Genbank References: capsid (p24)

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Genbank References: capsid (p24)

Authors	Title	Citation	E-value	# in Gb	#Pts	ART	Source	Cloning	StudyType
Li (2011)	Factors associated with viral rebound in HIV-1-infected individuals enrolled in a therapeutic HIV-1 gag vaccine trial	J. Infect. Dis. 203 (7), 976-983 (2011)	2.09e-170	204	110	ART	Plasma	Direct PCR; Molecular clones	Reservoir

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Accession	IsolateName	Country	Coll Date	MolType	Source	FirstAA	LastAA	MutList
GU561142	ACTG 5197 PID 101379 time poin	USA	May-2006	genomic RNA	plasma	1	231	6L,15L,27I,83L,120H,148V
GU561143	ACTG 5197 PID 101379 time poin	USA	Aug-2006	genomic RNA	plasma	1	231	6L,15L,27IV,83L,120H,148V,180DE
GU561144	ACTG 5197 PID 101846 time poin	USA	Jul-2005	genomic RNA	plasma	1	231	6L,14S,15L,83L,136M
GU561145	ACTG 5197 PID 101846 time poin	USA	Oct-2005	genomic RNA	plasma	1	231	6L,14PS,15L,16ST,83L,136LM,148IT
GU561104	ACTG 5197 PID 10660 time point	USA	Mar-2006	genomic RNA	plasma	1	231	6L,15L,83L,120H,136M,154K,194S,208G,225S
GU561105	ACTG 5197 PID 10660 time point	USA	Apr-2006	genomic RNA	plasma	1	231	6L,15L,83L,120H,136M,154K,194S,208G,225S
GU561146	ACTG 5197 PID 111322 time poin	USA	Apr-2007	genomic RNA	plasma	1	231	6L,41T,83L,91P,96L,120T,148V,180D,191I,199R,209P,216S
GU561147	ACTG 5197 PID 111322 time poin	USA	Jul-2007	genomic RNA	plasma	1	231	6L,41ST,83L,91P,120NT,148V,180D,191IV,199KR,209P,216S
GU561148	ACTG 5197 PID 111557 time poin	USA	Jan-2006	genomic RNA	plasma	1	231	6L,83L,115V,116AG,136M,141V
GU561149	ACTG 5197 PID 111728 time poin	USA	May-2006	genomic RNA	plasma	1	231	6A,14S,83L,115V,116A,154K,180D,225A,226Y,229K
GU561150	ACTG 5197 PID 111728 time poin	USA	Aug-2006	genomic RNA	plasma	1	231	6A,14S,83L,115V,116A,154K,180D,225A,226Y,229K,230IV
GU561151	ACTG 5197 PID 112062 time poin	USA	Aug-2006	genomic RNA	plasma	1	231	6L,41T,83T,120H,180D,199R
GU561152	ACTG 5197 PID 112062 time poin	USA	Nov-2006	genomic RNA	plasma	1	231	6L,41T,83T,120H,128DE,180D,199R,225GS
GU561106	ACTG 5197 PID 11651 time point	USA	Mar-2006	genomic RNA	plasma	1	231	83L,91V,136M
GU561107	ACTG 5197 PID 11651 time point	USA	May-2006	genomic RNA	plasma	1	231	6IM,83L,91V,136M,194AS,225GS
GU561108	ACTG 5197 PID 12944 time point	USA	Apr-2006	genomic RNA	plasma	1	231	6L,16T,83L,116A,128D,148V,177T,178T
GU561109	ACTG 5197 PID 12944 time point	USA	Jul-2006	genomic RNA	plasma	1	231	6L,16T,83L,116A,128D,148V,177T,178T
GU561110	ACTG 5197 PID 12984 time point	USA	Jul-2006	genomic RNA	plasma	1	231	6L,83L,87Q,96I,98D,116T,136M,216ST
GU561111	ACTG 5197 PID 12984 time point	USA	Oct-2006	genomic RNA	plasma	1	231	6L,83L,86AV,87Q,91IV,96I,98D,116AT,136M
GU561153	ACTG 5197 PID 141720 time poin	USA	May-2006	genomic RNA	plasma	1	231	6M,14P,15IL,16ST,41ST,83L,87HQ,110N,116AG,120HNRS
GU561154	ACTG 5197 PID 141720 time poin	USA	Jul-2006	genomic RNA	plasma	1	231	6M,14AP,15IL,44AS,83L,110N,116A,148IT
