<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Vetter (2014) Generation of a Recombinant Gag Virus-Like-Particle Panel for the Evaluation of p24 Antigen Detection by Diagnostic HIV Tests PLoS ONE 9 (10), E111552 (2014) 1.78e-166 42 42 Naive Plasma Molecular clones Molecular epidemiology

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AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
KJ689250pBV10Switzerland20-May-2011genomic DNA12316A,11T,12Y,14P,15M,48A,54M,58V,71D,83T,87Q,91F,92L,96L,98D,110N,115V,120S,124V,128D,131R,148V,169F,178T,180D,200S,203R,208G
KJ689251pBV11Switzerland08-Nov-2010genomic DNA12316L,27I,68I,79D,83T,116A,128D,148I,180D
KJ689252pBV12Switzerland05-Nov-2010genomic DNA12316A,14P,15L,28G,31G,33N,54M,58I,92P,128D,148V,150T,178T,200A,207T,208G,225S
KJ689253pBV13Switzerland19-Apr-2011genomic DNA12316A,11T,27I,47C,54M,58I,71D,91A,92P,111I,115V,120S,148V,169F,178T,200S,203R,208G,211S,229K
KJ689254pBV14Switzerland21-Dec-2010genomic DNA12316L,27I,31N,41T,71D,83L,116A,124V,148V,154K,169F,178T,180D,187D,200V,203R,204G,208G,210S
KJ689255pBV15Switzerland21-Nov-2011genomic DNA12316L,83L,148V,153V,180D,230I
KJ689256pBV17Switzerland14-Dec-2010genomic DNA12316A,15M,54M,58I,71D,83T,92P,96I,120S,169F,178T,200S,203R,208G,225S,230I
KJ689257pBV18Switzerland16-Dec-2011genomic DNA12316A,11T,14S,15L,31G,33N,54M,58I,92P,120S,128D,148V,154K,178T,194V,200S,207T,208G,216A,225S
KJ689258pBV19Switzerland03-Oct-2011genomic DNA123114P,15L,41T,71D,83L,91V,116A,120S,128D,148S,154K,169F,178T,187D,194S,203R,208G
KJ689259pBV20Switzerland26-Sep-2008genomic DNA12316A,11I,14S,15L,27I,31G,54S,58V,71D,83L,86A,87Q,91V,96L,107A,111P,115V,116A,120G,123A,128D,139H,148V,154K,169F,178T,183S,200A,203R,207T,208G,210S
KJ689260pBV21Switzerland29-Oct-2008genomic DNA12316L,14S,15L,83L,96L,110N,116A,120H,180D,208G
KJ689261pBV22Switzerland11-Oct-2011genomic DNA12316A,11I,15L,26A,27I,30R,31G,36I,54M,58I,83L,86A,87Q,92Q,96I,111P,116A,120G,128D,129L,148V,154K,169F,171V,177C,178T,183G,187D,200S,203R,207S,208G
KJ689262pBV23Switzerland26-Mar-2004genomic DNA12316A,11I,14T,15L,27I,54M,58I,71D,83L,111P,116A,120G,128D,148V,154K,169F,178T,183G,200S,203R,207A,208G
KJ689263pBV25Switzerland13-Oct-2004genomic DNA123114P,15L,39T,83L,87Q,91V,96I,116T,120H,208G
KJ689264pBV26Switzerland29-Sep-2005genomic DNA12316A,14T,15F,27I,29D,31G,54M,58I,71D,83L,92P,111P,120S,128D,148V,154K,169F,178T,180D,187D,200S,203R,207A,208G,225S
KJ689265pBV27Switzerland07-Mar-2006genomic DNA12316L,15L,27I,41T,71D,91V,116A,120S,128D,148V,154K,169F,178T,183G,203R,208G,210S,225S
KJ689266pBV28Switzerland03-Jun-2006genomic DNA12316A,11I,15V,27I,31G,33N,54V,58I,71D,91N,92P,120S,148V,169F,177G,178T,200S,207T,208G
KJ689267pBV29Switzerland15-May-2007genomic DNA12312V,4R,6L,12Y,14S,36I,71D,83L,87Q,92P,96I,116Q,120S,124V,128D,132Q,136M,148V,169F,178T,183G,187D,188A,203R,208G
KJ689268pBV30Switzerland08-Jul-2011genomic DNA12316A,10P,11M,15L,71D,83T,86Q,87Q,92P,96I,110N,116R,120S,148V,169F,178T,183G,187D,203R,208G,225S
KJ689269pBV31Switzerland08-Jun-2009genomic DNA12316L,14P,27I,41T,71D,83L,86A,87Q,91L,92P,96L,116A,120A,124V,128D,129L,148V,154K,169F,178T,188S,203R,208G
KJ689270pBV32Switzerland11-Jun-2009genomic DNA12316A,11T,14S,15M,27I,54M,58I,71D,92P,120S,135V,154K,169F,178T,190M,200A,203R,225S
