<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Lovett (2017) Direct Submission PLoS ONE 12 (2), E0170548 (2017) 3.51e-170 106 11 ART PBMC SGS Reservoir

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AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
KT981988C1043v3d14-5M07-G02USA14-Jan-2013genomic DNA12316L,8R,10I,14P,23*,80*,83L,89R,100K,116R,117*,127R,133*,137R,143K,156R,180D,184*,194S,222R,223R,230I
KT981989C1043v3d14-5M07-G10USA14-Jan-2013genomic DNA12316L,8R,10I,14P,23*,80*,83L,89R,100K,116R,117*,127R,133*,137R,143K,156R,180D,184*,194S,222R,223R,230I
KT981990C1043v3d14-5M07-H02USA14-Jan-2013genomic DNA42316L,8R,10I,14P,23*,80*,83L,89R,100K,116R,117*,127R,133*,137R,143K,156R,180D,184*,194S,222R,223R,230I
KT981992C1048v2d14-5M1-B3USA17-Jun-2013genomic DNA12316L,27I,41T,83T,148V,163E,208G,225S
KT981993C1048v2d14-5M1-B4USA17-Jun-2013genomic DNA12316L,27I,41T,83T,148V,163E,208G,225S
KT981994C1048v2d14-5M4-D10USA17-Jun-2013genomic DNA12316L,27I,41T,83T,148V,163E,208G,225S
KT981995C1048v2d14-5M4-D5USA17-Jun-2013genomic DNA12316L,23*,27I,41T,46E,80*,83T,148V,163E,184*,208G,225S
KT981996C1115v1d14-02A-E05USA08-Apr-2013genomic DNA123115L,83L,91V,120H,148V,180D,225S,230I
KT981997C1115v1d14-02A-F02USA08-Apr-2013genomic DNA123115L,23*,28K,29K,71K,76K,81N,82K,83L,91V,96I,97K,98K,100K,101K,103N,113K,116E,117*,118I,120H,127K,128K,132K,133*,137K,143K,146N,148V,156R,159K,162K,166N,173K,180D,184*,185I,197N,206E,212K,213K,214I,215I,220K,222E,225S,230I
KT981998C1115v1d14-02A-F08USA08-Apr-2013genomic DNA12318R,10I,15L,23*,46R,60R,61R,80*,83L,89E,91V,96I,116R,117*,120H,128K,133*,137R,143K,148V,156R,162K,166N,167Q,173K,180D,184*,220E,222R,223S,230I
KT982010C1115v1d14-5M2-H9USA08-Apr-2013genomic DNA123115L,83L,91V,120H,148V,180D,225S,230I
KT982019C1118v1d14-5M19-D2USA04-Apr-2013genomic DNA123127I,83L,91V,148V
KT982020C1118v1d14-5M19-E4USA04-Apr-2013genomic DNA123127I,83L,91V,148V
KT982023C1368v1d14-5M2-E7USA13-May-2013genomic DNA12316A,14S,15M,23*,27I,31G,54M,58I,60R,71D,80*,82K,91A,92P,97K,110N,117*,120S,135V,148V,154K,156R,169F,178T,184*,200S,203R,222R,225S,229K
KT982024C1368v1d14-5M2-F8USA13-May-2013genomic DNA12316A,14S,15M,27I,31G,54M,58I,71D,91A,92P,110N,120S,135V,148V,154K,169F,178T,200S,203R,225S
KT982028C9003v1d14-5M01-A06USA08-Jul-2013genomic DNA12316L,27I,41T,83L,87P,91V,96L,110N,116A,120H,124V,148V,200N
KT982029C9003v1d14-5M01-A07USA08-Jul-2013genomic DNA12316L,27I,41T,83L,87P,91V,96L,110N,116A,120H,124V,148V,200N
KT982030C9003v1d14-5M01-B02USA08-Jul-2013genomic DNA12316L,27I,41T,83L,87P,91V,96L,110N,116A,120H,124V,148V,200N
KT982031C9003v1d14-5M01-B03USA08-Jul-2013genomic DNA12316L,27I,41T,83L,87P,91V,96L,110N,116A,120H,124V,148V,200N
