	South Africa	17-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116T,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704504	CAP239_2_01_Clone16	South Africa	17-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116T,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704505	CAP239_2_01_Clone17	South Africa	17-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116T,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704506	CAP239_2_01_Clone18	South Africa	17-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116T,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704507	CAP239_2_01_Clone19	South Africa	17-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116T,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704490	CAP239_2_01_Clone2	South Africa	17-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116T,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704491	CAP239_2_01_Clone3	South Africa	17-Aug-2005	genomic DNA	subtype: C	1	206	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116T,120S,124V,128D,148V,169F,178T,187D,203R
JF704492	CAP239_2_01_Clone4	South Africa	17-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116T,120S,124V,128D,148V,169F,178T,187G,203R,208G
JF704493	CAP239_2_01_Clone5	South Africa	17-Aug-2005	genomic DNA	subtype: C	1	204	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116T,120S,124V,128D,148V,169F,178T,187D,203R
JF704494	CAP239_2_01_Clone6	South Africa	17-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116T,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704496	CAP239_2_01_Clone8	South Africa	17-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116T,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704497	CAP239_2_01_Clone9	South Africa	17-Aug-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,40V,41T,71D,83L,87Q,91V,110N,115V,116T,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704674	CAP239_2_05	South Africa	21-Sep-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704675	CAP239_3_09	South Africa	07-Dec-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704508	CAP239_3_09_Clone1	South Africa	07-Dec-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704509	CAP239_3_09_Clone2	South Africa	07-Dec-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704510	CAP239_3_09_Clone3	South Africa	07-Dec-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704511	CAP239_3_09_Clone4	South Africa	07-Dec-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704512	CAP239_3_09_Clone5	South Africa	07-Dec-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704513	CAP239_3_09_Clone6	South Africa	07-Dec-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704514	CAP239_3_09_Clone7	South Africa	07-Dec-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704515	CAP239_3_09_Clone8	South Africa	07-Dec-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704516	CAP239_3_09_Clone9	South Africa	07-Dec-2005	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704676	CAP239_4_18	South Africa	11-Jan-2007	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,96L,110N,115V,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704517	CAP239_4_18_Clone1	South Africa	11-Jan-2007	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704519	CAP239_4_18_Clone2	South Africa	11-Jan-2007	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,96L,110N,115V,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704518	CAP239_4_18_Clone3	South Africa	11-Jan-2007	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,96L,110N,115V,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704520	