GU561112	ACTG 5197 PID 14875 time point	USA	Feb-2006	genomic RNA	plasma	1	231	6L,41A,83M,132K,136M
GU561113	ACTG 5197 PID 14875 time point	USA	May-2006	genomic RNA	plasma	1	231	6L,41A,83M,132K,136M
GU561155	ACTG 5197 PID 151477 time poin	USA	Jan-2007	genomic RNA	plasma	1	231	83L,91V,154K
GU561156	ACTG 5197 PID 151477 time poin	USA	Mar-2007	genomic RNA	plasma	1	231	83L,91V,136LM,154K
GU561157	ACTG 5197 PID 161116 time poin	USA	Jan-2007	genomic RNA	plasma	1	231	6L,41A,83L,110N,116A,132K,136M,154K,178T
GU561158	ACTG 5197 PID 161116 time poin	USA	Feb-2007	genomic RNA	plasma	1	231	6L,41A,83L,110N,116A,132K,136M,154K,178T
GU561159	ACTG 5197 PID 210521 time poin	USA	Jun-2006	genomic RNA	plasma	1	231	6IL,14P,15L,83L,208AG
GU561160	ACTG 5197 PID 210521 time poin	USA	Aug-2006	genomic RNA	plasma	1	231	14P,15L,83L,208G
GU561161	ACTG 5197 PID 213028 time poin	USA	Feb-2006	genomic RNA	plasma	1	231	6L,14P,17A,72A,83LV,120S,148V,180D
GU561162	ACTG 5197 PID 213028 time poin	USA	May-2006	genomic RNA	plasma	1	231	6L,14P,17A,72A,83LV,120S,148V,180D
GU561163	ACTG 5197 PID 213849 time poin	USA	Jun-2006	genomic RNA	plasma	1	231	6M,27IV,83L,87Q,91H,92P,116A,136LM,208AG
GU561164	ACTG 5197 PID 213849 time poin	USA	Sep-2006	genomic RNA	plasma	1	231	6M,27IV,44AS,83L,87Q,91H,92P,96IM,116A,136LM,208G
GU561165	ACTG 5197 PID 220977 time poin	USA	Aug-2005	genomic RNA	plasma	1	231	83L,136M
GU561166	ACTG 5197 PID 220977 time poin	USA	Oct-2005	genomic RNA	plasma	1	231	83L,136M
GU561167	ACTG 5197 PID 220982 time poin	USA	Sep-2005	genomic RNA	plasma	1	231	15L,83L,136M,154K,194S
GU561168	ACTG 5197 PID 220982 time poin	USA	Dec-2005	genomic RNA	plasma	1	231	15L,83L,136M,154K,194S
GU561169	ACTG 5197 PID 231751 time poin	USA	Jan-2007	genomic RNA	plasma	1	231	6L,83L,91N,92P,209C
GU561170	ACTG 5197 PID 232708 time poin	USA	Aug-2006	genomic RNA	plasma	1	231	6L,14P,15L,27I,41T,83L,86P,87Q,91V,98D,120S,148I,180D,208G,210S,225S
GU561171	ACTG 5197 PID 232708 time poin	USA	Aug-2006	genomic RNA	plasma	1	231	6L,14P,15L,27I,41T,83L,86P,87Q,91V,98D,120S,148IV,180D,208G,210S,225S
GU561172	ACTG 5197 PID 233147 time poin	USA	Jan-2006	genomic RNA	plasma	1	231	83L,120H,148S,154K,225AG,229KR,230IV
GU561173	ACTG 5197 PID 233147 time poin	USA	Feb-2006	genomic RNA	plasma	1	231	83L,120H,148S,154K,225AG,229KR,230IV
GU561174	ACTG 5197 PID 250002 time poin	USA	Jul-2006	genomic RNA	plasma	1	231	6L,15L,50*PQS,79D,83L,120NS,136ILM,148AV,154KR,180D
GU561175	ACTG 5197 PID 250002 time poin	USA	Sep-2006	genomic RNA	plasma	1	231	6L,15L,79D,83L,136I,148V,180D
GU561176	ACTG 5197 PID 250026 time poin	USA	Oct-2006	genomic RNA	plasma	1	231	6L,14P,41A,83L,120HN,132K,136M
GU561177	ACTG 5197 PID 250026 time poin	USA	Jan-2007	genomic RNA	plasma	1	231	6L,14P,41A,83L,120HN,132K,136M
GU561178	ACTG 5197 PID 250128 time poin	USA	Feb-2006	genomic RNA	plasma	1	231	6L,15L,41T,83L,120H,148S,154K,180D,208G