KT982033C9003v1d14-5M01-B08USA08-Jul-2013genomic DNA12316L,27I,41T,83L,87P,91V,96L,110N,116A,120H,124V,148V,200N
KT982034C9003v1d14-5M01-B12USA08-Jul-2013genomic DNA12316L,27I,41T,83L,87P,91V,96L,110N,116A,120H,124V,148V,200N
KT982036C9003v1d14-5M02-C09USA08-Jul-2013genomic DNA12316L,23*,27I,41T,60E,80*,83L,87P,91V,96L,110N,116A,117*,120H,124V,148V,200N
KT982037C9003v1d14-5M02-D04USA08-Jul-2013genomic DNA12316L,27I,41T,83L,87P,91V,96L,110N,116A,120H,124V,148V,200N
KT982039C9003v1d14-5M02-D12USA08-Jul-2013genomic DNA12316L,23*,27I,41T,60E,80*,83L,87P,91V,96L,110N,116A,117*,120H,124V,148V,200N
KT982043C9003v1d14-5M03-E10USA08-Jul-2013genomic DNA12316L,27I,41T,83L,87P,91V,96L,110N,116A,120H,124V,148V,200N
KT982044C9003v1d14-5M03-E12USA08-Jul-2013genomic DNA12316L,27I,41T,83L,87P,91V,96L,110N,116A,120H,124V,148V,200N
KT982047C9003v1d14-5M04-E06USA08-Jul-2013genomic DNA12316L,27I,41T,83L,87P,91V,96L,110N,116A,120H,124V,148V,200N
KT982048C9003v1d14-5M05-A09USA08-Jul-2013genomic DNA12316L,27I,41T,83L,87P,91V,96L,110N,116A,120H,124V,148V,200N
KT982049C9003v1d14-5M05-A10USA08-Jul-2013genomic DNA12316L,27I,41T,83L,87P,91V,96L,110N,116A,120H,124V,148V,200N
KT982055C9003v1d14-5M05-B12USA08-Jul-2013genomic DNA12316L,27I,41T,83L,87P,91V,96L,110N,116A,120H,124V,148V,200N
KT982056C9003v1d14-5M06-A4USA08-Jul-2013genomic DNA12316L,27I,41T,83L,87P,91V,96L,110N,116A,120H,124V,148V,200N
KT982057C9003v1d14-5M06-B1USA08-Jul-2013genomic DNA12316L,8R,23*,27I,41T,80*,83L,87P,91V,96L,110N,116A,120H,124V,148V,156R,184*,200N
KT982058C9003v1d14-5M06-B2USA08-Jul-2013genomic DNA12316L,23*,27I,41T,80*,83L,87P,91V,96L,100K,110N,116A,117*,120H,124V,133*,143K,148V,156R,184*,200N,206R
KT982059C9003v1d14-5M06-B4USA08-Jul-2013genomic DNA12316L,27I,41T,83L,87P,91V,96L,110N,116A,120H,124V,148V,200N
KT982061C9003v1d14-5M08-C04USA08-Jul-2013genomic DNA12316L,27I,41T,83L,87P,91V,96L,110N,116A,120H,124V,148V,200N
KT982063C9003v1d14-5M08-C08USA08-Jul-2013genomic DNA12316L,23*,27I,41T,60E,80*,83L,87P,91V,96L,110N,116A,117*,120H,124V,148V,200N
KT982066C9003v1d14-5M10-G03USA08-Jul-2013genomic DNA12316L,27I,41T,83L,87P,91V,96L,110N,116A,120HR,124V,148V,200N
KT982068C9003v1d14-5M12-D04USA08-Jul-2013genomic DNA12316L,27I,41T,83L,87P,91V,96L,110N,116A,120H,124V,148V,200N
KT982069C9003v1d14-5M14-G04USA08-Jul-2013genomic DNA12316L,23*,27I,41T,60E,80*,83L,87P,91V,96L,110N,116A,117*,120H,124V,148V,200N
KT982072C9005v1d14-5M10-C5USA28-Aug-2013genomic DNA12116L,23*,60K,79D,80*,83L,86P,87Q,96I,98K,100K,116T,117*,120S,127R,136I,137R,167Q,178T,180D,184*,206R
KT982073C9005v1d14-5M10-D5USA28-Aug-2013genomic DNA12316L,10I,29K,51N,79D,81N,83L,86P,87Q,96I,116T,120S,127E,128K,136M,154K,178T,180N,184*,185I,214I,222K,225S,229K