CAP239_4_18_Clone4	South Africa	11-Jan-2007	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,96L,110N,115V,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704521	CAP239_4_18_Clone5	South Africa	11-Jan-2007	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,96L,110N,115V,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704522	CAP239_4_18_Clone6	South Africa	11-Jan-2007	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704523	CAP239_4_18_Clone7	South Africa	11-Jan-2007	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,96L,110N,115V,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704525	CAP239_4_18_Clone8	South Africa	11-Jan-2007	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,110N,115V,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704524	CAP239_4_18_Clone9	South Africa	11-Jan-2007	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91V,96L,110N,115V,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
JF704704	CAP262_2_00	South Africa	03-Apr-2006	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
JF704705	CAP262_2_01	South Africa	11-Apr-2006	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
JF704706	CAP262_2_06	South Africa	06-Jun-2006	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
JF704707	CAP262_3_09	South Africa	17-Aug-2006	genomic DNA	subtype: C	1	231	6L,27I,36I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
JF704708	CAP264_2_00	South Africa	04-May-2006	genomic DNA	subtype: C	1	231	6L,27I,41T,50T,71D,83L,91V,116T,120G,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JF704709	CAP264_2_00_1	South Africa	04-May-2006	genomic DNA	subtype: C	1	231	6L,27I,41T,50T,71D,83L,91V,116T,120G,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JF704710	CAP264_2_07	South Africa	25-Jul-2006	genomic DNA	subtype: C	1	231	6L,27I,41T,50T,71D,83L,116T,120G,124V,128D,148V,154K,169F,178T,180D,203R,208G
JF704711	CAP264_3_10	South Africa	19-Oct-2006	genomic DNA	subtype: C	1	231	6L,27I,41T,50T,71D,83L,91V,116T,120G,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JF704677	CAP268_2_00	South Africa	19-Sep-2006	genomic DNA	subtype: C	1	231	27I,41T,71D,75D,83L,116A,118I,120G,148V,169F,178T,200N,203R,208G
JF704526	CAP268_2_00_Clone1	South Africa	19-Sep-2006	genomic DNA	subtype: C	1	231	27I,41T,71D,75D,83L,116A,118I,120G,148V,169F,178T,200N,203R,208G
JF704527	CAP268_2_00_Clone2	South Africa	19-Sep-2006	genomic DNA	subtype: C	1	231	27I,41T,71D,75D,83L,116A,118I,120G,148V,169F,178T,200N,203R,208G
JF704528	CAP268_2_00_Clone3	South Africa	19-Sep-2006	genomic DNA	subtype: C	1	231	27I,41T,71D,75D,83L,116A,118I,120G,148V,169F,178T,200N,203R,208G
JF704529	CAP268_2_00_Clone4	South Africa	19-Sep-2006	genomic DNA	subtype: C	1	231	27I,41T,71D,75D,83L,116A,118I,120G,148V,169F,178T,200N,203R,208G
JF704530	CAP268_2_00_Clone5	South Africa	19-Sep-2006	genomic DNA	subtype: C	1	231	27I,41T,71D,75D,83L,116A,118I,120G,148V,169F,178T,200N,203R,208G
JF704531	CAP268_2_00_Clone6	South Africa	19-Sep-2006	genomic DNA	subtype: C	1	231	27I,41T,71D,75D,83L,116A,118I,120G,148V,169F,178T,200N,203R,208G
JF704678	CAP268_2_05	South Africa	07-Nov-2006	genomic DNA	subtype: C	1	231	27I,41T,71D,75D,83L,116A,118I,120G,148V,169F,178T,200N,203R,208G
JF704679	CAP268_3_08	South Africa	09-Jan-2007	genomic DNA	subtype: C	1	231	27I,41T,71D,75D,83L,116A,118I,120G,148V,169F,178T,200N,203R,208G
JF704532	CAP268_3_08_Clone1	South Africa	09-Jan-2007	genomic DNA	subtype: C	1	231	27I,41T,71D,75D,83L,116A,118I,120G,148V,169F,178T,200N,203R,208G
JF704533	CAP268_3_08_Clone2	South Africa	09-Jan-2007	genomic DNA	subtype: C	1	231	27I,41T,71D,75D,83L,116A,118I,120G,148V,169F,178T,200N,203R,208G