GU561179	ACTG 5197 PID 250128 time poin	USA	Jun-2006	genomic RNA	plasma	1	231	6L,15L,41T,83L,120H,148S,154KR,180D,208G
GU561180	ACTG 5197 PID 250183 time poin	USA	Dec-2005	genomic RNA	plasma	1	231	6L,83L,87Q,91V,98D,115V,120S,154K,171I
GU561181	ACTG 5197 PID 250183 time poin	USA	Mar-2006	genomic RNA	plasma	1	231	6L,83L,87Q,91V,98D,154K,171I
GU561182	ACTG 5197 PID 250289 time poin	USA	Jan-2007	genomic RNA	plasma	1	231	6L,83LV
GU561183	ACTG 5197 PID 250289 time poin	USA	Apr-2007	genomic RNA	plasma	1	231	6L,83LV,160PS
GU561184	ACTG 5197 PID 250647 time poin	USA	Feb-2006	genomic RNA	plasma	1	231	27I,83L,120H,128D,136M,148V,180DE,225S
GU561185	ACTG 5197 PID 250647 time poin	USA	May-2006	genomic RNA	plasma	1	231	27I,83L,120H,128D,136M,148V,225S
GU561186	ACTG 5197 PID 250760 time poin	USA	Feb-2006	genomic RNA	plasma	1	231	6L
GU561187	ACTG 5197 PID 250760 time poin	USA	Apr-2006	genomic RNA	plasma	1	231	6L,15IL,27IV,83LV,116AG,148V,178ST,208AG
GU561188	ACTG 5197 PID 250950 time poin	USA	Jul-2005	genomic RNA	plasma	1	231	83L,86A,87Q,96I,116T,148A
GU561189	ACTG 5197 PID 250950 time poin	USA	Oct-2005	genomic RNA	plasma	1	231	83L,86A,87Q,96I,98DE,116T,148A
GU561190	ACTG 5197 PID 250979 time poin	USA	Jun-2005	genomic RNA	plasma	1	231	27I,83L,120H,128D,136M,148V,176LQ,180D,225S
GU561191	ACTG 5197 PID 250979 time poin	USA	Sep-2005	genomic RNA	plasma	1	231	27I,83L,120H,128D,136IM,148V,180D,225S,230IV
GU561192	ACTG 5197 PID 251210 time poin	USA	Dec-2005	genomic RNA	plasma	1	231	6M,83L,91V,136M,139H
GU561193	ACTG 5197 PID 251262 time poin	USA	Jul-2005	genomic RNA	plasma	1	231	6L,27I,50G,83L,91V,111LP,116A,120A,128D,154K
GU561194	ACTG 5197 PID 251262 time poin	USA	Nov-2005	genomic RNA	plasma	2	231	6L,15L,27I,50S,83L,91V,111P,116A,120A,128D,154K
GU561195	ACTG 5197 PID 251333 time poin	USA	Jul-2005	genomic RNA	plasma	1	231	83L,87Q,91V,148A,208G
GU561196	ACTG 5197 PID 251333 time poin	USA	Oct-2005	genomic RNA	plasma	1	231	83L,87HQ,91V,148A,208G
GU561197	ACTG 5197 PID 251541 time poin	USA	Feb-2006	genomic RNA	plasma	1	231	6L,83L,154K,178T
GU561198	ACTG 5197 PID 251541 time poin	USA	May-2006	genomic RNA	plasma	1	231	6L,83L,154K,160PS,178ST
GU561199	ACTG 5197 PID 251547 time poin	USA	Jul-2005	genomic RNA	plasma	1	231	6L,15L,41AS,68IM,83L,87Q,91V,96L,116AG,120H,132KR,136M,148IT,208G,213D
GU561200	ACTG 5197 PID 251547 time poin	USA	Sep-2005	genomic RNA	plasma	1	231	6L,15L,41AST,83L,87Q,91V,96L,116A,120H,136M,143KR,146CS,148I,208G,213D
GU561201	ACTG 5197 PID 251607 time poin	USA	Sep-2005	genomic RNA	plasma	1	231	6L,15L,83L,110N,120H,208G
GU561202	ACTG 5197 PID 251607 time poin	USA	Dec-2005	genomic RNA	plasma	1	231	6L,15L,83L,110N,120H,208G
GU561203	ACTG 5197 PID 252348 time poin	USA	Nov-2006	genomic RNA	plasma	1	231	6L,14P,15L,83L,120H,208G
GU561204	ACTG 5197 PID 252348 time poin	USA	Feb-2007	genomic RNA	plasma	1	231	6L,14P,15L,83L,120H,208AG
GU561205	ACTG 5197 PID 253134 time poin	USA	Aug-2006	genomic RNA	plasma	1	231	6H,14P,16T,31N,41T,96IM,116A,180D,210S
