Genbank References: capsid (p24)

Authors	Title	Citation	E-value	# in Gb	#Pts	ART	Source	Cloning	StudyType
Mendoza (2020)	Antigen responsive CD4+ T cell clones contribute to the HIV-1 latent reservoir	J. Exp. Med. (2020) In press	1.26e-168	1830	8	ART	PBMC	SGS	Reservoir

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Accession	IsolateName	Country	Coll Date	Clone	MolType	Source	Note	FirstAA	LastAA	MutList
MT189275	5104_CEFT_AIMPl2_F11	USA	2016/2018		genomic DNA	PBMC	5104_CEFT_AIMPl2_F11HIV-1 isolate from USAquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,14P,15L,41T,80*,83L,87Q,96I,110N,116A,148V,178T,200N
MT190783	5104_CEFT_CD69_A8	USA	2016/2018		genomic DNA	PBMC	5104_CEFT_CD69_A8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190781	5104_CEFT_CD69_M4	USA	2016/2018		genomic DNA	PBMC	5104_CEFT_CD69_M4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,14P,15L,41T,83L,91V,110N,116A,148V,178T,200S
MT190784	5104_CEFT_CD69_O18	USA	2016/2018		genomic DNA	PBMC	5104_CEFT_CD69_O18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT189276	5104_CEFT_CD69_O22	USA	2016/2018		genomic DNA	PBMC	5104_CEFT_CD69_O22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S,225S
MT190779	5104_CEFT_NEG_A19	USA	2016/2018		genomic DNA	PBMC	5104_CEFT_NEG_A19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190782	5104_CEFT_NEG_A8	USA	2016/2018		genomic DNA	PBMC	5104_CEFT_NEG_A8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190787	5104_CEFT_NEG_B20	USA	2016/2018		genomic DNA	PBMC	5104_CEFT_NEG_B20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190788	5104_CEFT_NEG_D11	USA	2016/2018		genomic DNA	PBMC	5104_CEFT_NEG_D11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190791	5104_CEFT_NEG_E16	USA	2016/2018		genomic DNA	PBMC	5104_CEFT_NEG_E16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190793	5104_CEFT_NEG_F8	USA	2016/2018		genomic DNA	PBMC	5104_CEFT_NEG_F8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT189278	5104_CEFT_NEG_K6	USA	2016/2018		genomic DNA	PBMC	5104_CEFT_NEG_K6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200N
MT190794	5104_CEFT_NEG_N3	USA	2016/2018		genomic DNA	PBMC	5104_CEFT_NEG_N3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190796	5104_CEFT_NEG_N6	USA	2016/2018		genomic DNA	PBMC	5104_CEFT_NEG_N6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT189281	5104_CMV_AIM_D16	USA	2016/2018		genomic DNA	PBMC	5104_CMV_AIM_D16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT189285	5104_CMV_AIM_E11	USA	2016/2018		genomic DNA	PBMC	5104_CMV_AIM_E11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6V,14P,15L,41T,83L,86A,87Q,96I,110N,116A,148V,178T,200S
MT189286	5104_CMV_AIM_O19	USA	2016/2018		genomic DNA	PBMC	5104_CMV_AIM_O19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6V,14P,15L,41T,83L,87Q,96I,110N,116A,120H,148V,178T,200S
MT189323	5104_CMV_AIMPl2_F13	USA	2016/2018		genomic DNA	PBMC	5104_CMV_AIMPl2_F13HIV-1 isolate from USAquadruplex qPCR(Q4PCR) sequenced genome (non_functional)	1	231	6V,14P,15L,23*,41T,80*,83L,110N,116A,148V,178T,184*,200S,229K
MT189289	5104_CMV_AIMPl2_F23	USA	2016/2018		genomic DNA	PBMC	5104_CMV_AIMPl2_F23HIV-1 isolate from USAquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190799	5104_CMV_AIMPl2_L20	USA	2016/2018		genomic DNA	PBMC	5104_CMV_AIMPl2_L20HIV-1 isolate from USAquadruplex qPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT189324	5104_CMV_CD69_A22	USA	2016/2018		genomic DNA	PBMC	5104_CMV_CD69_A22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6L,14P,15L,23*,80*,82K,83L,97K,100K,110N,116A,117*,173K,178T,184*,222K
MT190801	5104_CMV_CD69_B6	USA	2016/2018		genomic DNA	PBMC	5104_CMV_CD69_B6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190803	5104_CMV_CD69_C4	USA	2016/2018		genomic DNA	PBMC	5104_CMV_CD69_C4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190804	5104_CMV_CD69_J23	USA	2016/2018		genomic DNA	PBMC	5104_CMV_CD69_J23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT189290	5104_CMV_CD69_K17	USA	2016/2018		genomic DNA	PBMC	5104_CMV_CD69_K17HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190807	5104_CMV_CD69_M1	USA	2016/2018		genomic DNA	PBMC	5104_CMV_CD69_M1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190809	5104_CMV_CD69_M2	USA	2016/2018		genomic DNA	PBMC	5104_CMV_CD69_M2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190811	5104_CMV_NEG_E7	USA	2016/2018		genomic DNA	PBMC	5104_CMV_NEG_E7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190812	5104_CMV_NEG_F19	USA	2016/2018		genomic DNA	PBMC	5104_CMV_NEG_F19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT189325	5104_CMV_NEG_F21	USA	2016/2018		genomic DNA	PBMC	5104_CMV_NEG_F21HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT189291	5104_CMV_NEG_G1	USA	2016/2018		genomic DNA	PBMC	5104_CMV_NEG_G1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6V,14P,15L,41T,83L,86A,87Q,96I,110N,116A,148V,178T,200S
MT190815	5104_CMV_NEG_H17	USA	2016/2018		genomic DNA	PBMC	5104_CMV_NEG_H17HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190817	5104_CMV_NEG_K17	USA	2016/2018		genomic DNA	PBMC	5104_CMV_NEG_K17HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190819	5104_CMV_NEG_L2	USA	2016/2018		genomic DNA	PBMC	5104_CMV_NEG_L2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190821	5104_CMV_NEG_M15	USA	2016/2018		genomic DNA	PBMC	5104_CMV_NEG_M15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190823	5104_GAG_AIM_B12	USA	2016/2018		genomic DNA	PBMC	5104_GAG_AIM_B12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT189292	5104_GAG_AIM_D2	USA	2016/2018		genomic DNA	PBMC	5104_GAG_AIM_D2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190824	5104_GAG_AIM_G2	USA	2016/2018		genomic DNA	PBMC	5104_GAG_AIM_G2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,14P,15L,41T,83L,87Q,96I,110N,116A,148V,178T,200N
MT189293	5104_GAG_AIM_H23	USA	2016/2018		genomic DNA	PBMC	5104_GAG_AIM_H23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT189295	5104_GAG_AIM_P2	USA	2016/2018		genomic DNA	PBMC	5104_GAG_AIM_P2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT189294	5104_GAG_AIMPl2_B20	USA	2016/2018		genomic DNA	PBMC	5104_GAG_AIMPl2_B20HIV-1 isolate from USAquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6V,14P,15L,23*,41T,46R,80*,83L,86A,87Q,96I,100K,110N,116A,117*,148V,167Q,178T,200S,222E
MT189296	5104_GAG_AIMPl2_E7	USA	2016/2018		genomic DNA	PBMC	5104_GAG_AIMPl2_E7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6V,14P,15L,23*,41T,55I,80*,81N,82K,83L,100K,110N,116A,133*,148V,156R,167Q,173K,178T,184*,200S,206R,214I,220R,222R,223R
MT190827	5104_GAG_AIMPl2_J3	USA	2016/2018		genomic DNA	PBMC	5104_GAG_AIMPl2_J3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190829	5104_GAG_CD69_B7	USA	2016/2018		genomic DNA	PBMC	5104_GAG_CD69_B7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT189336	5104_GAG_CD69_C3	USA	2016/2018		genomic DNA	PBMC	5104_GAG_CD69_C3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6L,14P,15L,31S,44A,83L,87Q,110N,116A,148V,178T,200S
MT189316	5104_GAG_CD69_F10	USA	2016/2018		genomic DNA	PBMC	5104_GAG_CD69_F10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (msd_mutation)	1	231	6L,14P,15L,31S,44A,83L,87Q,96I,110N,116A,120H,148V,178T,200S
MT189337	5104_GAG_CD69_G2	USA	2016/2018		genomic DNA	PBMC	5104_GAG_CD69_G2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190831	5104_GAG_CD69_O6	USA	2016/2018		genomic DNA	PBMC	5104_GAG_CD69_O6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190833	5104_GAG_CD69_O8	USA	2016/2018		genomic DNA	PBMC	5104_GAG_CD69_O8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190835	5104_GAG_NEG_A12	USA	2016/2018		genomic DNA	PBMC	5104_GAG_NEG_A12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190837	5104_GAG_NEG_C22	USA	2016/2018		genomic DNA	PBMC	5104_GAG_NEG_C22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190838	5104_GAG_NEG_D23	USA	2016/2018		genomic DNA	PBMC	5104_GAG_NEG_D23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190841	5104_GAG_NEG_E14	USA	2016/2018		genomic DNA	PBMC	5104_GAG_NEG_E14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT189299	5104_GAG_NEG_E20	USA	2016/2018		genomic DNA	PBMC	5104_GAG_NEG_E20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,14P,15L,41T,83L,87Q,96I,110N,116A,148V,178T,200S
MT189301	5104_GAG_NEG_F16	USA	2016/2018		genomic DNA	PBMC	5104_GAG_NEG_F16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6V,14P,15L,41T,83L,86A,87Q,96I,110N,116A,148V,178T,200S
MT190843	5104_GAG_NEG_H7	USA	2016/2018		genomic DNA	PBMC	5104_GAG_NEG_H7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190845	5104_GAG_NEG_J23	USA	2016/2018		genomic DNA	PBMC	5104_GAG_NEG_J23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190778	5104_GAG_NEG_K14	USA	2016/2018		genomic DNA	PBMC	5104_GAG_NEG_K14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190776	5104_GAG_NEG_K22	USA	2016/2018		genomic DNA	PBMC	5104_GAG_NEG_K22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190785	5104_GAG_NEG_K24	USA	2016/2018		genomic DNA	PBMC	5104_GAG_NEG_K24HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT189298	5104_GAG_NEG_N15	USA	2016/2018		genomic DNA	PBMC	5104_GAG_NEG_N15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190780	5104_GAG_NEG_N8	USA	2016/2018		genomic DNA	PBMC	5104_GAG_NEG_N8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190777	5104_GAG_NEG_O20	USA	2016/2018		genomic DNA	PBMC	5104_GAG_NEG_O20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190790	5104_MOGPl1_A1	USA	2016/2018		genomic DNA	PBMC	5104_MOGPl1_A1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190786	5104_MOGPl1_B11	USA	2016/2018		genomic DNA	PBMC	5104_MOGPl1_B11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190789	5104_MOGPl1_B6	USA	2016/2018		genomic DNA	PBMC	5104_MOGPl1_B6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190792	5104_MOGPl1_D4	USA	2016/2018		genomic DNA	PBMC	5104_MOGPl1_D4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190795	5104_MOGPl1_F3	USA	2016/2018		genomic DNA	PBMC	5104_MOGPl1_F3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,14P,15L,41T,83L,110N,116A,178T
MT190797	5104_MOGPl1_G14	USA	2016/2018		genomic DNA	PBMC	5104_MOGPl1_G14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190798	5104_MOGPl1_G4	USA	2016/2018		genomic DNA	PBMC	5104_MOGPl1_G4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190846	5104_MOGPl1_I12	USA	2016/2018		genomic DNA	PBMC	5104_MOGPl1_I12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190848	5104_MOGPl1_I5	USA	2016/2018		genomic DNA	PBMC	5104_MOGPl1_I5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190850	5104_MOGPl1_I6	USA	2016/2018		genomic DNA	PBMC	5104_MOGPl1_I6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190854	5104_MOGPl1_J22	USA	2016/2018		genomic DNA	PBMC	5104_MOGPl1_J22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190802	5104_MOGPl1_K18	USA	2016/2018		genomic DNA	PBMC	5104_MOGPl1_K18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190800	5104_MOGPl1_O13	USA	2016/2018		genomic DNA	PBMC	5104_MOGPl1_O13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190805	5104_MOGPl2_C4	USA	2016/2018		genomic DNA	PBMC	5104_MOGPl2_C4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190806	5104_MOGPl2_D24	USA	2016/2018		genomic DNA	PBMC	5104_MOGPl2_D24HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190808	5104_MOGPl2_E10	USA	2016/2018		genomic DNA	PBMC	5104_MOGPl2_E10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190810	5104_MOGPl2_E22	USA	2016/2018		genomic DNA	PBMC	5104_MOGPl2_E22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190813	5104_MOGPl2_K3	USA	2016/2018		genomic DNA	PBMC	5104_MOGPl2_K3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190814	5104_MOGPl2_M7	USA	2016/2018		genomic DNA	PBMC	5104_MOGPl2_M7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190816	5104_MOGPl2_O9	USA	2016/2018		genomic DNA	PBMC	5104_MOGPl2_O9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190820	5104_MOGPl2_P2	USA	2016/2018		genomic DNA	PBMC	5104_MOGPl2_P2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190818	5104_MOGPl2_P24	USA	2016/2018		genomic DNA	PBMC	5104_MOGPl2_P24HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190822	5104_SEB_AIM_A22	USA	2016/2018		genomic DNA	PBMC	5104_SEB_AIM_A22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190826	5104_SEB_AIM_E12	USA	2016/2018		genomic DNA	PBMC	5104_SEB_AIM_E12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190825	5104_SEB_AIM_E15	USA	2016/2018		genomic DNA	PBMC	5104_SEB_AIM_E15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190828	5104_SEB_AIM_E19	USA	2016/2018		genomic DNA	PBMC	5104_SEB_AIM_E19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190830	5104_SEB_AIM_E20	USA	2016/2018		genomic DNA	PBMC	5104_SEB_AIM_E20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190832	5104_SEB_AIM_E3	USA	2016/2018		genomic DNA	PBMC	5104_SEB_AIM_E3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190834	5104_SEB_AIM_F20	USA	2016/2018		genomic DNA	PBMC	5104_SEB_AIM_F20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,14P,15L,41T,83L,87Q,96I,110N,116A,148V,178T,200N
MT190836	5104_SEB_AIM_L4	USA	2016/2018		genomic DNA	PBMC	5104_SEB_AIM_L4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT189297	5104_SEB_AIM_M14	USA	2016/2018		genomic DNA	PBMC	5104_SEB_AIM_M14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT189300	5104_SEB_AIM_N8	USA	2016/2018		genomic DNA	PBMC	5104_SEB_AIM_N8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	205	6L,14P,15L,41T,83L,87Q,96I,110N,116A,127R,148V,178T,180K,200N,205F
MT189302	5104_SEB_AIM_P1	USA	2016/2018		genomic DNA	PBMC	5104_SEB_AIM_P1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,14P,15L,31S,44A,83L,110N,116A,148V,178T,187K,200S
MT190839	5104_SEB_AIMPl2_C24	USA	2016/2018		genomic DNA	PBMC	5104_SEB_AIMPl2_C24HIV-1 isolate from USAquadruplex qPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT189303	5104_SEB_AIMPl2_E6	USA	2016/2018		genomic DNA	PBMC	5104_SEB_AIMPl2_E6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6V,14P,15L,41T,83L,87Q,110N,116A,148V,178T,200S
MT190840	5104_SEB_AIMPl2_H6	USA	2016/2018		genomic DNA	PBMC	5104_SEB_AIMPl2_H6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190842	5104_SEB_AIMPl2_M11	USA	2016/2018		genomic DNA	PBMC	5104_SEB_AIMPl2_M11HIV-1 isolate from USAquadruplex qPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT189305	5104_SEB_AIMPl2_N16	USA	2016/2018		genomic DNA	PBMC	5104_SEB_AIMPl2_N16HIV-1 isolate from USAquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,14P,15L,21T,83L,110N,116A,178T
MT189317	5104_SEB_AIMPl2_O1	USA	2016/2018		genomic DNA	PBMC	5104_SEB_AIMPl2_O1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (msd_mutation)	1	231	6L,14P,15L,31S,44A,83L,87Q,96I,110N,116A,120H,148V,178T,200S
MT190844	5104_SEB_AIMPl2_P2	USA	2016/2018		genomic DNA	PBMC	5104_SEB_AIMPl2_P2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190847	5104_SEB_CD69Pl1_B15	USA	2016/2018		genomic DNA	PBMC	5104_SEB_CD69Pl1_B15HIV-1 isolate from USAquadruplex qPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT189304	5104_SEB_CD69Pl1_D17	USA	2016/2018		genomic DNA	PBMC	5104_SEB_CD69Pl1_D17HIV-1 isolate from USAquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6V,14P,15L,41T,83L,86A,87Q,96I,110N,116A,148V,178T,200S
MT190849	5104_SEB_CD69Pl1_E23	USA	2016/2018		genomic DNA	PBMC	5104_SEB_CD69Pl1_E23HIV-1 isolate from USAquadruplex qPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190851	5104_SEB_CD69Pl1_J11	USA	2016/2018		genomic DNA	PBMC	5104_SEB_CD69Pl1_J11HIV-1 isolate from USAquadruplex qPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190852	5104_SEB_CD69Pl2_E7	USA	2016/2018		genomic DNA	PBMC	5104_SEB_CD69Pl2_E7HIV-1 isolate from USAquadruplex qPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190853	5104_SEB_CD69Pl2_H24	USA	2016/2018		genomic DNA	PBMC	5104_SEB_CD69Pl2_H24HIV-1 isolate from USAquadruplex qPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190855	5104_SEB_CD69Pl2_I17	USA	2016/2018		genomic DNA	PBMC	5104_SEB_CD69Pl2_I17HIV-1 isolate from USAquadruplex qPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190856	5104_SEB_CD69Pl2_I5	USA	2016/2018		genomic DNA	PBMC	5104_SEB_CD69Pl2_I5HIV-1 isolate from USAquadruplex qPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT189318	5104_SEB_CD69Pl2_K9	USA	2016/2018		genomic DNA	PBMC	5104_SEB_CD69Pl2_K9HIV-1 isolate from USAquadruplex qPCR(Q4PCR) sequenced genome (msd_mutation)	1	231	6L,14P,15L,31S,44A,83L,87Q,96I,110N,116A,120H,148V,178T,200S
MT190857	5104_SEB_NEGPl1_B20	USA	2016/2018		genomic DNA	PBMC	5104_SEB_NEGPl1_B20HIV-1 isolate from USAquadruplex qPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190858	5104_SEB_NEGPl1_F12	USA	2016/2018		genomic DNA	PBMC	5104_SEB_NEGPl1_F12HIV-1 isolate from USAquadruplex qPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190859	5104_SEB_NEGPl1_K11	USA	2016/2018		genomic DNA	PBMC	5104_SEB_NEGPl1_K11HIV-1 isolate from USAquadruplex qPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190860	5104_SEB_NEGPl1_K15	USA	2016/2018		genomic DNA	PBMC	5104_SEB_NEGPl1_K15HIV-1 isolate from USAquadruplex qPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190862	5104_SEB_NEGPl1_M8	USA	2016/2018		genomic DNA	PBMC	5104_SEB_NEGPl1_M8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190861	5104_SEB_NEGPl1_N6	USA	2016/2018		genomic DNA	PBMC	5104_SEB_NEGPl1_N6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT189306	5104_SEB_NEGPl1_O1	USA	2016/2018		genomic DNA	PBMC	5104_SEB_NEGPl1_O1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,14P,15L,41T,83L,87Q,96I,110N,116A,133*,148V,178T,200S
MT190863	5104_SEB_NEGPl2_C10	USA	2016/2018		genomic DNA	PBMC	5104_SEB_NEGPl2_C10HIV-1 isolate from USAquadruplex qPCR(Q4PCR) sequenced genome (intact)	1	231	6L,14P,15L,31S,44A,83L,110N,116A,148V,178T,200S,225S
MT190864	5104_SEB_NEGPl2_N8	USA	2016/2018		genomic DNA	PBMC	5104_SEB_NEGPl2_N8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190865	5104_wk-2_1_A8	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_1_A8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,14P,15L,31S,44A,83L,110N,116A,148V,178T,200S
MT190866	5104_wk-2_1_B15	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_1_B15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190867	5104_wk-2_1_B17	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_1_B17HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190868	5104_wk-2_1_B23	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_1_B23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190869	5104_wk-2_1_C12	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_1_C12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190870	5104_wk-2_1_D10	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_1_D10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190871	5104_wk-2_1_E12	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_1_E12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190872	5104_wk-2_1_E13	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_1_E13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190873	5104_wk-2_1_E16	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_1_E16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT189307	5104_wk-2_1_G12	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_1_G12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6V,14P,15L,41T,83L,87Q,96I,110N,116A,148V,178T,200S
MT190874	5104_wk-2_1_G14	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_1_G14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190875	5104_wk-2_1_G23	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_1_G23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190876	5104_wk-2_1_G24	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_1_G24HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190877	5104_wk-2_1_G6	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_1_G6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190878	5104_wk-2_1_H15	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_1_H15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190879	5104_wk-2_1_I22	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_1_I22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190882	5104_wk-2_1_J2	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_1_J2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190880	5104_wk-2_1_J5	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_1_J5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190881	5104_wk-2_1_J6	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_1_J6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190883	5104_wk-2_1_K11	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_1_K11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT189308	5104_wk-2_1_K13	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_1_K13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6V,14P,15L,41T,83L,87Q,96I,110N,116A,120H,148V,178T,200S
MT190884	5104_wk-2_1_K23	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_1_K23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190885	5104_wk-2_1_K6	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_1_K6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190886	5104_wk-2_1_L18	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_1_L18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190887	5104_wk-2_1_L20	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_1_L20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190888	5104_wk-2_1_L4	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_1_L4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190889	5104_wk-2_1_L9	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_1_L9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190890	5104_wk-2_1_M13	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_1_M13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT189338	5104_wk-2_1_M21	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_1_M21HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6V,14P,15L,41T,83L,86A,87Q,96I,110N,116A,148V,178T,200S
MT189328	5104_wk-2_1_O1	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_1_O1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6V,14P,15L,41T,83L,100K,110N,116A,148V,162K,173K,178T,184*,200S,220R
MT190891	5104_wk-2_1_O20	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_1_O20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190893	5104_wk-2_1_O4	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_1_O4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT189309	5104_wk-2_1_P1	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_1_P1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6V,14P,15L,41T,83L,86A,87Q,96I,110N,116A,148V,178T,200S
MT190892	5104_wk-2_1_P14	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_1_P14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190894	5104_wk-2_1_P9	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_1_P9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190897	5104_wk-2_2_B1	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_2_B1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190895	5104_wk-2_2_B16	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_2_B16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190896	5104_wk-2_2_B17	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_2_B17HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190898	5104_wk-2_2_B21	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_2_B21HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190899	5104_wk-2_2_B7	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_2_B7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190900	5104_wk-2_2_C8	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_2_C8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190901	5104_wk-2_2_D19	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_2_D19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190902	5104_wk-2_2_D23	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_2_D23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT189310	5104_wk-2_2_E16	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_2_E16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT189311	5104_wk-2_2_E17	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_2_E17HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190903	5104_wk-2_2_E4	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_2_E4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190904	5104_wk-2_2_F18	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_2_F18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,87Q,96I,110N,116A,120H,148V,178T,200S
MT190905	5104_wk-2_2_F2	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_2_F2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190906	5104_wk-2_2_F6	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_2_F6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190907	5104_wk-2_2_G20	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_2_G20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190908	5104_wk-2_2_H4	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_2_H4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190909	5104_wk-2_2_H8	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_2_H8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190910	5104_wk-2_2_H9	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_2_H9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190911	5104_wk-2_2_I16	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_2_I16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190912	5104_wk-2_2_I17	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_2_I17HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190913	5104_wk-2_2_I19	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_2_I19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190914	5104_wk-2_2_I21	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_2_I21HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190915	5104_wk-2_2_I5	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_2_I5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190916	5104_wk-2_2_J18	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_2_J18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190917	5104_wk-2_2_K14	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_2_K14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT189312	5104_wk-2_2_L19	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_2_L19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190918	5104_wk-2_2_L20	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_2_L20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190919	5104_wk-2_2_M21	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_2_M21HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT189329	5104_wk-2_2_M9	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_2_M9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6V,10I,14P,15L,23*,41T,60E,80*,83L,86A,87Q,96I,100K,110N,116A,117*,133*,137R,148V,167Q,173K,178T,184*,200S,206R,213K,220R,222K,223R
MT190920	5104_wk-2_2_N23	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_2_N23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190921	5104_wk-2_2_O9	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_2_O9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190922	5104_wk-2_3_A20	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_3_A20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190923	5104_wk-2_3_B13	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_3_B13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190924	5104_wk-2_3_B14	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_3_B14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190925	5104_wk-2_3_B3	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_3_B3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190926	5104_wk-2_3_B6	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_3_B6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190927	5104_wk-2_3_C21	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_3_C21HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190928	5104_wk-2_3_C5	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_3_C5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190929	5104_wk-2_3_D14	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_3_D14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190930	5104_wk-2_3_D2	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_3_D2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT189319	5104_wk-2_3_E1	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_3_E1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (msd_mutation)	1	231	6L,14P,15L,31S,44A,83L,87Q,96I,110N,116A,120H,148V,178T,200S
MT190931	5104_wk-2_3_F20	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_3_F20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190932	5104_wk-2_3_F23	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_3_F23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT189313	5104_wk-2_3_F6	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_3_F6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6V,14P,15L,41T,83L,87Q,96I,110N,116A,120H,148V,178T,200S
MT190933	5104_wk-2_3_G15	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_3_G15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190934	5104_wk-2_3_G20	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_3_G20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190936	5104_wk-2_3_G24	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_3_G24HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190935	5104_wk-2_3_G6	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_3_G6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190937	5104_wk-2_3_H15	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_3_H15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190938	5104_wk-2_3_H21	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_3_H21HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190939	5104_wk-2_3_H23	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_3_H23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190940	5104_wk-2_3_H8	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_3_H8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190941	5104_wk-2_3_I13	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_3_I13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT189330	5104_wk-2_3_I16	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_3_I16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6V,8R,10I,14P,15L,41T,80*,83L,110N,116A,117*,133*,144I,148V,156R,167Q,173K,178T,184*,200S
MT189314	5104_wk-2_3_J12	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_3_J12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190942	5104_wk-2_3_J13	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_3_J13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190943	5104_wk-2_3_J23	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_3_J23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190945	5104_wk-2_3_K1	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_3_K1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190944	5104_wk-2_3_K13	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_3_K13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190946	5104_wk-2_3_L5	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_3_L5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190947	5104_wk-2_3_L6	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_3_L6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT189315	5104_wk-2_3_L9	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_3_L9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,14P,15L,31S,44A,83L,110N,116A,148I,178T,200S,225S