JF704534	CAP268_3_08_Clone3	South Africa	09-Jan-2007	genomic DNA	subtype: C	1	231	27I,41T,71D,75D,83L,116A,118I,120G,148V,169F,178T,200N,203R,208G
JF704535	CAP268_3_08_Clone4	South Africa	09-Jan-2007	genomic DNA	subtype: C	1	231	27I,41T,71D,75D,83L,116A,118I,120G,148V,169F,178T,200N,203R,208G
JF704536	CAP268_3_08_Clone5	South Africa	09-Jan-2007	genomic DNA	subtype: C	1	231	27I,41T,71D,75D,83L,116A,118I,120G,148V,169F,178T,200N,203R,208G
JF704537	CAP268_3_08_Clone6	South Africa	09-Jan-2007	genomic DNA	subtype: C	1	231	27I,41T,71D,75D,83L,116A,118I,120G,148V,169F,178T,200N,203R,208G
JF704538	CAP268_3_08_Clone7	South Africa	09-Jan-2007	genomic DNA	subtype: C	1	231	27I,41T,71D,75D,83L,116A,118I,120G,148V,169F,178T,200N,203R,208G
JF704539	CAP268_3_08_Clone8	South Africa	09-Jan-2007	genomic DNA	subtype: C	1	231	27I,41T,71D,75D,83L,116A,118I,120G,148V,169F,178T,200N,203R,208G
JF704540	CAP268_3_15_Clone1	South Africa	02-Aug-2007	genomic DNA	subtype: C	1	231	27I,41T,71D,75D,83L,116A,118I,120G,148V,169F,178T,200N,203R,208G
JF704549	CAP268_3_15_Clone10	South Africa	02-Aug-2007	genomic DNA	subtype: C	1	231	27I,41T,71D,75D,83L,91V,116A,118I,120G,148V,169F,178T,200N,203R,208G
JF704550	CAP268_3_15_Clone11	South Africa	02-Aug-2007	genomic DNA	subtype: C	1	231	27I,41T,71D,75D,83L,91N,116A,118I,120G,148V,169F,178T,200N,203R,208G
JF704551	CAP268_3_15_Clone12	South Africa	02-Aug-2007	genomic DNA	subtype: C	1	231	27I,41T,71D,75D,83L,116A,118I,120G,148V,169F,178T,200N,203R,208G
JF704541	CAP268_3_15_Clone2	South Africa	02-Aug-2007	genomic DNA	subtype: C	1	231	27I,41T,71D,75D,83L,116A,118I,120G,148V,169F,178T,200N,203R,208G
JF704542	CAP268_3_15_Clone3	South Africa	02-Aug-2007	genomic DNA	subtype: C	1	231	27I,41T,71D,75D,83L,91V,116A,118I,120G,148V,169F,178T,200N,203R,208G
JF704543	CAP268_3_15_Clone4	South Africa	02-Aug-2007	genomic DNA	subtype: C	1	231	27I,41T,71D,75D,83L,91V,116A,118I,120G,148V,169F,178T,200N,203R,208G
JF704544	CAP268_3_15_Clone5	South Africa	02-Aug-2007	genomic DNA	subtype: C	1	231	27I,41T,71D,75D,83L,116A,118I,120G,148V,169F,178T,200N,203R,208G
JF704545	CAP268_3_15_Clone6	South Africa	02-Aug-2007	genomic DNA	subtype: C	1	231	27I,41T,71D,75D,83L,91V,116A,118I,120G,148V,169F,178T,200N,203R,208G
JF704546	CAP268_3_15_Clone7	South Africa	02-Aug-2007	genomic DNA	subtype: C	1	231	27I,41T,71D,75D,83L,102G,116A,118I,120G,148V,169F,178T,200N,203R,208G
JF704547	CAP268_3_15_Clone8	South Africa	02-Aug-2007	genomic DNA	subtype: C	1	231	27I,41T,71D,75D,83L,116A,118I,120G,148V,169F,178T,200N,203R,208G
JF704548	CAP268_3_15_Clone9	South Africa	02-Aug-2007	genomic DNA	subtype: C	1	231	27I,41T,71D,75D,83L,116A,118I,120G,148V,169F,178T,200N,203R,208G
JF704552	CAP268_4_18_Clone1	South Africa	20-Mar-2008	genomic DNA	subtype: C	1	231	27I,41T,71D,75D,83L,91V,116A,118I,120G,148V,169F,178T,200N,203R,208G
JF704553	CAP268_4_18_Clone2	South Africa	20-Mar-2008	genomic DNA	subtype: C	1	231	27I,41T,71D,75D,83L,91V,116A,118I,120G,148V,169F,178T,200N,203R,208G
JF704554	CAP268_4_18_Clone3	South Africa	20-Mar-2008	genomic DNA	subtype: C	1	231	27I,41T,71D,75D,83L,91V,116A,118I,120G,148V,169F,178T,200N,208G
JF704555	CAP268_4_18_Clone4	South Africa	20-Mar-2008	genomic DNA	subtype: C	1	231	27I,41T,71D,75D,83L,91V,116A,118I,120G,148V,169F,178T,200N,203R,208G
JF704556	CAP268_4_18_Clone5	South Africa	20-Mar-2008	genomic DNA	subtype: C	1	231	27I,41T,71D,75D,83L,91V,116A,118I,120G,148V,169F,178T,200N,203R,208G
JF704557	CAP268_4_18_Clone6	South Africa	20-Mar-2008	genomic DNA	subtype: C	1	231	27I,41T,71D,75D,83L,91V,116A,118I,120G,148V,169F,178T,200N,203R,208G