GU561206	ACTG 5197 PID 253134 time poin	USA	Sep-2006	genomic RNA	plasma	1	231	6H,14P,16T,31N,41T,116A,180D,210S
GU561207	ACTG 5197 PID 253284 time poin	USA	Aug-2006	genomic RNA	plasma	1	231	6L,83L,154K,178T
GU561208	ACTG 5197 PID 253284 time poin	USA	Oct-2006	genomic RNA	plasma	1	231	6L,83L,154K,178T
GU561209	ACTG 5197 PID 253517 time poin	USA	Mar-2007	genomic RNA	plasma	1	231	15L,83L,87Q,96I,110N,116A,136M
GU561210	ACTG 5197 PID 253517 time poin	USA	May-2007	genomic RNA	plasma	1	231	15L,83L,87Q,96I,110N,116A,136M
GU561211	ACTG 5197 PID 253518 time poin	USA	Dec-2006	genomic RNA	plasma	1	231	6L,15L,27I,83L,110N,116A,148V,178T,208G
GU561212	ACTG 5197 PID 253518 time poin	USA	Feb-2007	genomic RNA	plasma	1	231	6L,15L,27I,83L,110N,116A,148V,178T,208G
GU561213	ACTG 5197 PID 254061 time poin	USA	Jun-2005	genomic RNA	plasma	1	231	6IV,68I,83L,120H,128D,180D,194S
GU561214	ACTG 5197 PID 254061 time poin	USA	Sep-2005	genomic RNA	plasma	1	231	6IV,68I,83L,120H,128D,180D,194S
GU561215	ACTG 5197 PID 254076 time poin	USA	Jul-2005	genomic RNA	plasma	1	231	15L,41T,96I,116T,154K,180D,208G,210S,225T,230I
GU561216	ACTG 5197 PID 254076 time poin	USA	Aug-2005	genomic RNA	plasma	1	231	15L,41T,96I,116T,154K,180D,208G,210S,225T,230I
GU561217	ACTG 5197 PID 262227 time poin	USA	Apr-2006	genomic RNA	plasma	1	231	6L,41T,83L,116A,124V,148S,154K,180D,208G,225S
GU561305	ACTG 5197 PID 262227 time poin	USA	Feb-2006	genomic RNA	plasma	1	231	6L,41T,83L,116A,124V,148S,154K,180D,208G,225S
GU561218	ACTG 5197 PID 263118 time poin	USA	Nov-2005	genomic RNA	plasma	1	231	14P,44A,79DE,83L,87HQ,91IV,116A,124V,148V,180D,225GS,229KR,230I,231M
GU561219	ACTG 5197 PID 263118 time poin	USA	Feb-2006	genomic RNA	plasma	1	231	14P,44A,79DE,83L,116A,120HN,124IV,148V,180D,225S,229KR,230I,231M
GU561220	ACTG 5197 PID 272430 time poin	USA	Feb-2007	genomic RNA	plasma	1	231	6M,27I,83L,148I,225S
GU561221	ACTG 5197 PID 272430 time poin	USA	May-2007	genomic RNA	plasma	1	231	6M,27I,83L,148I,225S
GU561222	ACTG 5197 PID 272669 time poin	USA	Feb-2007	genomic RNA	plasma	1	231	83L,91V,148A
GU561223	ACTG 5197 PID 272669 time poin	USA	Apr-2007	genomic RNA	plasma	1	231	83L,91V,148A
GU561224	ACTG 5197 PID 282032 time poin	USA	Apr-2006	genomic RNA	plasma	1	231	6L,83LV,154KR
GU561306	ACTG 5197 PID 282032 time poin	USA	Jan-2006	genomic RNA	plasma	1	231	6L,83LV,154KR
GU561225	ACTG 5197 PID 282225 time poin	USA	Jun-2006	genomic RNA	plasma	1	231	6L,27I,83L,91V,98D,120S,148V,171V,180D
GU561226	ACTG 5197 PID 282225 time poin	USA	Oct-2006	genomic RNA	plasma	1	231	6L,27I,83L,91V,98D,120S,148V,171V,180D
GU561227	ACTG 5197 PID 291110 time poin	USA	Jan-2006	genomic RNA	plasma	1	231	6A,11IM,83L,120HN,136M,154K,178T,208AG,225A
GU561228	ACTG 5197 PID 291110 time poin	USA	Mar-2006	genomic RNA	plasma	1	231	6A,11IM,83L,120HN,136M,154K,178T,208AG,225A
GU561229	ACTG 5197 PID 291288 time poin	USA	Jul-2006	genomic RNA	plasma	1	231	6L,15L,27I,83L,110S,116A,148I,208G