MT190948	5104_wk-2_3_O15	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_3_O15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190949	5104_wk-2_3_O18	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_3_O18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190950	5104_wk-2_3_O23	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_3_O23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190951	5104_wk-2_3_P17	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_3_P17HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190952	5104_wk-2_3_P8	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_3_P8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190953	5104_wk-2_4_A15	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_4_A15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190954	5104_wk-2_4_A20	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_4_A20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190955	5104_wk-2_4_A23	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_4_A23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190956	5104_wk-2_4_D11	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_4_D11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190957	5104_wk-2_4_D14	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_4_D14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190958	5104_wk-2_4_D17	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_4_D17HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190960	5104_wk-2_4_D21	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_4_D21HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190959	5104_wk-2_4_F10	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_4_F10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT189321	5104_wk-2_4_F18	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_4_F18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (msd_mutation)	1	231	6L,14P,15L,31S,44A,83L,110N,116A,148V,178T,200S,225S
MT190961	5104_wk-2_4_G1	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_4_G1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190962	5104_wk-2_4_G2	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_4_G2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT189273	5104_wk-2_4_H18	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_4_H18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,14P,15L,83L,110N,116A,118I,166N,178T,214I,215I
MT190963	5104_wk-2_4_H6	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_4_H6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190964	5104_wk-2_4_I17	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_4_I17HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190965	5104_wk-2_4_J12	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_4_J12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT189274	5104_wk-2_4_K13	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_4_K13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6V,14P,15L,41T,80*,83L,100K,110N,116A,117*,148V,173K,178T,200S
MT190966	5104_wk-2_4_K17	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_4_K17HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT189277	5104_wk-2_4_L20	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_4_L20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190967	5104_wk-2_4_M12	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_4_M12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190968	5104_wk-2_4_M9	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_4_M9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190969	5104_wk-2_4_O8	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_4_O8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT189331	5104_wk-2_4_P8	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_4_P8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190970	5104_wk-2_5_A24	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_5_A24HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190971	5104_wk-2_5_B16	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_5_B16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190974	5104_wk-2_5_B9	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_5_B9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190972	5104_wk-2_5_C12	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_5_C12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190973	5104_wk-2_5_D23	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_5_D23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190975	5104_wk-2_5_D3	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_5_D3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190976	5104_wk-2_5_E1	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_5_E1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT189340	5104_wk-2_5_E12	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_5_E12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190977	5104_wk-2_5_E8	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_5_E8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190978	5104_wk-2_5_F15	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_5_F15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT189282	5104_wk-2_5_F16	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_5_F16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6V,14P,15L,41T,83L,86A,87Q,96I,110N,116A,148V,178T,200S
MT190979	5104_wk-2_5_F2	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_5_F2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT189284	5104_wk-2_5_G14	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_5_G14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190980	5104_wk-2_5_G7	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_5_G7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190982	5104_wk-2_5_G9	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_5_G9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT189320	5104_wk-2_5_I14	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_5_I14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (msd_mutation)	1	231	6L,14P,15L,31S,44A,83L,87Q,96I,110N,116A,120H,148V,178T,200S
MT190981	5104_wk-2_5_I23	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_5_I23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT189332	5104_wk-2_5_J16	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_5_J16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6V,14P,15L,23*,41T,80*,83L,101R,110N,113K,116A,117*,133*,148V,156R,173K,178T,184*,200S,220R,222R
MT189287	5104_wk-2_5_L21	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_5_L21HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190983	5104_wk-2_5_M7	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_5_M7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT189333	5104_wk-2_5_M9	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_5_M9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190985	5104_wk-2_5_O10	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_5_O10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT189334	5104_wk-2_5_O18	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_5_O18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190984	5104_wk-2_5_O23	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_5_O23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190986	5104_wk-2_5_P15	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_5_P15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190987	5104_wk-2_5_P18	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_5_P18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190988	5104_wk-2_5_P20	USA	2016/2018		genomic DNA	PBMC	5104_wk-2_5_P20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6V,14P,15L,41T,83L,110N,116A,148V,178T,200S
MT190989	5106_GAG_NEG_B5	USA	2016/2018		genomic DNA	PBMC	5106_GAG_NEG_B5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,41T,83L,86A,87Q,91V,98D,120H,154K,180D,207T,208G
MT190990	5106_GAG_NEG_C9	USA	2016/2018		genomic DNA	PBMC	5106_GAG_NEG_C9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,41T,83L,86A,87Q,91V,98D,120H,154K,180D,207T,208G
MT190991	5106_GAG_NEG_G6	USA	2016/2018		genomic DNA	PBMC	5106_GAG_NEG_G6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,41T,83L,86A,87Q,91V,98D,120H,154K,180D,207T,208G
MT190993	5106_MOGPl2_H17	USA	2016/2018		genomic DNA	PBMC	5106_MOGPl2_H17HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,41T,83L,86A,87Q,91V,98D,112R,116E,120H,154K,180D,207T,208G
MT190992	5106_MOGPl3_C5	USA	2016/2018		genomic DNA	PBMC	5106_MOGPl3_C5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,41T,83L,86A,87Q,91V,98D,120H,154K,180D,207T,208G
MT190994	5106_MOGPl4_D4	USA	2016/2018		genomic DNA	PBMC	5106_MOGPl4_D4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,41T,83L,86A,87Q,91V,98D,120H,154K,180D,207T,208G
MT190995	5106_wk-2_pl1_H6	USA	2016/2018		genomic DNA	PBMC	5106_wk-2_pl1_H6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,41T,83L,86A,87Q,91V,98D,112R,116E,120H,154K,180D,207T,208G
MT190996	5106_wk-2_pl1_N16	USA	2016/2018		genomic DNA	PBMC	5106_wk-2_pl1_N16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,41T,83L,86A,87Q,91V,98D,120H,154K,180D,207T,208G
MT190998	5106_wk-2_pl1_O8	USA	2016/2018		genomic DNA	PBMC	5106_wk-2_pl1_O8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,41T,83L,86A,87Q,91V,98D,120H,154K,180D,207T,208G
MT189341	5106_wk-2_pl2_D13	USA	2016/2018		genomic DNA	PBMC	5106_wk-2_pl2_D13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,41T,83L,86A,87Q,91V,98D,112R,116E,120H,154K,180D,207T,208G
MT190997	5106_wk-2_pl2_F16	USA	2016/2018		genomic DNA	PBMC	5106_wk-2_pl2_F16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,41T,83L,86A,87Q,91V,98D,120H,154K,180D,207T,208G
MT190999	5106_wk-2_pl2_I22	USA	2016/2018		genomic DNA	PBMC	5106_wk-2_pl2_I22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,41T,83L,86A,87Q,91V,98D,120H,154K,180D,207T,208G
MT191000	5106_wk-2_pl2_M18	USA	2016/2018		genomic DNA	PBMC	5106_wk-2_pl2_M18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,41T,83L,86A,87Q,91V,98D,112R,116E,120H,154K,180D,207T,208G
MT191001	5106_wk-2_pl2_M8	USA	2016/2018		genomic DNA	PBMC	5106_wk-2_pl2_M8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,41T,83L,86A,87Q,91V,98D,120H,154K,180D,207T,208G
MT191002	5106_wk-2_pl2_O10	USA	2016/2018		genomic DNA	PBMC	5106_wk-2_pl2_O10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,41T,83L,86A,87Q,91V,98D,120H,154K,180D,207T,208G
MT189343	5106_wk-2_pl3_B5	USA	2016/2018		genomic DNA	PBMC	5106_wk-2_pl3_B5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,41T,83L,86A,87Q,91V,98D,112R,116E,120H,154K,180D,207T,208G
MT191003	5106_wk-2_pl3_E13	USA	2016/2018		genomic DNA	PBMC	5106_wk-2_pl3_E13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,41T,83L,86A,87Q,91V,98D,120H,154K,180D,207T,208G
MT189342	5106_wk-2_pl3_F18	USA	2016/2018		genomic DNA	PBMC	5106_wk-2_pl3_F18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,41T,83L,86A,87Q,91V,98D,112R,116E,120H,154K,180D,207T,208G
MT189347	5106_wk-2_pl3_F4	USA	2016/2018		genomic DNA	PBMC	5106_wk-2_pl3_F4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6L,15L,23*,41T,46R,80*,83L,86A,87Q,91V,98D,117*,120H,137R,154K,167Q,180D,184*,207T,208G
MT191004	5106_wk-2_pl3_M21	USA	2016/2018		genomic DNA	PBMC	5106_wk-2_pl3_M21HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,41T,83L,86A,87Q,91V,98D,120H,154K,180D,207T,208G
MT189344	5106_wk-2_pl4_E23	USA	2016/2018		genomic DNA	PBMC	5106_wk-2_pl4_E23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,41T,83L,86A,87Q,91V,98D,112R,116E,120H,154K,180D,207T,208G
MT191005	5106_wk-2_pl4_L1	USA	2016/2018		genomic DNA	PBMC	5106_wk-2_pl4_L1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,41T,83L,86A,87Q,91V,98D,112R,116E,120H,154K,180D,207T,208G
MT189345	5106_wk-2_pl4_M2	USA	2016/2018		genomic DNA	PBMC	5106_wk-2_pl4_M2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,41T,83L,86A,87Q,91V,98D,120H,154K,180D,207T,208G
MT191007	5106_wk-2_pl5_B21	USA	2016/2018		genomic DNA	PBMC	5106_wk-2_pl5_B21HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,41T,83L,86A,87Q,91V,98D,120H,154K,180D,207T,208G
MT191006	5106_wk-2_pl5_G20	USA	2016/2018		genomic DNA	PBMC	5106_wk-2_pl5_G20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,41T,83L,86A,87Q,91V,98D,112R,116E,120H,154K,180D,207T,208G
MT191008	5106_wk-2_pl5_O9	USA	2016/2018		genomic DNA	PBMC	5106_wk-2_pl5_O9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,41T,83L,86A,87Q,91V,98D,120H,154K,180D,207T,208G
MT189350	603_CMV_AIM_G23	USA	2016/2018		genomic DNA	PBMC	603_CMV_AIM_G23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189352	603_CMV_AIM_H5	USA	2016/2018		genomic DNA	PBMC	603_CMV_AIM_H5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189354	603_CMV_AIM_J12	USA	2016/2018		genomic DNA	PBMC	603_CMV_AIM_J12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189356	603_CMV_AIM_M11	USA	2016/2018		genomic DNA	PBMC	603_CMV_AIM_M11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189358	603_CMV_AIM_N21	USA	2016/2018		genomic DNA	PBMC	603_CMV_AIM_N21HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189360	603_CMV_AIM_O17	USA	2016/2018		genomic DNA	PBMC	603_CMV_AIM_O17HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189363	603_CMV_CD69_B10	USA	2016/2018		genomic DNA	PBMC	603_CMV_CD69_B10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189364	603_CMV_CD69_C2	USA	2016/2018		genomic DNA	PBMC	603_CMV_CD69_C2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,230I
MT189366	603_CMV_CD69_D10	USA	2016/2018		genomic DNA	PBMC	603_CMV_CD69_D10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189368	603_CMV_CD69_I24	USA	2016/2018		genomic DNA	PBMC	603_CMV_CD69_I24HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189370	603_CMV_CD69_L22	USA	2016/2018		genomic DNA	PBMC	603_CMV_CD69_L22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189871	603_CMV_CD69_L9	USA	2016/2018		genomic DNA	PBMC	603_CMV_CD69_L9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6L,83L,116A,120S,230I
MT189372	603_CMV_NEG_A21	USA	2016/2018		genomic DNA	PBMC	603_CMV_NEG_A21HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189374	603_CMV_NEG_C1	USA	2016/2018		genomic DNA	PBMC	603_CMV_NEG_C1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189376	603_CMV_NEG_K12	USA	2016/2018		genomic DNA	PBMC	603_CMV_NEG_K12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189378	603_CMV_NEG_L16	USA	2016/2018		genomic DNA	PBMC	603_CMV_NEG_L16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189380	603_CMV_NEG_M16	USA	2016/2018		genomic DNA	PBMC	603_CMV_NEG_M16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189382	603_GAG_AIM_A19	USA	2016/2018		genomic DNA	PBMC	603_GAG_AIM_A19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189384	603_GAG_AIM_A2	USA	2016/2018		genomic DNA	PBMC	603_GAG_AIM_A2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,178T,230I
MT189385	603_GAG_AIM_A6	USA	2016/2018		genomic DNA	PBMC	603_GAG_AIM_A6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189387	603_GAG_AIM_B12	USA	2016/2018		genomic DNA	PBMC	603_GAG_AIM_B12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189390	603_GAG_AIM_B18	USA	2016/2018		genomic DNA	PBMC	603_GAG_AIM_B18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189392	603_GAG_AIM_C13	USA	2016/2018		genomic DNA	PBMC	603_GAG_AIM_C13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189394	603_GAG_AIM_C19	USA	2016/2018		genomic DNA	PBMC	603_GAG_AIM_C19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189396	603_GAG_AIM_C23	USA	2016/2018		genomic DNA	PBMC	603_GAG_AIM_C23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189399	603_GAG_AIM_D23	USA	2016/2018		genomic DNA	PBMC	603_GAG_AIM_D23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189400	603_GAG_AIM_E13	USA	2016/2018		genomic DNA	PBMC	603_GAG_AIM_E13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189875	603_GAG_AIM_E21	USA	2016/2018		genomic DNA	PBMC	603_GAG_AIM_E21HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6L,83L,116A,120S,180D,230I
MT189404	603_GAG_AIM_F1	USA	2016/2018		genomic DNA	PBMC	603_GAG_AIM_F1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189402	603_GAG_AIM_F15	USA	2016/2018		genomic DNA	PBMC	603_GAG_AIM_F15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189406	603_GAG_AIM_G15	USA	2016/2018		genomic DNA	PBMC	603_GAG_AIM_G15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189408	603_GAG_AIM_G18	USA	2016/2018		genomic DNA	PBMC	603_GAG_AIM_G18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189410	603_GAG_AIM_G2	USA	2016/2018		genomic DNA	PBMC	603_GAG_AIM_G2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189413	603_GAG_AIM_H15	USA	2016/2018		genomic DNA	PBMC	603_GAG_AIM_H15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189416	603_GAG_AIM_H2	USA	2016/2018		genomic DNA	PBMC	603_GAG_AIM_H2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189415	603_GAG_AIM_H24	USA	2016/2018		genomic DNA	PBMC	603_GAG_AIM_H24HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189418	603_GAG_AIM_H7	USA	2016/2018		genomic DNA	PBMC	603_GAG_AIM_H7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189349	603_GAG_AIM_I16	USA	2016/2018		genomic DNA	PBMC	603_GAG_AIM_I16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189353	603_GAG_AIM_J12	USA	2016/2018		genomic DNA	PBMC	603_GAG_AIM_J12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189355	603_GAG_AIM_J17	USA	2016/2018		genomic DNA	PBMC	603_GAG_AIM_J17HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189357	603_GAG_AIM_J2	USA	2016/2018		genomic DNA	PBMC	603_GAG_AIM_J2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189359	603_GAG_AIM_J8	USA	2016/2018		genomic DNA	PBMC	603_GAG_AIM_J8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189361	603_GAG_AIM_K18	USA	2016/2018		genomic DNA	PBMC	603_GAG_AIM_K18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189367	603_GAG_AIM_L7	USA	2016/2018		genomic DNA	PBMC	603_GAG_AIM_L7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189365	603_GAG_AIM_N22	USA	2016/2018		genomic DNA	PBMC	603_GAG_AIM_N22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189375	603_GAG_AIM_O1	USA	2016/2018		genomic DNA	PBMC	603_GAG_AIM_O1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189369	603_GAG_AIM_O13	USA	2016/2018		genomic DNA	PBMC	603_GAG_AIM_O13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189371	603_GAG_AIM_O14	USA	2016/2018		genomic DNA	PBMC	603_GAG_AIM_O14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,178T,180D,230I
MT189373	603_GAG_AIM_O18	USA	2016/2018		genomic DNA	PBMC	603_GAG_AIM_O18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,230I
MT189377	603_GAG_AIM_O4	USA	2016/2018		genomic DNA	PBMC	603_GAG_AIM_O4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189419	603_GAG_AIM_P3	USA	2016/2018		genomic DNA	PBMC	603_GAG_AIM_P3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189421	603_GAG_CD69_A19	USA	2016/2018		genomic DNA	PBMC	603_GAG_CD69_A19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189423	603_GAG_CD69_B22	USA	2016/2018		genomic DNA	PBMC	603_GAG_CD69_B22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189425	603_GAG_CD69_B23	USA	2016/2018		genomic DNA	PBMC	603_GAG_CD69_B23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189379	603_GAG_CD69_C7	USA	2016/2018		genomic DNA	PBMC	603_GAG_CD69_C7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189381	603_GAG_CD69_D19	USA	2016/2018		genomic DNA	PBMC	603_GAG_CD69_D19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189383	603_GAG_CD69_E5	USA	2016/2018		genomic DNA	PBMC	603_GAG_CD69_E5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189386	603_GAG_CD69_E7	USA	2016/2018		genomic DNA	PBMC	603_GAG_CD69_E7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189388	603_GAG_CD69_F13	USA	2016/2018		genomic DNA	PBMC	603_GAG_CD69_F13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT191009	603_GAG_CD69_G15	USA	2016/2018		genomic DNA	PBMC	603_GAG_CD69_G15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,83L,116A,120S,180D,230I
MT189389	603_GAG_CD69_H12	USA	2016/2018		genomic DNA	PBMC	603_GAG_CD69_H12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189391	603_GAG_CD69_K14	USA	2016/2018		genomic DNA	PBMC	603_GAG_CD69_K14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189393	603_GAG_CD69_N22	USA	2016/2018		genomic DNA	PBMC	603_GAG_CD69_N22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189395	603_GAG_CD69_O6	USA	2016/2018		genomic DNA	PBMC	603_GAG_CD69_O6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,178T,230I
MT189397	603_GAG_CD69_P6	USA	2016/2018		genomic DNA	PBMC	603_GAG_CD69_P6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189401	603_GAG_NEG_D5	USA	2016/2018		genomic DNA	PBMC	603_GAG_NEG_D5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,184*,230I
MT189403	603_GAG_NEG_F17	USA	2016/2018		genomic DNA	PBMC	603_GAG_NEG_F17HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189405	603_GAG_NEG_G21	USA	2016/2018		genomic DNA	PBMC	603_GAG_NEG_G21HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,23*,83L,106R,116A,117*,120S,230I
MT189877	603_GAG_NEG_H9	USA	2016/2018		genomic DNA	PBMC	603_GAG_NEG_H9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6L,83L,116A,120S,230I
MT189407	603_GAG_NEG_I22	USA	2016/2018		genomic DNA	PBMC	603_GAG_NEG_I22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189409	603_GAG_NEG_K2	USA	2016/2018		genomic DNA	PBMC	603_GAG_NEG_K2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120G,178T,230I
MT189411	603_GAG_NEG_K7	USA	2016/2018		genomic DNA	PBMC	603_GAG_NEG_K7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,230I
MT189859	603_GAG_NEG_M6	USA	2016/2018		genomic DNA	PBMC	603_GAG_NEG_M6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6L,83L,116A,120S,223R,224N,228E,230I
MT189412	603_GAG_NEG_N15	USA	2016/2018		genomic DNA	PBMC	603_GAG_NEG_N15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT191010	603_GAG_NEG_N24	USA	2016/2018		genomic DNA	PBMC	603_GAG_NEG_N24HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,83L,116A,120S,178T,230I
MT189880	603_GAG_NEG_N5	USA	2016/2018		genomic DNA	PBMC	603_GAG_NEG_N5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6L,83L,116A,120S,178T,230I
MT189414	603_MOG_C4	USA	2016/2018		genomic DNA	PBMC	603_MOG_C4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189417	603_MOG_C6	USA	2016/2018		genomic DNA	PBMC	603_MOG_C6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189420	603_MOG_E20	USA	2016/2018		genomic DNA	PBMC	603_MOG_E20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189422	603_MOG_F3	USA	2016/2018		genomic DNA	PBMC	603_MOG_F3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189424	603_MOG_N1	USA	2016/2018		genomic DNA	PBMC	603_MOG_N1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189351	603_MOG_P7	USA	2016/2018		genomic DNA	PBMC	603_MOG_P7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189426	603_MOGPl2_A24	USA	2016/2018		genomic DNA	PBMC	603_MOGPl2_A24HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,32V,83L,116A,118R,120S,180D,230I
MT189427	603_MOGPl2_F9	USA	2016/2018		genomic DNA	PBMC	603_MOGPl2_F9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189428	603_MOGPl3_A12	USA	2016/2018		genomic DNA	PBMC	603_MOGPl3_A12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189429	603_MOGPl3_F22	USA	2016/2018		genomic DNA	PBMC	603_MOGPl3_F22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189431	603_MOGPl3_K20	USA	2016/2018		genomic DNA	PBMC	603_MOGPl3_K20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189432	603_MOGPl3_K22	USA	2016/2018		genomic DNA	PBMC	603_MOGPl3_K22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,78V,83L,116A,120S,230I
MT189881	603_MOGPl4_B13	USA	2016/2018		genomic DNA	PBMC	603_MOGPl4_B13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6L,83L,116A,120S,180D,230I
MT189434	603_MOGPl4_D15	USA	2016/2018		genomic DNA	PBMC	603_MOGPl4_D15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189436	603_MOGPl4_D17	USA	2016/2018		genomic DNA	PBMC	603_MOGPl4_D17HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189435	603_MOGPl5_A20	USA	2016/2018		genomic DNA	PBMC	603_MOGPl5_A20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189437	603_MOGPl5_B17	USA	2016/2018		genomic DNA	PBMC	603_MOGPl5_B17HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189861	603_MOGPl5_D1	USA	2016/2018		genomic DNA	PBMC	603_MOGPl5_D1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6L,83L,116A,120S,178T,230I
MT189438	603_MOGPl5_H12	USA	2016/2018		genomic DNA	PBMC	603_MOGPl5_H12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189440	603_MOGPl5_H15	USA	2016/2018		genomic DNA	PBMC	603_MOGPl5_H15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,23*,80*,83L,116A,117*,120S,133*,178T,184*,220R,230I
MT189885	603_MOGPl5_H20	USA	2016/2018		genomic DNA	PBMC	603_MOGPl5_H20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189433	603_MOGPl5_H4	USA	2016/2018		genomic DNA	PBMC	603_MOGPl5_H4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189439	603_MOGPl5_M14	USA	2016/2018		genomic DNA	PBMC	603_MOGPl5_M14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189887	603_MOGPl5_N12	USA	2016/2018		genomic DNA	PBMC	603_MOGPl5_N12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6L,83L,116A,120S,180D,230I
MT189441	603_MOGPl5_O20	USA	2016/2018		genomic DNA	PBMC	603_MOGPl5_O20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189442	603_MOGPl5_O24	USA	2016/2018		genomic DNA	PBMC	603_MOGPl5_O24HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189443	603_MOGPl6_C20	USA	2016/2018		genomic DNA	PBMC	603_MOGPl6_C20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189444	603_MOGPl6_G9	USA	2016/2018		genomic DNA	PBMC	603_MOGPl6_G9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230L,231S
MT189445	603_MOGPl6_J13	USA	2016/2018		genomic DNA	PBMC	603_MOGPl6_J13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189446	603_MOGPl6_K24	USA	2016/2018		genomic DNA	PBMC	603_MOGPl6_K24HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189447	603_MOGPl6_L20	USA	2016/2018		genomic DNA	PBMC	603_MOGPl6_L20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189448	603_MOGPl6_O23	USA	2016/2018		genomic DNA	PBMC	603_MOGPl6_O23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189449	603_MOGPl7_B11	USA	2016/2018		genomic DNA	PBMC	603_MOGPl7_B11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189450	603_MOGPl7_C21	USA	2016/2018		genomic DNA	PBMC	603_MOGPl7_C21HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189451	603_MOGPl7_J9	USA	2016/2018		genomic DNA	PBMC	603_MOGPl7_J9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189452	603_MOGPl7_O11	USA	2016/2018		genomic DNA	PBMC	603_MOGPl7_O11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,23*,60E,80*,83L,100K,116A,120S,133*,137R,180N,206R,220R,222R,225S,230I
MT189453	603_MOGPl7_P21	USA	2016/2018		genomic DNA	PBMC	603_MOGPl7_P21HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189454	603_MOGPl7_P4	USA	2016/2018		genomic DNA	PBMC	603_MOGPl7_P4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189456	603_MOGPl8_C16	USA	2016/2018		genomic DNA	PBMC	603_MOGPl8_C16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,178T,230I
MT189455	603_MOGPl8_E5	USA	2016/2018		genomic DNA	PBMC	603_MOGPl8_E5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,180D,230I
MT189457	603_MOGPl8_G13	USA	2016/2018		genomic DNA	PBMC	603_MOGPl8_G13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189458	603_MOGPl8_H13	USA	2016/2018		genomic DNA	PBMC	603_MOGPl8_H13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189459	603_MOGPl8_H23	USA	2016/2018		genomic DNA	PBMC	603_MOGPl8_H23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189460	603_MOGPl8_K24	USA	2016/2018		genomic DNA	PBMC	603_MOGPl8_K24HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230L,231S
MT189462	603_MOGPl8_N9	USA	2016/2018		genomic DNA	PBMC	603_MOGPl8_N9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,230I
MT189461	603_Q1_C13	USA	2016/2018		genomic DNA	PBMC	603_Q1_C13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189463	603_Q1_C18	USA	2016/2018		genomic DNA	PBMC	603_Q1_C18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189464	603_Q1_C21	USA	2016/2018		genomic DNA	PBMC	603_Q1_C21HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189465	603_Q1_E12	USA	2016/2018		genomic DNA	PBMC	603_Q1_E12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189466	603_Q1_E17	USA	2016/2018		genomic DNA	PBMC	603_Q1_E17HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189468	603_Q1_F17	USA	2016/2018		genomic DNA	PBMC	603_Q1_F17HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189469	603_Q1_F9	USA	2016/2018		genomic DNA	PBMC	603_Q1_F9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189470	603_Q1_J15	USA	2016/2018		genomic DNA	PBMC	603_Q1_J15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189472	603_Q1_K14	USA	2016/2018		genomic DNA	PBMC	603_Q1_K14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189474	603_Q1_L14	USA	2016/2018		genomic DNA	PBMC	603_Q1_L14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189473	603_Q1_L19	USA	2016/2018		genomic DNA	PBMC	603_Q1_L19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189475	603_Q1_M11	USA	2016/2018		genomic DNA	PBMC	603_Q1_M11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,230I
MT189478	603_Q10_A22	USA	2016/2018		genomic DNA	PBMC	603_Q10_A22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189479	603_Q10_B9	USA	2016/2018		genomic DNA	PBMC	603_Q10_B9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189480	603_Q10_C23	USA	2016/2018		genomic DNA	PBMC	603_Q10_C23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189481	603_Q10_D2	USA	2016/2018		genomic DNA	PBMC	603_Q10_D2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189482	603_Q10_D7	USA	2016/2018		genomic DNA	PBMC	603_Q10_D7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,230I
MT189483	603_Q10_E15	USA	2016/2018		genomic DNA	PBMC	603_Q10_E15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189484	603_Q10_E21	USA	2016/2018		genomic DNA	PBMC	603_Q10_E21HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189485	603_Q10_F14	USA	2016/2018		genomic DNA	PBMC	603_Q10_F14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189486	603_Q10_F8	USA	2016/2018		genomic DNA	PBMC	603_Q10_F8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189487	603_Q10_H6	USA	2016/2018		genomic DNA	PBMC	603_Q10_H6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,230I
MT189488	603_Q10_K7	USA	2016/2018		genomic DNA	PBMC	603_Q10_K7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189489	603_Q10_L18	USA	2016/2018		genomic DNA	PBMC	603_Q10_L18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189889	603_Q10_L7	USA	2016/2018		genomic DNA	PBMC	603_Q10_L7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189491	603_Q10_N18	USA	2016/2018		genomic DNA	PBMC	603_Q10_N18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189890	603_Q10_O23	USA	2016/2018		genomic DNA	PBMC	603_Q10_O23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189492	603_Q10_P10	USA	2016/2018		genomic DNA	PBMC	603_Q10_P10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189493	603_Q10_P16	USA	2016/2018		genomic DNA	PBMC	603_Q10_P16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189494	603_Q11_B11	USA	2016/2018		genomic DNA	PBMC	603_Q11_B11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189495	603_Q11_B9	USA	2016/2018		genomic DNA	PBMC	603_Q11_B9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189498	603_Q11_C1	USA	2016/2018		genomic DNA	PBMC	603_Q11_C1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189496	603_Q11_C12	USA	2016/2018		genomic DNA	PBMC	603_Q11_C12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	228	6L,83L,116A,120S,180D,228P
MT189497	603_Q11_C14	USA	2016/2018		genomic DNA	PBMC	603_Q11_C14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,230I
MT189499	603_Q11_C22	USA	2016/2018		genomic DNA	PBMC	603_Q11_C22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189500	603_Q11_D16	USA	2016/2018		genomic DNA	PBMC	603_Q11_D16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189501	603_Q11_D2	USA	2016/2018		genomic DNA	PBMC	603_Q11_D2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189502	603_Q11_E11	USA	2016/2018		genomic DNA	PBMC	603_Q11_E11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189503	603_Q11_E20	USA	2016/2018		genomic DNA	PBMC	603_Q11_E20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189504	603_Q11_E4	USA	2016/2018		genomic DNA	PBMC	603_Q11_E4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189505	603_Q11_G18	USA	2016/2018		genomic DNA	PBMC	603_Q11_G18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,178T,230I