JF704558	CAP268_4_18_Clone7	South Africa	20-Mar-2008	genomic DNA	subtype: C	1	231	27I,41T,71D,75D,83L,91V,116A,118I,120G,148V,169F,178T,200N,203R,208G
JF704559	CAP268_4_18_Clone8	South Africa	20-Mar-2008	genomic DNA	subtype: C	1	231	27I,41T,71D,75D,83L,91V,116A,118I,120G,148V,169F,178T,200N,203R,208G
JF704560	CAP268_4_22_Clone1	South Africa	10-Mar-2009	genomic DNA	subtype: C	1	231	27I,41T,71D,83L,91V,116A,118I,120A,148V,169F,178T,200N,203R,208G,210S
JF704569	CAP268_4_22_Clone10	South Africa	10-Mar-2009	genomic DNA	subtype: C	1	231	27I,41T,71D,75D,83L,91V,116A,118I,120A,148V,169F,178T,200N,203R,208G
JF704561	CAP268_4_22_Clone2	South Africa	10-Mar-2009	genomic DNA	subtype: C	1	231	27I,41T,71D,75D,83L,91V,116A,118I,120G,148V,169F,178T,200N,203R,208G
JF704562	CAP268_4_22_Clone3	South Africa	10-Mar-2009	genomic DNA	subtype: C	1	231	27I,41T,71D,75D,83L,91V,116A,118I,120G,148V,169F,178T,200N,203R,208G,210S
JF704564	CAP268_4_22_Clone4	South Africa	10-Mar-2009	genomic DNA	subtype: C	1	231	27I,41T,71D,75D,83L,91V,116A,118I,120A,148V,169F,178T,200N,203R,208G
JF704563	CAP268_4_22_Clone5	South Africa	10-Mar-2009	genomic DNA	subtype: C	1	231	27I,41T,71D,75D,83L,91V,116A,118I,120G,148V,169F,178T,200N,203R,208G
JF704565	CAP268_4_22_Clone6	South Africa	10-Mar-2009	genomic DNA	subtype: C	1	231	27I,41T,71D,75D,83L,91V,116A,118I,120G,148V,169F,178T,200N,203R,208G
JF704566	CAP268_4_22_Clone7	South Africa	10-Mar-2009	genomic DNA	subtype: C	1	231	27I,41T,71D,75D,83L,91V,116A,118I,120G,148V,169F,178T,200N,203R,208G,210S
JF704567	CAP268_4_22_Clone8	South Africa	10-Mar-2009	genomic DNA	subtype: C	1	231	27I,41T,71D,75D,83L,91V,116A,118I,120G,148V,169F,178T,200N,203R,208G
JF704568	CAP268_4_22_Clone9	South Africa	10-Mar-2009	genomic DNA	subtype: C	1	231	27I,41T,71D,75D,83L,91V,116A,118I,120A,148V,169F,178T,200N,203R,208G
JF704570	CAP270_2_00_Clone1	South Africa	10-Oct-2006	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
JF704571	CAP270_2_00_Clone2	South Africa	10-Oct-2006	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
JF704572	CAP270_2_00_Clone3	South Africa	10-Oct-2006	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116A,117G,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
JF704573	CAP270_2_00_Clone4	South Africa	10-Oct-2006	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
JF704575	CAP270_2_00_Clone5	South Africa	10-Oct-2006	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
JF704574	CAP270_2_00_Clone6	South Africa	10-Oct-2006	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,200A,203R,208G,225S
JF704576	CAP270_2_00_Clone7	South Africa	10-Oct-2006	genomic DNA	subtype: C	1	231	6L,27I,41T,71G,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
JF704577	CAP270_2_00_Clone8	South Africa	10-Oct-2006	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
JF704578	CAP270_2_00_Clone9	South Africa	10-Oct-2006	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
JF704579	CAP270_2_04_Clone1	South Africa	14-Nov-2006	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
JF704580	CAP270_2_04_Clone2	South Africa	14-Nov-2006	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
JF704581	CAP270_2_04_Clone3	South Africa	14-Nov-2006	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
JF704582	CAP270_2_04_Clone4	South Africa	14-Nov-2006	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
JF704583	CAP270_2_04_Clone5	South Africa	14-Nov-2006	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
JF704584	CAP270_2_04_Clone6	South Africa	14-Nov-2006	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
JF704585	CAP270_2_04_Clone7	South Africa	14-Nov-2006	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