KT982074H0113v4d14-5M10-A10USA26-Feb-2013genomic DNA12316M,23*,80*,83L,89R,100K,117*,154K,156R,166X,167~,168~,169~,170~,171~,172~,173~,174~,175~,176~,177~,178~,179X,194S,229K
KT982075H0113v4d14-5M10-A11USA26-Feb-2013genomic DNA12316M,8R,23*,67*Q,80*,83L,90~,91~,92~,93~,94~,95~,133*,154K,156R,171V,177C,178T,184*,194S,222R,225S,229K
KT982077H0113v4d14-5M10-B10USA26-Feb-2013genomic DNA12316M,83L,154K,156R,171V,177C,178T,194S
KT982079H0113v4d14-5M10-B4USA26-Feb-2013genomic DNA12316M,83L,154K,156R,171V,177C,178T,194S
KT982080H0113v4d14-5M10-B9USA26-Feb-2013genomic DNA12316M,83L,154K,171V,177C,178T,194S
KT982081H0113v4d14-5M13-E6USA26-Feb-2013genomic DNA12316M,8R,23*,60R,80*,83L,116R,117*,133*,137R,143K,154K,156R,171V,173K,177C,178T,184*,194S,206R,220R,223R,229K
KT982082H0113v4d14-5M13-E9USA26-Feb-2013genomic DNA12316M,23*,80*,83L,90H,100K,127R,154K,156R,171V,177C,178T,184*,194S,209AD
KT982087H0113v4d14-5M23-F1USA26-Feb-2013genomic DNA12316M,83L,154K,171V,177C,178T,194S,209AV
KT982088H0113v4d14-5M5-E10USA26-Feb-2013genomic DNA12316M,23*,45K,80*,83L,89R,117*,127R,133*,137R,154K,156R,171V,177C,178T,184*,194S,229K
KT982090H0113v4d14-5M5-F1USA26-Feb-2013genomic DNA12316M,10I,23*,80*,83L,117*,133*,143K,154K,156R,159K,171V,177C,178T,194S
KT982093H0113v4d14-5M7-H8USA26-Feb-2013genomic DNA12316M,8R,10I,23*,62P,80*,83L,116R,117*,133*,154K,156R,171V,177C,178T,184*,194S,223R,229K
KT982095H0113v6d14-01A-D1USA14-May-2013genomic DNA12316M,80*,83L,154K,156R,171V,177C,178T,194S,209AD,220R,229K
KT982098H0113v6d14-5M02-H10USA14-May-2013genomic DNA12316M,10I,23*,46R,60R,83L,117*,133*,137R,143K,154K,156R,167Q,171V,177C,178T,184*,194S,223R,229K
KT982099H0113v6d14-5M02-H5USA14-May-2013genomic DNA12316M,83L,154K,171V,177C,178T,194S
KT982102H0113v6d14-5M11-D11USA14-May-2013genomic DNA12316M,23*,59X,80*,83L,100K,101R,117*,127R,133*,137R,143K,154K,171V,177C,178T,184*,194S,206R,213K,229K
KT982103H0113v6d14-5M11-D2USA14-May-2013genomic DNA12316M,23*,80*,83L,100K,101R,117*,127R,133*,137R,143K,154K,171V,177C,178T,184*,194S,206R,213K,229K
KT982107H0113v7d14-5M01-B3USA10-Sep-2013genomic DNA12316M,83L,154K,171V,177C,178T,194S
KT982109H0113v7d14-5M01-B5USA10-Sep-2013genomic DNA12156M,83L,154K,171V,177C,178T,194S
KT982111H0113v7d14-5M02-C5USA10-Sep-2013genomic DNA12316M,23*,80*,83L,101R,116R,117*,133*,154K,171V,173K,177C,178T,194S,229K
KT982112H0113v7d14-5M02-C7USA10-Sep-2013genomic DNA12316M,23*,80*,83L,101R,116R,117*,133*,154K,171V,173K,177C,178T,194S,229K
KT982113H0113v7d14-5M02-C8USA10-Sep-2013genomic DNA12316M,23*,80*,83L,101R,116R,117*,133*,154K,171V,173K,177CY,178T,194S,229K