MT189506	603_Q11_H20	USA	2016/2018		genomic DNA	PBMC	603_Q11_H20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,230I
MT189507	603_Q11_I14	USA	2016/2018		genomic DNA	PBMC	603_Q11_I14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189508	603_Q11_I15	USA	2016/2018		genomic DNA	PBMC	603_Q11_I15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,178T,230I
MT189509	603_Q11_I19	USA	2016/2018		genomic DNA	PBMC	603_Q11_I19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189510	603_Q11_J19	USA	2016/2018		genomic DNA	PBMC	603_Q11_J19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189511	603_Q11_J8	USA	2016/2018		genomic DNA	PBMC	603_Q11_J8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189891	603_Q11_K12	USA	2016/2018		genomic DNA	PBMC	603_Q11_K12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6L,83L,116A,120S,180D,230I
MT189513	603_Q11_K7	USA	2016/2018		genomic DNA	PBMC	603_Q11_K7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189512	603_Q11_L7	USA	2016/2018		genomic DNA	PBMC	603_Q11_L7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189514	603_Q11_M22	USA	2016/2018		genomic DNA	PBMC	603_Q11_M22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189515	603_Q11_N23	USA	2016/2018		genomic DNA	PBMC	603_Q11_N23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189516	603_Q11_O13	USA	2016/2018		genomic DNA	PBMC	603_Q11_O13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189517	603_Q11_O14	USA	2016/2018		genomic DNA	PBMC	603_Q11_O14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189518	603_Q11_O17	USA	2016/2018		genomic DNA	PBMC	603_Q11_O17HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189519	603_Q11_P6	USA	2016/2018		genomic DNA	PBMC	603_Q11_P6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189520	603_Q12_A15	USA	2016/2018		genomic DNA	PBMC	603_Q12_A15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189521	603_Q12_A3	USA	2016/2018		genomic DNA	PBMC	603_Q12_A3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189522	603_Q12_B12	USA	2016/2018		genomic DNA	PBMC	603_Q12_B12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189523	603_Q12_B9	USA	2016/2018		genomic DNA	PBMC	603_Q12_B9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT191011	603_Q12_C24	USA	2016/2018		genomic DNA	PBMC	603_Q12_C24HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,78V,83L,116A,120S,230I
MT189525	603_Q12_E21	USA	2016/2018		genomic DNA	PBMC	603_Q12_E21HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189527	603_Q12_G21	USA	2016/2018		genomic DNA	PBMC	603_Q12_G21HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189528	603_Q12_I3	USA	2016/2018		genomic DNA	PBMC	603_Q12_I3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189529	603_Q12_K24	USA	2016/2018		genomic DNA	PBMC	603_Q12_K24HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189530	603_Q12_L10	USA	2016/2018		genomic DNA	PBMC	603_Q12_L10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189531	603_Q12_L19	USA	2016/2018		genomic DNA	PBMC	603_Q12_L19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189532	603_Q12_L5	USA	2016/2018		genomic DNA	PBMC	603_Q12_L5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189533	603_Q12_L6	USA	2016/2018		genomic DNA	PBMC	603_Q12_L6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189534	603_Q12_L7	USA	2016/2018		genomic DNA	PBMC	603_Q12_L7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189535	603_Q12_L9	USA	2016/2018		genomic DNA	PBMC	603_Q12_L9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189537	603_Q12_M20	USA	2016/2018		genomic DNA	PBMC	603_Q12_M20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189536	603_Q12_M5	USA	2016/2018		genomic DNA	PBMC	603_Q12_M5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189538	603_Q12_O10	USA	2016/2018		genomic DNA	PBMC	603_Q12_O10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189539	603_Q12_P10	USA	2016/2018		genomic DNA	PBMC	603_Q12_P10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189540	603_Q12_P23	USA	2016/2018		genomic DNA	PBMC	603_Q12_P23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189541	603_Q12_P6	USA	2016/2018		genomic DNA	PBMC	603_Q12_P6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189543	603_Q13_B20	USA	2016/2018		genomic DNA	PBMC	603_Q13_B20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189544	603_Q13_D7	USA	2016/2018		genomic DNA	PBMC	603_Q13_D7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189545	603_Q13_E4	USA	2016/2018		genomic DNA	PBMC	603_Q13_E4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189546	603_Q13_F13	USA	2016/2018		genomic DNA	PBMC	603_Q13_F13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189548	603_Q13_F22	USA	2016/2018		genomic DNA	PBMC	603_Q13_F22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189549	603_Q13_G15	USA	2016/2018		genomic DNA	PBMC	603_Q13_G15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189550	603_Q13_G16	USA	2016/2018		genomic DNA	PBMC	603_Q13_G16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189551	603_Q13_G4	USA	2016/2018		genomic DNA	PBMC	603_Q13_G4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,178T,230I
MT189553	603_Q13_I20	USA	2016/2018		genomic DNA	PBMC	603_Q13_I20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189555	603_Q13_J9	USA	2016/2018		genomic DNA	PBMC	603_Q13_J9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189895	603_Q13_K13	USA	2016/2018		genomic DNA	PBMC	603_Q13_K13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6L,83L,116A,120S,180D,230I
MT189556	603_Q13_K9	USA	2016/2018		genomic DNA	PBMC	603_Q13_K9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189557	603_Q13_L21	USA	2016/2018		genomic DNA	PBMC	603_Q13_L21HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189896	603_Q14_A23	USA	2016/2018		genomic DNA	PBMC	603_Q14_A23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6L,83L,116A,120S,230I
MT189558	603_Q14_A3	USA	2016/2018		genomic DNA	PBMC	603_Q14_A3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189560	603_Q14_B13	USA	2016/2018		genomic DNA	PBMC	603_Q14_B13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	228	6L,83L,116A,120S,180D,228P
MT189559	603_Q14_B16	USA	2016/2018		genomic DNA	PBMC	603_Q14_B16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189561	603_Q14_B21	USA	2016/2018		genomic DNA	PBMC	603_Q14_B21HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189563	603_Q14_E16	USA	2016/2018		genomic DNA	PBMC	603_Q14_E16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116T,120S,180D,230I
MT189564	603_Q14_E23	USA	2016/2018		genomic DNA	PBMC	603_Q14_E23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189565	603_Q14_G13	USA	2016/2018		genomic DNA	PBMC	603_Q14_G13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189566	603_Q14_H16	USA	2016/2018		genomic DNA	PBMC	603_Q14_H16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189567	603_Q14_I10	USA	2016/2018		genomic DNA	PBMC	603_Q14_I10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189568	603_Q14_I16	USA	2016/2018		genomic DNA	PBMC	603_Q14_I16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT191012	603_Q14_I19	USA	2016/2018		genomic DNA	PBMC	603_Q14_I19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,83L,116A,120S,180D,230I
MT189569	603_Q14_I8	USA	2016/2018		genomic DNA	PBMC	603_Q14_I8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189572	603_Q14_J2	USA	2016/2018		genomic DNA	PBMC	603_Q14_J2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT191013	603_Q14_K11	USA	2016/2018		genomic DNA	PBMC	603_Q14_K11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,83L,116A,120S,178T,229K,230I
MT189571	603_Q14_K12	USA	2016/2018		genomic DNA	PBMC	603_Q14_K12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189573	603_Q14_K13	USA	2016/2018		genomic DNA	PBMC	603_Q14_K13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,230I
MT189574	603_Q14_K20	USA	2016/2018		genomic DNA	PBMC	603_Q14_K20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189575	603_Q14_K6	USA	2016/2018		genomic DNA	PBMC	603_Q14_K6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189576	603_Q14_L22	USA	2016/2018		genomic DNA	PBMC	603_Q14_L22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189897	603_Q14_O19	USA	2016/2018		genomic DNA	PBMC	603_Q14_O19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6L,83L,116A,120S,180D,230I
MT189577	603_Q14_O23	USA	2016/2018		genomic DNA	PBMC	603_Q14_O23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189898	603_Q14_P2	USA	2016/2018		genomic DNA	PBMC	603_Q14_P2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6L,83L,116A,120S,180D,230I
MT189578	603_Q14_P3	USA	2016/2018		genomic DNA	PBMC	603_Q14_P3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	211	6L,76K,83L,97K,116A,120S,133*,175K,180N,184*,208E,209K,211R
MT189579	603_Q14_P4	USA	2016/2018		genomic DNA	PBMC	603_Q14_P4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189580	603_Q14_P5	USA	2016/2018		genomic DNA	PBMC	603_Q14_P5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189583	603_Q15_C1	USA	2016/2018		genomic DNA	PBMC	603_Q15_C1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189581	603_Q15_C12	USA	2016/2018		genomic DNA	PBMC	603_Q15_C12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189582	603_Q15_C16	USA	2016/2018		genomic DNA	PBMC	603_Q15_C16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189584	603_Q15_C23	USA	2016/2018		genomic DNA	PBMC	603_Q15_C23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189585	603_Q15_D10	USA	2016/2018		genomic DNA	PBMC	603_Q15_D10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189586	603_Q15_D15	USA	2016/2018		genomic DNA	PBMC	603_Q15_D15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189899	603_Q15_D20	USA	2016/2018		genomic DNA	PBMC	603_Q15_D20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6L,83L,116A,120S,178T,180D,230I
MT189587	603_Q15_E8	USA	2016/2018		genomic DNA	PBMC	603_Q15_E8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189588	603_Q15_F15	USA	2016/2018		genomic DNA	PBMC	603_Q15_F15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189589	603_Q15_H14	USA	2016/2018		genomic DNA	PBMC	603_Q15_H14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189590	603_Q15_I4	USA	2016/2018		genomic DNA	PBMC	603_Q15_I4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,178T,230I
MT189591	603_Q15_J24	USA	2016/2018		genomic DNA	PBMC	603_Q15_J24HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189592	603_Q15_J9	USA	2016/2018		genomic DNA	PBMC	603_Q15_J9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189593	603_Q15_L10	USA	2016/2018		genomic DNA	PBMC	603_Q15_L10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,23*,80*,83L,106R,116A,117*,120S,180D,184*,230I
MT189594	603_Q15_M13	USA	2016/2018		genomic DNA	PBMC	603_Q15_M13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	229	6L,83L,116A,120S,222A,223D,224E,225V,226E,229T
MT189595	603_Q15_N12	USA	2016/2018		genomic DNA	PBMC	603_Q15_N12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189597	603_Q15_P15	USA	2016/2018		genomic DNA	PBMC	603_Q15_P15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189598	603_Q16_A2	USA	2016/2018		genomic DNA	PBMC	603_Q16_A2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189599	603_Q16_B4	USA	2016/2018		genomic DNA	PBMC	603_Q16_B4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189600	603_Q16_B8	USA	2016/2018		genomic DNA	PBMC	603_Q16_B8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189601	603_Q16_C15	USA	2016/2018		genomic DNA	PBMC	603_Q16_C15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189602	603_Q16_E10	USA	2016/2018		genomic DNA	PBMC	603_Q16_E10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189900	603_Q16_E19	USA	2016/2018		genomic DNA	PBMC	603_Q16_E19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6L,83L,116A,120S,180D,230I
MT189603	603_Q16_E6	USA	2016/2018		genomic DNA	PBMC	603_Q16_E6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189604	603_Q16_F21	USA	2016/2018		genomic DNA	PBMC	603_Q16_F21HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,230I
MT189605	603_Q16_G6	USA	2016/2018		genomic DNA	PBMC	603_Q16_G6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189606	603_Q16_H1	USA	2016/2018		genomic DNA	PBMC	603_Q16_H1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189607	603_Q16_H21	USA	2016/2018		genomic DNA	PBMC	603_Q16_H21HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189608	603_Q16_I1	USA	2016/2018		genomic DNA	PBMC	603_Q16_I1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,75K,78V,81N,83L,101R,113K,116A,118I,120S,127E,132K,133*,143K,173K,175K,181I,184*,214I,215I,223E,229K,230I
MT189610	603_Q16_I2	USA	2016/2018		genomic DNA	PBMC	603_Q16_I2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT191014	603_Q16_J18	USA	2016/2018		genomic DNA	PBMC	603_Q16_J18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,83L,116A,120S,178T,230I
MT189609	603_Q16_J24	USA	2016/2018		genomic DNA	PBMC	603_Q16_J24HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189611	603_Q16_K12	USA	2016/2018		genomic DNA	PBMC	603_Q16_K12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189612	603_Q16_L16	USA	2016/2018		genomic DNA	PBMC	603_Q16_L16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,178T,180D,230I
MT189613	603_Q16_L9	USA	2016/2018		genomic DNA	PBMC	603_Q16_L9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,178T,230I
MT189614	603_Q16_N10	USA	2016/2018		genomic DNA	PBMC	603_Q16_N10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189615	603_Q16_P24	USA	2016/2018		genomic DNA	PBMC	603_Q16_P24HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189616	603_Q17_A10	USA	2016/2018		genomic DNA	PBMC	603_Q17_A10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189617	603_Q17_A18	USA	2016/2018		genomic DNA	PBMC	603_Q17_A18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189618	603_Q17_A21	USA	2016/2018		genomic DNA	PBMC	603_Q17_A21HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189619	603_Q17_A8	USA	2016/2018		genomic DNA	PBMC	603_Q17_A8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189620	603_Q17_E4	USA	2016/2018		genomic DNA	PBMC	603_Q17_E4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189622	603_Q17_G18	USA	2016/2018		genomic DNA	PBMC	603_Q17_G18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,178T,230I
MT189623	603_Q17_G19	USA	2016/2018		genomic DNA	PBMC	603_Q17_G19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189624	603_Q17_G21	USA	2016/2018		genomic DNA	PBMC	603_Q17_G21HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189625	603_Q17_G4	USA	2016/2018		genomic DNA	PBMC	603_Q17_G4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189626	603_Q17_I22	USA	2016/2018		genomic DNA	PBMC	603_Q17_I22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189627	603_Q17_I6	USA	2016/2018		genomic DNA	PBMC	603_Q17_I6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189628	603_Q17_J18	USA	2016/2018		genomic DNA	PBMC	603_Q17_J18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189629	603_Q17_J4	USA	2016/2018		genomic DNA	PBMC	603_Q17_J4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	228	6L,83L,116A,120S,180D,228P
MT189630	603_Q17_K7	USA	2016/2018		genomic DNA	PBMC	603_Q17_K7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189631	603_Q17_L13	USA	2016/2018		genomic DNA	PBMC	603_Q17_L13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189632	603_Q17_L14	USA	2016/2018		genomic DNA	PBMC	603_Q17_L14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189633	603_Q17_M11	USA	2016/2018		genomic DNA	PBMC	603_Q17_M11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,230I
MT189634	603_Q17_M2	USA	2016/2018		genomic DNA	PBMC	603_Q17_M2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189635	603_Q17_O19	USA	2016/2018		genomic DNA	PBMC	603_Q17_O19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189637	603_Q17_O23	USA	2016/2018		genomic DNA	PBMC	603_Q17_O23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT191015	603_Q17_O3	USA	2016/2018		genomic DNA	PBMC	603_Q17_O3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,83L,116A,120S,178T,230I
MT189901	603_Q17_P8	USA	2016/2018		genomic DNA	PBMC	603_Q17_P8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6L,78V,83L,116A,120S,230I
MT189636	603_Q18_B12	USA	2016/2018		genomic DNA	PBMC	603_Q18_B12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189638	603_Q18_B3	USA	2016/2018		genomic DNA	PBMC	603_Q18_B3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189639	603_Q18_D16	USA	2016/2018		genomic DNA	PBMC	603_Q18_D16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189902	603_Q18_D5	USA	2016/2018		genomic DNA	PBMC	603_Q18_D5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6L,78V,83L,116A,120S,230I
MT189640	603_Q18_E11	USA	2016/2018		genomic DNA	PBMC	603_Q18_E11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,178T,230I
MT189641	603_Q18_E14	USA	2016/2018		genomic DNA	PBMC	603_Q18_E14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	229	6L,83L,116A,120S,180D,229C
MT189643	603_Q18_F11	USA	2016/2018		genomic DNA	PBMC	603_Q18_F11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189644	603_Q18_F17	USA	2016/2018		genomic DNA	PBMC	603_Q18_F17HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189903	603_Q18_I12	USA	2016/2018		genomic DNA	PBMC	603_Q18_I12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6L,23*,80*,83L,116A,120S,137R,180D,230I
MT191016	603_Q18_K22	USA	2016/2018		genomic DNA	PBMC	603_Q18_K22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,83L,116A,120S,178T,229K,230I
MT189646	603_Q18_M10	USA	2016/2018		genomic DNA	PBMC	603_Q18_M10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189648	603_Q18_M14	USA	2016/2018		genomic DNA	PBMC	603_Q18_M14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,178T,230I
MT189649	603_Q18_O24	USA	2016/2018		genomic DNA	PBMC	603_Q18_O24HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189650	603_Q18_P8	USA	2016/2018		genomic DNA	PBMC	603_Q18_P8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189653	603_Q19_D1	USA	2016/2018		genomic DNA	PBMC	603_Q19_D1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189651	603_Q19_D16	USA	2016/2018		genomic DNA	PBMC	603_Q19_D16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189652	603_Q19_D17	USA	2016/2018		genomic DNA	PBMC	603_Q19_D17HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189654	603_Q19_D20	USA	2016/2018		genomic DNA	PBMC	603_Q19_D20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189655	603_Q19_F16	USA	2016/2018		genomic DNA	PBMC	603_Q19_F16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189656	603_Q19_F2	USA	2016/2018		genomic DNA	PBMC	603_Q19_F2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189657	603_Q19_F6	USA	2016/2018		genomic DNA	PBMC	603_Q19_F6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189658	603_Q19_G10	USA	2016/2018		genomic DNA	PBMC	603_Q19_G10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189659	603_Q19_H6	USA	2016/2018		genomic DNA	PBMC	603_Q19_H6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189660	603_Q19_I21	USA	2016/2018		genomic DNA	PBMC	603_Q19_I21HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189661	603_Q19_J11	USA	2016/2018		genomic DNA	PBMC	603_Q19_J11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189662	603_Q19_L4	USA	2016/2018		genomic DNA	PBMC	603_Q19_L4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189663	603_Q19_M13	USA	2016/2018		genomic DNA	PBMC	603_Q19_M13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189664	603_Q19_M22	USA	2016/2018		genomic DNA	PBMC	603_Q19_M22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,178T,230I
MT189665	603_Q19_M9	USA	2016/2018		genomic DNA	PBMC	603_Q19_M9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189666	603_Q19_N11	USA	2016/2018		genomic DNA	PBMC	603_Q19_N11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189667	603_Q2_D20	USA	2016/2018		genomic DNA	PBMC	603_Q2_D20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189668	603_Q2_D22	USA	2016/2018		genomic DNA	PBMC	603_Q2_D22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189669	603_Q2_F7	USA	2016/2018		genomic DNA	PBMC	603_Q2_F7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189671	603_Q2_H10	USA	2016/2018		genomic DNA	PBMC	603_Q2_H10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,161V,180D,230I
MT189670	603_Q2_K6	USA	2016/2018		genomic DNA	PBMC	603_Q2_K6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189672	603_Q2_L1	USA	2016/2018		genomic DNA	PBMC	603_Q2_L1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189674	603_Q2_P10	USA	2016/2018		genomic DNA	PBMC	603_Q2_P10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189673	603_Q2_P21	USA	2016/2018		genomic DNA	PBMC	603_Q2_P21HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189675	603_Q20_A9	USA	2016/2018		genomic DNA	PBMC	603_Q20_A9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189677	603_Q20_B22	USA	2016/2018		genomic DNA	PBMC	603_Q20_B22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189678	603_Q20_B6	USA	2016/2018		genomic DNA	PBMC	603_Q20_B6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189680	603_Q20_E15	USA	2016/2018		genomic DNA	PBMC	603_Q20_E15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189681	603_Q20_O11	USA	2016/2018		genomic DNA	PBMC	603_Q20_O11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189867	603_Q21_A20	USA	2016/2018		genomic DNA	PBMC	603_Q21_A20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6L,53T,83L,116A,120S,178T,230I
MT189682	603_Q21_A6	USA	2016/2018		genomic DNA	PBMC	603_Q21_A6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189684	603_Q21_B10	USA	2016/2018		genomic DNA	PBMC	603_Q21_B10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189908	603_Q21_C1	USA	2016/2018		genomic DNA	PBMC	603_Q21_C1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6L,83L,116A,120S,180D,230I
MT189685	603_Q21_D1	USA	2016/2018		genomic DNA	PBMC	603_Q21_D1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189683	603_Q21_D19	USA	2016/2018		genomic DNA	PBMC	603_Q21_D19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189687	603_Q21_E20	USA	2016/2018		genomic DNA	PBMC	603_Q21_E20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189689	603_Q21_E24	USA	2016/2018		genomic DNA	PBMC	603_Q21_E24HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189688	603_Q21_F12	USA	2016/2018		genomic DNA	PBMC	603_Q21_F12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189690	603_Q21_F2	USA	2016/2018		genomic DNA	PBMC	603_Q21_F2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189691	603_Q21_H1	USA	2016/2018		genomic DNA	PBMC	603_Q21_H1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189692	603_Q21_H4	USA	2016/2018		genomic DNA	PBMC	603_Q21_H4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189693	603_Q21_I14	USA	2016/2018		genomic DNA	PBMC	603_Q21_I14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189695	603_Q21_K9	USA	2016/2018		genomic DNA	PBMC	603_Q21_K9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189694	603_Q21_L13	USA	2016/2018		genomic DNA	PBMC	603_Q21_L13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189696	603_Q21_L23	USA	2016/2018		genomic DNA	PBMC	603_Q21_L23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189698	603_Q21_O1	USA	2016/2018		genomic DNA	PBMC	603_Q21_O1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189697	603_Q21_O16	USA	2016/2018		genomic DNA	PBMC	603_Q21_O16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189699	603_Q21_O6	USA	2016/2018		genomic DNA	PBMC	603_Q21_O6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189909	603_Q22_C11	USA	2016/2018		genomic DNA	PBMC	603_Q22_C11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189700	603_Q22_D19	USA	2016/2018		genomic DNA	PBMC	603_Q22_D19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189701	603_Q22_E11	USA	2016/2018		genomic DNA	PBMC	603_Q22_E11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189702	603_Q22_E2	USA	2016/2018		genomic DNA	PBMC	603_Q22_E2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189705	603_Q22_G22	USA	2016/2018		genomic DNA	PBMC	603_Q22_G22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189704	603_Q22_J20	USA	2016/2018		genomic DNA	PBMC	603_Q22_J20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189707	603_Q22_L7	USA	2016/2018		genomic DNA	PBMC	603_Q22_L7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189708	603_Q22_M7	USA	2016/2018		genomic DNA	PBMC	603_Q22_M7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189710	603_Q22_O6	USA	2016/2018		genomic DNA	PBMC	603_Q22_O6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189911	603_Q22_P11	USA	2016/2018		genomic DNA	PBMC	603_Q22_P11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6L,83L,116A,120S,180D,230I
MT189711	603_Q23_A13	USA	2016/2018		genomic DNA	PBMC	603_Q23_A13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189712	603_Q23_B11	USA	2016/2018		genomic DNA	PBMC	603_Q23_B11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,178T,230I
MT189713	603_Q23_B17	USA	2016/2018		genomic DNA	PBMC	603_Q23_B17HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189714	603_Q23_B9	USA	2016/2018		genomic DNA	PBMC	603_Q23_B9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,178T,230I
MT189715	603_Q23_C2	USA	2016/2018		genomic DNA	PBMC	603_Q23_C2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189716	603_Q23_E14	USA	2016/2018		genomic DNA	PBMC	603_Q23_E14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189717	603_Q23_E9	USA	2016/2018		genomic DNA	PBMC	603_Q23_E9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189718	603_Q23_G14	USA	2016/2018		genomic DNA	PBMC	603_Q23_G14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189719	603_Q23_G2	USA	2016/2018		genomic DNA	PBMC	603_Q23_G2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189720	603_Q23_G3	USA	2016/2018		genomic DNA	PBMC	603_Q23_G3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,78V,83L,116A,120S,230I
MT189721	603_Q23_G8	USA	2016/2018		genomic DNA	PBMC	603_Q23_G8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189722	603_Q23_H10	USA	2016/2018		genomic DNA	PBMC	603_Q23_H10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189723	603_Q23_H11	USA	2016/2018		genomic DNA	PBMC	603_Q23_H11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189724	603_Q23_H20	USA	2016/2018		genomic DNA	PBMC	603_Q23_H20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,230I
MT189725	603_Q23_K21	USA	2016/2018		genomic DNA	PBMC	603_Q23_K21HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189728	603_Q23_O1	USA	2016/2018		genomic DNA	PBMC	603_Q23_O1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189727	603_Q23_O10	USA	2016/2018		genomic DNA	PBMC	603_Q23_O10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189729	603_Q23_P10	USA	2016/2018		genomic DNA	PBMC	603_Q23_P10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189731	603_Q23_P9	USA	2016/2018		genomic DNA	PBMC	603_Q23_P9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189730	603_Q24_A3	USA	2016/2018		genomic DNA	PBMC	603_Q24_A3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189733	603_Q24_C7	USA	2016/2018		genomic DNA	PBMC	603_Q24_C7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189734	603_Q24_D11	USA	2016/2018		genomic DNA	PBMC	603_Q24_D11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189735	603_Q24_F6	USA	2016/2018		genomic DNA	PBMC	603_Q24_F6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189736	603_Q24_G5	USA	2016/2018		genomic DNA	PBMC	603_Q24_G5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189737	603_Q24_H19	USA	2016/2018		genomic DNA	PBMC	603_Q24_H19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189739	603_Q24_H6	USA	2016/2018		genomic DNA	PBMC	603_Q24_H6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189738	603_Q24_I4	USA	2016/2018		genomic DNA	PBMC	603_Q24_I4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189740	603_Q24_J13	USA	2016/2018		genomic DNA	PBMC	603_Q24_J13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189741	603_Q24_J19	USA	2016/2018		genomic DNA	PBMC	603_Q24_J19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189742	603_Q24_L8	USA	2016/2018		genomic DNA	PBMC	603_Q24_L8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189743	603_Q24_M1	USA	2016/2018		genomic DNA	PBMC	603_Q24_M1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189744	603_Q24_M7	USA	2016/2018		genomic DNA	PBMC	603_Q24_M7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189745	603_Q24_P11	USA	2016/2018		genomic DNA	PBMC	603_Q24_P11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189746	603_Q25_A2	USA	2016/2018		genomic DNA	PBMC	603_Q25_A2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,35K,46E,76K,80*,83L,96I,116A,117*,120S,127E,132K,133*,152N,159K,162K,163N,180N,184*,213K,215I,220E,222E,223E,230I
MT189747	603_Q25_B16	USA	2016/2018		genomic DNA	PBMC	603_Q25_B16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189748	603_Q25_C18	USA	2016/2018		genomic DNA	PBMC	603_Q25_C18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189749	603_Q25_D11	USA	2016/2018		genomic DNA	PBMC	603_Q25_D11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,23*,83L,106R,116A,117*,120S,230I
MT189750	603_Q25_E23	USA	2016/2018		genomic DNA	PBMC	603_Q25_E23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189752	603_Q25_I6	USA	2016/2018		genomic DNA	PBMC	603_Q25_I6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,178T,230I
MT189753	603_Q25_K11	USA	2016/2018		genomic DNA	PBMC	603_Q25_K11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189754	603_Q25_K9	USA	2016/2018		genomic DNA	PBMC	603_Q25_K9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT191017	603_Q25_L5	USA	2016/2018		genomic DNA	PBMC	603_Q25_L5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,83L,116A,120S,178T,230I
MT189755	603_Q25_M12	USA	2016/2018		genomic DNA	PBMC	603_Q25_M12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189756	603_Q25_M24	USA	2016/2018		genomic DNA	PBMC	603_Q25_M24HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189757	603_Q25_P23	USA	2016/2018		genomic DNA	PBMC	603_Q25_P23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189758	603_Q3_A14	USA	2016/2018		genomic DNA	PBMC	603_Q3_A14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189759	603_Q3_B11	USA	2016/2018		genomic DNA	PBMC	603_Q3_B11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189760	603_Q3_D18	USA	2016/2018		genomic DNA	PBMC	603_Q3_D18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189761	603_Q3_G7	USA	2016/2018		genomic DNA	PBMC	603_Q3_G7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189762	603_Q3_H5	USA	2016/2018		genomic DNA	PBMC	603_Q3_H5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189857	603_Q3_H9	USA	2016/2018		genomic DNA	PBMC	603_Q3_H9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (msd_mutation)	1	231	6L,83L,116A,120S,178T,230I
MT189763	603_Q3_I21	USA	2016/2018		genomic DNA	PBMC	603_Q3_I21HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189764	603_Q3_J17	USA	2016/2018		genomic DNA	PBMC	603_Q3_J17HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189868	603_Q3_K13	USA	2016/2018		genomic DNA	PBMC	603_Q3_K13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6L,83L,116A,120S,230I
MT189765	603_Q3_K6	USA	2016/2018		genomic DNA	PBMC	603_Q3_K6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	228	6L,83L,116A,120S,180D,228P
MT189766	603_Q3_L2	USA	2016/2018		genomic DNA	PBMC	603_Q3_L2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189767	603_Q4_F20	USA	2016/2018		genomic DNA	PBMC	603_Q4_F20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189919	603_Q4_G16	USA	2016/2018		genomic DNA	PBMC	603_Q4_G16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189768	603_Q4_I19	USA	2016/2018		genomic DNA	PBMC	603_Q4_I19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189769	603_Q4_I6	USA	2016/2018		genomic DNA	PBMC	603_Q4_I6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189770	603_Q4_J14	USA	2016/2018		genomic DNA	PBMC	603_Q4_J14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189771	603_Q4_K5	USA	2016/2018		genomic DNA	PBMC	603_Q4_K5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189772	603_Q4_M17	USA	2016/2018		genomic DNA	PBMC	603_Q4_M17HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189773	603_Q4_M3	USA	2016/2018		genomic DNA	PBMC	603_Q4_M3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	217	6L,83L,116A,120S,178T,217E
