<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Piantadosi (2018) Metagenomic sequencing of HIV-1 in the blood and female genital tract reveals little quasispecies diversity during acute infection J. Virol. (2018) In press 6.73e-150 11         Unpublished

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AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
MH933712HIV1_702865_mNGS-1USA2008genomic RNAplasma12316L,83L,86P,87Q,91H,92P,96L,194S
MH933705HIV1_FR004_D11_CVL-1South Africa2013genomic RNAcervico-vaginal lavagesubtype: C12316L,14P,15L,27I,41T,71D,79D,83L,87Q,91V,96I,98D,116T,148V,154K,169F,178T,180D,187D,203R,208G
MH933710HIV1_FR004_D11_plasma-1South Africa2013genomic RNAplasmasubtype: C12316L,14P,15L,27I,41T,71D,79D,83L,87Q,91V,96I,98D,116T,148V,154K,169F,178T,180D,187D,203R,208G
MH933713HIV1_FR004_D4_CVL-1South Africa2013genomic RNAcervico-vaginal lavagesubtype: C12316L,14P,15L,27I,41T,71D,79D,83L,87Q,91V,96I,98D,116T,148V,154K,169F,178T,180D,187D,203R,208G
MH933714HIV1_FR004_D4_plasma-1South Africa2013genomic RNAplasmasubtype: C12316L,14P,15L,27I,41T,71D,79D,83L,87Q,91V,96I,98D,116T,148V,154K,169F,178T,180D,187D,203R,208G
MH933704HIV1_FR006_D1_CVL-1South Africa2013genomic RNAcervico-vaginal lavagesubtype: C12316L,27I,41T,71D,83L,86A,87Q,91V,96L,116A,120A,124V,128D,136M,148V,169F,178T,183G,187D,203R,208G
MH933707HIV1_FR006_D1_plasma-1South Africa2013genomic RNAplasmasubtype: C12316L,27I,41T,71D,83L,86A,87Q,91V,96L,116A,120A,124V,128D,136M,148V,169F,178T,183G,187D,203R,208G
MH933709HIV1_FR006_D7_CVL-1South Africa2013genomic RNAcervico-vaginal lavagesubtype: C12316L,27I,41T,71D,83L,86A,87Q,91V,96L,116A,120A,124V,128D,136M,148V,169F,178T,183G,187D,203R,208G
MH933711HIV1_FR006_D7_plasma-1South Africa2013genomic RNAplasmasubtype: C12316L,27I,41T,71D,83L,86A,87Q,91V,96L,116A,120A,124V,128D,136M,148V,169F,178T,183G,187D,203R,208G
MH933708HIV1_FR014_D7_CVL-1South Africa2014genomic RNAcervico-vaginal lavagesubtype: C12316L,27I,41T,71D,83L,96L,116A,124V,128D,148V,169F,178T,180D,187D,203R,208G
MH933706HIV1_FR014_D7_plasma-1South Africa2014genomic RNAplasmasubtype: C12316L,27I,41T,71D,83L,96L,116A,124V,128D,148V,169F,178T,180D,187D,203R,208G

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