<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Granier (2013) Pressure from TRIM5alpha contributes to control of HIV-1 replication by individuals expressing protective HLA-B alleles J. Virol. 87 (18), 10368-10380 (2013) 1.13e-172 56 56 Naive Plasma; PBMC Direct PCR HLA

Download sequences

AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
KC96699627C1Francegenomic RNAplasma123115L,83L,91V,110S,136M,154K,180D,225S
KC96699727C2Francegenomic RNAplasma123183L,148S
KC96699827C3Francegenomic RNAplasma12316L,83L,154K,180D
KC96699927C4Francegenomic RNAplasma12316L,83L,136M,141V,143K,180D,194S,230I
KC96700027C5Francegenomic RNAplasma12316L,27I,59I,75D,83L,87P,98D,107S,120G,123A,136M,148V,183T,225S
KC96698727NC1Francegenomic RNAplasma12316L,15L,27I,41T,83L,91V,107V,120S,132K,135V,136M,148V,149N,180D,191I,193H,208G
KC96698827NC2Francegenomic RNAplasma12316T,7H,14P,15M,27I,41T,54M,58I,71D,91N,92P,96I,107V,116A,120S,132K,135V,148V,169F,178T,203R,208S,210P
KC96698927NC3Francegenomic RNAplasma12316M,27I,83L,87Q,91V,120H,136M,141V,143K,148V,178T
KC96699027NC4Francegenomic RNAplasma12316L,27I,41A,83L,91V,120S,124T,148V,154K,225S
KC96699127NC5Francegenomic RNAplasma12316L,83L
KC96699227NC6Francegenomic RNAplasma12316A,14P,31G,33N,54M,58I,92P,107V,120S,128D,129V,132K,148V,178T,199R,200S,207T,208G,225S
KC96699327NC7Francegenomic RNAplasma12316M,27I,33N,36I,41A,83L,86A,87Q,91V,98D,120S,132K,136M,148V,154K,178T,216S
KC96699427NC8Francegenomic RNAplasma12316A,11T,14S,15M,27I,54M,58I,71D,87Q,120S,131R,136M,148V,154K,169F,178T,187D,200S,203R,208G,225S
KC96699527NC9Francegenomic RNAplasma12316M,15L,41T,83L,120H,136M,143K,148I,154K
KC96697457C1Francegenomic RNAplasma12316L,15L,27I,41A,83L,91V,110N,132K,136M,148V,191I
KC96698357C10Francegenomic RNAplasma12316A,14P,15M,27I,54M,58I,71D,83T,110N,116A,120G,128D,129L,148V,169F,171A,178T,190M,200S,203R,208G,210S,225S
KC96698457C11Francegenomic RNAplasma123114P,15L,83L,110N
KC96698557C12Francegenomic RNAplasma12316L,14P,16T,41T,83L,110N,120S,194S,225S
KC96698657C13Francegenomic RNAplasma12316L,15L,41T,71D,83L,96L,110N,116A,120H,154K,180D,225S
KC96697557C2Francegenomic RNAplasma12316M,14P,15L,31S,41T,83L,110N,120H,135V,148S
KC96697657C3Francegenomic RNAplasma12316L,14S,15L,41T,83L,112R,116D,120S,148V,180D,199R
KC96697757C4Francegenomic RNAplasma12316L,14P,71D,83L,91V,110N,154K,180D,225S
KC96697857C5Francegenomic RNAplasma12316M,15L,27I,41V,83L,91V,110N,116E,120S,124T,148V,225S
KC96697957C6Francegenomic RNAplasma12313L,6A,11A,12Y,14S,15M,27I,41T,54M,58I,68I,71D,83I,91N,92P,110N,132K,135V,139H,154K,169F,178T,191I,200S,203R,208G,225S
KC96698057C7Francegenomic RNAplasma123114P,27I,83L,110N,154K,225S
KC96698157C8Francegenomic RNAplasma123114P,83L,91V,110N,148A
KC96698257C9Francegenomic RNAplasma12316L,14S,15L,27I,29D,41T,83L,96I,110N,116T,120S,148V
KC96696157NC1Francegenomic RNAplasma12316A,11I,14P,15L,27I,31N,54M,58I,71D,92P,110N,120S,131R,148V,169F,171C,178T,200S,203R,208G,210S
KC96697057NC10Francegenomic RNAplasma12316M,15L,27I,41T,83L,86P,87Q,91V,110N,120S,148V,154K,178T,194S