GU561230	ACTG 5197 PID 291288 time poin	USA	Oct-2006	genomic RNA	plasma	1	231	6L,15L,27I,83L,110S,116A,148I,208G
GU561231	ACTG 5197 PID 291295 time poin	USA	Apr-2006	genomic RNA	plasma	1	231	6L,14P,83L,120H,128D,136M,180D,194S
GU561232	ACTG 5197 PID 291295 time poin	USA	Jun-2006	genomic RNA	plasma	1	231	6L,14P,83L,120H,128D,136M,180D,194S
GU561233	ACTG 5197 PID 320174 time poin	USA	Oct-2006	genomic RNA	plasma	1	231	6M,41T,71D,83L,91V,120S,124M,154K,179A,180D,183G,208G
GU561234	ACTG 5197 PID 320174 time poin	USA	Dec-2006	genomic RNA	plasma	1	231	6M,41T,71D,83L,91V,120S,124M,154K,179A,180D,183G,208G,230IV
GU561235	ACTG 5197 PID 321430 time poin	USA	Apr-2007	genomic RNA	plasma	1	231	6L,14P,15M,17A,27I,68I,83L,110N,120H,128D,148V,180D
GU561236	ACTG 5197 PID 321440 time poin	USA	Jun-2006	genomic RNA	plasma	1	231	6L,41T,91A,120S,180D,210S
GU561237	ACTG 5197 PID 321440 time poin	USA	Jul-2006	genomic RNA	plasma	1	231	6L,27I,41T,91AV,120S,210S
GU561238	ACTG 5197 PID 321455 time poin	USA	Dec-2005	genomic RNA	plasma	1	231	6L,14P,15L,41T,83L,91V,110N,116A,120S,180D,213D
GU561239	ACTG 5197 PID 321455 time poin	USA	Mar-2006	genomic RNA	plasma	1	231	6L,14P,15L,41T,83L,91V,110N,116A,120S,180D,210S,213DE
GU561240	ACTG 5197 PID 321468 time poin	USA	Jan-2006	genomic RNA	plasma	1	231	6L,15L,41T,83L,120H,148A,180D,207A,208G
GU561241	ACTG 5197 PID 321468 time poin	USA	Apr-2006	genomic RNA	plasma	1	231	6L,15L,41T,83L,120H,148A,180D,207A,208G
GU561242	ACTG 5197 PID 321531 time poin	USA	Feb-2006	genomic RNA	plasma	1	231	6L,83L,115V,116A,120A,123A,170R,225S
GU561307	ACTG 5197 PID 321531 time poin	USA	Apr-2006	genomic RNA	plasma	1	231	6L,83L,115V,116A,120A,123A,170R,225S
GU561243	ACTG 5197 PID 321741 time poin	USA	Nov-2005	genomic RNA	plasma	1	231	6L,14P,15L,83L,120H,178T,208G,230IV
GU561244	ACTG 5197 PID 321741 time poin	USA	Jan-2006	genomic RNA	plasma	1	231	6L,14P,15L,83L,120H,178T,208G
GU561245	ACTG 5197 PID 321778 time poin	USA	Jun-2006	genomic RNA	plasma	1	231	6L
GU561246	ACTG 5197 PID 321778 time poin	USA	Aug-2006	genomic RNA	plasma	1	231	6L
GU561247	ACTG 5197 PID 373794 time poin	USA	Nov-2005	genomic RNA	plasma	1	231	83L,136M,194S
GU561248	ACTG 5197 PID 373794 time poin	USA	Feb-2006	genomic RNA	plasma	1	231	83L,136M,194S
GU561249	ACTG 5197 PID 373829 time poin	USA	Sep-2006	genomic RNA	plasma	1	231	6M,14S,41A,83L,87HQ,91V,98D,120S,124IV,125Q
GU561250	ACTG 5197 PID 373835 time poin	USA	Jun-2006	genomic RNA	plasma	1	231	6M,83L,120H,225S,229K,230I,231M
GU561251	ACTG 5197 PID 373835 time poin	USA	Sep-2006	genomic RNA	plasma	1	231	6M,83L,120H,178ST,225S,229K,230I,231M
GU561252	ACTG 5197 PID 373840 time poin	USA	Dec-2006	genomic RNA	plasma	1	231	83L,87Q,96I,110N,116A
GU561253	ACTG 5197 PID 373840 time poin	USA	Jan-2007	genomic RNA	plasma	1	231	14P,44AS,83L,87Q,96I,110N,116AT
GU561254	ACTG 5197 PID 381574 time poin	USA	Jan-2006	genomic RNA	plasma	1	231	6L,83L,96I,116A,194S,230I