JF704586	CAP270_3_09_Clone1	South Africa	08-Mar-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
JF704587	CAP270_3_09_Clone2	South Africa	08-Mar-2007	genomic DNA	subtype: C	1	231	6P,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
JF704589	CAP270_3_09_Clone3	South Africa	08-Mar-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
JF704590	CAP270_3_09_Clone4	South Africa	08-Mar-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
JF704591	CAP270_3_09_Clone5	South Africa	08-Mar-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
JF704592	CAP270_3_09_Clone6	South Africa	08-Mar-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
JF704593	CAP270_3_09_Clone7	South Africa	08-Mar-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
JF704594	CAP270_3_09_Clone8	South Africa	08-Mar-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,111P,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
JF704588	CAP270_3_09_Clone9	South Africa	08-Mar-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
JF704595	CAP270_3_16_Clone1	South Africa	26-Sep-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
JF704604	CAP270_3_16_Clone10	South Africa	26-Sep-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
JF704605	CAP270_3_16_Clone11	South Africa	26-Sep-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,197A,203R,208G,225S
JF704606	CAP270_3_16_Clone12	South Africa	26-Sep-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
JF704607	CAP270_3_16_Clone13	South Africa	26-Sep-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
JF704608	CAP270_3_16_Clone14	South Africa	26-Sep-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
JF704609	CAP270_3_16_Clone15	South Africa	26-Sep-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
JF704610	CAP270_3_16_Clone16	South Africa	26-Sep-2007	genomic DNA	subtype: C	1	231	6L,27I,30R,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
JF704611	CAP270_3_16_Clone17	South Africa	26-Sep-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
JF704612	CAP270_3_16_Clone18	South Africa	26-Sep-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
JF704613	CAP270_3_16_Clone19	South Africa	26-Sep-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
JF704596	CAP270_3_16_Clone2	South Africa	26-Sep-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,168S,169F,177S,178T,187D,203R,208G,225S
JF704614	CAP270_3_16_Clone20	South Africa	26-Sep-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
JF704615	CAP270_3_16_Clone21	South Africa	26-Sep-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
JF704616	CAP270_3_16_Clone22	South Africa	26-Sep-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,64V,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
JF704617	CAP270_3_16_Clone23	South Africa	26-Sep-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
JF704618	CAP270_3_16_Clone24	South Africa	26-Sep-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
JF704619	CAP270_3_16_Clone25	South Africa	26-Sep-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
JF704620	CAP270_3_16_Clone26	South Africa	26-Sep-2007	genomic DNA	subtype: C	1	231	6L,27I,29G,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
JF704621	CAP270_3_16_Clone27	South Africa	26-Sep-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
JF704622	CAP270_3_16_Clone28	South Africa	26-Sep-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
JF704623	CAP270_3_16_Clone29	South Africa	26-Sep-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
JF704597	CAP270_3_16_Clone3	South Africa	26-Sep-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