MT189774	603_Q4_O6	USA	2016/2018		genomic DNA	PBMC	603_Q4_O6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189775	603_Q4_P15	USA	2016/2018		genomic DNA	PBMC	603_Q4_P15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,129L,180D,230I
MT189776	603_Q5_C9	USA	2016/2018		genomic DNA	PBMC	603_Q5_C9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,23*,80*,83L,116A,120S,137R,156R,180D,184*,222R,230I
MT189870	603_Q5_D17	USA	2016/2018		genomic DNA	PBMC	603_Q5_D17HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189777	603_Q5_E19	USA	2016/2018		genomic DNA	PBMC	603_Q5_E19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189778	603_Q5_E24	USA	2016/2018		genomic DNA	PBMC	603_Q5_E24HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189872	603_Q5_H15	USA	2016/2018		genomic DNA	PBMC	603_Q5_H15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6L,83L,116A,120S,180D,230I
MT189779	603_Q5_I10	USA	2016/2018		genomic DNA	PBMC	603_Q5_I10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189780	603_Q5_J6	USA	2016/2018		genomic DNA	PBMC	603_Q5_J6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,230I
MT189781	603_Q5_L23	USA	2016/2018		genomic DNA	PBMC	603_Q5_L23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,230I
MT189782	603_Q5_P14	USA	2016/2018		genomic DNA	PBMC	603_Q5_P14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,178T,230I
MT189874	603_Q6_A8	USA	2016/2018		genomic DNA	PBMC	603_Q6_A8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6L,83L,116A,120S,180D,230I
MT189876	603_Q6_B16	USA	2016/2018		genomic DNA	PBMC	603_Q6_B16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6L,83L,116A,120S,180D,230I
MT189784	603_Q6_C15	USA	2016/2018		genomic DNA	PBMC	603_Q6_C15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189785	603_Q6_D4	USA	2016/2018		genomic DNA	PBMC	603_Q6_D4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189786	603_Q6_E18	USA	2016/2018		genomic DNA	PBMC	603_Q6_E18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189787	603_Q6_G17	USA	2016/2018		genomic DNA	PBMC	603_Q6_G17HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189788	603_Q6_G6	USA	2016/2018		genomic DNA	PBMC	603_Q6_G6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189789	603_Q6_I17	USA	2016/2018		genomic DNA	PBMC	603_Q6_I17HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189790	603_Q6_J20	USA	2016/2018		genomic DNA	PBMC	603_Q6_J20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,230I
MT189793	603_Q6_J3	USA	2016/2018		genomic DNA	PBMC	603_Q6_J3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189792	603_Q6_L6	USA	2016/2018		genomic DNA	PBMC	603_Q6_L6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT191018	603_Q6_O16	USA	2016/2018		genomic DNA	PBMC	603_Q6_O16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,83L,116A,120S,178T,230I
MT189794	603_Q7_A22	USA	2016/2018		genomic DNA	PBMC	603_Q7_A22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189795	603_Q7_B10	USA	2016/2018		genomic DNA	PBMC	603_Q7_B10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189796	603_Q7_C13	USA	2016/2018		genomic DNA	PBMC	603_Q7_C13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,178T,230I
MT189878	603_Q7_D21	USA	2016/2018		genomic DNA	PBMC	603_Q7_D21HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6L,83L,116A,120S,178T,229K,230I
MT189798	603_Q7_E24	USA	2016/2018		genomic DNA	PBMC	603_Q7_E24HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189797	603_Q7_N18	USA	2016/2018		genomic DNA	PBMC	603_Q7_N18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189799	603_Q7_O11	USA	2016/2018		genomic DNA	PBMC	603_Q7_O11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189801	603_Q7_O9	USA	2016/2018		genomic DNA	PBMC	603_Q7_O9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189802	603_Q7_P7	USA	2016/2018		genomic DNA	PBMC	603_Q7_P7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189803	603_Q8_A17	USA	2016/2018		genomic DNA	PBMC	603_Q8_A17HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189804	603_Q8_D12	USA	2016/2018		genomic DNA	PBMC	603_Q8_D12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189805	603_Q8_E22	USA	2016/2018		genomic DNA	PBMC	603_Q8_E22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,78V,83L,116A,120S,230I
MT189806	603_Q8_F10	USA	2016/2018		genomic DNA	PBMC	603_Q8_F10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189807	603_Q8_J22	USA	2016/2018		genomic DNA	PBMC	603_Q8_J22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189808	603_Q8_J8	USA	2016/2018		genomic DNA	PBMC	603_Q8_J8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189809	603_Q8_K11	USA	2016/2018		genomic DNA	PBMC	603_Q8_K11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189810	603_Q8_M12	USA	2016/2018		genomic DNA	PBMC	603_Q8_M12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189811	603_Q8_M19	USA	2016/2018		genomic DNA	PBMC	603_Q8_M19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189812	603_Q8_M24	USA	2016/2018		genomic DNA	PBMC	603_Q8_M24HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189813	603_Q8_N21	USA	2016/2018		genomic DNA	PBMC	603_Q8_N21HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189814	603_Q8_P17	USA	2016/2018		genomic DNA	PBMC	603_Q8_P17HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,78V,83L,116A,120S,230I
MT189815	603_Q8_P18	USA	2016/2018		genomic DNA	PBMC	603_Q8_P18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,229K,230I
MT189816	603_Q8_P2	USA	2016/2018		genomic DNA	PBMC	603_Q8_P2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189817	603_Q9_B3	USA	2016/2018		genomic DNA	PBMC	603_Q9_B3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189818	603_Q9_C9	USA	2016/2018		genomic DNA	PBMC	603_Q9_C9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189819	603_Q9_E11	USA	2016/2018		genomic DNA	PBMC	603_Q9_E11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189820	603_Q9_H12	USA	2016/2018		genomic DNA	PBMC	603_Q9_H12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189822	603_Q9_I1	USA	2016/2018		genomic DNA	PBMC	603_Q9_I1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189821	603_Q9_K15	USA	2016/2018		genomic DNA	PBMC	603_Q9_K15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189823	603_Q9_K18	USA	2016/2018		genomic DNA	PBMC	603_Q9_K18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,26E,29K,83L,116A,120S,180D,230I
MT189825	603_SEB_AIM_D15	USA	2016/2018		genomic DNA	PBMC	603_SEB_AIM_D15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189824	603_SEB_AIM_D22	USA	2016/2018		genomic DNA	PBMC	603_SEB_AIM_D22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189826	603_SEB_AIM_F13	USA	2016/2018		genomic DNA	PBMC	603_SEB_AIM_F13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,178T,180D,230I
MT189827	603_SEB_AIMPl2_C4	USA	2016/2018		genomic DNA	PBMC	603_SEB_AIMPl2_C4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189828	603_SEB_AIMPl2_E3	USA	2016/2018		genomic DNA	PBMC	603_SEB_AIMPl2_E3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189829	603_SEB_CD69_A13	USA	2016/2018		genomic DNA	PBMC	603_SEB_CD69_A13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189832	603_SEB_CD69_B18	USA	2016/2018		genomic DNA	PBMC	603_SEB_CD69_B18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189831	603_SEB_CD69_B19	USA	2016/2018		genomic DNA	PBMC	603_SEB_CD69_B19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189833	603_SEB_CD69_B20	USA	2016/2018		genomic DNA	PBMC	603_SEB_CD69_B20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189834	603_SEB_CD69_D19	USA	2016/2018		genomic DNA	PBMC	603_SEB_CD69_D19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189836	603_SEB_CD69_E16	USA	2016/2018		genomic DNA	PBMC	603_SEB_CD69_E16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189835	603_SEB_CD69_G21	USA	2016/2018		genomic DNA	PBMC	603_SEB_CD69_G21HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189837	603_SEB_CD69_J7	USA	2016/2018		genomic DNA	PBMC	603_SEB_CD69_J7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189838	603_SEB_CD69_O18	USA	2016/2018		genomic DNA	PBMC	603_SEB_CD69_O18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,178T,230I
MT189839	603_SEB_NEG_A24	USA	2016/2018		genomic DNA	PBMC	603_SEB_NEG_A24HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189840	603_SEB_NEG_A9	USA	2016/2018		genomic DNA	PBMC	603_SEB_NEG_A9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189842	603_SEB_NEG_B5	USA	2016/2018		genomic DNA	PBMC	603_SEB_NEG_B5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189841	603_SEB_NEG_C17	USA	2016/2018		genomic DNA	PBMC	603_SEB_NEG_C17HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189914	603_SEB_NEG_C2	USA	2016/2018		genomic DNA	PBMC	603_SEB_NEG_C2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189843	603_SEB_NEG_C23	USA	2016/2018		genomic DNA	PBMC	603_SEB_NEG_C23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189844	603_SEB_NEG_C9	USA	2016/2018		genomic DNA	PBMC	603_SEB_NEG_C9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189845	603_SEB_NEG_D1	USA	2016/2018		genomic DNA	PBMC	603_SEB_NEG_D1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189846	603_SEB_NEG_E12	USA	2016/2018		genomic DNA	PBMC	603_SEB_NEG_E12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189847	603_SEB_NEG_E14	USA	2016/2018		genomic DNA	PBMC	603_SEB_NEG_E14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189848	603_SEB_NEG_F2	USA	2016/2018		genomic DNA	PBMC	603_SEB_NEG_F2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189849	603_SEB_NEG_J3	USA	2016/2018		genomic DNA	PBMC	603_SEB_NEG_J3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189869	603_SEB_NEG_K3	USA	2016/2018		genomic DNA	PBMC	603_SEB_NEG_K3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6L,83L,116A,120S,178T,230I
MT189850	603_SEB_NEG_L10	USA	2016/2018		genomic DNA	PBMC	603_SEB_NEG_L10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189851	603_SEB_NEG_L8	USA	2016/2018		genomic DNA	PBMC	603_SEB_NEG_L8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189852	603_SEB_NEG_M16	USA	2016/2018		genomic DNA	PBMC	603_SEB_NEG_M16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189854	603_SEB_NEG_M5	USA	2016/2018		genomic DNA	PBMC	603_SEB_NEG_M5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,80*,83L,100K,116A,120S,137R,180D,184*,230I
MT189853	603_SEB_NEG_M6	USA	2016/2018		genomic DNA	PBMC	603_SEB_NEG_M6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189855	603_SEB_NEG_M7	USA	2016/2018		genomic DNA	PBMC	603_SEB_NEG_M7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT189856	603_SEB_NEG_P20	USA	2016/2018		genomic DNA	PBMC	603_SEB_NEG_P20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,116A,120S,180D,230I
MT191019	603_SEB_NEG_P23	USA	2016/2018		genomic DNA	PBMC	603_SEB_NEG_P23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,83L,116A,120S,178T,229K,230I
MT189928	605_CMV_AIM_E24	USA	2016/2018		genomic DNA	PBMC	605_CMV_AIM_E24HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT189931	605_CMV_AIM_E4	USA	2016/2018		genomic DNA	PBMC	605_CMV_AIM_E4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6L,8R,10I,23*,60R,80*,83L,91V,97K,100K,106R,110N,116A,117*,120S,133*,137R,144I,148I,156S,162K,184*,200N,206S,225S
MT191020	605_CMV_AIM_E9	USA	2016/2018		genomic DNA	PBMC	605_CMV_AIM_E9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	4R,6L,86A,91V,112D,116A,148I,178T,200N,208G,225S
MT189933	605_CMV_AIMPl2_C6	USA	2016/2018		genomic DNA	PBMC	605_CMV_AIMPl2_C6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT189935	605_CMV_AIMPl2_D6	USA	2016/2018		genomic DNA	PBMC	605_CMV_AIMPl2_D6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT189936	605_CMV_AIMPl2_M21	USA	2016/2018		genomic DNA	PBMC	605_CMV_AIMPl2_M21HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT189938	605_CMV_CD69_P7	USA	2016/2018		genomic DNA	PBMC	605_CMV_CD69_P7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT189940	605_CMV_NEGPl2_J9	USA	2016/2018		genomic DNA	PBMC	605_CMV_NEGPl2_J9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT189942	605_GAG_NEG_A2	USA	2016/2018		genomic DNA	PBMC	605_GAG_NEG_A2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT189943	605_GAG_NEG_B14	USA	2016/2018		genomic DNA	PBMC	605_GAG_NEG_B14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT189946	605_GAG_NEGPl2_J14	USA	2016/2018		genomic DNA	PBMC	605_GAG_NEGPl2_J14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,214I,225S
MT191021	605_MOG_O14	USA	2016/2018		genomic DNA	PBMC	605_MOG_O14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	4R,6L,86A,91V,112E,116A,148I,178T,200N,208G,225S
MT189948	605_MOGPl2_F9	USA	2016/2018		genomic DNA	PBMC	605_MOGPl2_F9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT189950	605_MOGPl2_I9	USA	2016/2018		genomic DNA	PBMC	605_MOGPl2_I9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT189952	605_Q1_A4	USA	2016/2018		genomic DNA	PBMC	605_Q1_A4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT189954	605_Q1_C4	USA	2016/2018		genomic DNA	PBMC	605_Q1_C4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT189956	605_Q1_C9	USA	2016/2018		genomic DNA	PBMC	605_Q1_C9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT189958	605_Q1_E19	USA	2016/2018		genomic DNA	PBMC	605_Q1_E19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT189920	605_Q1_K13	USA	2016/2018		genomic DNA	PBMC	605_Q1_K13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,91V,116A,148I,178T,200N,225S
MT189959	605_Q1_O4	USA	2016/2018		genomic DNA	PBMC	605_Q1_O4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	12	231	12P,13E,14E,17R,19R,20T,21R,22L,23A,24K,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT189960	605_Q10_F6	USA	2016/2018		genomic DNA	PBMC	605_Q10_F6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT189961	605_Q10_L17	USA	2016/2018		genomic DNA	PBMC	605_Q10_L17HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT189962	605_Q11_C23	USA	2016/2018		genomic DNA	PBMC	605_Q11_C23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT189963	605_Q11_G2	USA	2016/2018		genomic DNA	PBMC	605_Q11_G2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT189964	605_Q11_L23	USA	2016/2018		genomic DNA	PBMC	605_Q11_L23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT189965	605_Q12_B6	USA	2016/2018		genomic DNA	PBMC	605_Q12_B6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	4R,6L,8R,23*,82K,86A,91V,112D,115V,116A,120S,127R,148I,177T,178T,200N,208G,223R,225S
MT189966	605_Q12_F23	USA	2016/2018		genomic DNA	PBMC	605_Q12_F23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT189967	605_Q12_I17	USA	2016/2018		genomic DNA	PBMC	605_Q12_I17HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT189968	605_Q12_P20	USA	2016/2018		genomic DNA	PBMC	605_Q12_P20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT189921	605_Q12_P23	USA	2016/2018		genomic DNA	PBMC	605_Q12_P23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	4R,6L,83M,91V,115L,116A,121D,148I,178T,200N,225S
MT189970	605_Q13_K24	USA	2016/2018		genomic DNA	PBMC	605_Q13_K24HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT191022	605_Q14_F14	USA	2016/2018		genomic DNA	PBMC	605_Q14_F14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	4R,6L,86A,91V,112E,116A,148I,178T,200N,208G,225S
MT189922	605_Q14_F24	USA	2016/2018		genomic DNA	PBMC	605_Q14_F24HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	4R,6L,83M,91V,115L,116A,121D,148I,178T,200N,225S
MT189969	605_Q14_K6	USA	2016/2018		genomic DNA	PBMC	605_Q14_K6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT189971	605_Q15_F18	USA	2016/2018		genomic DNA	PBMC	605_Q15_F18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	4R,6L,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT189973	605_Q15_M12	USA	2016/2018		genomic DNA	PBMC	605_Q15_M12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT191023	605_Q15_M16	USA	2016/2018		genomic DNA	PBMC	605_Q15_M16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	4R,6L,86A,91V,112D,116A,148I,178T,200N,225S
MT189974	605_Q15_P23	USA	2016/2018		genomic DNA	PBMC	605_Q15_P23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT189975	605_Q16_J16	USA	2016/2018		genomic DNA	PBMC	605_Q16_J16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT189976	605_Q17_C11	USA	2016/2018		genomic DNA	PBMC	605_Q17_C11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT189977	605_Q17_K20	USA	2016/2018		genomic DNA	PBMC	605_Q17_K20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT191024	605_Q17_N20	USA	2016/2018		genomic DNA	PBMC	605_Q17_N20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	4R,6L,86A,91V,112D,116A,148I,178T,200N,208G,225S
MT189978	605_Q2_C11	USA	2016/2018		genomic DNA	PBMC	605_Q2_C11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,194E,200N,208G,225S
MT189980	605_Q2_C23	USA	2016/2018		genomic DNA	PBMC	605_Q2_C23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT189923	605_Q2_D11	USA	2016/2018		genomic DNA	PBMC	605_Q2_D11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	4R,6L,23*,71K,86A,91V,98K,101E,112E,116A,118I,132K,133*,148I,178T,200N,208G,214I,223E,225S
MT189990	605_Q2_D21	USA	2016/2018		genomic DNA	PBMC	605_Q2_D21HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6L,83L,91V,110N,116A,120S,148I,178T,200N,225S
MT189979	605_Q3_P12	USA	2016/2018		genomic DNA	PBMC	605_Q3_P12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT189981	605_Q4_B17	USA	2016/2018		genomic DNA	PBMC	605_Q4_B17HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT189972	605_Q4_B2	USA	2016/2018		genomic DNA	PBMC	605_Q4_B2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT189927	605_Q4_C15	USA	2016/2018		genomic DNA	PBMC	605_Q4_C15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	4R,6L,86A,91V,112D,116A,148I,178T,200N,225S
MT189930	605_Q4_C18	USA	2016/2018		genomic DNA	PBMC	605_Q4_C18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT189932	605_Q4_E23	USA	2016/2018		genomic DNA	PBMC	605_Q4_E23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT189924	605_Q5_D15	USA	2016/2018		genomic DNA	PBMC	605_Q5_D15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	4R,6L,86A,91V,112E,116A,148I,178T,200N,208G,225S
MT191025	605_Q5_G21	USA	2016/2018		genomic DNA	PBMC	605_Q5_G21HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	4R,6L,86A,91V,112E,116A,148I,178T,200N,208G,225S
MT189925	605_Q5_H8	USA	2016/2018		genomic DNA	PBMC	605_Q5_H8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	4R,6L,86A,91V,112D,116A,148I,178T,200N,208G,225S
MT189929	605_Q5_O8	USA	2016/2018		genomic DNA	PBMC	605_Q5_O8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT189934	605_Q6_L16	USA	2016/2018		genomic DNA	PBMC	605_Q6_L16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT189926	605_Q6_M10	USA	2016/2018		genomic DNA	PBMC	605_Q6_M10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,91V,110N,116A,148I,178T,200N,225S
MT189937	605_Q6_P7	USA	2016/2018		genomic DNA	PBMC	605_Q6_P7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT191026	605_Q7_B1	USA	2016/2018		genomic DNA	PBMC	605_Q7_B1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	4R,6L,86A,91V,112E,116A,148I,178T,200N,208G,225S
MT189939	605_Q7_J11	USA	2016/2018		genomic DNA	PBMC	605_Q7_J11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT189941	605_Q7_J24	USA	2016/2018		genomic DNA	PBMC	605_Q7_J24HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT189944	605_Q8_F4	USA	2016/2018		genomic DNA	PBMC	605_Q8_F4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT189947	605_Q8_K24	USA	2016/2018		genomic DNA	PBMC	605_Q8_K24HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT191027	605_Q9_D18	USA	2016/2018		genomic DNA	PBMC	605_Q9_D18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,91V,148I,178T,200N,225S
MT189982	605_Q9_G6	USA	2016/2018		genomic DNA	PBMC	605_Q9_G6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,102G,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT189989	605_Q9_N23	USA	2016/2018		genomic DNA	PBMC	605_Q9_N23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6L,83L,91V,110N,116A,148I,178T,200N,225S
MT189984	605_SEB_CD69_F4	USA	2016/2018		genomic DNA	PBMC	605_SEB_CD69_F4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT189987	605_SEB_CD69_L13	USA	2016/2018		genomic DNA	PBMC	605_SEB_CD69_L13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT189988	605_SEB_CD69_N19	USA	2016/2018		genomic DNA	PBMC	605_SEB_CD69_N19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT189945	605_SEB_CD69_O1	USA	2016/2018		genomic DNA	PBMC	605_SEB_CD69_O1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT189949	605_SEB_CD69Pl2_C7	USA	2016/2018		genomic DNA	PBMC	605_SEB_CD69Pl2_C7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT189985	605_SEB_CD69Pl2_I1	USA	2016/2018		genomic DNA	PBMC	605_SEB_CD69Pl2_I1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT189983	605_SEB_CD69Pl2_I14	USA	2016/2018		genomic DNA	PBMC	605_SEB_CD69Pl2_I14HIV-1 isolate from USAquadruplex qPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT189986	605_SEB_CD69Pl2_I8	USA	2016/2018		genomic DNA	PBMC	605_SEB_CD69Pl2_I8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	4R,6L,86A,91V,112D,116A,148I,178T,200N,225S
MT189951	605_SEB_CD69Pl2_K17	USA	2016/2018		genomic DNA	PBMC	605_SEB_CD69Pl2_K17HIV-1 isolate from USAquadruplex qPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT189953	605_SEB_CD69Pl2_P17	USA	2016/2018		genomic DNA	PBMC	605_SEB_CD69Pl2_P17HIV-1 isolate from USAquadruplex qPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT189955	605_SEB_NEG_E12	USA	2016/2018		genomic DNA	PBMC	605_SEB_NEG_E12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,137R,148I,178T,200N,208G,225S
MT189957	605_SEB_NEG_M8	USA	2016/2018		genomic DNA	PBMC	605_SEB_NEG_M8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	24	231	24A,25R,26A,86A,91V,112D,115V,116A,120S,148I,178T,200N,208G,225S
MT190043	9241_CEFT_AIM_J12	USA	2016/2018		genomic DNA	PBMC	9241_CEFT_AIM_J12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190046	9241_CEFT_AIM_K20	USA	2016/2018		genomic DNA	PBMC	9241_CEFT_AIM_K20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,120H,136M,148I,225S
MT190048	9241_CEFT_CD69_A10	USA	2016/2018		genomic DNA	PBMC	9241_CEFT_CD69_A10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190252	9241_CEFT_CD69_B12	USA	2016/2018		genomic DNA	PBMC	9241_CEFT_CD69_B12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,12Y,15L,46R,80*,83L,101R,106R,116R,120H,133*,136M,137R,148I,156R,225S
MT190255	9241_CEFT_CD69_C6	USA	2016/2018		genomic DNA	PBMC	9241_CEFT_CD69_C6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190050	9241_CEFT_CD69_C7	USA	2016/2018		genomic DNA	PBMC	9241_CEFT_CD69_C7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190256	9241_CEFT_CD69_E14	USA	2016/2018		genomic DNA	PBMC	9241_CEFT_CD69_E14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,12Y,15L,46R,80*,83L,101R,106R,116R,120H,133*,136M,137R,148I,156R,225S
MT190317	9241_CEFT_CD69_F1	USA	2016/2018		genomic DNA	PBMC	9241_CEFT_CD69_F1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6H,12Y,15L,23*,80*,83L,100K,106E,117*,120H,136I,148I,184*,212K,225S
MT191074	9241_CEFT_CD69_H9	USA	2016/2018		genomic DNA	PBMC	9241_CEFT_CD69_H9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190052	9241_CEFT_CD69_I6	USA	2016/2018		genomic DNA	PBMC	9241_CEFT_CD69_I6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,136M,148I,225S
MT190262	9241_CEFT_CD69_K4	USA	2016/2018		genomic DNA	PBMC	9241_CEFT_CD69_K4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,12Y,15L,23*,71K,80*,83L,89R,120H,127R,133*,136M,137R,148I,184*,206R,225S
MT190057	9241_CEFT_CD69_L6	USA	2016/2018		genomic DNA	PBMC	9241_CEFT_CD69_L6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT191076	9241_CEFT_CD69_L8	USA	2016/2018		genomic DNA	PBMC	9241_CEFT_CD69_L8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190260	9241_CEFT_CD69_M1	USA	2016/2018		genomic DNA	PBMC	9241_CEFT_CD69_M1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190058	9241_CEFT_CD69_M5	USA	2016/2018		genomic DNA	PBMC	9241_CEFT_CD69_M5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190059	9241_CEFT_CD69_N3	USA	2016/2018		genomic DNA	PBMC	9241_CEFT_CD69_N3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,136M,148I,225S
MT190062	9241_CEFT_CD69_O12	USA	2016/2018		genomic DNA	PBMC	9241_CEFT_CD69_O12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,191I,225S
MT190064	9241_CEFT_CD69_P15	USA	2016/2018		genomic DNA	PBMC	9241_CEFT_CD69_P15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,136M,148I,225S
MT190066	9241_CEFT_NEG_A12	USA	2016/2018		genomic DNA	PBMC	9241_CEFT_NEG_A12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,136M,148I,225S
MT191078	9241_CEFT_NEG_A7	USA	2016/2018		genomic DNA	PBMC	9241_CEFT_NEG_A7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT191080	9241_CEFT_NEG_B22	USA	2016/2018		genomic DNA	PBMC	9241_CEFT_NEG_B22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190068	9241_CEFT_NEG_D10	USA	2016/2018		genomic DNA	PBMC	9241_CEFT_NEG_D10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190263	9241_CEFT_NEG_E14	USA	2016/2018		genomic DNA	PBMC	9241_CEFT_NEG_E14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190072	9241_CEFT_NEG_E6	USA	2016/2018		genomic DNA	PBMC	9241_CEFT_NEG_E6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,91V,136M,148I,225S
MT190074	9241_CEFT_NEG_M1	USA	2016/2018		genomic DNA	PBMC	9241_CEFT_NEG_M1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,136M,148I,225S
MT191082	9241_CEFT_NEG_N15	USA	2016/2018		genomic DNA	PBMC	9241_CEFT_NEG_N15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6H,12Y,15L,83L,136M,148I,225S
MT190076	9241_CEFT_NEG_N3	USA	2016/2018		genomic DNA	PBMC	9241_CEFT_NEG_N3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190078	9241_CMV_AIM_A10	USA	2016/2018		genomic DNA	PBMC	9241_CMV_AIM_A10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190265	9241_CMV_AIM_A24	USA	2016/2018		genomic DNA	PBMC	9241_CMV_AIM_A24HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,10I,12Y,15L,23*,80*,83L,120H,133*,136I,137R,148I,184*,206R,225S
MT190319	9241_CMV_AIM_B9	USA	2016/2018		genomic DNA	PBMC	9241_CMV_AIM_B9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190080	9241_CMV_AIM_C20	USA	2016/2018		genomic DNA	PBMC	9241_CMV_AIM_C20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190082	9241_CMV_AIM_D13	USA	2016/2018		genomic DNA	PBMC	9241_CMV_AIM_D13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190084	9241_CMV_AIM_D15	USA	2016/2018		genomic DNA	PBMC	9241_CMV_AIM_D15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190086	9241_CMV_AIM_D3	USA	2016/2018		genomic DNA	PBMC	9241_CMV_AIM_D3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,91V,136M,148I,225S
MT190088	9241_CMV_AIM_G7	USA	2016/2018		genomic DNA	PBMC	9241_CMV_AIM_G7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190090	9241_CMV_AIM_I16	USA	2016/2018		genomic DNA	PBMC	9241_CMV_AIM_I16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,91V,136M,148I,225S
MT190092	9241_CMV_AIM_I4	USA	2016/2018		genomic DNA	PBMC	9241_CMV_AIM_I4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190094	9241_CMV_AIM_J12	USA	2016/2018		genomic DNA	PBMC	9241_CMV_AIM_J12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,120H,136M,148I,225S
MT190096	9241_CMV_AIM_L1	USA	2016/2018		genomic DNA	PBMC	9241_CMV_AIM_L1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190098	9241_CMV_AIMPl2_M16	USA	2016/2018		genomic DNA	PBMC	9241_CMV_AIMPl2_M16HIV-1 isolate from USAquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190323	9241_CMV_AIMPl2_M17	USA	2016/2018		genomic DNA	PBMC	9241_CMV_AIMPl2_M17HIV-1 isolate from USAquadruplex qPCR(Q4PCR) sequenced genome (weird)	1	231	6H,12Y,15L,83L,136M,148I,225S
MT190100	9241_CMV_AIMPl2_N13	USA	2016/2018		genomic DNA	PBMC	9241_CMV_AIMPl2_N13HIV-1 isolate from USAquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6H,12Y,15L,74K,83L,84Q,120H,136M,148I,225S
MT191084	9241_CMV_AIMPl2_O21	USA	2016/2018		genomic DNA	PBMC	9241_CMV_AIMPl2_O21HIV-1 isolate from USAquadruplex qPCR(Q4PCR) sequenced genome (intact)	1	231	6H,12Y,15L,83L,91V,136M,148I,225S
MT190102	9241_CMV_AIMPl3_C3	USA	2016/2018		genomic DNA	PBMC	9241_CMV_AIMPl3_C3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190104	9241_CMV_AIMPl3_G17	USA	2016/2018		genomic DNA	PBMC	9241_CMV_AIMPl3_G17HIV-1 isolate from USAquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6H,12Y,15L,83L,91V,136M,148I,225S
MT190106	9241_CMV_AIMPl3_H23	USA	2016/2018		genomic DNA	PBMC	9241_CMV_AIMPl3_H23HIV-1 isolate from USAquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6H,12Y,15L,83L,136M,148I,225S
MT190108	9241_CMV_AIMPl3_I18	USA	2016/2018		genomic DNA	PBMC	9241_CMV_AIMPl3_I18HIV-1 isolate from USAquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190325	9241_CMV_AIMPl3_J8	USA	2016/2018		genomic DNA	PBMC	9241_CMV_AIMPl3_J8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190110	9241_CMV_AIMPl3_K16	USA	2016/2018		genomic DNA	PBMC	9241_CMV_AIMPl3_K16HIV-1 isolate from USAquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190112	9241_CMV_AIMPl3_M19	USA	2016/2018		genomic DNA	PBMC	9241_CMV_AIMPl3_M19HIV-1 isolate from USAquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190044	9241_CMV_AIMPl3_M3	USA	2016/2018		genomic DNA	PBMC	9241_CMV_AIMPl3_M3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190045	9241_CMV_AIMPl3_P8	USA	2016/2018		genomic DNA	PBMC	9241_CMV_AIMPl3_P8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,91V,136M,148I,225S
MT191086	9241_CMV_CD69_A3	USA	2016/2018		genomic DNA	PBMC	9241_CMV_CD69_A3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190047	9241_CMV_CD69_B4	USA	2016/2018		genomic DNA	PBMC	9241_CMV_CD69_B4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT191087	9241_CMV_CD69_C9	USA	2016/2018		genomic DNA	PBMC	9241_CMV_CD69_C9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6H,12Y,15L,83L,120H,136M,148I,196S,225S
MT191088	9241_CMV_CD69_D15	USA	2016/2018		genomic DNA	PBMC	9241_CMV_CD69_D15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190051	9241_CMV_CD69_E10	USA	2016/2018		genomic DNA	PBMC	9241_CMV_CD69_E10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,10I,12Y,15L,83L,91V,136M,148I,225S
MT190055	9241_CMV_CD69_E19	USA	2016/2018		genomic DNA	PBMC	9241_CMV_CD69_E19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT191089	9241_CMV_CD69_E24	USA	2016/2018		genomic DNA	PBMC	9241_CMV_CD69_E24HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190053	9241_CMV_CD69_K15	USA	2016/2018		genomic DNA	PBMC	9241_CMV_CD69_K15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,91V,136M,148I,225S
MT190056	9241_CMV_CD69_K5	USA	2016/2018		genomic DNA	PBMC	9241_CMV_CD69_K5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190060	9241_CMV_CD69_K6	USA	2016/2018		genomic DNA	PBMC	9241_CMV_CD69_K6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,91V,136M,148I,225S
MT190061	9241_CMV_CD69_L3	USA	2016/2018		genomic DNA	PBMC	9241_CMV_CD69_L3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,40V,83L,120H,136M,148I,225S
MT190063	9241_CMV_CD69_M8	USA	2016/2018		genomic DNA	PBMC	9241_CMV_CD69_M8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190065	9241_CMV_CD69_O14	USA	2016/2018		genomic DNA	PBMC	9241_CMV_CD69_O14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190327	9241_CMV_CD69_O7	USA	2016/2018		genomic DNA	PBMC	9241_CMV_CD69_O7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT191090	9241_CMV_NEG_B20	USA	2016/2018		genomic DNA	PBMC	9241_CMV_NEG_B20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190113	9241_CMV_NEG_C14	USA	2016/2018		genomic DNA	PBMC	9241_CMV_NEG_C14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190115	9241_CMV_NEG_F8	USA	2016/2018		genomic DNA	PBMC	9241_CMV_NEG_F8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT191091	9241_CMV_NEG_H2	USA	2016/2018		genomic DNA	PBMC	9241_CMV_NEG_H2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190117	9241_CMV_NEG_H24	USA	2016/2018		genomic DNA	PBMC	9241_CMV_NEG_H24HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190118	9241_CMV_NEG_J8	USA	2016/2018		genomic DNA	PBMC	9241_CMV_NEG_J8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,136M,148I,225S