GU561255	ACTG 5197 PID 381574 time poin	USA	Apr-2006	genomic RNA	plasma	1	231	6L,83L,96I,116A,194S,230I
GU561256	ACTG 5197 PID 381599 time poin	USA	Feb-2006	genomic RNA	plasma	1	231	6L,83L
GU561257	ACTG 5197 PID 381599 time poin	USA	May-2006	genomic RNA	plasma	1	231	6L,83L,178ST
GU561258	ACTG 5197 PID 381612 time poin	USA	Dec-2005	genomic RNA	plasma	1	231	6M,83L,120H,230I
GU561259	ACTG 5197 PID 381612 time poin	USA	Apr-2006	genomic RNA	plasma	1	231	6M,83L,120H,230I
GU561260	ACTG 5197 PID 381614 time poin	USA	Dec-2005	genomic RNA	plasma	1	231	6M,14P,79D,83L,91V,120H,154K,171I
GU561261	ACTG 5197 PID 381614 time poin	USA	Mar-2006	genomic RNA	plasma	1	231	6M,14P,79D,83L,91V,120H,154K,171I
GU561262	ACTG 5197 PID 381616 time poin	USA	Jan-2006	genomic RNA	plasma	1	231	4QR,6L,14AP,15IL,83L,110NT,115IV,116DEG,120H,154K,178T
GU561263	ACTG 5197 PID 381616 time poin	USA	Apr-2006	genomic RNA	plasma	1	231	6L,14P,15IL,44A,83L,110N,120H,154K,178T
GU561264	ACTG 5197 PID 381619 time poin	USA	Jan-2006	genomic RNA	plasma	1	231	6L,27I,41T,71D,83M,91N,120S,154K,180D
GU561265	ACTG 5197 PID 381619 time poin	USA	Apr-2006	genomic RNA	plasma	1	231	6L,27I,41T,71D,83M,91N,120S,154K,180D
GU561266	ACTG 5197 PID 381624 time poin	USA	Feb-2006	genomic RNA	plasma	1	231	6M,15L,27I,83L,91IV,110N,116A,148V,178ST
GU561267	ACTG 5197 PID 381624 time poin	USA	May-2006	genomic RNA	plasma	1	231	6M,14AP,15L,27I,83L,91V,110N,116A,148V,178ST,225GS
GU561268	ACTG 5197 PID 381628 time poin	USA	Feb-2006	genomic RNA	plasma	1	231	83L,148A,225S
GU561269	ACTG 5197 PID 381629 time poin	USA	Mar-2006	genomic RNA	plasma	1	231	27I,83L,87P,91V,148V
GU561270	ACTG 5197 PID 381629 time poin	USA	Jun-2006	genomic RNA	plasma	1	231	27I,83L,87P,91V,120NS,148AV
GU561271	ACTG 5197 PID 381650 time poin	USA	Jul-2006	genomic RNA	plasma	1	231	6L,14P,15L,27I,36I,79D,83L,86A,87Q,110N,120S,148V
GU561272	ACTG 5197 PID 381650 time poin	USA	Sep-2006	genomic RNA	plasma	1	231	6L,14P,15L,27I,36I,79D,83L,86A,87Q,110N,120S,148V
GU561273	ACTG 5197 PID 381658 time poin	USA	Jul-2006	genomic RNA	plasma	1	231	4R,6L,14S,83M,116D,120H,178T,180D
GU561274	ACTG 5197 PID 381658 time poin	USA	Oct-2006	genomic RNA	plasma	1	231	4R,6IL,14S,83M,116D,120H,154KR,178ST,180D
GU561114	ACTG 5197 PID 44702 time point	USA	Sep-2006	genomic RNA	plasma	1	231	6L,44AS,45DE,83L,148V,180D,230I
GU561115	ACTG 5197 PID 44702 time point	USA	Nov-2006	genomic RNA	plasma	1	231	6L,44A,45D,83L,148V,178ST,180D,230I
GU561116	ACTG 5197 PID 44923 time point	USA	May-2006	genomic RNA	plasma	1	231	6L,15L,41T,83L,87Q,91V,96I,110N,116A,120H,154K,180D,208G,229KR
GU561117	ACTG 5197 PID 44924 time point	USA	Apr-2006	genomic RNA	plasma	1	231	6L,14P,27I,83M,96IM,116A,120HN,124V,146CRS,148AV,149GS,154KR,171V,180D,225S
GU561118	ACTG 5197 PID 44924 time point	USA	Jul-2006	genomic RNA	plasma	1	231	6L,14P,27I,83M,116A,124V,146R,148S,154K,171V,180D,225S