JF704598	CAP270_3_16_Clone4	South Africa	26-Sep-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
JF704599	CAP270_3_16_Clone5	South Africa	26-Sep-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
JF704600	CAP270_3_16_Clone6	South Africa	26-Sep-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
JF704601	CAP270_3_16_Clone7	South Africa	26-Sep-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
JF704602	CAP270_3_16_Clone8	South Africa	26-Sep-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
JF704603	CAP270_3_16_Clone9	South Africa	26-Sep-2007	genomic DNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G,225S
JF704624	CAP274_2_00_Clone1	South Africa	30-Nov-2006	genomic DNA	subtype: C	1	231	6F,15L,27I,31G,33N,41T,71D,83L,91V,110N,115V,116Q,120G,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JF704625	CAP274_2_00_Clone2	South Africa	30-Nov-2006	genomic DNA	subtype: C	1	231	6F,15L,27I,31G,33N,41T,71D,83L,91V,110N,115V,116Q,120G,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JF704626	CAP274_2_00_Clone3	South Africa	30-Nov-2006	genomic DNA	subtype: C	1	231	6F,15L,27I,31G,33N,41T,71D,83L,91V,110N,115V,116Q,120G,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JF704627	CAP274_2_00_Clone4	South Africa	30-Nov-2006	genomic DNA	subtype: C	1	231	6F,15L,27I,31G,33N,41T,71D,83L,91V,110N,115V,116Q,120G,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JF704628	CAP274_2_00_Clone5	South Africa	30-Nov-2006	genomic DNA	subtype: C	1	231	6F,15L,27I,31G,33N,41T,71D,83L,91V,112H,115V,116Q,120G,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JF704629	CAP274_2_00_Clone6	South Africa	30-Nov-2006	genomic DNA	subtype: C	1	231	6F,15L,27I,31G,33N,41T,71D,83L,91V,110N,115V,116Q,120G,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JF704630	CAP274_2_00_Clone7	South Africa	30-Nov-2006	genomic DNA	subtype: C	1	231	6F,15L,27I,31G,33N,41T,71D,83L,91V,110N,115V,116Q,119A,120G,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JF704631	CAP274_2_00_Clone8	South Africa	30-Nov-2006	genomic DNA	subtype: C	1	231	6F,15L,27I,31G,33N,41T,71D,83L,91V,112H,115V,116Q,120G,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JF704632	CAP274_2_00_Clone9	South Africa	30-Nov-2006	genomic DNA	subtype: C	1	231	6F,15L,27I,31G,33N,41T,71D,83L,91V,110N,115V,116Q,120G,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
JF704633	CAP274_2_07_Clone1	South Africa	21-Feb-2007	genomic DNA	subtype: C	1	231	6L,15L,27I,31G,33N,41T,57D,71D,91V,110N,115V,116Q,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
JF704634	CAP274_2_07_Clone2	South Africa	21-Feb-2007	genomic DNA	subtype: C	1	231	6L,15L,27I,31G,33N,41T,57D,71D,91V,110N,115V,116Q,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
JF704635	CAP274_2_07_Clone3	South Africa	21-Feb-2007	genomic DNA	subtype: C	1	231	6L,15L,27I,31G,33N,41T,71D,91V,110N,115V,116Q,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
JF704636	CAP274_2_07_Clone4	South Africa	21-Feb-2007	genomic DNA	subtype: C	1	231	6L,15L,27I,31G,33N,41T,71D,91V,110N,115V,116Q,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
JF704637	CAP274_2_07_Clone5	South Africa	21-Feb-2007	genomic DNA	subtype: C	1	231	6L,15L,27I,31G,33N,41T,71D,91V,110N,115V,116Q,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
JF704638	CAP274_2_07_Clone6	South Africa	21-Feb-2007	genomic DNA	subtype: C	1	231	6L,15L,27I,31G,33N,41T,71D,91V,110N,115V,116Q,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
JF704639	CAP274_2_07_Clone7	South Africa	21-Feb-2007	genomic DNA	subtype: C	1	231	6L,15L,27I,31G,33N,41T,71D,91V,110N,115V,116Q,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