MT190069	9241_CMV_NEG_K10	USA	2016/2018		genomic DNA	PBMC	9241_CMV_NEG_K10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	230	6H,12Y,15L,83L,91V,136M,148I,225S,230A
MT190067	9241_CMV_NEG_O20	USA	2016/2018		genomic DNA	PBMC	9241_CMV_NEG_O20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,91V,136M,148I,225S
MT190329	9241_GAG_AIM_J12	USA	2016/2018		genomic DNA	PBMC	9241_GAG_AIM_J12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190269	9241_GAG_CD69_C1	USA	2016/2018		genomic DNA	PBMC	9241_GAG_CD69_C1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190268	9241_GAG_CD69_D9	USA	2016/2018		genomic DNA	PBMC	9241_GAG_CD69_D9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,10I,12Y,15L,23*,80*,83L,100K,106R,116R,117*,120H,133*,136M,137K,148I,184*,206R,220R,222R,223R,225S
MT190331	9241_GAG_CD69_E24	USA	2016/2018		genomic DNA	PBMC	9241_GAG_CD69_E24HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190071	9241_GAG_CD69_F19	USA	2016/2018		genomic DNA	PBMC	9241_GAG_CD69_F19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,23*,83L,106R,120H,136M,148I,225S
MT190073	9241_GAG_CD69_F3	USA	2016/2018		genomic DNA	PBMC	9241_GAG_CD69_F3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,136M,148I,225S
MT190333	9241_GAG_CD69_F4	USA	2016/2018		genomic DNA	PBMC	9241_GAG_CD69_F4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190075	9241_GAG_CD69_G16	USA	2016/2018		genomic DNA	PBMC	9241_GAG_CD69_G16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190077	9241_GAG_CD69_G2	USA	2016/2018		genomic DNA	PBMC	9241_GAG_CD69_G2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT191092	9241_GAG_CD69_G3	USA	2016/2018		genomic DNA	PBMC	9241_GAG_CD69_G3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6H,12Y,15L,83L,136M,148I,225S
MT190079	9241_GAG_CD69_G4	USA	2016/2018		genomic DNA	PBMC	9241_GAG_CD69_G4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190337	9241_GAG_CD69_K21	USA	2016/2018		genomic DNA	PBMC	9241_GAG_CD69_K21HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190081	9241_GAG_CD69_L14	USA	2016/2018		genomic DNA	PBMC	9241_GAG_CD69_L14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190083	9241_GAG_CD69_O17	USA	2016/2018		genomic DNA	PBMC	9241_GAG_CD69_O17HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,23*,83L,106R,120H,136M,148I,225S
MT190085	9241_GAG_NEG_D21	USA	2016/2018		genomic DNA	PBMC	9241_GAG_NEG_D21HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,91V,136M,148I,225S
MT190087	9241_GAG_NEG_E20	USA	2016/2018		genomic DNA	PBMC	9241_GAG_NEG_E20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT191093	9241_GAG_NEG_F10	USA	2016/2018		genomic DNA	PBMC	9241_GAG_NEG_F10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190089	9241_GAG_NEG_F20	USA	2016/2018		genomic DNA	PBMC	9241_GAG_NEG_F20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190093	9241_GAG_NEG_J2	USA	2016/2018		genomic DNA	PBMC	9241_GAG_NEG_J2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190095	9241_GAG_NEG_N10	USA	2016/2018		genomic DNA	PBMC	9241_GAG_NEG_N10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190097	9241_GAG_NEG_N15	USA	2016/2018		genomic DNA	PBMC	9241_GAG_NEG_N15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT191094	9241_GAG_NEG_P7	USA	2016/2018		genomic DNA	PBMC	9241_GAG_NEG_P7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT191096	9241_MOGPl1_D11	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl1_D11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6H,12Y,15L,83L,91V,136M,148I,225S
MT190099	9241_MOGPl1_E12	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl1_E12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,91V,120H,136M,148I,225S
MT190271	9241_MOGPl1_G17	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl1_G17HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,12Y,15L,46R,80*,83L,101R,106R,116R,120H,133*,136M,137R,148I,156R,225S
MT190339	9241_MOGPl1_H5	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl1_H5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190249	9241_MOGPl1_J2	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl1_J2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (msd_mutation)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190101	9241_MOGPl1_L16	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl1_L16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190103	9241_MOGPl1_L5	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl1_L5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190105	9241_MOGPl1_M14	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl1_M14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,120H,136M,148I,225S
MT190107	9241_MOGPl10_C23	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl10_C23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,136M,148I,225S
MT190109	9241_MOGPl10_D7	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl10_D7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190111	9241_MOGPl10_I12	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl10_I12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190114	9241_MOGPl10_J22	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl10_J22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,91V,136M,148I,225S
MT190340	9241_MOGPl10_K23	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl10_K23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6L,10L,15L,83L,120H,136M,148I,225S
MT190116	9241_MOGPl10_L6	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl10_L6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,136M,148I,225S
MT191095	9241_MOGPl10_M23	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl10_M23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190342	9241_MOGPl10_N11	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl10_N11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190344	9241_MOGPl10_N19	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl10_N19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190273	9241_MOGPl10_N9	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl10_N9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,12Y,15L,46R,80*,83L,101R,106R,116R,120H,133*,136M,137R,148I,156R,225S
MT190275	9241_MOGPl10_O5	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl10_O5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190277	9241_MOGPl10_O6	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl10_O6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,8R,10I,12Y,15L,23*,71K,76K,80*,83L,97K,100K,101R,106R,116R,117*,120H,133*,136M,137K,148I,156R,162K,167Q,184*,206R,220K,222R,223R,225S,229K
MT190251	9241_MOGPl10_O7	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl10_O7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (msd_mutation)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190279	9241_MOGPl10_P5	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl10_P5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,12Y,15L,83L,120H,136M,148I,184*,225S
MT191097	9241_MOGPl10_P7	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl10_P7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6H,12Y,15L,83L,136M,148I,225S
MT191098	9241_MOGPl11p_A6	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl11p_A6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190281	9241_MOGPl11p_B7	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl11p_B7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,12Y,15L,83L,91V,136M,148I,225S
MT190119	9241_MOGPl11p_C10	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl11p_C10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190343	9241_MOGPl11p_F14	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl11p_F14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190120	9241_MOGPl11p_I12	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl11p_I12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,78V,83L,120H,136M,148I,225S
MT190121	9241_MOGPl11p_L18	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl11p_L18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190123	9241_MOGPl11p_N13	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl11p_N13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,28K,83L,96I,120H,136M,143K,148I,166N,187K,213K,225S
MT190124	9241_MOGPl12_G13	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl12_G13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,20V,83L,120H,136M,148I,225S
MT190345	9241_MOGPl12_G6	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl12_G6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190125	9241_MOGPl12_J11	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl12_J11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,116R,120H,136I,148I,184*,225S
MT191099	9241_MOGPl12_L4	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl12_L4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6H,12Y,15L,83L,136M,148I,225S
MT190126	9241_MOGPl12_M14	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl12_M14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,136M,148I,225S
MT190283	9241_MOGPl12_O22	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl12_O22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT191101	9241_MOGPl13_B4	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl13_B4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190286	9241_MOGPl13_D18	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl13_D18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,10I,12Y,15L,23*,60R,80*,83L,106R,117*,120H,133*,136I,137R,148I,167Q,184*,222R,223R,225S
MT190128	9241_MOGPl13_D22	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl13_D22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,91V,136M,148I,225S
MT191100	9241_MOGPl13_G23	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl13_G23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT191102	9241_MOGPl13_I14	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl13_I14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6H,12Y,15L,83L,91V,136M,148I,225S
MT190129	9241_MOGPl13_N19	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl13_N19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190130	9241_MOGPl13_O10	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl13_O10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,120H,136M,148I,225S
MT190131	9241_MOGPl13_P10	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl13_P10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT191103	9241_MOGPl13_P23	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl13_P23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190347	9241_MOGPl2_A14	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl2_A14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190349	9241_MOGPl2_C9	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl2_C9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190132	9241_MOGPl2_E16	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl2_E16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,136M,148I,225S
MT190287	9241_MOGPl2_F8	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl2_F8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,12Y,15L,46R,80*,83L,101R,106R,116R,120H,133*,136M,137R,148I,156R,225S
MT190348	9241_MOGPl2_G20	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl2_G20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190133	9241_MOGPl2_G6	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl2_G6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT191104	9241_MOGPl2_G8	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl2_G8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190134	9241_MOGPl2_I15	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl2_I15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,136M,148I,225S
MT190135	9241_MOGPl2_K22	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl2_K22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190136	9241_MOGPl2_M11	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl2_M11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,23*,80*,83L,120H,133*,136M,148I,184*,207S,225S
MT190137	9241_MOGPl2_M17	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl2_M17HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT191105	9241_MOGPl2_N2	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl2_N2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6H,12Y,15L,83L,91V,136M,148I,225S
MT190138	9241_MOGPl2_O17	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl2_O17HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190289	9241_MOGPl2_P18	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl2_P18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,12Y,15L,80*,83L,120H,136M,148I,173K,184*,225S
MT190139	9241_MOGPl2_P19	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl2_P19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,136M,148I,225S
MT190140	9241_MOGPl2_P8	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl2_P8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190292	9241_MOGPl3_A22	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl3_A22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190141	9241_MOGPl3_B21	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl3_B21HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190293	9241_MOGPl3_F6	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl3_F6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,12Y,15L,23*,60R,80*,83L,106R,117*,120H,136M,137R,148I,156R,184*,222E,225S,229K
MT190142	9241_MOGPl3_I10	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl3_I10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190353	9241_MOGPl3_J19	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl3_J19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190143	9241_MOGPl3_J4	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl3_J4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,91V,136M,148I,225S
MT190145	9241_MOGPl3_K20	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl3_K20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,136M,148I,225S
MT190146	9241_MOGPl3_M15	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl3_M15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190350	9241_MOGPl4_B7	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl4_B7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190147	9241_MOGPl4_F20	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl4_F20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190148	9241_MOGPl4_K11	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl4_K11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190295	9241_MOGPl4_L13	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl4_L13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,10I,12Y,15L,18K,22T,23*,28K,51N,60K,76K,80*,81N,83L,96I,97K,100K,101E,106K,116E,117*,120H,127K,128K,132K,133*,136I,137K,143K,148I,156R,159K,167Q,175K,184*,220E,222E,223R,225S
MT190351	9241_MOGPl4_M17	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl4_M17HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT191106	9241_MOGPl4_N12	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl4_N12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6H,12Y,15L,83L,136M,148I,225S
MT191111	9241_MOGPl4_O8	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl4_O8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6H,12Y,15L,83L,91V,136M,148I,225S
MT190149	9241_MOGPl4_O9	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl4_O9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,136M,148I,225S
MT191108	9241_MOGPl4_P12	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl4_P12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6H,12Y,15L,83L,136M,148I,225S
MT191107	9241_MOGPl4_P13	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl4_P13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6H,12Y,15L,83L,136M,148I,225S
MT190352	9241_MOGPl5_B1	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl5_B1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6H,12Y,15L,83L,136M,148I,225S
MT190151	9241_MOGPl5_D19	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl5_D19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190150	9241_MOGPl5_D8	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl5_D8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190297	9241_MOGPl5_E8	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl5_E8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190298	9241_MOGPl5_F18	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl5_F18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT191109	9241_MOGPl5_F7	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl5_F7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190152	9241_MOGPl5_I12	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl5_I12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,136M,148I,225S
MT190301	9241_MOGPl5_N20	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl5_N20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,12Y,15L,46R,80*,83L,101R,106R,116R,120H,133*,136M,137R,148I,156R,225S
MT190153	9241_MOGPl5_N5	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl5_N5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190302	9241_MOGPl5_P8	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl5_P8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,8R,12Y,15L,23*,80*,83L,102N,106K,120H,136M,137R,148I,156R,167Q,184*,206R,225S
MT190155	9241_MOGPl6_B13	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl6_B13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,91V,136M,148I,225S,229G
MT190154	9241_MOGPl6_B14	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl6_B14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190303	9241_MOGPl6_B8	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl6_B8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190156	9241_MOGPl6_C1	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl6_C1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190157	9241_MOGPl6_D7	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl6_D7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT191110	9241_MOGPl6_N4	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl6_N4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190304	9241_MOGPl6_O20	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl6_O20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,8R,10I,12Y,15L,23*,29K,71K,80*,83L,89R,91V,96I,100K,101R,106E,116R,117*,127R,133*,136I,137K,148I,156R,159K,162K,167Q,175K,184*,215I,222R,223R,225S,229K
MT190158	9241_MOGPl6_P2	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl6_P2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,91V,136M,148I,225S
MT190305	9241_MOGPl7_A1	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl7_A1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190159	9241_MOGPl7_A19	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl7_A19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190354	9241_MOGPl7_C20	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl7_C20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190160	9241_MOGPl7_D20	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl7_D20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,136M,148I,225S
MT190161	9241_MOGPl7_E19	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl7_E19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,136M,148I,225S
MT190162	9241_MOGPl7_F7	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl7_F7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190306	9241_MOGPl7_I14	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl7_I14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,10I,12Y,15L,23*,80*,83L,91V,97K,100K,106R,117*,133*,136I,137R,148I,156R,162K,184*,206R,218Y,223E,225S
MT190250	9241_MOGPl7_I3	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl7_I3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (msd_mutation)	1	231	6H,12Y,15L,83L,91V,136M,148I,167Q,225S
MT190307	9241_MOGPl7_L19	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl7_L19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,10I,12Y,15L,23*,80*,83L,89R,101R,106K,120H,133*,136M,137R,148I,156R,184*,225S
MT190163	9241_MOGPl7_M17	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl7_M17HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,23*,76K,83L,120H,136I,148I,156R,184S,225S
MT190164	9241_MOGPl7_O1	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl7_O1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,136M,148I,225S
MT190165	9241_MOGPl7_P12	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl7_P12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190308	9241_MOGPl7_P18	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl7_P18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,12Y,15L,46R,80*,83L,101R,106R,116R,120H,133*,136M,137R,148I,156R,225S
MT190166	9241_MOGPl8p_A13	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl8p_A13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,91V,120H,136M,148I,225S
MT190167	9241_MOGPl8p_B19	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl8p_B19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190168	9241_MOGPl8p_B5	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl8p_B5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190309	9241_MOGPl8p_C15	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl8p_C15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190310	9241_MOGPl8p_E23	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl8p_E23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,10I,12Y,15L,23*,51N,80*,83L,101R,106E,117*,120H,127E,133*,136M,137R,148I,156R,162K,167Q,184*,214I,220R,222R,225S,229K
MT190355	9241_MOGPl8p_E5	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl8p_E5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6H,12Y,15L,83L,136M,148I,225S
MT190170	9241_MOGPl8p_I14	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl8p_I14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190171	9241_MOGPl8p_M11	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl8p_M11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,35K,79K,83L,120H,136M,148I,225S
MT190172	9241_MOGPl8p_P9	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl8p_P9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190173	9241_MOGPl9_A6	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl9_A6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,91V,136M,148I,225S
MT190175	9241_MOGPl9_B1	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl9_B1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,91V,136M,148I,225S
MT190174	9241_MOGPl9_B11	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl9_B11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,116R,120H,136I,148I,184*,225S
MT190176	9241_MOGPl9_C2	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl9_C2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190177	9241_MOGPl9_E13	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl9_E13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT191112	9241_MOGPl9_F21	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl9_F21HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190356	9241_MOGPl9_G19	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl9_G19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6H,12Y,15L,83L,136M,148I,225S
MT190178	9241_MOGPl9_H9	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl9_H9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190357	9241_MOGPl9_L19	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl9_L19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190358	9241_MOGPl9_P3	USA	2016/2018		genomic DNA	PBMC	9241_MOGPl9_P3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190179	9241_SEB_AIM_A8	USA	2016/2018		genomic DNA	PBMC	9241_SEB_AIM_A8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,91V,136M,148I,225S
MT190311	9241_SEB_AIM_B7	USA	2016/2018		genomic DNA	PBMC	9241_SEB_AIM_B7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,12Y,15L,46R,80*,83L,101R,106R,116R,120H,133*,136M,137R,148I,156R,225S
MT190180	9241_SEB_AIM_C13	USA	2016/2018		genomic DNA	PBMC	9241_SEB_AIM_C13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190181	9241_SEB_AIM_E20	USA	2016/2018		genomic DNA	PBMC	9241_SEB_AIM_E20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT191113	9241_SEB_AIM_I1	USA	2016/2018		genomic DNA	PBMC	9241_SEB_AIM_I1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190182	9241_SEB_AIM_I12	USA	2016/2018		genomic DNA	PBMC	9241_SEB_AIM_I12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190183	9241_SEB_AIM_I3	USA	2016/2018		genomic DNA	PBMC	9241_SEB_AIM_I3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190359	9241_SEB_AIM_M13	USA	2016/2018		genomic DNA	PBMC	9241_SEB_AIM_M13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	3	231	6H,12Y,15L,83L,136M,148I,225S
MT190360	9241_SEB_AIMPl2_A15	USA	2016/2018		genomic DNA	PBMC	9241_SEB_AIMPl2_A15HIV-1 isolate from USAquadruplex qPCR(Q4PCR) sequenced genome (weird)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190184	9241_SEB_AIMPl2_B18	USA	2016/2018		genomic DNA	PBMC	9241_SEB_AIMPl2_B18HIV-1 isolate from USAquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190185	9241_SEB_AIMPl2_G3	USA	2016/2018		genomic DNA	PBMC	9241_SEB_AIMPl2_G3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190253	9241_SEB_AIMPl2_I3	USA	2016/2018		genomic DNA	PBMC	9241_SEB_AIMPl2_I3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,12Y,15L,46R,80*,83L,101R,106R,116R,120H,133*,136M,137R,148I,156R,225S
MT190186	9241_SEB_AIMPl2_K14	USA	2016/2018		genomic DNA	PBMC	9241_SEB_AIMPl2_K14HIV-1 isolate from USAquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190361	9241_SEB_AIMPl2_M2	USA	2016/2018		genomic DNA	PBMC	9241_SEB_AIMPl2_M2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6H,12Y,15L,83L,136M,148I,225S
MT190362	9241_SEB_AIMPl2_M6	USA	2016/2018		genomic DNA	PBMC	9241_SEB_AIMPl2_M6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6H,12Y,15L,83L,91V,117*,132S,136M,148I,166N,225S
MT190187	9241_SEB_AIMPl3_B2	USA	2016/2018		genomic DNA	PBMC	9241_SEB_AIMPl3_B2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT191114	9241_SEB_AIMPl3_C15	USA	2016/2018		genomic DNA	PBMC	9241_SEB_AIMPl3_C15HIV-1 isolate from USAquadruplex qPCR(Q4PCR) sequenced genome (intact)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190188	9241_SEB_AIMPl3_C20	USA	2016/2018		genomic DNA	PBMC	9241_SEB_AIMPl3_C20HIV-1 isolate from USAquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT191073	9241_SEB_AIMPl3_L11	USA	2016/2018		genomic DNA	PBMC	9241_SEB_AIMPl3_L11HIV-1 isolate from USAquadruplex qPCR(Q4PCR) sequenced genome (intact)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190190	9241_SEB_AIMPl3_N3	USA	2016/2018		genomic DNA	PBMC	9241_SEB_AIMPl3_N3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190191	9241_SEB_AIMPl3_O17	USA	2016/2018		genomic DNA	PBMC	9241_SEB_AIMPl3_O17HIV-1 isolate from USAquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190192	9241_SEB_AIMPl3_O2	USA	2016/2018		genomic DNA	PBMC	9241_SEB_AIMPl3_O2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190363	9241_SEB_AIMPl3_P9	USA	2016/2018		genomic DNA	PBMC	9241_SEB_AIMPl3_P9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190316	9241_SEB_CD69_A5	USA	2016/2018		genomic DNA	PBMC	9241_SEB_CD69_A5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	11	231	12Y,15L,23*,46E,60E,80*,83L,100K,101R,106R,116R,120H,127R,133*,136M,137R,148I,156R,184*,220R,222K,225S,230A
MT190194	9241_SEB_CD69_G20	USA	2016/2018		genomic DNA	PBMC	9241_SEB_CD69_G20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,91V,136M,148I,225S
MT190195	9241_SEB_CD69_L14	USA	2016/2018		genomic DNA	PBMC	9241_SEB_CD69_L14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,91V,136M,148I,225S
MT190254	9241_SEB_CD69_O1	USA	2016/2018		genomic DNA	PBMC	9241_SEB_CD69_O1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,12Y,15L,60E,80*,83L,116R,120H,136M,148I,184*,225S
MT190318	9241_SEB_CD69_O9	USA	2016/2018		genomic DNA	PBMC	9241_SEB_CD69_O9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6H,12Y,15L,83L,91V,136M,148I,225S
MT191075	9241_SEB_NEG_E12	USA	2016/2018		genomic DNA	PBMC	9241_SEB_NEG_E12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6H,12Y,15L,83L,136M,148I,225S
MT190257	9241_SEB_NEG_G14	USA	2016/2018		genomic DNA	PBMC	9241_SEB_NEG_G14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,12Y,15L,23*,80*,83L,116R,117*,127R,136I,137R,148I,156R,184*,225S
MT190258	9241_SEB_NEG_G15	USA	2016/2018		genomic DNA	PBMC	9241_SEB_NEG_G15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,12Y,15L,23*,80*,83L,116R,117*,120H,127E,128K,133*,136I,137R,148I,184*,206R,222R,225S
MT190259	9241_SEB_NEG_J22	USA	2016/2018		genomic DNA	PBMC	9241_SEB_NEG_J22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,12Y,15L,83L,136M,148I,225S
MT190264	9241_SEB_NEG_P10	USA	2016/2018		genomic DNA	PBMC	9241_SEB_NEG_P10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190261	9241_SEB_NEG_P16	USA	2016/2018		genomic DNA	PBMC	9241_SEB_NEG_P16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,12Y,15L,80*,83L,120H,136M,148I,225S
MT190196	9241_wk-2_pl1_A11	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl1_A11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190197	9241_wk-2_pl1_A18	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl1_A18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,136M,148I,225S
MT190198	9241_wk-2_pl1_A20	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl1_A20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,136M,148I,225S
MT190320	9241_wk-2_pl1_B10	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl1_B10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190199	9241_wk-2_pl1_B11	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl1_B11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190266	9241_wk-2_pl1_B3	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl1_B3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,12Y,15L,23*,80*,83L,106R,120H,133*,136I,137R,148I,156R,222E,225S
MT190200	9241_wk-2_pl1_E18	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl1_E18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190201	9241_wk-2_pl1_G5	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl1_G5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,91V,136M,148I,225S
MT190267	9241_wk-2_pl1_H7	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl1_H7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,10I,12Y,15L,23*,80*,83L,89R,101R,106R,116R,117*,133*,136I,137R,148I,156R,167Q,184*,185I,206R,222E,225S
MT190202	9241_wk-2_pl1_H8	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl1_H8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190203	9241_wk-2_pl1_M22	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl1_M22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190270	9241_wk-2_pl1_N10	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl1_N10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,12Y,15L,24I,79K,80*,83L,89R,101R,120H,133*,136M,137K,148I,167Q,225S
MT190272	9241_wk-2_pl1_O21	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl1_O21HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190204	9241_wk-2_pl2_B11	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl2_B11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,83L,120H,136M,148I,225S
MT190205	9241_wk-2_pl2_B17	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl2_B17HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190274	9241_wk-2_pl2_D21	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl2_D21HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,12Y,15L,46R,80*,83L,101R,106R,116R,120H,133*,136M,137R,148I,156R,225S
MT190312	9241_wk-2_pl2_D4	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl2_D4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,12Y,15L,23*,80*,83L,120H,136I,148I,156R,184*,225S
MT190206	9241_wk-2_pl2_D5	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl2_D5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190207	9241_wk-2_pl2_E14	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl2_E14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190208	9241_wk-2_pl2_E3	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl2_E3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190209	9241_wk-2_pl2_E8	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl2_E8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,191I,225S