KT982114H0113v7d14-5M02-D2USA10-Sep-2013genomic DNA12316M,23*,80*,83L,101R,116R,117*,133*,154K,171V,173K,177C,178T,194S,229K
KT982115H0113v7d14-5M02-D3USA10-Sep-2013genomic DNA12316M,23*,80*,83L,101R,116R,117*,133*,154K,171V,173K,177C,178T,194S,229K
KT982116H0113v7d14-5M02-D9USA10-Sep-2013genomic DNA12076M,54IT,56LS,57DGNS,58ILST,59LV,60EGQR,62HQ,64AT,83L,136P,154K,171V,177C,178T,194S,198K,199Q,200L,201L,202F,203A,204C,205T,207S
KT982117H0113v7d14-5M03-E7USA10-Sep-2013genomic DNA12316M,23*,80*,83L,143K,154K,171V,177C,178T,184*,194S,229K
KT982118H0113v7d14-5M03-F5USA10-Sep-2013genomic DNA12316M,23*,80*,83L,100K,154K,156R,171V,177C,178T,184*,194S,229K
KT982119H0113v7d14-5M04-G1USA10-Sep-2013genomic DNA12176M,23*,45K,80*,83L,89R,117*,127R,133*,137R,154K,171V,177C,178T,184*,194S
KT982120H0113v7d14-5M04-G5USA10-Sep-2013genomic DNA12316M,23*,45K,80*,83L,89R,117*,127R,133*,137R,154K,156R,171V,177C,178T,184*,194S,229K
KT982121H0113v7d14-5M04-H5USA10-Sep-2013genomic DNA12316M,23*,45K,80*,83L,89R,117*,127R,133*,137R,154K,156R,171V,177C,178T,184*,194S,229K
KT982122H0113v7d14-5M07-A9USA10-Sep-2013genomic DNA12316M,10I,23*,60K,80*,83L,97K,106R,116R,117*,127R,133*,137R,143K,154K,156R,167Q,171V,177C,178T,184*,194S,206R,222R,223E,229K
KT982123H0113v7d14-5M07-B3USA10-Sep-2013genomic DNA12316M,83L,154K,171V,177C,178T,194S
KT982124H0113v7d14-5M09-C4USA10-Sep-2013genomic DNA12046M,83L,154K,156R,171V,177C,178T,194S
KT982125M0102v1d14-01A-C7USA15-Jul-2013genomic DNA22312IM,4KQ,5NS,6M,7QR,9QR,12HR,13LP,14PS,16LS,21IN,24IV,26LV,27IV,28EK,31G,33KQ,34PT,35*DEY,37IL,38PR,39LM,42AITV,45DE,46GR,47PT,50LQ,51DN,54AT,58AT,60GR,61AG,63QR,64AP,65AV,67X,68KM,69LS,71EQ,73FI,74NS,83L,96I,110N,116A,120H,154K,178T,203R,216A
KT982132M0102v1d14-5M01-E5USA15-Jul-2013genomic DNA12186M,14P,31G,33K,83L,96I,110N,116A,120H,154K,178T,203R,216A
KT982134M0102v1d14-5M01-F1USA15-Jul-2013genomic DNA12316M,14P,31G,33K,83L,96I,110N,116A,120H,154K,178T,203R,216A
KT982147M0102v1d14-5M04-A11USA15-Jul-2013genomic DNA2123131G,33K,83L,96I,110N,116A,120H,154K,178T,203R,216A
KT982155M0102v1d14-5M16-C11USA15-Jul-2013genomic DNA12316M,14P,31G,33K,83L,96I,110N,116A,120H,154T,178T,203R,216A
KT982163M0102v1d14-5M25-E04USA15-Jul-2013genomic DNA12316M,14P,31G,33K,83L,96I,110N,116A,120H,154K,178T,203R,216A
KT982164M0102v1d14-5M25-E08USA15-Jul-2013genomic DNA12316M,14P,31G,33K,83L,96I,110N,116A,120H,154K,178T,203R,216A
KT982165M0102v1d14-5M25-E09USA15-Jul-2013genomic DNA12316M,14P,31G,33K,83L,96I,110N,116A,120H,154K,178T,203R,216A
KT982166M0102v1d14-5M25-E10USA15-Jul-2013genomic DNA12316M,14P,31G,33K,83L,96I,102N,110N,116A,120H,154K,178T,203R,216A