JF704640	CAP274_3_16_Clone1	South Africa	15-Nov-2007	genomic DNA	subtype: C	1	231	6L,15L,27I,31G,33N,41T,71D,91V,110N,115V,116Q,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
JF704649	CAP274_3_16_Clone10	South Africa	15-Nov-2007	genomic DNA	subtype: C	1	231	6L,15L,27I,31G,33N,41T,71D,91V,110N,115V,116Q,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
JF704650	CAP274_3_16_Clone11	South Africa	15-Nov-2007	genomic DNA	subtype: C	1	231	6L,15L,27I,31G,33N,41T,71D,91V,110N,115V,116Q,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
JF704651	CAP274_3_16_Clone12	South Africa	15-Nov-2007	genomic DNA	subtype: C	1	231	6L,15L,27I,31G,33N,41T,71D,91V,110N,115V,116Q,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
JF704652	CAP274_3_16_Clone13	South Africa	15-Nov-2007	genomic DNA	subtype: C	1	231	6L,15L,27I,31G,33N,41T,71D,91V,110N,115V,116Q,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
JF704653	CAP274_3_16_Clone14	South Africa	15-Nov-2007	genomic DNA	subtype: C	1	231	6L,15L,27I,31G,33N,41T,71D,91V,110N,115V,116Q,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
JF704654	CAP274_3_16_Clone15	South Africa	15-Nov-2007	genomic DNA	subtype: C	1	231	6L,15L,27I,31G,33N,41T,71D,91V,110N,115V,116Q,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
JF704655	CAP274_3_16_Clone16	South Africa	15-Nov-2007	genomic DNA	subtype: C	1	231	6L,15L,27I,31G,33N,41T,71D,91V,110N,115V,116Q,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
JF704656	CAP274_3_16_Clone17	South Africa	15-Nov-2007	genomic DNA	subtype: C	1	231	6L,15L,27I,31G,33N,41T,71D,91V,110N,115V,116Q,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
JF704657	CAP274_3_16_Clone18	South Africa	15-Nov-2007	genomic DNA	subtype: C	1	231	6L,15L,27I,31G,33N,41T,71D,91V,110N,115V,116Q,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
JF704658	CAP274_3_16_Clone19	South Africa	15-Nov-2007	genomic DNA	subtype: C	1	231	6L,15L,27I,31G,33N,41T,71D,72A,91V,110N,115V,116Q,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
JF704641	CAP274_3_16_Clone2	South Africa	15-Nov-2007	genomic DNA	subtype: C	1	231	6L,15L,27I,31G,33N,41T,71D,91V,110N,115V,116Q,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
JF704642	CAP274_3_16_Clone3	South Africa	15-Nov-2007	genomic DNA	subtype: C	1	231	6L,15L,27I,31G,33N,41T,71D,91V,110N,115V,116Q,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
JF704643	CAP274_3_16_Clone4	South Africa	15-Nov-2007	genomic DNA	subtype: C	1	231	6L,15L,27I,31G,33N,41T,71D,91V,110N,115V,116Q,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
JF704644	CAP274_3_16_Clone5	South Africa	15-Nov-2007	genomic DNA	subtype: C	1	231	6L,15L,27I,31G,33N,41T,71D,91V,110N,115V,116Q,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
JF704645	CAP274_3_16_Clone6	South Africa	15-Nov-2007	genomic DNA	subtype: C	1	231	6L,15L,27I,31G,33N,41T,71D,91V,110N,115V,116Q,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
JF704646	CAP274_3_16_Clone7	South Africa	15-Nov-2007	genomic DNA	subtype: C	1	231	6L,15L,27I,31G,33N,41T,71D,91V,110N,115V,116Q,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
JF704647	CAP274_3_16_Clone8	South Africa	15-Nov-2007	genomic DNA	subtype: C	1	231	6L,15L,27I,29G,31G,33N,41T,71D,91V,110N,115V,116Q,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
JF704648	CAP274_3_16_Clone9	South Africa	15-Nov-2007	genomic DNA	subtype: C	1	231	6L,15L,27I,31G,33N,41T,71D,91V,110N,115V,116Q,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G

Genbank References: capsid (p24)

Database

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