GU561275	ACTG 5197 PID 461607 time poin	USA	Jul-2006	genomic RNA	plasma	1	231	6M,83L,154K,178T
GU561276	ACTG 5197 PID 461609 time poin	USA	Jul-2006	genomic RNA	plasma	1	231	6M,14P,41T,83L,135V,136M,154K,171V,180D
GU561277	ACTG 5197 PID 461609 time poin	USA	Oct-2006	genomic RNA	plasma	1	231	6M,14P,41T,83L,135V,136M,154K,171V,180D
GU561119	ACTG 5197 PID 51079 time point	USA	Aug-2005	genomic RNA	plasma	1	231	6L,14P,44A,83L,110N,180DE
GU561120	ACTG 5197 PID 51079 time point	USA	Oct-2005	genomic RNA	plasma	1	231	6L,14P,44A,83L,110N,180D
GU561278	ACTG 5197 PID 520250 time poin	USA	Jul-2005	genomic RNA	plasma	1	231	6LM,14PS,15IL,17AP,41T,91V,120NS,128DE,148AITV,180D
GU561279	ACTG 5197 PID 520250 time poin	USA	Aug-2005	genomic RNA	plasma	1	231	6LM,14PS,15IL,17AP,41T,91V,120NS,124IS,128DE,148AITV,180D
GU561280	ACTG 5197 PID 520400 time poin	USA	Aug-2006	genomic RNA	plasma	1	231	83L,91V,116A,118I,208G
GU561281	ACTG 5197 PID 520400 time poin	USA	Nov-2006	genomic RNA	plasma	1	231	83L,91V,116A,118I,208G
GU561282	ACTG 5197 PID 520438 time poin	USA	Feb-2006	genomic RNA	plasma	1	231	27IV,83L,116N,148A,208G
GU561283	ACTG 5197 PID 520438 time poin	USA	May-2006	genomic RNA	plasma	1	231	83L,116N,148A,208G
GU561284	ACTG 5197 PID 520904 time poin	USA	Sep-2006	genomic RNA	plasma	1	231	6L,14P,44A,194AV
GU561285	ACTG 5197 PID 520904 time poin	USA	Oct-2006	genomic RNA	plasma	1	231	6L,14P,44A
GU561286	ACTG 5197 PID 540321 time poin	USA	Dec-2005	genomic RNA	plasma	1	231	6L,14P,15L,31N,41T,59I,83L,110N,116A,120S,148I,180D
GU561287	ACTG 5197 PID 540321 time poin	USA	Mar-2006	genomic RNA	plasma	1	231	6L,14P,15L,31N,41T,59I,83L,110N,116A,120S,148I,180D
GU561288	ACTG 5197 PID 541009 time poin	USA	Jan-2006	genomic RNA	plasma	1	231	6M,14P,83L,116A
GU561289	ACTG 5197 PID 541009 time poin	USA	Apr-2006	genomic RNA	plasma	1	231	6M,14P,83L,116A
GU561290	ACTG 5197 PID 541237 time poin	USA	Sep-2006	genomic RNA	plasma	1	231	6L,83L,194AS,208AG,230IV
GU561291	ACTG 5197 PID 541237 time poin	USA	Dec-2006	genomic RNA	plasma	1	231	6L,83L,194S,208G,230IV
GU561292	ACTG 5197 PID 541414 time poin	USA	Aug-2006	genomic RNA	plasma	1	231	6L,15L,41T,83L,148V,152E,180D
GU561293	ACTG 5197 PID 541414 time poin	USA	Oct-2006	genomic RNA	plasma	1	231	6L,15L,41T,83L,148V,152E,180D
GU561294	ACTG 5197 PID 541421 time poin	USA	Jun-2006	genomic RNA	plasma	1	231	6L,14P,15L,27I,71D,83L,87Q,96I,110N,116A,120R,128D,148V,177C,178T,180D,225S
GU561295	ACTG 5197 PID 541421 time poin	USA	Aug-2006	genomic RNA	plasma	1	231	6L,14P,15L,27I,71D,83L,87Q,96I,110N,116A,120R,128D,148V,177C,178T,180D,225S
GU561296	ACTG 5197 PID 541433 time poin	USA	Apr-2006	genomic RNA	plasma	1	231	6L,14P,27I,83L,86A,87Q,91V,116A,118T,120G,123A,148I
GU561297	ACTG 5197 PID 541433 time poin	USA	Jun-2006	genomic RNA	plasma	1	231	6L,14P,27I,83L,86AV,87Q,91V,116A,118T,120G,123A,148I
GU561298	ACTG 5197 PID 541522 time poin	USA	Jan-2007	genomic RNA	plasma	1	231	6L,83L,154K,178T