KJ689271pBV34Switzerland14-Oct-2008genomic DNA12316L,14P,44A,83L,110N,136M,154K,180D,225S
KJ689272pBV35Switzerland24-Nov-2010genomic DNA123114P,15L,27I,41T,71D,83L,86A,87Q,91V,98D,116A,120S,124V,128D,133R,148V,154K,169F,173G,178T,180D,203R,225S
KJ689273pBV37Switzerland08-Dec-2008genomic DNA12316A,14S,27I,41T,71D,86Q,87Q,91L,92P,96I,116A,148V,154K,169F,178T,180D,187D,203R,204G,207T,208G,225S
KJ689274pBV38Switzerland13-Sep-2007genomic DNA12316P,14S,15L,27I,83L,110S,116A,120S,128D,148V,178T,180D,183Q,225S
KJ689275pBV39Switzerland23-Jun-2009genomic DNA12314S,6A,13N,14P,15L,26A,33N,36I,41M,44P,48I,50Y,52I,58A,59I,64G,66L,68V,71D,72V,78S,79D,83T,86P,87A,88M,91L,92P,96I,100T,111Q,115V,116H,118T,119T_G,120S,122N,128D,131R,132K,135V,136I,141M,143K,148V,194S,200Q,204S,208G,216V,225T,229K,230I
KJ689276pBV42Switzerland27-Oct-2010genomic DNA12316L,15L,71D,83L,92P,94N,96L,116Q,120S,124V,148V,169F,170N,178T,183G,187D,208G,210S
KJ689277pBV43Switzerland23-Mar-2011genomic DNA12316A,10P,11I,14N,15L,27I,54M,58I,83M,87Q,91V,110N,120S,148V,150T,154K,170R,180D,194S,208G,210S,225S
KJ689278pBV46Switzerland18-Dec-2012genomic DNA12316L,14P,15L,31N,41T,59I,71D,87Q,92P,96I,110N,116Q,120G,124V,148V,169F,178T,183G,191I,193S,208G,210S,225S
KJ689279pBV48Switzerland18-Apr-2011genomic DNA12312V,6A,14P,15L,27I,41T,54M,58I,71D,83L,96I,111I,115L,116A,120A,128D,129L,148V,154K,169F,178T,183G,203R,208G,210S,225S
KJ689280pBV51Switzerland03-Apr-2012genomic DNA12313A,4T,6A,10A,14P,15L,26A,33N,36I,41M,48I,50Y,52I,54V,58A,59I,64G,66L,68V,72V,79D,83T,86P,87P,88I,91L,92P,96I,100T,111Q,116H,118I,119S,120R,120R_A,121G,122N,124L,128D,131R,132K,135V,141M,143K,148V,159K,200Q,208G,216V,225T,229K,230I
KJ689281pBV52Switzerland29-Apr-2011genomic DNA12316A,14S,15L,27I,41T,71D,83L,86P,87Q,91L,92P,96I,102G,107A,116T,120S,148V,154K,169F,178T,183S,200N,203R,207A,208G
KJ689282pBV53Switzerland16-May-2012genomic DNA12316A,71D,83I,86P,87Q,92P,96I,116T,120S,148V,169F,178T,183G,187D,203R,208G,225S,230I
KJ689283pBV55Switzerland03-Jan-2012genomic DNA12316L,15L,71D,83L,92P,116Q,120S,124V,148V,169F,171C,178T,183G,210S
KJ689284pBV56Switzerland09-Mar-2012genomic DNA12316A,14P,15L,31G,33N,54M,58I,89W,92P,128D,148V,178T,200S,207A,208G,225S
KJ689285pBV58Switzerland03-Apr-2012genomic DNA12316A,11I,14N,15L,27I,31G,50H,54M,58I,71D,79D,83T,86I,91H,92P,110N,115V,120S,128D,148V,154K,169F,178T,200S,207T,208G,210S,217T
KJ689286pBV59Switzerland03-Apr-2012genomic DNA12313I,6L,14P,15L,16T,27I,31G,33N,71D,83L,87Q,91V,96L,110N,115V,116A,120H,124V,148V,154K,169F,178T,183G,187D,207S,208G,225S,230I
KJ689287pBV60Switzerland16-Apr-2012genomic DNA12316A,10P,11I,14N,15L,27I,54M,58I,83L,87Q,91V,110N,120S,148V,154K,170R,180D,194S,208G,210S,225S
KJ689288pBV61Switzerland18-Apr-2012genomic DNA12316A,14P,44A,50H,54I,71D,83I,86P,87Q,92P,96I,98D,116R,118I,148V,154K,169F,174S,178T,183G,187D,203R,208G,225S,230I
KJ689289pBV63Switzerland27-Aug-2013genomic DNA12314R,6L,27I,83L,86A,96I,112D,116A,128D,148V,177C,178A,180D
KJ689290pBV64Switzerland15-Jul-2013genomic DNA12316A,13N,14P,27I,31N,68I,71D,83L,91A,92P,116A,120G,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,211V,225S
KJ689249pBV8Switzerland11-Apr-2012genomic DNA12316L,15L,16T,27I,41T,71D,83L,91V,116Q,120S,121T,148V,154K,180D,199R,225S,230I

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