KT982168M0102v1d14-5M25-F08USA15-Jul-2013genomic DNA12316M,14P,31G,33K,83L,96I,110N,116A,120H,154K,178T,203R,216A
KT982169M0102v1d14-5M26-A10USA15-Jul-2013genomic DNA12316M,14P,31G,33K,83L,96I,110N,116A,120H,154K,178T,203R,216A
KT982170M0102v1d14-5M26-A11USA15-Jul-2013genomic DNA12316M,14P,31G,33K,83L,96I,110N,116A,120H,154K,178T,203R,216A
KT982171M0102v1d14-5M26-A6USA15-Jul-2013genomic DNA12316M,14P,31G,33K,83L,96I,110N,116A,120H,154K,178T,203R,216A
KT982172M0102v1d14-5M26-A8USA15-Jul-2013genomic DNA12316M,14P,31G,33K,83L,96I,110N,116A,120H,154K,178T,203R,216A
KT982175M0102v1d14-5M27-G12USA15-Jul-2013genomic DNA12316M,14P,31G,33K,83L,96I,110N,116A,120H,154K,178T,203R,216A
KT982176M0102v1d14-5M27-H02USA15-Jul-2013genomic DNA12316M,14P,31G,33K,83L,96I,110N,116A,120H,154K,178T,203R,216A
KT982177M0107v1d14-01A-G2USA07-Oct-2013genomic DNA12314R,6L,41A,83L,86T,91V,116D,132K,136M,154K,180D
KT982180M0107v1d14-5M14-A11USA07-Oct-2013genomic DNA12314R,6L,41A,83L,86T,91V,116D,132K,136M,154K,180D
KT982182M0107v1d14-5M14-B2USA07-Oct-2013genomic DNA12314R,6L,41A,83L,86T,91V,116D,132K,136M,154K,180D
KT982183M0107v1d14-5M14-B4USA07-Oct-2013genomic DNA12314R,6L,41A,83L,86T,91V,116D,132K,136M,154K,180D
KT982184M0107v1d14-5M14-B9USA07-Oct-2013genomic DNA12114R,6L,41A,83L,86T,91V,116D,132K,136M,154K,180D
KT982186M0107v1d14-5M15-C10USA07-Oct-2013genomic DNA12314R,6L,41A,83L,86T,91V,116D,132K,136M,154K,180D
KT982187M0107v1d14-5M15-C12USA07-Oct-2013genomic DNA12314R,6L,41A,83L,86T,91V,116D,132K,136M,150V,154K,180D
KT982188M0107v1d14-5M15-C4USA07-Oct-2013genomic DNA12314R,6L,41A,83L,86T,91V,116D,132K,136M,154K,180D
KT982190M0107v1d14-5M15-D1USA07-Oct-2013genomic DNA12314R,6L,41A,75K,83L,86T,91V,116D,132K,136M,154K,180D
KT982193M0107v1d14-5M18-G1USA07-Oct-2013genomic DNA12314R,6L,21HN,41A,83L,86T,91V,116D,132K,136M,154K,180D
KT982195M0107v1d14-5M18-H6USA07-Oct-2013genomic DNA12314R,6L,18RT,28*Q,41A,83L,86T,91V,116D,132K,136M,154K,180D
KT982196M0107v1d14-5M20-A10USA07-Oct-2013genomic DNA12314R,6L,26LV,28EK,41A,83L,86T,91V,116D,132K,136M,154K,180D
KT982197M0107v1d14-5M20-A7USA07-Oct-2013genomic DNA12094R,6L,41A,83L,86T,91V,116D,132K,136M,154K,180D
KT982199M0110v1d14-5M04-E1USA20-Aug-2013genomic DNA12316L,83L,91V,127E,128K,154K,194S,213K
KT982200M0110v1d14-5M04-E3USA20-Aug-2013genomic DNA12186L,83L,91V,127E,128K,154K,194S,213K
KT982201M0118v1d14-5M04-C5USA26-Feb-2014genomic DNA12316L,15L,27I,41T,71D,83L,91N,92P,116A,128D,148V,154K,169F,178T,180D,187D,207T,208G
KT982202M0118v1d14-5M10-B5USA26-Feb-2014genomic DNA12316L,15L,27I,41T,60E,71D,80*,83L,91N,92P,101R,116A,117*,128D,133*,148V,154K,169F,178T,180D,184*,187D,208G,222R

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