<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Musyoki (2012) Genetic Characterization of HIV Before Widespread Testing of HIV Vaccine Candidates at a Clinical Trial Site in Pretoria, South Africa AIDS Res. Hum. Retroviruses 28 (9), 931-938 (2012) 4.53e-150 39 39 Naive Plasma Direct PCR Molecular epidemiology

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AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
JN167463ZA.2008.DGM.10gSouth Africa: DGM ho2007genomic DNAsubtype: C2023127I,41T,71D,83M,116N,120A,124V,148V,154K,169F,178T,180D,187D,200L,203R,204G,208G,225S
JN167464ZA.2008.DGM.11gSouth Africa: DGM ho2007genomic DNAsubtype: C2023127I,41T,71D,83T,91V,110N,116A,120A,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G,211I,225S
JN167465ZA.2008.DGM.12gSouth Africa: DGM ho2007genomic DNAsubtype: C2023127I,31N,41T,71D,75D,83L,91V,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
JN167466ZA.2008.DGM.13gSouth Africa: DGM ho2007genomic DNAsubtype: C2023128V,41T,71D,83M,87Q,91V,96I,116T,120S,148V,154K,169F,177S,178T,187D,203R,208G,210S
JN167467ZA.2008.DGM.14gSouth Africa: DGM ho2007genomic DNAsubtype: C2023127I,41T,71D,116A,120S,124V,148V,169F,178T,180D,187D,203R,208G,225S
JN167468ZA.2008.DGM.15gSouth Africa: DGM ho2007genomic DNAsubtype: C2023127I,41T,71D,83M,91V,110N,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G,210S
JN167469ZA.2008.DGM.16gSouth Africa: DGM ho2007genomic DNAsubtype: C2023127I,41T,71D,83L,86I,91V,116A,120S,124V,128D,136M,148V,169F,178T,187D,203R,208G,225S
JN167470ZA.2008.DGM.17gSouth Africa: DGM ho2007genomic DNAsubtype: C2023127I,41T,71D,83L,116A,120S,128D,148V,169F,178T,187D,188S,203R,208G
JN167471ZA.2008.DGM.18gSouth Africa: DGM ho2007genomic DNAsubtype: C2023127I,71D,83L,86A,87Q,91V,92Q,96L,98D,116A,120H,128D,148V,154K,169F,177S,187D,191I,207S,208G
JN167472ZA.2008.DGM.19gSouth Africa: DGM ho2007genomic DNAsubtype: C2023127I,31N,41T,71D,83L,86I,91V,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
JN167454ZA.2008.DGM.1gSouth Africa: DGM ho2007genomic DNAsubtype: C2023141T,50H,56F,71D,83L,87Q,91H,92P,93A,96L,116A,120S,128D,148V,154K,169F,178T,180D,187D,200I,204G,208G
JN167473ZA.2008.DGM.20gSouth Africa: DGM ho2007genomic DNAsubtype: C2023127I,71D,78V,83L,116A,120S,128D,148V,169F,178T,187D,208G
JN167474ZA.2008.DGM.21gSouth Africa: DGM ho2007genomic DNAsubtype: C2023127I,29K,41T,71D,83T,116A,120S,128D,148V,169F,178T,180D,203R,208G,210S,225S
JN167475ZA.2008.DGM.22gSouth Africa: DGM ho2007genomic DNAsubtype: C2023127I,31N,41T,71D,83T,91V,116A,120S,128D,148V,154K,160S,169F,178T,180D,187D,199R,200N,203R,208G,225S,230I
JN167476ZA.2008.DGM.23gSouth Africa: DGM ho2007genomic DNAsubtype: C2023127I,36I,41T,71D,83L,91V,110N,116A,120S,128D,148V,154K,169F,171V,180D,187D,191I,207S,208G,225S
JN167477ZA.2008.DGM.24gSouth Africa: DGM ho2007genomic DNAsubtype: C2023136I,41T,71D,72A,83T,87P,91V,96I,98D,116T,124V,148V,154K,169F,178T,180D,187D,203R,208G,225S
JN167478ZA.2008.DGM.25gSouth Africa: DGM ho2007genomic DNAsubtype: C2023127I,31N,41T,71D,83L,86I,91V,115V,116A,120A,128D,148V,154K,169F,171C,178T,187D,203R,208G,210S,225S
JN167479ZA.2008.DGM.26gSouth Africa: DGM ho2007genomic DNAsubtype: C2023136I,41T,71D,72A,83T,87P,91V,96I,98D,116T,124V,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