GU561299	ACTG 5197 PID 541522 time poin	USA	Feb-2007	genomic RNA	plasma	1	231	6L,83L,154K,178T
GU561121	ACTG 5197 PID 60885 time point	USA	Mar-2006	genomic RNA	plasma	1	231	83L,86A,87Q,96I,116T,187DE,208G
GU561122	ACTG 5197 PID 60885 time point	USA	Jun-2006	genomic RNA	plasma	1	231	83L,86AV,87HQ,96IM,116T,120NS,208AG
GU561123	ACTG 5197 PID 62516 time point	USA	Mar-2006	genomic RNA	plasma	1	231	6L,83L
GU561124	ACTG 5197 PID 62516 time point	USA	May-2006	genomic RNA	plasma	1	231	6L,83L
GU561300	ACTG 5197 PID 630865 time poin	USA	Apr-2006	genomic RNA	plasma	1	231	83L,91V,120H,148A
GU561301	ACTG 5197 PID 630865 time poin	USA	Jul-2006	genomic RNA	plasma	1	231	83L,91V,120H,148A
GU561125	ACTG 5197 PID 72588 time point	USA	Jul-2006	genomic RNA	plasma	1	231	6L,14P,15L,79D,83L,154K,160S
GU561126	ACTG 5197 PID 72588 time point	USA	Oct-2006	genomic RNA	plasma	1	231	6L,14P,15L,79D,83L,154K,160S
GU561127	ACTG 5197 PID 72909 time point	USA	Jan-2006	genomic RNA	plasma	1	231	6L,15L,83M,160S,208G,225S
GU561128	ACTG 5197 PID 72909 time point	USA	Mar-2006	genomic RNA	plasma	1	231	6L,15L,83M,160S,208G,225S
GU561129	ACTG 5197 PID 72911 time point	USA	Jan-2006	genomic RNA	plasma	1	231	83L,136M,194S
GU561130	ACTG 5197 PID 72911 time point	USA	Apr-2006	genomic RNA	plasma	1	231	83L,136M,194S
GU561131	ACTG 5197 PID 72912 time point	USA	Feb-2006	genomic RNA	plasma	1	231	6L,83L
GU561132	ACTG 5197 PID 72912 time point	USA	Apr-2006	genomic RNA	plasma	1	231	6L,83L
GU561133	ACTG 5197 PID 72941 time point	USA	Apr-2006	genomic RNA	plasma	1	231	6L,14P,27I,36I,91V,120H,128D,148V,178T
GU561304	ACTG 5197 PID 72941 time point	USA	Jun-2006	genomic RNA	plasma	1	231	6L,14P,27I,36I,91V,120H,128D,148V,178T
GU561134	ACTG 5197 PID 72962 time point	USA	Jul-2006	genomic RNA	plasma	1	231	6L,83L,120H,148S,154K,225A
GU561135	ACTG 5197 PID 73057 time point	USA	Mar-2007	genomic RNA	plasma	1	231	6L,27I,83L,91A,116A,120S,148V,178T,230I
GU561136	ACTG 5197 PID 73057 time point	USA	May-2007	genomic RNA	plasma	1	231	6L,27I,83L,91A,110N,116A,120S,148V,178T,230I
GU561302	ACTG 5197 PID 781323 time poin	USA	Mar-2007	genomic RNA	plasma	1	231	6M,50G,83L,87Q,96I,116T,120S,154K,178T,180D,208T,210S,225A
GU561303	ACTG 5197 PID 781323 time poin	USA	Jun-2007	genomic RNA	plasma	1	231	6M,50G,83L,87Q,96I,116T,120S,154K,178T,180D,208AT,210S,225A
GU561137	ACTG 5197 PID 83352 time point	USA	Oct-2005	genomic RNA	plasma	1	231	6L,27I,83L,87Q,96V,148V,178T
GU561138	ACTG 5197 PID 83353 time point	USA	Nov-2005	genomic RNA	plasma	1	231	6L,27I,83L,87P,91V,120S,123A,148V,171V,180D
GU561139	ACTG 5197 PID 83353 time point	USA	Jan-2006	genomic RNA	plasma	1	231	6L,27I,83L,87P,91V,120S,123T,148V,171V,180D
GU561140	ACTG 5197 PID 91359 time point	USA	Jul-2006	genomic RNA	plasma	1	231	6L,15L,41T,83L,180D,191I,194S,207Q,208G
GU561141	ACTG 5197 PID 91359 time point	USA	Oct-2006	genomic RNA	plasma	1	231	6L,15L,41T,83L,180D,191IV,194AS,207Q,208G

Genbank References: capsid (p24)

Database

Resources

Team