KC96697157NC11Francegenomic RNAplasma12314R,6L,14P,15L,83L,110N,116A,148V,180D
KC96697257NC12Francegenomic RNAplasma12316L,14P,83L,154K,225S
KC96697357NC13Francegenomic RNAplasma12316L,14P,15L,41T,59I,83L,87Q,91V,96I,110N,116A,120H,160S,208G,210S
KC96696257NC2Francegenomic RNAplasma12316A,11I,14P,27I,91V,110N,116A,148V,178T,192H,208G,225A
KC96696357NC3Francegenomic RNAplasma12316A,11T,12Y,14S,15M,27I,47C,54M,58I,71D,92P,111P,120S,124T,131R,169F,177C,178T,187D,203R,208G,210S,225S
KC96696457NC4Francegenomic RNAplasma12316L,14P,83L,86P,87Q,96I,110N,116T,136M,149G,154K
KC96696557NC5Francegenomic RNAplasma12316A,14P,15M,27I,29D,31G,50H,54M,58I,71D,92P,110N,120S,124T,131R,134L,139H,143K,148V,154K,169F,178T,180D,203R,207Q,208G
KC96696657NC6Francegenomic RNAplasma12316M,27I,83L,110N,116A,148I
KC96696757NC7Francegenomic RNAplasma12316L,15L,27I,83L,86P,110N,120S,148V,178T,225S
KC96696857NC8Francegenomic RNAplasma12316A,14P,15L,31G,33N,54M,58I,71D,92P,96I,110N,116A,128D,148V,149G,200S,207T,208G,225S
KC96696957NC9Francegenomic RNAplasma12312V,6A,10W,11T,14P,27I,50G,54M,58I,71D,83T,92P,111P,120G,148V,169F,178T,200S,203R,208G,225S
KC966945T1Francegenomic RNAplasma12316A,14S,26A,27I,41T,54M,58I,71D,75D,83T,92P,120S,135V,148V,169F,178T,183G,203R,208G,225S
KC966954T10Francegenomic RNAplasma12316A,14S,15L,26A,41T,54S,58I,71D,83I,87Q,92P,116A,120S,148V,169F,171I,178T,180A,200S,203R,207T,208G,225S
KC966955T11Francegenomic RNAplasma12316A,11I,14S,15M,26A,27I,41T,54M,58I,71D,75D,83T,92P,120S,135V,148V,169F,178T,200S,203R,208G
KC966956T12Francegenomic RNAplasma12316A,10W,11T,14S,26A,27I,41T,54M,58I,71D,83T,92P,120S,124V,135V,148V,169F,178T,200S,203R,208G,225S
KC966957T13Francegenomic RNAplasma12312V,3L,6A,11T,12Y,14S,15M,27I,44A,54M,58I,71D,83I,91N,92P,93A,120S,148A,169F,178T,200S,203R,208G,217S
KC966958T14Francegenomic RNAplasma12316L,83L,96I,120H,136M
KC966959T15Francegenomic RNAplasma12316A,14S,15M,27I,41T,54M,58I,71D,83I,120S,135V,148V,154K,169F,178T,200S,203R,208G
KC966960T16Francegenomic RNAplasma12313L,6A,11A,12Y,14S,15M,27I,41T,54M,58I,59I,71D,91H,92P,93A,120G,123S,135V,148V,154K,169F,177S,187D,208G
KC966946T2Francegenomic RNAplasma12316A,14S,15L,27I,54M,58I,71D,92P,110N,120G,124V,131R,148V,149G,154K,169F,171C,200S,203R,207T,208G
KC966947T3Francegenomic RNAplasma12312V,6A,14S,26A,27I,41T,54M,58I,71D,78V,83A,91A,92P,120S,135V,148V,169F,171A,178T,200A,207Q,208G
KC966948T4Francegenomic RNAplasma12316L,83L,91V,110N
KC966949T5Francegenomic RNAplasma12316A,15M,27I,54M,58I,71D,83L,86P,87Q,91F,92P,96L,110S,120S,131R,148V,154K,169F,178T,187D,200N,203R,208G,210S,225S
KC966950T6Francegenomic RNAplasma12316L,44A,148V,180D
KC966951T7Francegenomic RNAplasma12316A,11T,12Y,14S,15M,27I,31S,41T,48P,54M,58I,71D,75D,83L,91F,92Q,120S,135V,169F,178T,183G,200S,203R,208G
KC966952T8Francegenomic RNAplasma12316A,11I,15M,27I,31G,36I,41T,54M,58I,71D,75D,79D,92P,111V,116A,120S,124V,135V,148V,154K,169F,177G,180D,187D,190M,203R,204S,208G,225S
KC966953T9Francegenomic RNAplasma12316L,15L,27I,41T,71D,83L,91V,115V,120S,148V,154K,180D,194S

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