MT190313	9241_wk-2_pl2_F17	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl2_F17HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,12Y,15L,23*,60R,80*,83L,101R,106R,116R,117*,120H,133*,136I,137R,148I,156R,167Q,184*,206R,214I,225S
MT190314	9241_wk-2_pl2_F19	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl2_F19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,12Y,15L,83L,103N,120H,136M,148I,225S
MT190210	9241_wk-2_pl2_G10	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl2_G10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190322	9241_wk-2_pl2_G18	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl2_G18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6H,12Y,15L,83L,120H,136M,143~,144~,145~,146~,147~,148~,225S
MT190315	9241_wk-2_pl2_J20	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl2_J20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,12Y,15L,23*,60R,80*,83L,116R,120H,136M,148I,184*,225S
MT190278	9241_wk-2_pl2_J5	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl2_J5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,10I,12Y,15L,23*,80*,83L,106R,117*,120H,133*,136I,148I,184*,206R,220R,222E,225S
MT190276	9241_wk-2_pl2_K14	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl2_K14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,8R,10I,12Y,15L,23*,80*,83L,106R,116R,117*,133*,136M,137R,148I,156R,173K,180K,184*,225S
MT190324	9241_wk-2_pl2_L2	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl2_L2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190280	9241_wk-2_pl2_M7	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl2_M7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,12Y,15L,23*,28K,80*,83L,89R,100K,106R,116R,117*,136M,137R,148I,156R,184*,225S
MT190328	9241_wk-2_pl2_N24	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl2_N24HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190326	9241_wk-2_pl2_O21	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl2_O21HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190330	9241_wk-2_pl2_O22	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl2_O22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	218	6H,12Y,15L,83L,120H,136M,148I,218Y
MT190332	9241_wk-2_pl3_A5	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl3_A5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6H,12Y,15L,83L,91V,136M,148I,225S
MT190282	9241_wk-2_pl3_A7	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl3_A7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,10I,12Y,15L,23*,29K,80*,83L,117*,120H,128K,133*,136I,137R,148I,156R,184*,206R,220R,222E,223R,225S
MT190211	9241_wk-2_pl3_C24	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl3_C24HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190213	9241_wk-2_pl3_D12	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl3_D12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190284	9241_wk-2_pl3_D15	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl3_D15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,10I,12Y,15L,23*,80*,83L,106R,117*,120H,133*,136M,137R,148I,167Q,184*,225S
MT190214	9241_wk-2_pl3_D21	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl3_D21HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190285	9241_wk-2_pl3_F15	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl3_F15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,10I,12Y,15L,23*,60R,80*,83L,100K,106R,116R,117*,120H,133*,136M,137K,148I,156R,167Q,173K,184*,206R,220R,225S
MT190215	9241_wk-2_pl3_G4	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl3_G4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,136M,148I,225S
MT190216	9241_wk-2_pl3_H8	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl3_H8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,91V,136M,148I,225S
MT190217	9241_wk-2_pl3_I3	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl3_I3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,136M,148I,225S
MT190288	9241_wk-2_pl3_K13	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl3_K13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,8R,12Y,15L,23*,80*,83L,106R,120H,127R,133*,136M,137R,148I,156R,184*,222E,225S
MT190290	9241_wk-2_pl3_L14	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl3_L14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,8R,12Y,15L,23*,66I,68I,80*,83L,97K,106K,117*,120H,133*,136M,137K,148I,156R,167Q,173K,184*,206K,212K,214I,220R,222R,223R,225S
MT190334	9241_wk-2_pl3_L15	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl3_L15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190336	9241_wk-2_pl3_L17	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl3_L17HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190291	9241_wk-2_pl3_M13	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl3_M13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,8R,12Y,15L,23*,80*,83L,106E,117*,120H,136I,137E,148I,184*,222E,225S
MT190218	9241_wk-2_pl3_N12	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl3_N12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190338	9241_wk-2_pl3_N2	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl3_N2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT191077	9241_wk-2_pl3_N6	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl3_N6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190219	9241_wk-2_pl3_N7	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl3_N7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,91V,136M,148I,225S
MT190220	9241_wk-2_pl3_O2	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl3_O2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,91V,136M,148I,183I,225S
MT190364	9241_wk-2_pl3_O24	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl3_O24HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190221	9241_wk-2_pl3_O6	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl3_O6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190222	9241_wk-2_pl3_P14	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl3_P14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190223	9241_wk-2_pl4_D1	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl4_D1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190365	9241_wk-2_pl4_D23	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl4_D23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6H,12Y,15L,83L,136M,148I,225S
MT191079	9241_wk-2_pl4_F11	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl4_F11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6H,12Y,15L,83L,136M,148I,225S
MT190224	9241_wk-2_pl4_F22	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl4_F22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190225	9241_wk-2_pl4_F4	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl4_F4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,136M,148I,225S
MT190226	9241_wk-2_pl4_H23	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl4_H23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT191081	9241_wk-2_pl4_H24	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl4_H24HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190227	9241_wk-2_pl4_I5	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl4_I5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190294	9241_wk-2_pl4_J3	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl4_J3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,8R,12Y,15L,23*,80*,83L,91V,97K,127R,133*,136I,137K,148I,156R,184*,222E,223R,225S,229K
MT190228	9241_wk-2_pl4_L13	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl4_L13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,91V,136M,148I,225S
MT190229	9241_wk-2_pl5_B5	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl5_B5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,153L,225S
MT190230	9241_wk-2_pl5_C19	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl5_C19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190231	9241_wk-2_pl5_E22	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl5_E22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190232	9241_wk-2_pl5_E7	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl5_E7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190233	9241_wk-2_pl5_F16	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl5_F16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,136M,148I,225S
MT190234	9241_wk-2_pl5_F4	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl5_F4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,23*,80*,83L,117*,120H,136M,148I,184*,225S
MT190235	9241_wk-2_pl5_G21	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl5_G21HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190296	9241_wk-2_pl5_G9	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl5_G9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,10I,12Y,15L,23*,29K,80*,83L,117*,120H,128K,133*,136I,137R,148I,156R,184*,206R,220R,222E,223R,225S
MT190236	9241_wk-2_pl5_H14	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl5_H14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190237	9241_wk-2_pl5_H16	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl5_H16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,91V,136M,148I,225S
MT190367	9241_wk-2_pl5_J22	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl5_J22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190238	9241_wk-2_pl5_J5	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl5_J5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190239	9241_wk-2_pl5_K18	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl5_K18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190240	9241_wk-2_pl5_K7	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl5_K7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,136M,148I,225S
MT190241	9241_wk-2_pl5_L13	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl5_L13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190242	9241_wk-2_pl5_M10	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl5_M10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190243	9241_wk-2_pl5_M12	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl5_M12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,91V,136M,148I,225S
MT190244	9241_wk-2_pl5_M23	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl5_M23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190245	9241_wk-2_pl5_N13	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl5_N13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,191I,225S
MT190247	9241_wk-2_pl5_N23	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl5_N23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190246	9241_wk-2_pl5_O19	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl5_O19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT191085	9241_wk-2_pl5_O2	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl5_O2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6H,12Y,15L,83L,120H,136M,148I,196S,225S
MT190299	9241_wk-2_pl5_O22	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl5_O22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6H,12Y,15L,23*,46R,76K,80*,83L,106R,120H,127R,133*,136I,137R,148I,167Q,184*,206R,209T,222R,223R,225S
MT190248	9241_wk-2_pl5_O23	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl5_O23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6H,12Y,15L,83L,117*,120H,136M,148I,225S
MT191083	9241_wk-2_pl5_O6	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl5_O6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT190300	9241_wk-2_pl5_P13	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl5_P13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6L,15L,23*,76K,80*,83L,100K,120H,136M,148I,156R,184*,225S
MT190341	9241_wk-2_pl5_P22	USA	2016/2018		genomic DNA	PBMC	9241_wk-2_pl5_P22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6H,12Y,15L,83L,120H,136M,148I,225S
MT191029	9247_CEFT_CD69_E18	USA	2016/2018		genomic DNA	PBMC	9247_CEFT_CD69_E18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,14P,15L,83L,116A,154K,170R,194S
MT190028	9247_CEFT_CD69_K11	USA	2016/2018		genomic DNA	PBMC	9247_CEFT_CD69_K11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6L,14P,15L,23*,80*,83L,100K,116A,154K,170R,184*,194S
MT190008	9247_CEFT_CD69_L18	USA	2016/2018		genomic DNA	PBMC	9247_CEFT_CD69_L18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (msd_mutation)	1	231	6L,14P,15L,83L,116A,154K,170R,194S
MT190029	9247_CEFT_CD69_N6	USA	2016/2018		genomic DNA	PBMC	9247_CEFT_CD69_N6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6L,10I,14P,15L,23*,60E,80*,83L,116A,117*,118T,127R,133*,137R,143K,154K,156R,167Q,170R,184*,194S
MT191031	9247_CEFT_CD69_O11	USA	2016/2018		genomic DNA	PBMC	9247_CEFT_CD69_O11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,14P,15L,83L,116A,118T,154K,170R,194S
MT190010	9247_CEFT_CD69_P1	USA	2016/2018		genomic DNA	PBMC	9247_CEFT_CD69_P1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (msd_mutation)	1	231	6L,14P,15L,83L,116A,154K,170R,194S
MT190030	9247_CEFT_CD69_P22	USA	2016/2018		genomic DNA	PBMC	9247_CEFT_CD69_P22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6L,10I,14P,15L,23*,80*,83L,89E,96I,101R,116A,117*,154K,170R,184*,194S,206R
MT189991	9247_CEFT_NEG_A13	USA	2016/2018		genomic DNA	PBMC	9247_CEFT_NEG_A13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,14P,15L,83L,116A,154K,170R,194S
MT189992	9247_CEFT_NEG_M3	USA	2016/2018		genomic DNA	PBMC	9247_CEFT_NEG_M3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,14P,15L,83L,116A,118T,154K,170R,194S
MT191033	9247_CEFT_NEG_N11	USA	2016/2018		genomic DNA	PBMC	9247_CEFT_NEG_N11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,14P,15L,83L,116A,154K,170R,194S
MT191035	9247_CEFT_NEG_N5	USA	2016/2018		genomic DNA	PBMC	9247_CEFT_NEG_N5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,14P,15L,83L,116A,118T,154K,170R,194S
MT190009	9247_CMV_CD69_E1	USA	2016/2018		genomic DNA	PBMC	9247_CMV_CD69_E1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (msd_mutation)	1	231	6L,14P,15L,83L,116A,154K,170R,194S
MT191036	9247_CMV_CD69_O5	USA	2016/2018		genomic DNA	PBMC	9247_CMV_CD69_O5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,14P,15L,83L,116A,154K,170R,194S
MT189994	9247_CMV_NEG_I6	USA	2016/2018		genomic DNA	PBMC	9247_CMV_NEG_I6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,14P,15L,23*,60E,80*,83L,106E,116A,117*,118T,154K,156R,170R,184*,194S
MT191039	9247_GAG_AIM_A1	USA	2016/2018		genomic DNA	PBMC	9247_GAG_AIM_A1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,14P,15L,83L,116A,154K,170R,194S
MT189995	9247_GAG_AIM_C8	USA	2016/2018		genomic DNA	PBMC	9247_GAG_AIM_C8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,14P,15L,83L,116A,154K,170R,194S
MT190011	9247_GAG_AIM_E14	USA	2016/2018		genomic DNA	PBMC	9247_GAG_AIM_E14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (msd_mutation)	1	231	6L,14P,15L,83L,116A,154K,170R,194S
MT189996	9247_GAG_AIM_E5	USA	2016/2018		genomic DNA	PBMC	9247_GAG_AIM_E5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,14P,15L,83L,116A,154K,170R,194S
MT191041	9247_GAG_AIM_F10	USA	2016/2018		genomic DNA	PBMC	9247_GAG_AIM_F10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,14P,15L,83L,116A,154K,170R,194S
MT191043	9247_GAG_AIM_F20	USA	2016/2018		genomic DNA	PBMC	9247_GAG_AIM_F20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,14P,15L,83L,116A,154K,170R,194S
MT191045	9247_GAG_AIM_F22	USA	2016/2018		genomic DNA	PBMC	9247_GAG_AIM_F22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,14P,15L,83L,116A,154K,170R,194S
MT189997	9247_GAG_AIM_F7	USA	2016/2018		genomic DNA	PBMC	9247_GAG_AIM_F7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,10I,14P,15L,23*,80*,83L,116A,118T,133*,137R,143K,152N,154K,156R,162K,167Q,170R,184*,194S
MT191046	9247_GAG_AIM_G1	USA	2016/2018		genomic DNA	PBMC	9247_GAG_AIM_G1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,14P,15L,83L,116A,154K,170R,194S
MT190012	9247_GAG_AIM_G10	USA	2016/2018		genomic DNA	PBMC	9247_GAG_AIM_G10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (msd_mutation)	1	231	6L,14P,15L,83L,116A,154K,170R,194S
MT190038	9247_GAG_AIM_H2	USA	2016/2018		genomic DNA	PBMC	9247_GAG_AIM_H2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6L,10I,14P,15L,80*,83L,116A,118T,154K,156R,170R,184*,194S
MT191048	9247_GAG_AIM_J10	USA	2016/2018		genomic DNA	PBMC	9247_GAG_AIM_J10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,14P,15L,83L,116A,154K,170R,194S
MT191049	9247_GAG_CD69_C19	USA	2016/2018		genomic DNA	PBMC	9247_GAG_CD69_C19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,14P,15L,83L,116A,118T,154K,170R,194S
MT190000	9247_GAG_CD69_C7	USA	2016/2018		genomic DNA	PBMC	9247_GAG_CD69_C7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,14P,15L,83L,116A,118T,154K,170R,194S
MT189998	9247_GAG_CD69_H7	USA	2016/2018		genomic DNA	PBMC	9247_GAG_CD69_H7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,14P,15L,83L,116A,154K,170R,194S
MT191050	9247_GAG_NEG_L11	USA	2016/2018		genomic DNA	PBMC	9247_GAG_NEG_L11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,14P,15L,83L,116A,118T,154K,170R,194S
MT189999	9247_MOGPl1_N4	USA	2016/2018		genomic DNA	PBMC	9247_MOGPl1_N4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,10I,14P,15L,23*,80*,83L,116A,117*,133*,137R,143K,154K,170R,175K,184*,194S
MT191051	9247_MOGPl2_B19	USA	2016/2018		genomic DNA	PBMC	9247_MOGPl2_B19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,14P,15L,83L,116A,118T,154K,170R,194S
MT190014	9247_MOGPl2_C17	USA	2016/2018		genomic DNA	PBMC	9247_MOGPl2_C17HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (msd_mutation)	1	231	6L,14P,15L,83L,116A,154K,170R,194S
MT190001	9247_MOGPl2_D3	USA	2016/2018		genomic DNA	PBMC	9247_MOGPl2_D3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,14P,15L,83L,116A,118T,154K,170R,194S
MT191052	9247_MOGPl2_E1	USA	2016/2018		genomic DNA	PBMC	9247_MOGPl2_E1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,14P,15L,83L,116A,118T,154K,170R,194S
MT190013	9247_MOGPl2_G5	USA	2016/2018		genomic DNA	PBMC	9247_MOGPl2_G5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (msd_mutation)	1	231	6L,14P,15L,83L,116A,154K,170R,194S
MT190041	9247_MOGPl2_M11	USA	2016/2018		genomic DNA	PBMC	9247_MOGPl2_M11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6L,14P,15L,83L,116A,118T,154K,170R,194S
MT191053	9247_MOGPl3_B16	USA	2016/2018		genomic DNA	PBMC	9247_MOGPl3_B16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,14P,15L,83L,116A,118T,154K,170R,194S
MT191054	9247_MOGPl3_P13	USA	2016/2018		genomic DNA	PBMC	9247_MOGPl3_P13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,14P,15L,83L,116A,118T,154K,170R,194S
MT190031	9247_SEB_AIM_E14	USA	2016/2018		genomic DNA	PBMC	9247_SEB_AIM_E14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6L,10I,14P,15L,23*,60E,80*,83L,116A,117*,118T,127R,133*,137R,143K,154K,156R,167Q,170R,184*,194S
MT191055	9247_SEB_AIM_E21	USA	2016/2018		genomic DNA	PBMC	9247_SEB_AIM_E21HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,14P,15L,83L,116A,154K,170R,194S
MT190003	9247_SEB_AIM_E8	USA	2016/2018		genomic DNA	PBMC	9247_SEB_AIM_E8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,14P,15L,23*,80*,83L,116A,118T,127E,133*,154K,170R,194S
MT190004	9247_SEB_AIM_M16	USA	2016/2018		genomic DNA	PBMC	9247_SEB_AIM_M16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,14P,15L,83L,116A,154K,170R,194S
MT190005	9247_SEB_AIMPl2_I19	USA	2016/2018		genomic DNA	PBMC	9247_SEB_AIMPl2_I19HIV-1 isolate from USAquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,14P,15L,83L,116A,154K,170R,194S
MT190032	9247_SEB_CD69_G7	USA	2016/2018		genomic DNA	PBMC	9247_SEB_CD69_G7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6L,10I,14P,15L,23*,46R,60R,61R,80*,83L,89R,116A,118T,133*,137R,154K,170R,194S
MT191056	9247_SEB_NEG_K3	USA	2016/2018		genomic DNA	PBMC	9247_SEB_NEG_K3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,14P,15L,83L,116A,154K,170R,194S
MT190033	9247_SEB_NEG_P15	USA	2016/2018		genomic DNA	PBMC	9247_SEB_NEG_P15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6L,14P,15L,23*,46R,80*,82K,83L,100K,116A,117*,127K,128K,137E,154K,170R,184*,194S
MT190015	9247_wk-2_pl1_D4	USA	2016/2018		genomic DNA	PBMC	9247_wk-2_pl1_D4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (msd_mutation)	1	231	6L,14P,15L,83L,116A,154K,170R,194S
MT190016	9247_wk-2_pl1_E22	USA	2016/2018		genomic DNA	PBMC	9247_wk-2_pl1_E22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (msd_mutation)	1	231	6L,14P,15L,83L,116A,154K,170R,194S
MT190017	9247_wk-2_pl1_I15	USA	2016/2018		genomic DNA	PBMC	9247_wk-2_pl1_I15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (msd_mutation)	1	231	6L,14P,15L,83L,116A,154K,170R,194S
MT191057	9247_wk-2_pl1_L16	USA	2016/2018		genomic DNA	PBMC	9247_wk-2_pl1_L16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,14P,15L,83L,116A,118T,154K,170R,194S
MT191058	9247_wk-2_pl1_M15	USA	2016/2018		genomic DNA	PBMC	9247_wk-2_pl1_M15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,14P,15L,83L,116A,118T,154K,170R,194S
MT191059	9247_wk-2_pl2_A14	USA	2016/2018		genomic DNA	PBMC	9247_wk-2_pl2_A14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,14P,15L,83L,116A,118T,154K,170R,194S
MT191060	9247_wk-2_pl2_B14	USA	2016/2018		genomic DNA	PBMC	9247_wk-2_pl2_B14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,14P,15L,83L,116A,118T,154K,170R,194S
MT191061	9247_wk-2_pl2_D11	USA	2016/2018		genomic DNA	PBMC	9247_wk-2_pl2_D11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,14P,15L,83L,116A,118T,154K,170R,194S
MT191063	9247_wk-2_pl2_D13	USA	2016/2018		genomic DNA	PBMC	9247_wk-2_pl2_D13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,14P,15L,83L,116A,118T,154K,170R,194S
MT190018	9247_wk-2_pl2_D19	USA	2016/2018		genomic DNA	PBMC	9247_wk-2_pl2_D19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (msd_mutation)	1	231	6L,14P,15L,83L,116A,154K,170R,194S
MT191062	9247_wk-2_pl2_D7	USA	2016/2018		genomic DNA	PBMC	9247_wk-2_pl2_D7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,14P,15L,83L,116A,118T,154K,170R,194S
MT190042	9247_wk-2_pl2_F20	USA	2016/2018		genomic DNA	PBMC	9247_wk-2_pl2_F20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6L,14P,15L,83L,116A,118T,154K,170R,194S
MT191065	9247_wk-2_pl2_H13	USA	2016/2018		genomic DNA	PBMC	9247_wk-2_pl2_H13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,14P,15L,83L,116A,154K,170R,194S
MT191064	9247_wk-2_pl2_I20	USA	2016/2018		genomic DNA	PBMC	9247_wk-2_pl2_I20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,14P,15L,83L,116A,118T,154K,170R,194S
MT191066	9247_wk-2_pl2_I6	USA	2016/2018		genomic DNA	PBMC	9247_wk-2_pl2_I6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,14P,15L,83L,116A,118T,154K,170R,194S
MT190020	9247_wk-2_pl2_L18	USA	2016/2018		genomic DNA	PBMC	9247_wk-2_pl2_L18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (msd_mutation)	1	231	6L,14P,15L,83L,116A,154K,170R,194S
MT191067	9247_wk-2_pl2_N14	USA	2016/2018		genomic DNA	PBMC	9247_wk-2_pl2_N14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,14P,15L,83L,116A,118T,154K,170R,194S
MT190034	9247_wk-2_pl2_O19	USA	2016/2018		genomic DNA	PBMC	9247_wk-2_pl2_O19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6L,14P,15L,83L,116A,118T,154K,170R,194S
MT190006	9247_wk-2_pl3_A6	USA	2016/2018		genomic DNA	PBMC	9247_wk-2_pl3_A6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,14P,15L,83L,116A,118T,154K,170R,194S
MT191069	9247_wk-2_pl3_I8	USA	2016/2018		genomic DNA	PBMC	9247_wk-2_pl3_I8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,14P,15L,83L,116A,118T,154K,170R,194S
MT190035	9247_wk-2_pl3_J13	USA	2016/2018		genomic DNA	PBMC	9247_wk-2_pl3_J13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6L,14P,15L,83L,116A,118T,154K,170R,194S
MT190019	9247_wk-2_pl3_J17	USA	2016/2018		genomic DNA	PBMC	9247_wk-2_pl3_J17HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (msd_mutation)	1	231	6L,14P,15L,83L,116A,154K,170R,194S
MT191068	9247_wk-2_pl3_K23	USA	2016/2018		genomic DNA	PBMC	9247_wk-2_pl3_K23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,14P,15L,83L,116A,118T,154K,170R,194S
MT191070	9247_wk-2_pl3_M1	USA	2016/2018		genomic DNA	PBMC	9247_wk-2_pl3_M1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,14P,15L,83L,116A,118T,154K,170R,194S
MT190022	9247_wk-2_pl3_M12	USA	2016/2018		genomic DNA	PBMC	9247_wk-2_pl3_M12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (msd_mutation)	1	231	6L,14P,15L,83L,116A,154K,170R,194S
MT191071	9247_wk-2_pl3_N7	USA	2016/2018		genomic DNA	PBMC	9247_wk-2_pl3_N7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,14P,15L,83L,116A,154K,170R,194S
MT191072	9247_wk-2_pl4_A19	USA	2016/2018		genomic DNA	PBMC	9247_wk-2_pl4_A19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,14P,15L,83L,116A,118T,154K,170R,194S
MT190021	9247_wk-2_pl4_A3	USA	2016/2018		genomic DNA	PBMC	9247_wk-2_pl4_A3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (msd_mutation)	1	231	6L,14P,15L,83L,116A,118T,154K,170R,194S
MT191028	9247_wk-2_pl4_B18	USA	2016/2018		genomic DNA	PBMC	9247_wk-2_pl4_B18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,14P,15L,83L,116A,118T,154K,170R,194S
MT191030	9247_wk-2_pl4_B4	USA	2016/2018		genomic DNA	PBMC	9247_wk-2_pl4_B4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,14P,15L,83L,116A,118T,154K,170R,194S
MT191032	9247_wk-2_pl4_B5	USA	2016/2018		genomic DNA	PBMC	9247_wk-2_pl4_B5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,14P,15L,83L,116A,118T,154K,170R,194S
MT191034	9247_wk-2_pl4_C1	USA	2016/2018		genomic DNA	PBMC	9247_wk-2_pl4_C1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,14P,15L,83L,116A,118T,154K,170R,194S
MT191037	9247_wk-2_pl4_F3	USA	2016/2018		genomic DNA	PBMC	9247_wk-2_pl4_F3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,14P,15L,83L,116A,118T,154K,170R,194S
MT190023	9247_wk-2_pl4_G15	USA	2016/2018		genomic DNA	PBMC	9247_wk-2_pl4_G15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (msd_mutation)	1	231	6L,14P,15L,83L,116A,154K,170R,194S
MT191040	9247_wk-2_pl4_G6	USA	2016/2018		genomic DNA	PBMC	9247_wk-2_pl4_G6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,14P,15L,83L,116A,118T,154K,170R,194S
MT190024	9247_wk-2_pl4_G8	USA	2016/2018		genomic DNA	PBMC	9247_wk-2_pl4_G8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (msd_mutation)	1	231	6L,14P,15L,83L,116A,154K,170R,194S
MT190026	9247_wk-2_pl4_J14	USA	2016/2018		genomic DNA	PBMC	9247_wk-2_pl4_J14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (msd_mutation)	1	231	6L,14P,15L,83L,116A,154K,170R,194S
MT191038	9247_wk-2_pl4_K22	USA	2016/2018		genomic DNA	PBMC	9247_wk-2_pl4_K22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,14P,15L,83L,116A,154K,170R,194S
MT191042	9247_wk-2_pl4_M6	USA	2016/2018		genomic DNA	PBMC	9247_wk-2_pl4_M6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,14P,15L,83L,116A,154K,170R,194S
MT190025	9247_wk-2_pl4_N9	USA	2016/2018		genomic DNA	PBMC	9247_wk-2_pl4_N9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (msd_mutation)	1	231	6L,14P,15L,83L,116A,154K,170R,194S
MT190036	9247_wk-2_pl5_B18	USA	2016/2018		genomic DNA	PBMC	9247_wk-2_pl5_B18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6L,10I,14P,15L,23*,80*,83L,116A,117*,118T,154K,170R,184*,194S,223R
MT190007	9247_wk-2_pl5_C5	USA	2016/2018		genomic DNA	PBMC	9247_wk-2_pl5_C5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,14P,15L,83L,116A,118T,154K,170R,194S
MT190027	9247_wk-2_pl5_M22	USA	2016/2018		genomic DNA	PBMC	9247_wk-2_pl5_M22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (msd_mutation)	1	231	6L,14P,15L,83L,116A,154K,170R,194S
MT191044	9247_wk-2_pl5_P12	USA	2016/2018		genomic DNA	PBMC	9247_wk-2_pl5_P12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,14P,15L,83L,116A,118T,154K,170R,194S
MT191047	9247_wk-2_pl5_P16	USA	2016/2018		genomic DNA	PBMC	9247_wk-2_pl5_P16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,14P,15L,83L,116A,118T,154K,170R,194S
MT190369	9255_CMV_AIM_B1	Germany	2016/2018		genomic DNA	PBMC	9255_CMV_AIM_B1HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190371	9255_CMV_AIM_C9	Germany	2016/2018		genomic DNA	PBMC	9255_CMV_AIM_C9HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190373	9255_CMV_AIM_I4	Germany	2016/2018		genomic DNA	PBMC	9255_CMV_AIM_I4HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190375	9255_CMV_AIM_K2	Germany	2016/2018		genomic DNA	PBMC	9255_CMV_AIM_K2HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190377	9255_CMV_AIM_L22	Germany	2016/2018		genomic DNA	PBMC	9255_CMV_AIM_L22HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190379	9255_CMV_AIM_N17	Germany	2016/2018		genomic DNA	PBMC	9255_CMV_AIM_N17HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190381	9255_CMV_CD69_B19	Germany	2016/2018		genomic DNA	PBMC	9255_CMV_CD69_B19HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190383	9255_CMV_CD69_F3	Germany	2016/2018		genomic DNA	PBMC	9255_CMV_CD69_F3HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190385	9255_CMV_CD69_K12	Germany	2016/2018		genomic DNA	PBMC	9255_CMV_CD69_K12HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190387	9255_CMV_CD69_K7	Germany	2016/2018		genomic DNA	PBMC	9255_CMV_CD69_K7HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190625	9255_CMV_CD69_N21	Germany	2016/2018		genomic DNA	PBMC	9255_CMV_CD69_N21HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome (msd_mutation)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190643	9255_CMV_NEG_A14	Germany	2016/2018		genomic DNA	PBMC	9255_CMV_NEG_A14HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome (weird)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190389	9255_CMV_NEG_A18	Germany	2016/2018		genomic DNA	PBMC	9255_CMV_NEG_A18HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190391	9255_CMV_NEG_C3	Germany	2016/2018		genomic DNA	PBMC	9255_CMV_NEG_C3HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190393	9255_CMV_NEG_C4	Germany	2016/2018		genomic DNA	PBMC	9255_CMV_NEG_C4HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,60E,68I,80*,83L,91V,100K,101R,128D,133*,134V,137R,148V,154K,180D,184*,206R,222E
MT190395	9255_CMV_NEG_E11	Germany	2016/2018		genomic DNA	PBMC	9255_CMV_NEG_E11HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190398	9255_CMV_NEG_F7	Germany	2016/2018		genomic DNA	PBMC	9255_CMV_NEG_F7HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190630	9255_CMV_NEG_G20	Germany	2016/2018		genomic DNA	PBMC	9255_CMV_NEG_G20HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome (non_functional)	1	231	6L,8R,15M,23*,27I,44A,52I,68I,80*,83L,91V,117*,128D,133*,134V,137R,148V,154K,156R,162K,180D,184*,222R
MT190399	9255_CMV_NEG_H11	Germany	2016/2018		genomic DNA	PBMC	9255_CMV_NEG_H11HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,8R,15M,23*,27I,44A,52I,68I,80*,83L,91V,100K,128D,133*,134V,148V,154K,180D,184*
MT190401	9255_CMV_NEG_I20	Germany	2016/2018		genomic DNA	PBMC	9255_CMV_NEG_I20HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190403	9255_CMV_NEG_J15	Germany	2016/2018		genomic DNA	PBMC	9255_CMV_NEG_J15HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190405	9255_CMV_NEG_K10	Germany	2016/2018		genomic DNA	PBMC	9255_CMV_NEG_K10HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190407	9255_CMV_NEG_K11	Germany	2016/2018		genomic DNA	PBMC	9255_CMV_NEG_K11HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190409	9255_CMV_NEG_K19	Germany	2016/2018		genomic DNA	PBMC	9255_CMV_NEG_K19HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190644	9255_CMV_NEG_O14	Germany	2016/2018		genomic DNA	PBMC	9255_CMV_NEG_O14HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome (weird)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190411	9255_CMV_NEG_O16	Germany	2016/2018		genomic DNA	PBMC	9255_CMV_NEG_O16HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190413	9255_CMV_NEG_P15	Germany	2016/2018		genomic DNA	PBMC	9255_CMV_NEG_P15HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190647	9255_GAG_AIM_D11	Germany	2016/2018		genomic DNA	PBMC	9255_GAG_AIM_D11HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome (weird)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190415	9255_GAG_AIM_D15	Germany	2016/2018		genomic DNA	PBMC	9255_GAG_AIM_D15HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190417	9255_GAG_AIM_E10	Germany	2016/2018		genomic DNA	PBMC	9255_GAG_AIM_E10HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,137R,148V,154K,180D
