<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Patro (2020) Combined HIV-1 sequence and integration site analysis informs viral dynamics and allows reconstruction of replicating viral ancestors Proc. Natl. Acad. Sci. U.S.A. 116 (51), 25891-2589 1.83e-159 12          

Download sequences

AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
MN691959ACH2-NFLMDA13_B1USA01-Jan-2018genomic DNAsubtype: B123110V,122LP,123PS,124FI
MN691961PID1683.PBMC-M18-03-WIPF1-F1F4USA09-May-2016genomic DNAsubtype: B12316L,27I,83L,87P,91V,96I,98D,116T,120S,148V,180D
MN691962PID1683.PBMC-M20-04-XPO6-F14-SUSA09-May-2016genomic DNAsubtype: B12316L,27I,83L,87P,91V,96I,98D,116T,120S,148V,180D
MN691964PID2669.PBMC-CYLD-ch16USA14-Mar-2016genomic DNAsubtype: B12316M,14P,83L,120H,128D,154K,171V,178T,207S
MN691967PID2669.PBMC-TMCO5A-ch15USA14-Mar-2016genomic DNAsubtype: B12316M,14P,83L,120H,128D,154K,171V,178T
MN691968PID2669.PBMC-VPS13D-ch1USA14-Mar-2016genomic DNAsubtype: B12316M,14P,79D,83L,154K,171I
MN692074PID3162.PBMC-TNFSF8USA19-Dec-2017genomic DNAsubtype: B123183L,136M
MN692144Pt1-M26-11-RAPH1USA09-Dec-2011genomic DNAsubtype: B12316L,27I,160S,194S,208G
MN692145Pt1-M26-13-AMBI-SangUSA09-Dec-2011genomic DNAsubtype: B12316L,27I,160S,194S,208G
MN692146Pt1-M26-NFL-104-PBioUSA09-Dec-2011genomic DNAsubtype: B12316L,27I,160S,194S,208G
MN692147Pt1-M26-NFL-30-PBioUSA09-Dec-2011genomic DNAsubtype: B12316L,27I,160S,194S,208G
MN692189R09-ABCA11PUSA08-Oct-2015genomic DNAsubtype: B12316L,83L,91V,136M,194S,208G

Database

Resources

Team