<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Kapaata (2021) HIV-1 Gag-Pol Sequences from Ugandan Early Infections Reveal Sequence Variants Associated with Elevated Replication Capacity Viruses 13 (2), 171 (2021) 6.19e-154 14          

Download sequences

AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
MW316895191639Uganda03-Apr-2008genomic DNAsubtype: AD12316L,27I,83I,87Q,120S,148V,180D,208G
MW316896191696Uganda11-Sep-2007genomic DNAsubtype: AD12312V,6A,11I,14N,15L,27I,50H,54M,58I,71D,83I,91N,92P,93V,96L,111P,115L,116Q,120S,128D,148V,169F,171A,178T,183G,200S,207T,208G
MW316897191923Uganda24-Jan-2008genomic DNAsubtype: AD12316A,15V,27I,54M,58I,71D,83L,116A,120G,128D,148V,154K,169F,178T,180D,203R,225S
MW316898191955Uganda26-Mar-2007genomic DNAsubtype: AD12316A,11I,14P,15L,27I,29D,54M,58V,71D,91P,98D,111P,116A,120G,128D,148V,154K,180D,210S,225S
MW316899191996Uganda19-Sep-2008genomic DNAsubtype: AD123114P,27I,41T,83L,87Q,112A,115M,116A,118I,120G,148V,180D,194S
MW316900191997Uganda15-Jan-2008genomic DNAsubtype: AD12316L,15L,27I,41T,83L,86A,87Q,91V,110N,120S,148V,180D,194S
MW316901192002Uganda24-Jul-2007genomic DNAsubtype: D12316L,14S,15L,27I,41T,83L,87Q,91V,120S,148V,154K,178T
MW316906193008Uganda15-Jun-2009genomic DNAsubtype: AD12316L,27I,75D,83L,91V,116A,120S,148V,171V,180D,225S
MW316907194020Uganda12-Jun-2009genomic DNAsubtype: AD12316L,27I,41T,83L,91V,118I,120G,136M,140R,143K,144L,148V,154K,162K,180D,225S
MW316908194037Uganda12-Aug-2009genomic DNAsubtype: D12316L,27I,83L,87Q,91V,110N,120G,148V,154K,180D,225S
MW316914194346Uganda31-Mar-2009genomic DNAsubtype: AD12316L,27I,41T,83L,91Q,115V,116A,120G,148V,180D,225S
MW316916194535Uganda16-Jun-2011genomic DNAsubtype: D12316L,27I,71D,83L,87Q,91V,110S,120S,148V,154K,177G,180D,205M,209~,225S
MW316920270015Uganda19-Dec-2006genomic DNAsubtype: AD12312V,6L,15L,27I,54V,79D,83I,91V,120S,136M,148V,154K,180D,208G,225S
MW316924275031Uganda05-Jun-2009genomic DNAsubtype: D12316L,15L,27I,83L,110S,116A,120S,148V,180D,208G,225S

Database

Resources

Team