MT190419	9255_GAG_AIM_H11	Germany	2016/2018		genomic DNA	PBMC	9255_GAG_AIM_H11HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190421	9255_GAG_AIM_K14	Germany	2016/2018		genomic DNA	PBMC	9255_GAG_AIM_K14HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190423	9255_GAG_AIMPl3_G7	Germany	2016/2018		genomic DNA	PBMC	9255_GAG_AIMPl3_G7HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190425	9255_GAG_AIMPl3_N12	Germany	2016/2018		genomic DNA	PBMC	9255_GAG_AIMPl3_N12HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190427	9255_GAG_CD69_F9	Germany	2016/2018		genomic DNA	PBMC	9255_GAG_CD69_F9HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,23*,44A,52I,68I,80*,83L,91V,96I,116R,117*,128D,133*,134V,148V,151~,152~,153~,154K,180D,184*,206R,222R,223R
MT190429	9255_GAG_CD69_G22	Germany	2016/2018		genomic DNA	PBMC	9255_GAG_CD69_G22HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190431	9255_GAG_CD69_M19	Germany	2016/2018		genomic DNA	PBMC	9255_GAG_CD69_M19HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,8R,15M,23*,44A,52I,68I,80*,83L,91V,101R,128D,133*,134V,148V,154K,180D
MT190433	9255_GAG_CD69_N7	Germany	2016/2018		genomic DNA	PBMC	9255_GAG_CD69_N7HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190435	9255_GAG_NEG_B14	Germany	2016/2018		genomic DNA	PBMC	9255_GAG_NEG_B14HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT191115	9255_GAG_NEG_D11	Germany	2016/2018		genomic DNA	PBMC	9255_GAG_NEG_D11HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D,185V
MT190438	9255_GAG_NEG_D23	Germany	2016/2018		genomic DNA	PBMC	9255_GAG_NEG_D23HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190645	9255_GAG_NEG_D6	Germany	2016/2018		genomic DNA	PBMC	9255_GAG_NEG_D6HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome (weird)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190368	9255_GAG_NEG_E15	Germany	2016/2018		genomic DNA	PBMC	9255_GAG_NEG_E15HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190370	9255_GAG_NEG_E3	Germany	2016/2018		genomic DNA	PBMC	9255_GAG_NEG_E3HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190372	9255_GAG_NEG_F16	Germany	2016/2018		genomic DNA	PBMC	9255_GAG_NEG_F16HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190374	9255_GAG_NEG_F23	Germany	2016/2018		genomic DNA	PBMC	9255_GAG_NEG_F23HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190376	9255_GAG_NEG_G1	Germany	2016/2018		genomic DNA	PBMC	9255_GAG_NEG_G1HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190380	9255_GAG_NEG_G4	Germany	2016/2018		genomic DNA	PBMC	9255_GAG_NEG_G4HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190378	9255_GAG_NEG_I1	Germany	2016/2018		genomic DNA	PBMC	9255_GAG_NEG_I1HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190382	9255_GAG_NEG_I3	Germany	2016/2018		genomic DNA	PBMC	9255_GAG_NEG_I3HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190632	9255_GAG_NEG_J17	Germany	2016/2018		genomic DNA	PBMC	9255_GAG_NEG_J17HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome (non_functional)	1	231	6L,15V,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190384	9255_GAG_NEG_J7	Germany	2016/2018		genomic DNA	PBMC	9255_GAG_NEG_J7HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,125S,128D,134V,148V,154K,180D
MT190386	9255_GAG_NEG_K17	Germany	2016/2018		genomic DNA	PBMC	9255_GAG_NEG_K17HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190388	9255_GAG_NEG_K7	Germany	2016/2018		genomic DNA	PBMC	9255_GAG_NEG_K7HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190390	9255_GAG_NEG_L24	Germany	2016/2018		genomic DNA	PBMC	9255_GAG_NEG_L24HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190626	9255_GAG_NEG_M19	Germany	2016/2018		genomic DNA	PBMC	9255_GAG_NEG_M19HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome (msd_mutation)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190437	9255_GAG_NEG_M8	Germany	2016/2018		genomic DNA	PBMC	9255_GAG_NEG_M8HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,93L,128D,134V,148V,154K,180D
MT190440	9255_GAG_NEG_N16	Germany	2016/2018		genomic DNA	PBMC	9255_GAG_NEG_N16HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190442	9255_GAG_NEG_N7	Germany	2016/2018		genomic DNA	PBMC	9255_GAG_NEG_N7HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190443	9255_GAG_NEG_P23	Germany	2016/2018		genomic DNA	PBMC	9255_GAG_NEG_P23HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190394	9255_MOG_C10	Germany	2016/2018		genomic DNA	PBMC	9255_MOG_C10HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190392	9255_MOG_E1	Germany	2016/2018		genomic DNA	PBMC	9255_MOG_E1HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190396	9255_MOG_F18	Germany	2016/2018		genomic DNA	PBMC	9255_MOG_F18HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190627	9255_MOG_K6	Germany	2016/2018		genomic DNA	PBMC	9255_MOG_K6HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (msd_mutation)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT191116	9255_MOG_N12	Germany	2016/2018		genomic DNA	PBMC	9255_MOG_N12HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190397	9255_MOG_O14	Germany	2016/2018		genomic DNA	PBMC	9255_MOG_O14HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,23*,27I,44A,52I,68I,83L,91V,127E,128D,134V,148V,154K,159K,180N,212K,214I
MT190400	9255_MOG_P8	Germany	2016/2018		genomic DNA	PBMC	9255_MOG_P8HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190402	9255_MOGPl2_B18	Germany	2016/2018		genomic DNA	PBMC	9255_MOGPl2_B18HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190404	9255_MOGPl2_C15	Germany	2016/2018		genomic DNA	PBMC	9255_MOGPl2_C15HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190406	9255_MOGPl2_F24	Germany	2016/2018		genomic DNA	PBMC	9255_MOGPl2_F24HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190408	9255_MOGPl2_H4	Germany	2016/2018		genomic DNA	PBMC	9255_MOGPl2_H4HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190410	9255_MOGPl2_I7	Germany	2016/2018		genomic DNA	PBMC	9255_MOGPl2_I7HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190412	9255_MOGPl2_L14	Germany	2016/2018		genomic DNA	PBMC	9255_MOGPl2_L14HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190414	9255_MOGPl2_L19	Germany	2016/2018		genomic DNA	PBMC	9255_MOGPl2_L19HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190416	9255_MOGPl2_L7	Germany	2016/2018		genomic DNA	PBMC	9255_MOGPl2_L7HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190418	9255_MOGPl2_M8	Germany	2016/2018		genomic DNA	PBMC	9255_MOGPl2_M8HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,44A,52I,68I,80*,83L,91V,128D,133*,134V,148V,154K,180D,206R
MT190420	9255_MOGPl2_O10	Germany	2016/2018		genomic DNA	PBMC	9255_MOGPl2_O10HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190422	9255_MOGPl3_B3	Germany	2016/2018		genomic DNA	PBMC	9255_MOGPl3_B3HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190424	9255_MOGPl3_B8	Germany	2016/2018		genomic DNA	PBMC	9255_MOGPl3_B8HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190426	9255_MOGPl3_C15	Germany	2016/2018		genomic DNA	PBMC	9255_MOGPl3_C15HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190428	9255_MOGPl3_D11	Germany	2016/2018		genomic DNA	PBMC	9255_MOGPl3_D11HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT191117	9255_MOGPl3_D19	Germany	2016/2018		genomic DNA	PBMC	9255_MOGPl3_D19HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190430	9255_MOGPl3_D23	Germany	2016/2018		genomic DNA	PBMC	9255_MOGPl3_D23HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190432	9255_MOGPl3_E5	Germany	2016/2018		genomic DNA	PBMC	9255_MOGPl3_E5HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190628	9255_MOGPl3_F15	Germany	2016/2018		genomic DNA	PBMC	9255_MOGPl3_F15HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome (msd_mutation)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190434	9255_MOGPl3_G12	Germany	2016/2018		genomic DNA	PBMC	9255_MOGPl3_G12HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190436	9255_MOGPl3_H1	Germany	2016/2018		genomic DNA	PBMC	9255_MOGPl3_H1HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190439	9255_MOGPl3_J12	Germany	2016/2018		genomic DNA	PBMC	9255_MOGPl3_J12HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190648	9255_MOGPl3_K21	Germany	2016/2018		genomic DNA	PBMC	9255_MOGPl3_K21HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome (weird)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190441	9255_MOGPl3_L11	Germany	2016/2018		genomic DNA	PBMC	9255_MOGPl3_L11HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190444	9255_MOGPl3_L17	Germany	2016/2018		genomic DNA	PBMC	9255_MOGPl3_L17HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190445	9255_MOGPl3_L19	Germany	2016/2018		genomic DNA	PBMC	9255_MOGPl3_L19HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190633	9255_MOGPl3_M2	Germany	2016/2018		genomic DNA	PBMC	9255_MOGPl3_M2HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6L,15M,23*,44A,52I,68I,80*,83L,91V,116R,128D,133*,134V,148V,154K,180D,184*,222R,223R
MT190447	9255_MOGPl3_P21	Germany	2016/2018		genomic DNA	PBMC	9255_MOGPl3_P21HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190448	9255_MOGPl4_A6	Germany	2016/2018		genomic DNA	PBMC	9255_MOGPl4_A6HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT191118	9255_MOGPl4_B19	Germany	2016/2018		genomic DNA	PBMC	9255_MOGPl4_B19HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190449	9255_MOGPl4_C13	Germany	2016/2018		genomic DNA	PBMC	9255_MOGPl4_C13HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190450	9255_MOGPl4_D1	Germany	2016/2018		genomic DNA	PBMC	9255_MOGPl4_D1HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190451	9255_MOGPl4_E11	Germany	2016/2018		genomic DNA	PBMC	9255_MOGPl4_E11HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT191119	9255_MOGPl4_E6	Germany	2016/2018		genomic DNA	PBMC	9255_MOGPl4_E6HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190452	9255_MOGPl4_I20	Germany	2016/2018		genomic DNA	PBMC	9255_MOGPl4_I20HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190453	9255_MOGPl4_I8	Germany	2016/2018		genomic DNA	PBMC	9255_MOGPl4_I8HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190646	9255_MOGPl4_J13	Germany	2016/2018		genomic DNA	PBMC	9255_MOGPl4_J13HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome (weird)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190454	9255_MOGPl4_J19	Germany	2016/2018		genomic DNA	PBMC	9255_MOGPl4_J19HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190455	9255_MOGPl4_K11	Germany	2016/2018		genomic DNA	PBMC	9255_MOGPl4_K11HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190456	9255_MOGPl4_L6	Germany	2016/2018		genomic DNA	PBMC	9255_MOGPl4_L6HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190457	9255_MOGPl4_N6	Germany	2016/2018		genomic DNA	PBMC	9255_MOGPl4_N6HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91G,128D,134V,148V,154K,180D
MT190459	9255_SEB_AIM_B18	Germany	2016/2018		genomic DNA	PBMC	9255_SEB_AIM_B18HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190458	9255_SEB_AIM_F5	Germany	2016/2018		genomic DNA	PBMC	9255_SEB_AIM_F5HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT191120	9255_SEB_AIM_N3	Germany	2016/2018		genomic DNA	PBMC	9255_SEB_AIM_N3HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190460	9255_SEB_AIM_P20	Germany	2016/2018		genomic DNA	PBMC	9255_SEB_AIM_P20HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190461	9255_SEB_AIMPl2_A17	Germany	2016/2018		genomic DNA	PBMC	9255_SEB_AIMPl2_A17HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190462	9255_SEB_AIMPl2_C20	Germany	2016/2018		genomic DNA	PBMC	9255_SEB_AIMPl2_C20HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,8R,15M,23*,27I,44A,52I,68I,80*,83L,91V,100K,128D,133*,134V,148V,154K,180D,184*
MT190463	9255_SEB_AIMPl2_D21	Germany	2016/2018		genomic DNA	PBMC	9255_SEB_AIMPl2_D21HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190464	9255_SEB_AIMPl2_D7	Germany	2016/2018		genomic DNA	PBMC	9255_SEB_AIMPl2_D7HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190466	9255_SEB_AIMPl2_E24	Germany	2016/2018		genomic DNA	PBMC	9255_SEB_AIMPl2_E24HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190465	9255_SEB_AIMPl2_F15	Germany	2016/2018		genomic DNA	PBMC	9255_SEB_AIMPl2_F15HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190468	9255_SEB_AIMPl2_H19	Germany	2016/2018		genomic DNA	PBMC	9255_SEB_AIMPl2_H19HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190467	9255_SEB_AIMPl2_J19	Germany	2016/2018		genomic DNA	PBMC	9255_SEB_AIMPl2_J19HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190469	9255_SEB_AIMPl2_L12	Germany	2016/2018		genomic DNA	PBMC	9255_SEB_AIMPl2_L12HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190470	9255_SEB_AIMPl2_L7	Germany	2016/2018		genomic DNA	PBMC	9255_SEB_AIMPl2_L7HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190471	9255_SEB_AIMPl2_M14	Germany	2016/2018		genomic DNA	PBMC	9255_SEB_AIMPl2_M14HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190472	9255_SEB_AIMPl2_N1	Germany	2016/2018		genomic DNA	PBMC	9255_SEB_AIMPl2_N1HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190473	9255_SEB_AIMPl2_N21	Germany	2016/2018		genomic DNA	PBMC	9255_SEB_AIMPl2_N21HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190629	9255_SEB_AIMPl2_O1	Germany	2016/2018		genomic DNA	PBMC	9255_SEB_AIMPl2_O1HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome (msd_mutation)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190474	9255_SEB_AIMPl2_O4	Germany	2016/2018		genomic DNA	PBMC	9255_SEB_AIMPl2_O4HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190476	9255_SEB_AIMPl2_P9	Germany	2016/2018		genomic DNA	PBMC	9255_SEB_AIMPl2_P9HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190649	9255_SEB_AIMPl3_B1	Germany	2016/2018		genomic DNA	PBMC	9255_SEB_AIMPl3_B1HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome (weird)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190475	9255_SEB_AIMPl3_E4	Germany	2016/2018		genomic DNA	PBMC	9255_SEB_AIMPl3_E4HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190477	9255_SEB_AIMPl3_G1	Germany	2016/2018		genomic DNA	PBMC	9255_SEB_AIMPl3_G1HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190478	9255_SEB_AIMPl3_G9	Germany	2016/2018		genomic DNA	PBMC	9255_SEB_AIMPl3_G9HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190480	9255_SEB_AIMPl3_K24	Germany	2016/2018		genomic DNA	PBMC	9255_SEB_AIMPl3_K24HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190481	9255_SEB_AIMPl3_N1	Germany	2016/2018		genomic DNA	PBMC	9255_SEB_AIMPl3_N1HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190479	9255_SEB_AIMPl3_N18	Germany	2016/2018		genomic DNA	PBMC	9255_SEB_AIMPl3_N18HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190482	9255_SEB_AIMPl3_N6	Germany	2016/2018		genomic DNA	PBMC	9255_SEB_AIMPl3_N6HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190483	9255_SEB_CD69_B1	Germany	2016/2018		genomic DNA	PBMC	9255_SEB_CD69_B1HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	227	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D,227S
MT190485	9255_SEB_CD69_F4	Germany	2016/2018		genomic DNA	PBMC	9255_SEB_CD69_F4HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190484	9255_SEB_CD69_H3	Germany	2016/2018		genomic DNA	PBMC	9255_SEB_CD69_H3HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190487	9255_SEB_CD69_M14	Germany	2016/2018		genomic DNA	PBMC	9255_SEB_CD69_M14HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190486	9255_SEB_CD69_O2	Germany	2016/2018		genomic DNA	PBMC	9255_SEB_CD69_O2HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190488	9255_wk-2_10_A11	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_10_A11HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190489	9255_wk-2_10_A16	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_10_A16HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190490	9255_wk-2_10_A24	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_10_A24HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190492	9255_wk-2_10_C2	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_10_C2HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190491	9255_wk-2_10_C21	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_10_C21HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,23*,29K,44A,52I,68I,80*,82K,83L,91V,116R,128D,134V,148V,154K,180D,222E
MT190493	9255_wk-2_10_C8	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_10_C8HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,80*,83L,91V,116R,128D,133*,134V,148V,154K,180D,184*
MT190494	9255_wk-2_10_D15	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_10_D15HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,80*,83L,91V,128D,133*,134V,148V,154K,180D,229K
MT190495	9255_wk-2_10_F18	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_10_F18HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190634	9255_wk-2_10_F20	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_10_F20HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome (non_functional)	1	231	6L,15M,23*,44A,52I,60R,68I,80*,83L,91V,101R,106R,116R,117*,128D,133*,134V,148V,154K,156R,180D,184*,213K,220R
MT190496	9255_wk-2_10_F7	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_10_F7HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190498	9255_wk-2_10_G20	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_10_G20HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190651	9255_wk-2_10_I11	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_10_I11HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome (weird)	1	227	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D,227S
MT190635	9255_wk-2_10_K19	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_10_K19HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome (non_functional)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190497	9255_wk-2_10_K9	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_10_K9HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190499	9255_wk-2_10_L2	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_10_L2HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190500	9255_wk-2_10_M8	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_10_M8HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190501	9255_wk-2_10_N11	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_10_N11HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190652	9255_wk-2_10_N24	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_10_N24HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome (weird)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190502	9255_wk-2_10_N8	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_10_N8HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190503	9255_wk-2_11_B2	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_11_B2HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190504	9255_wk-2_11_C14	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_11_C14HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190505	9255_wk-2_11_D17	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_11_D17HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190506	9255_wk-2_11_E7	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_11_E7HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190507	9255_wk-2_11_G16	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_11_G16HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190509	9255_wk-2_11_H1	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_11_H1HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190653	9255_wk-2_11_H12	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_11_H12HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome (weird)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190508	9255_wk-2_11_H14	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_11_H14HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190654	9255_wk-2_11_H21	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_11_H21HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome (weird)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190510	9255_wk-2_11_I1	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_11_I1HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190511	9255_wk-2_11_I9	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_11_I9HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190512	9255_wk-2_11_J13	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_11_J13HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190514	9255_wk-2_11_N9	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_11_N9HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,23*,44A,52I,68I,80*,82K,83L,91V,101R,106R,116R,117*,128D,134V,148V,154K,162K,167Q,180D,184*,206R,222R,229K
MT190655	9255_wk-2_11_O2	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_11_O2HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome (weird)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190515	9255_wk-2_11_P8	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_11_P8HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190516	9255_wk-2_2_A15	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_2_A15HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190517	9255_wk-2_2_A24	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_2_A24HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190518	9255_wk-2_2_C20	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_2_C20HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190519	9255_wk-2_2_E9	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_2_E9HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190520	9255_wk-2_2_F24	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_2_F24HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190521	9255_wk-2_2_G11	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_2_G11HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190522	9255_wk-2_2_I20	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_2_I20HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190657	9255_wk-2_2_L18	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_2_L18HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome (weird)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190523	9255_wk-2_2_M15	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_2_M15HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190524	9255_wk-2_2_M2	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_2_M2HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190525	9255_wk-2_2_N14	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_2_N14HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190526	9255_wk-2_2_N24	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_2_N24HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190527	9255_wk-2_2_O15	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_2_O15HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,137E,148V,154K,180D
MT190528	9255_wk-2_3_C8	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_3_C8HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190529	9255_wk-2_3_E6	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_3_E6HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190530	9255_wk-2_3_F13	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_3_F13HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190531	9255_wk-2_3_F7	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_3_F7HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190532	9255_wk-2_3_J24	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_3_J24HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190533	9255_wk-2_3_K18	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_3_K18HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190534	9255_wk-2_3_L20	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_3_L20HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190535	9255_wk-2_3_N17	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_3_N17HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D,207L
MT190536	9255_wk-2_3_O21	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_3_O21HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190537	9255_wk-2_4_A21	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_4_A21HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190538	9255_wk-2_4_A23	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_4_A23HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190540	9255_wk-2_4_B1	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_4_B1HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190539	9255_wk-2_4_B11	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_4_B11HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190541	9255_wk-2_4_B8	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_4_B8HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190543	9255_wk-2_4_C1	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_4_C1HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190542	9255_wk-2_4_C12	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_4_C12HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190544	9255_wk-2_4_E22	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_4_E22HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190545	9255_wk-2_4_F14	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_4_F14HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190546	9255_wk-2_4_H18	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_4_H18HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190547	9255_wk-2_4_I9	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_4_I9HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190548	9255_wk-2_4_K2	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_4_K2HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190549	9255_wk-2_4_K7	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_4_K7HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190550	9255_wk-2_4_K8	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_4_K8HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190551	9255_wk-2_4_L24	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_4_L24HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190552	9255_wk-2_4_M6	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_4_M6HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190553	9255_wk-2_4_M9	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_4_M9HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190554	9255_wk-2_4_N12	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_4_N12HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190555	9255_wk-2_4_N17	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_4_N17HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190556	9255_wk-2_4_N2	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_4_N2HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190557	9255_wk-2_4_O21	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_4_O21HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190558	9255_wk-2_4_O24	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_4_O24HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190656	9255_wk-2_4_O9	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_4_O9HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190559	9255_wk-2_4_P14	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_4_P14HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190560	9255_wk-2_4_P18	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_4_P18HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190658	9255_wk-2_4_P23	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_4_P23HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome (weird)	1	231	6L,15M,44A,48I,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190561	9255_wk-2_4_P8	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_4_P8HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190562	9255_wk-2_5_C11	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_5_C11HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190563	9255_wk-2_5_C4	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_5_C4HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190564	9255_wk-2_5_D15	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_5_D15HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D,223R
MT190659	9255_wk-2_5_D22	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_5_D22HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome (weird)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190565	9255_wk-2_5_D9	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_5_D9HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190640	9255_wk-2_5_F21	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_5_F21HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome (non_functional)	1	231	6L,15M,44A,45G,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190566	9255_wk-2_5_F23	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_5_F23HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190568	9255_wk-2_5_G2	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_5_G2HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190567	9255_wk-2_5_G22	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_5_G22HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190569	9255_wk-2_5_I8	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_5_I8HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190570	9255_wk-2_5_J14	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_5_J14HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190571	9255_wk-2_5_J5	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_5_J5HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190641	9255_wk-2_5_K12	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_5_K12HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome (non_functional)	1	231	6L,15M,44A,51N,52I,68I,83L,91V,101E,128D,134V,148V,154K,180D,213K
MT190572	9255_wk-2_5_M2	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_5_M2HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190573	9255_wk-2_5_N2	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_5_N2HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190574	9255_wk-2_5_O19	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_5_O19HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190575	9255_wk-2_5_P10	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_5_P10HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190576	9255_wk-2_6_A14	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_6_A14HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190578	9255_wk-2_6_A2	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_6_A2HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190577	9255_wk-2_6_A22	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_6_A22HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,123L,128D,134V,148V,154K,180D
MT190579	9255_wk-2_6_A6	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_6_A6HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190580	9255_wk-2_6_C1	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_6_C1HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190582	9255_wk-2_6_E2	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_6_E2HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190581	9255_wk-2_6_E22	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_6_E22HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190583	9255_wk-2_6_F11	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_6_F11HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190584	9255_wk-2_6_J22	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_6_J22HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190585	9255_wk-2_6_J3	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_6_J3HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,115T,128D,134V,148V,154K,180D