JN167480ZA.2008.DGM.27gSouth Africa: DGM ho2007genomic DNAsubtype: C2023141T,71D,83T,91V,107S,112A,116A,120S,124V,148V,169F,171A,178T,180D,187D,204S,208G,225S
JN167481ZA.2008.DGM.28gSouth Africa: DGM ho2007genomic DNAsubtype: C2023127I,36I,41T,71D,83L,87Q,91V,96I,98D,116A,128D,148V,154K,169F,178T,187D,203R,208G
JN167482ZA.2008.DGM.29gSouth Africa: DGM ho2007genomic DNAsubtype: C2023127I,41T,50L,68I,71D,83L,96I,116T,120S,128D,148V,169F,178T,180D,187D,200I,204G,208G,210S
JN167455ZA.2008.DGM.2gSouth Africa: DGM ho2007genomic DNAsubtype: C2023127I,41T,68I,71D,83L,91V,116A,120S,128D,135V,148V,169F,178T,180D,187D,208G,225S
JN167483ZA.2008.DGM.30gSouth Africa: DGM ho2007genomic DNAsubtype: C2023127I,36I,41T,71D,83L,91V,110N,116A,120S,128D,148V,154K,169F,171C,178T,180D,203R,210S,225S
JN167484ZA.2008.DGM.31gSouth Africa: DGM ho2007genomic DNAsubtype: C2023127I,41T,83L,110N,116A,120S,128D,148V,154K,169F,171C,178T,180D,203R,208G,225S
JN167485ZA.2008.DGM.33gSouth Africa: DGM ho2007genomic DNAsubtype: C2023141T,50G,55H,56V,83L,91V,96L,116A,120A,128D,148V,154K,169F,178T,180D,187D,199R,200L,204G,208G,210S,225S
JN167486ZA.2008.DGM.34gSouth Africa: DGM ho2007genomic DNAsubtype: C2023127I,41T,71D,112A,116A,120A,124V,128D,148V,169F,178T,180D,203R,208G,225S
JN167487ZA.2008.DGM.35gSouth Africa: DGM ho2007genomic DNAsubtype: C2023127I,41T,71D,72A,83L,91V,116A,120S,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G,210S,230I
JN167488ZA.2008.DGM.36gSouth Africa: DGM ho2007genomic DNAsubtype: C2023127I,31N,41T,71D,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
JN167489ZA.2008.DGM.37gSouth Africa: DGM ho2007genomic DNAsubtype: C2023127I,31D,41T,71D,83L,86I,91V,116A,120G,128D,148V,154K,160S,169F,178T,180D,187D,203R,208G,225S
JN167490ZA.2008.DGM.38gSouth Africa: DGM ho2007genomic DNAsubtype: C2023127I,31D,41T,71D,83M,110N,116A,120G,128D,148V,154K,169F,178T,180D,187D,191I,203R,208G,210S,225S
JN167491ZA.2008.DGM.39gSouth Africa: DGM ho2007genomic DNAsubtype: C2023127I,41T,71D,83L,91V,110N,116A,120S,128D,148V,154K,169F,171V,178T,180D,203R,210S,225S
JN167456ZA.2008.DGM.3gSouth Africa: DGM ho2007genomic DNAsubtype: C2023127I,41T,71D,83L,116A,128D,136M,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
JN167492ZA.2008.DGM.40gSouth Africa: DGM ho2007genomic DNAsubtype: C2023127I,41T,71D,91V,116A,120S,124V,148V,169F,178T,180D,187D,203R,208G
JN167457ZA.2008.DGM.4gSouth Africa: DGM ho2007genomic DNAsubtype: C2023127I,41T,71D,83M,116A,120S,124V,148V,169F,178T,180D,187D,208G
JN167458ZA.2008.DGM.5gSouth Africa: DGM ho2007genomic DNAsubtype: C2023127I,31N,41T,71D,83L,91V,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
JN167459ZA.2008.DGM.6gSouth Africa: DGM ho2007genomic DNAsubtype: C2023127I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,203R,207A,208G
JN167460ZA.2008.DGM.7gSouth Africa: DGM ho2007genomic DNAsubtype: C2023124G,26S,27I,31N,41T,71D,83L,86I,91V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S
JN167461ZA.2008.DGM.8gSouth Africa: DGM ho2007genomic DNAsubtype: C2023127I,41T,71D,83L,91V,116T,120S,124V,128D,148V,169F,178T,180D,203R,208G
JN167462ZA.2008.DGM.9gSouth Africa: DGM ho2007genomic DNAsubtype: C2023141T,54S,58A,71D,78V,83T,91V,116A,120S,135V,148V,154K,169F,177S,187D,208G,225S

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