MT190586	9255_wk-2_6_L21	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_6_L21HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190587	9255_wk-2_6_M16	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_6_M16HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190588	9255_wk-2_6_M18	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_6_M18HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128N,134V,148V,154K,180D
MT190589	9255_wk-2_6_M19	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_6_M19HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190590	9255_wk-2_6_N12	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_6_N12HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190591	9255_wk-2_6_N9	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_6_N9HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,11I,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190592	9255_wk-2_6_O14	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_6_O14HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190593	9255_wk-2_7_A6	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_7_A6HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190594	9255_wk-2_7_D5	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_7_D5HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190595	9255_wk-2_7_F24	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_7_F24HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190596	9255_wk-2_7_G13	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_7_G13HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190597	9255_wk-2_7_G17	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_7_G17HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190598	9255_wk-2_7_H18	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_7_H18HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190599	9255_wk-2_7_I8	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_7_I8HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190600	9255_wk-2_7_I9	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_7_I9HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,23*,44A,52I,60E,66I,68I,80*,83L,91V,96I,117*,127R,128D,133*,134V,148V,154K,156R,180D,184*,206R,213K,222K,223R
MT190601	9255_wk-2_7_M21	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_7_M21HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190602	9255_wk-2_7_N1	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_7_N1HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190661	9255_wk-2_7_O16	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_7_O16HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome (weird)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190603	9255_wk-2_7_O19	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_7_O19HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190605	9255_wk-2_8_A2	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_8_A2HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D,209V
MT190604	9255_wk-2_8_C5	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_8_C5HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,23*,44A,52I,68I,80*,83L,91V,128D,134V,148V,154K,180D,184*
MT190606	9255_wk-2_8_D16	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_8_D16HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190607	9255_wk-2_8_D3	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_8_D3HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190608	9255_wk-2_8_G10	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_8_G10HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190609	9255_wk-2_8_I22	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_8_I22HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190610	9255_wk-2_8_K6	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_8_K6HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190611	9255_wk-2_8_N5	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_8_N5HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190612	9255_wk-2_9_A17	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_9_A17HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190613	9255_wk-2_9_C15	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_9_C15HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190614	9255_wk-2_9_C22	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_9_C22HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190615	9255_wk-2_9_D12	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_9_D12HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190663	9255_wk-2_9_F16	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_9_F16HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome (weird)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190616	9255_wk-2_9_H22	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_9_H22HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190617	9255_wk-2_9_I21	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_9_I21HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190618	9255_wk-2_9_I24	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_9_I24HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190664	9255_wk-2_9_J1	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_9_J1HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190619	9255_wk-2_9_K11	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_9_K11HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190622	9255_wk-2_9_M5	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_9_M5HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190620	9255_wk-2_9_O16	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_9_O16HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190621	9255_wk-2_9_O18	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_9_O18HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190623	9255_wk-2_9_O23	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_9_O23HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190665	9255_wk-2_9_P11	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_9_P11HIV-1 isolate from Germanyquadruplex qPCR(Q4PCR) sequenced genome (weird)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190624	9255_wk-2_9_P8	Germany	2016/2018		genomic DNA	PBMC	9255_wk-2_9_P8HIV-1 isolate from Germany quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MT190667	B207_CMV_AIM_1_A2	USA	2016/2018		genomic DNA	PBMC	B207_CMV_AIM_1_A2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191122	B207_CMV_AIM_1_D21	USA	2016/2018		genomic DNA	PBMC	B207_CMV_AIM_1_D21HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190744	B207_CMV_AIM_1_F6	USA	2016/2018		genomic DNA	PBMC	B207_CMV_AIM_1_F6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6L,10I,15L,23*,27I,29K,60E,76K,80*,83L,86A,87Q,91V,92Q,96V,100K,101*,116A,120H,148V,184*,194S,229K
MT190669	B207_CMV_AIM_1_G9	USA	2016/2018		genomic DNA	PBMC	B207_CMV_AIM_1_G9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190672	B207_CMV_AIM_1_K18	USA	2016/2018		genomic DNA	PBMC	B207_CMV_AIM_1_K18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91P,96V,116A,120H,148V,194S,230I
MT190673	B207_CMV_AIM_1_O19	USA	2016/2018		genomic DNA	PBMC	B207_CMV_AIM_1_O19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91P,96V,116A,120H,148V,194S
MT191124	B207_CMV_AIM_2_A6	USA	2016/2018		genomic DNA	PBMC	B207_CMV_AIM_2_A6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190675	B207_CMV_AIM_2_C8	USA	2016/2018		genomic DNA	PBMC	B207_CMV_AIM_2_C8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S
MT191126	B207_CMV_AIM_2_H4	USA	2016/2018		genomic DNA	PBMC	B207_CMV_AIM_2_H4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191128	B207_CMV_AIM_2_K5	USA	2016/2018		genomic DNA	PBMC	B207_CMV_AIM_2_K5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190677	B207_CMV_AIM_2_K8	USA	2016/2018		genomic DNA	PBMC	B207_CMV_AIM_2_K8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,208G
MT191131	B207_CMV_AIM_2_N22	USA	2016/2018		genomic DNA	PBMC	B207_CMV_AIM_2_N22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190746	B207_CMV_AIM_3_C10	USA	2016/2018		genomic DNA	PBMC	B207_CMV_AIM_3_C10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191132	B207_CMV_AIM_3_E7	USA	2016/2018		genomic DNA	PBMC	B207_CMV_AIM_3_E7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190680	B207_CMV_AIM_3_I14	USA	2016/2018		genomic DNA	PBMC	B207_CMV_AIM_3_I14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S
MT191134	B207_CMV_AIM_4_A17	USA	2016/2018		genomic DNA	PBMC	B207_CMV_AIM_4_A17HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191136	B207_CMV_AIM_4_K22	USA	2016/2018		genomic DNA	PBMC	B207_CMV_AIM_4_K22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191138	B207_CMV_AIM_4_L2	USA	2016/2018		genomic DNA	PBMC	B207_CMV_AIM_4_L2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190681	B207_CMV_AIM_4_N17	USA	2016/2018		genomic DNA	PBMC	B207_CMV_AIM_4_N17HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190683	B207_CMV_AIM_5_D2	USA	2016/2018		genomic DNA	PBMC	B207_CMV_AIM_5_D2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190685	B207_CMV_AIM_5_K6	USA	2016/2018		genomic DNA	PBMC	B207_CMV_AIM_5_K6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191140	B207_CMV_AIM_5_N3	USA	2016/2018		genomic DNA	PBMC	B207_CMV_AIM_5_N3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190687	B207_CMV_AIM_6_A19	USA	2016/2018		genomic DNA	PBMC	B207_CMV_AIM_6_A19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190689	B207_CMV_AIM_7_A19	USA	2016/2018		genomic DNA	PBMC	B207_CMV_AIM_7_A19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190748	B207_CMV_AIM_7_N18	USA	2016/2018		genomic DNA	PBMC	B207_CMV_AIM_7_N18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190691	B207_CMV_AIM_B3	USA	2016/2018		genomic DNA	PBMC	B207_CMV_AIM_B3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,208G
MT191142	B207_CMV_AIM_C20	USA	2016/2018		genomic DNA	PBMC	B207_CMV_AIM_C20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,90L,91V,92Q,96V,116A,120H,148V,194S,230I
MT190693	B207_CMV_AIM_C8	USA	2016/2018		genomic DNA	PBMC	B207_CMV_AIM_C8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190695	B207_CMV_AIM_H16	USA	2016/2018		genomic DNA	PBMC	B207_CMV_AIM_H16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190697	B207_CMV_AIM_L14	USA	2016/2018		genomic DNA	PBMC	B207_CMV_AIM_L14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,208G,230I
MT191144	B207_CMV_AIM_N9	USA	2016/2018		genomic DNA	PBMC	B207_CMV_AIM_N9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191146	B207_CMV_AIM_O14	USA	2016/2018		genomic DNA	PBMC	B207_CMV_AIM_O14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190699	B207_CMV_AIMPl2_H6	USA	2016/2018		genomic DNA	PBMC	B207_CMV_AIMPl2_H6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190701	B207_CMV_AIMPl2_M8	USA	2016/2018		genomic DNA	PBMC	B207_CMV_AIMPl2_M8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S
MT191148	B207_CMV_CD69_E1	USA	2016/2018		genomic DNA	PBMC	B207_CMV_CD69_E1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190767	B207_CMV_CD69_G13	USA	2016/2018		genomic DNA	PBMC	B207_CMV_CD69_G13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190706	B207_CMV_CD69_H13	USA	2016/2018		genomic DNA	PBMC	B207_CMV_CD69_H13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191150	B207_CMV_CD69_K22	USA	2016/2018		genomic DNA	PBMC	B207_CMV_CD69_K22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190707	B207_CMV_CD69_K24	USA	2016/2018		genomic DNA	PBMC	B207_CMV_CD69_K24HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,23*,27I,60E,80*,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,156R,184*,194S,223R,230I
MT191152	B207_CMV_CD69_K3	USA	2016/2018		genomic DNA	PBMC	B207_CMV_CD69_K3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191155	B207_CMV_CD69_L12	USA	2016/2018		genomic DNA	PBMC	B207_CMV_CD69_L12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191156	B207_CMV_CD69_L7	USA	2016/2018		genomic DNA	PBMC	B207_CMV_CD69_L7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190768	B207_CMV_CD69_N7	USA	2016/2018		genomic DNA	PBMC	B207_CMV_CD69_N7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	24	231	24S,27I,83L,86A,87Q,91A,96V,116A,120H,148V,194S
MT191158	B207_CMV_CD69_N8	USA	2016/2018		genomic DNA	PBMC	B207_CMV_CD69_N8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190770	B207_CMV_NEG_G15	USA	2016/2018		genomic DNA	PBMC	B207_CMV_NEG_G15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S
MT191160	B207_CMV_NEG_J5	USA	2016/2018		genomic DNA	PBMC	B207_CMV_NEG_J5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190749	B207_CMV_NEG_K12	USA	2016/2018		genomic DNA	PBMC	B207_CMV_NEG_K12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190709	B207_GAG_AIM_I4	USA	2016/2018		genomic DNA	PBMC	B207_GAG_AIM_I4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191162	B207_GAG_AIM_L16	USA	2016/2018		genomic DNA	PBMC	B207_GAG_AIM_L16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,208G
MT191164	B207_GAG_CD69_B22	USA	2016/2018		genomic DNA	PBMC	B207_GAG_CD69_B22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191166	B207_GAG_CD69_B8	USA	2016/2018		genomic DNA	PBMC	B207_GAG_CD69_B8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190750	B207_GAG_CD69_C22	USA	2016/2018		genomic DNA	PBMC	B207_GAG_CD69_C22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191168	B207_GAG_CD69_D9	USA	2016/2018		genomic DNA	PBMC	B207_GAG_CD69_D9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191170	B207_GAG_CD69_E1	USA	2016/2018		genomic DNA	PBMC	B207_GAG_CD69_E1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190711	B207_GAG_CD69_E6	USA	2016/2018		genomic DNA	PBMC	B207_GAG_CD69_E6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,208G,230I
MT191172	B207_GAG_CD69_G3	USA	2016/2018		genomic DNA	PBMC	B207_GAG_CD69_G3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191174	B207_GAG_CD69_I23	USA	2016/2018		genomic DNA	PBMC	B207_GAG_CD69_I23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S
MT191176	B207_GAG_CD69_J2	USA	2016/2018		genomic DNA	PBMC	B207_GAG_CD69_J2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191178	B207_GAG_CD69_J9	USA	2016/2018		genomic DNA	PBMC	B207_GAG_CD69_J9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191180	B207_GAG_CD69_K23	USA	2016/2018		genomic DNA	PBMC	B207_GAG_CD69_K23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191182	B207_GAG_CD69_L16	USA	2016/2018		genomic DNA	PBMC	B207_GAG_CD69_L16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,204V,230I
MT191184	B207_GAG_CD69_M5	USA	2016/2018		genomic DNA	PBMC	B207_GAG_CD69_M5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191186	B207_GAG_CD69_N10	USA	2016/2018		genomic DNA	PBMC	B207_GAG_CD69_N10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191188	B207_GAG_CD69_N20	USA	2016/2018		genomic DNA	PBMC	B207_GAG_CD69_N20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191190	B207_GAG_CD69_N22	USA	2016/2018		genomic DNA	PBMC	B207_GAG_CD69_N22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191121	B207_GAG_CD69_N4	USA	2016/2018		genomic DNA	PBMC	B207_GAG_CD69_N4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191123	B207_GAG_CD69_P11	USA	2016/2018		genomic DNA	PBMC	B207_GAG_CD69_P11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191125	B207_GAG_NEG_A12	USA	2016/2018		genomic DNA	PBMC	B207_GAG_NEG_A12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190715	B207_GAG_NEG_G2	USA	2016/2018		genomic DNA	PBMC	B207_GAG_NEG_G2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,96V,116A,120H,148V,194S
MT190753	B207_GAG_NEG_K12	USA	2016/2018		genomic DNA	PBMC	B207_GAG_NEG_K12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191127	B207_MOG_E4	USA	2016/2018		genomic DNA	PBMC	B207_MOG_E4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190752	B207_MOG_G10	USA	2016/2018		genomic DNA	PBMC	B207_MOG_G10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191129	B207_MOG_N9	USA	2016/2018		genomic DNA	PBMC	B207_MOG_N9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191133	B207_MOGPl10_C4	USA	2016/2018		genomic DNA	PBMC	B207_MOGPl10_C4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191130	B207_MOGPl10_K19	USA	2016/2018		genomic DNA	PBMC	B207_MOGPl10_K19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191135	B207_MOGPl10_K20	USA	2016/2018		genomic DNA	PBMC	B207_MOGPl10_K20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191139	B207_MOGPl10_L1	USA	2016/2018		genomic DNA	PBMC	B207_MOGPl10_L1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191137	B207_MOGPl10_L10	USA	2016/2018		genomic DNA	PBMC	B207_MOGPl10_L10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190754	B207_MOGPl10_N12	USA	2016/2018		genomic DNA	PBMC	B207_MOGPl10_N12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191141	B207_MOGPl10_O10	USA	2016/2018		genomic DNA	PBMC	B207_MOGPl10_O10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191143	B207_MOGPl10_O16	USA	2016/2018		genomic DNA	PBMC	B207_MOGPl10_O16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191191	B207_MOGPl11_A12	USA	2016/2018		genomic DNA	PBMC	B207_MOGPl11_A12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,178L,194S,230I
MT191193	B207_MOGPl11_L18	USA	2016/2018		genomic DNA	PBMC	B207_MOGPl11_L18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190717	B207_MOGPl11_M17	USA	2016/2018		genomic DNA	PBMC	B207_MOGPl11_M17HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S
MT191194	B207_MOGPl11_P8	USA	2016/2018		genomic DNA	PBMC	B207_MOGPl11_P8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190719	B207_MOGPl12_E18	USA	2016/2018		genomic DNA	PBMC	B207_MOGPl12_E18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191196	B207_MOGPl12_I12	USA	2016/2018		genomic DNA	PBMC	B207_MOGPl12_I12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190755	B207_MOGPl13_C13	USA	2016/2018		genomic DNA	PBMC	B207_MOGPl13_C13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190721	B207_MOGPl13_H1	USA	2016/2018		genomic DNA	PBMC	B207_MOGPl13_H1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,182N,194S,230I
MT191147	B207_MOGPl13_K11	USA	2016/2018		genomic DNA	PBMC	B207_MOGPl13_K11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190723	B207_MOGPl13_P5	USA	2016/2018		genomic DNA	PBMC	B207_MOGPl13_P5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,87Q,91P,96V,116A,120H,148V,194S
MT191145	B207_MOGPl14_I15	USA	2016/2018		genomic DNA	PBMC	B207_MOGPl14_I15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190756	B207_MOGPl14_I17	USA	2016/2018		genomic DNA	PBMC	B207_MOGPl14_I17HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191149	B207_MOGPl14_L7	USA	2016/2018		genomic DNA	PBMC	B207_MOGPl14_L7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190724	B207_MOGPl14_O13	USA	2016/2018		genomic DNA	PBMC	B207_MOGPl14_O13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191151	B207_MOGPl14_P4	USA	2016/2018		genomic DNA	PBMC	B207_MOGPl14_P4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190727	B207_MOGPl15_A14	USA	2016/2018		genomic DNA	PBMC	B207_MOGPl15_A14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191153	B207_MOGPl15_H8	USA	2016/2018		genomic DNA	PBMC	B207_MOGPl15_H8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191154	B207_MOGPl2_L22	USA	2016/2018		genomic DNA	PBMC	B207_MOGPl2_L22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191157	B207_MOGPl2_M6	USA	2016/2018		genomic DNA	PBMC	B207_MOGPl2_M6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190729	B207_MOGPl2_O23	USA	2016/2018		genomic DNA	PBMC	B207_MOGPl2_O23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91P,96V,116A,120H,148V,194S
MT191159	B207_MOGPl2_P22	USA	2016/2018		genomic DNA	PBMC	B207_MOGPl2_P22HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191161	B207_MOGPl3_E7	USA	2016/2018		genomic DNA	PBMC	B207_MOGPl3_E7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190757	B207_MOGPl3_G5	USA	2016/2018		genomic DNA	PBMC	B207_MOGPl3_G5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190731	B207_MOGPl3_G8	USA	2016/2018		genomic DNA	PBMC	B207_MOGPl3_G8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,208G
MT190734	B207_MOGPl3_N14	USA	2016/2018		genomic DNA	PBMC	B207_MOGPl3_N14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,23*,27I,80*,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191163	B207_MOGPl4_O19	USA	2016/2018		genomic DNA	PBMC	B207_MOGPl4_O19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191165	B207_MOGPl6_A24	USA	2016/2018		genomic DNA	PBMC	B207_MOGPl6_A24HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,134V,148V,194S,230I
MT191167	B207_MOGPl6_J12	USA	2016/2018		genomic DNA	PBMC	B207_MOGPl6_J12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190758	B207_MOGPl6_K8	USA	2016/2018		genomic DNA	PBMC	B207_MOGPl6_K8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190735	B207_MOGPl6_P20	USA	2016/2018		genomic DNA	PBMC	B207_MOGPl6_P20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191169	B207_MOGPl7_B4	USA	2016/2018		genomic DNA	PBMC	B207_MOGPl7_B4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191171	B207_MOGPl7_C11	USA	2016/2018		genomic DNA	PBMC	B207_MOGPl7_C11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190668	B207_MOGPl7_F16	USA	2016/2018		genomic DNA	PBMC	B207_MOGPl7_F16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191173	B207_MOGPl7_H20	USA	2016/2018		genomic DNA	PBMC	B207_MOGPl7_H20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191175	B207_MOGPl8_A10	USA	2016/2018		genomic DNA	PBMC	B207_MOGPl8_A10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190759	B207_MOGPl8_A7	USA	2016/2018		genomic DNA	PBMC	B207_MOGPl8_A7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191177	B207_MOGPl8_C12	USA	2016/2018		genomic DNA	PBMC	B207_MOGPl8_C12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191179	B207_MOGPl8_G7	USA	2016/2018		genomic DNA	PBMC	B207_MOGPl8_G7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S
MT191181	B207_MOGPl8_L9	USA	2016/2018		genomic DNA	PBMC	B207_MOGPl8_L9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191183	B207_MOGPl9_D20	USA	2016/2018		genomic DNA	PBMC	B207_MOGPl9_D20HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191185	B207_MOGPl9_E19	USA	2016/2018		genomic DNA	PBMC	B207_MOGPl9_E19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191187	B207_MOGPl9_E7	USA	2016/2018		genomic DNA	PBMC	B207_MOGPl9_E7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191189	B207_MOGPl9_O6	USA	2016/2018		genomic DNA	PBMC	B207_MOGPl9_O6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190670	B207_Q1_C4	USA	2016/2018		genomic DNA	PBMC	B207_Q1_C4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190671	B207_Q1_I4	USA	2016/2018		genomic DNA	PBMC	B207_Q1_I4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91A,96V,116A,120H,148V,194S
MT190674	B207_Q1_M17	USA	2016/2018		genomic DNA	PBMC	B207_Q1_M17HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190676	B207_Q10_J10	USA	2016/2018		genomic DNA	PBMC	B207_Q10_J10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190679	B207_Q10_O12	USA	2016/2018		genomic DNA	PBMC	B207_Q10_O12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191192	B207_Q11_D14	USA	2016/2018		genomic DNA	PBMC	B207_Q11_D14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190682	B207_Q11_N23	USA	2016/2018		genomic DNA	PBMC	B207_Q11_N23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190760	B207_Q11_O3	USA	2016/2018		genomic DNA	PBMC	B207_Q11_O3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190684	B207_Q12_E8	USA	2016/2018		genomic DNA	PBMC	B207_Q12_E8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190686	B207_Q12_F1	USA	2016/2018		genomic DNA	PBMC	B207_Q12_F1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,208G
MT190688	B207_Q12_G15	USA	2016/2018		genomic DNA	PBMC	B207_Q12_G15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191195	B207_Q12_J11	USA	2016/2018		genomic DNA	PBMC	B207_Q12_J11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190736	B207_Q13_D6	USA	2016/2018		genomic DNA	PBMC	B207_Q13_D6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91P,96V,116A,120H,148V,194S
MT190761	B207_Q13_L17	USA	2016/2018		genomic DNA	PBMC	B207_Q13_L17HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190738	B207_Q13_N18	USA	2016/2018		genomic DNA	PBMC	B207_Q13_N18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190740	B207_Q14_I2	USA	2016/2018		genomic DNA	PBMC	B207_Q14_I2HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,46V,83L,86A,87Q,91A,96V,116A,120H,148V,194S
MT190742	B207_Q14_J3	USA	2016/2018		genomic DNA	PBMC	B207_Q14_J3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190690	B207_Q14_M6	USA	2016/2018		genomic DNA	PBMC	B207_Q14_M6HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,208G,230I
MT191197	B207_Q14_P5	USA	2016/2018		genomic DNA	PBMC	B207_Q14_P5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,27I,83L,86A,87Q,91V,96V,116A,120H,148V
MT190762	B207_Q15_A10	USA	2016/2018		genomic DNA	PBMC	B207_Q15_A10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191198	B207_Q15_D14	USA	2016/2018		genomic DNA	PBMC	B207_Q15_D14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191199	B207_Q15_M12	USA	2016/2018		genomic DNA	PBMC	B207_Q15_M12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190692	B207_Q2_B5	USA	2016/2018		genomic DNA	PBMC	B207_Q2_B5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	222	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,222E
MT190694	B207_Q2_J23	USA	2016/2018		genomic DNA	PBMC	B207_Q2_J23HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191200	B207_Q2_O14	USA	2016/2018		genomic DNA	PBMC	B207_Q2_O14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191202	B207_Q2_O7	USA	2016/2018		genomic DNA	PBMC	B207_Q2_O7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190696	B207_Q3_D9	USA	2016/2018		genomic DNA	PBMC	B207_Q3_D9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190698	B207_Q3_G5	USA	2016/2018		genomic DNA	PBMC	B207_Q3_G5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190700	B207_Q3_I18	USA	2016/2018		genomic DNA	PBMC	B207_Q3_I18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,8R,15L,23*,27I,60R,61R,80*,83L,86A,87Q,91V,92Q,96V,100K,101R,106R,116A,117*,120H,133*,137R,148V,156R,162K,167Q,184*,194S,206R,220R,222R,223R,230I
MT190704	B207_Q3_K16	USA	2016/2018		genomic DNA	PBMC	B207_Q3_K16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191201	B207_Q3_N3	USA	2016/2018		genomic DNA	PBMC	B207_Q3_N3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190708	B207_Q4_C5	USA	2016/2018		genomic DNA	PBMC	B207_Q4_C5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91P,96V,116A,120H,148V,194S,230I
MT191203	B207_Q4_E15	USA	2016/2018		genomic DNA	PBMC	B207_Q4_E15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,84N,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190710	B207_Q4_J16	USA	2016/2018		genomic DNA	PBMC	B207_Q4_J16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91P,96V,116A,120H,148V,194S
MT190716	B207_Q5_J19	USA	2016/2018		genomic DNA	PBMC	B207_Q5_J19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190718	B207_Q5_K24	USA	2016/2018		genomic DNA	PBMC	B207_Q5_K24HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190720	B207_Q5_L5	USA	2016/2018		genomic DNA	PBMC	B207_Q5_L5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190726	B207_Q6_I12	USA	2016/2018		genomic DNA	PBMC	B207_Q6_I12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191204	B207_Q6_I18	USA	2016/2018		genomic DNA	PBMC	B207_Q6_I18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190774	B207_Q7_A8	USA	2016/2018		genomic DNA	PBMC	B207_Q7_A8HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190725	B207_Q7_B19	USA	2016/2018		genomic DNA	PBMC	B207_Q7_B19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191205	B207_Q7_F10	USA	2016/2018		genomic DNA	PBMC	B207_Q7_F10HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191206	B207_Q8_O19	USA	2016/2018		genomic DNA	PBMC	B207_Q8_O19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191207	B207_Q9_I19	USA	2016/2018		genomic DNA	PBMC	B207_Q9_I19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191209	B207_SEB_AIM_C14	USA	2016/2018		genomic DNA	PBMC	B207_SEB_AIM_C14HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191208	B207_SEB_AIM_D9	USA	2016/2018		genomic DNA	PBMC	B207_SEB_AIM_D9HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190728	B207_SEB_AIM_G13	USA	2016/2018		genomic DNA	PBMC	B207_SEB_AIM_G13HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190730	B207_SEB_AIM_G3	USA	2016/2018		genomic DNA	PBMC	B207_SEB_AIM_G3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,8R,15L,23*,27I,46R,60R,80*,83L,86A,87Q,91V,92Q,96V,100K,116A,117*,120H,127R,133*,148V,156R,167Q,184*,194S,206R,220R,221I,230I
MT190732	B207_SEB_AIM_G5	USA	2016/2018		genomic DNA	PBMC	B207_SEB_AIM_G5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	230	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,228G,229Q,230G
MT191210	B207_SEB_AIM_K18	USA	2016/2018		genomic DNA	PBMC	B207_SEB_AIM_K18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191211	B207_SEB_AIM_L12	USA	2016/2018		genomic DNA	PBMC	B207_SEB_AIM_L12HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191212	B207_SEB_AIM_L16	USA	2016/2018		genomic DNA	PBMC	B207_SEB_AIM_L16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190743	B207_SEB_AIM_N1	USA	2016/2018		genomic DNA	PBMC	B207_SEB_AIM_N1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (msd_mutation)	1	231	6L,15L,27I,83L,86A,87Q,91P,96V,116A,120H,148V,194S
MT191213	B207_SEB_AIM_N18	USA	2016/2018		genomic DNA	PBMC	B207_SEB_AIM_N18HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190763	B207_SEB_AIM_O3	USA	2016/2018		genomic DNA	PBMC	B207_SEB_AIM_O3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (non_functional)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190733	B207_SEB_AIMPl3_F11	USA	2016/2018		genomic DNA	PBMC	B207_SEB_AIMPl3_F11HIV-1 isolate from USAquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190737	B207_SEB_AIMPl3_H15	USA	2016/2018		genomic DNA	PBMC	B207_SEB_AIMPl3_H15HIV-1 isolate from USAquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191214	B207_SEB_AIMPl3_H23	USA	2016/2018		genomic DNA	PBMC	B207_SEB_AIMPl3_H23HIV-1 isolate from USAquadruplex qPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190739	B207_SEB_AIMPl3_P21	USA	2016/2018		genomic DNA	PBMC	B207_SEB_AIMPl3_P21HIV-1 isolate from USAquadruplex qPCR(Q4PCR) sequenced genome(missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191216	B207_SEB_CD69_A1	USA	2016/2018		genomic DNA	PBMC	B207_SEB_CD69_A1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,208G,230I
MT191215	B207_SEB_CD69_A16	USA	2016/2018		genomic DNA	PBMC	B207_SEB_CD69_A16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191217	B207_SEB_CD69_C4	USA	2016/2018		genomic DNA	PBMC	B207_SEB_CD69_C4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191218	B207_SEB_CD69_C7	USA	2016/2018		genomic DNA	PBMC	B207_SEB_CD69_C7HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191219	B207_SEB_CD69_D11	USA	2016/2018		genomic DNA	PBMC	B207_SEB_CD69_D11HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191220	B207_SEB_CD69_D16	USA	2016/2018		genomic DNA	PBMC	B207_SEB_CD69_D16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191221	B207_SEB_CD69_D5	USA	2016/2018		genomic DNA	PBMC	B207_SEB_CD69_D5HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191222	B207_SEB_CD69_M3	USA	2016/2018		genomic DNA	PBMC	B207_SEB_CD69_M3HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,215V,230I
MT191224	B207_SEB_CD69_O15	USA	2016/2018		genomic DNA	PBMC	B207_SEB_CD69_O15HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91P,96V,116A,120H,148V,194S,230I
MT190741	B207_SEB_CD69_O16	USA	2016/2018		genomic DNA	PBMC	B207_SEB_CD69_O16HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (missing_internal_genes)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191223	B207_SEB_CD69_P19	USA	2016/2018		genomic DNA	PBMC	B207_SEB_CD69_P19HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT191225	B207_SEB_NEG_M4	USA	2016/2018		genomic DNA	PBMC	B207_SEB_NEG_M4HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (intact)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I
MT190775	B207_SEB_NEG_N1	USA	2016/2018		genomic DNA	PBMC	B207_SEB_NEG_N1HIV-1 isolate from USA quadruplexqPCR(Q4PCR) sequenced genome (weird)	1	231	6L,15L,27I,83L,86A,87Q,91V,92Q,96V,116A,120H,148V,194S,230I