<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Pessoa (2014) Deep Sequencing of HIV-1 near Full-Length Proviral Genomes Identifies High Rates of BF1 Recombinants Including Two Novel Circulating Recombinant Forms (CRF) 70_BF1 and a Disseminating 71_BF1 among Blood Donors in Pernambuco, Brazil PLoS ONE 9 (11), E112674 (2014) 6.65e-153 23          

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AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
KJ84975810BR_PE004Brazil2010genomic DNAPBMCsubtype: BF112316M,10I,27I,29K,45D,50S,54A,58I,71D,83T,87Q,92P,93A,96I,97K,106R,110N,116H,120S,148V,156R,169F,171A,173K,178T,183G,187D,203R,208E,211I,213K
KJ84975910BR_PE008Brazil2010genomic DNAPBMCsubtype: BF112316H,14P,41T,50S,71D,83L,92P,116Q,120G,124V,128D,148V,149G,154K,169F,178T,187D,200A,203R,208G
KJ84976010BR_PE009Brazil2010genomic DNAPBMCsubtype: BF112316V,14P,16T,44A,71D,80*W,83L,92P,116Q,120S,124V,148V,154K,169F,178T,183G,187D,208G,225S
KJ84976110BR_PE016Brazil2010genomic DNAPBMCsubtype: BF112316L,11I,27I,41T,71D,116Q,120S,124V,148V,154K,169F,171C,178T,183G,187D,208G,225S
KJ84976210BR_PE025Brazil2010genomic DNAPBMCsubtype: BF1123144A,71D,83L,92P,116Q,120G,124V,148V,154K,169F,178T,183G,187D,208G
KJ84976410BR_PE026_1Brazil2010genomic DNAPBMCsubtype: BF112316A,11M,71D,83M,87Q,92P,116Q,120S,124V,148V,169F,178T,183G,187D,207V,208G
KJ84976510BR_PE032_1Brazil2010genomic DNAPBMCsubtype: BF112316M,27I,71D,87Q,92P,96I,116Q,120S,148V,169F,178T,183G,187D,208G
KJ84976710BR_PE053Brazil2010genomic DNAPBMCsubtype: B12316L,14P,15L,75A,83T,86R,87Q,91V,96I,98D,100T,113Q,116A,120S,128D,171V,180D,225S
KJ84976810BR_PE059Brazil2010genomic DNAPBMCsubtype: BF1123114P,27I,71D,83L,86A,87R,92Q,96L,98D,116Q,120S,124V,128D,169F,178T,207V,208G,225S
KJ84976910BR_PE064Brazil2010genomic DNAPBMCsubtype: BF112316L,59I,71D,83L,87Q,92P,96I,110N,112H,116Q,120S,124V,148V,169F,187D,188S,190M,208G
KJ84977010BR_PE066Brazil2010genomic DNAPBMCsubtype: BF112316IM,71D,79D,83T,92P,116Q,120S,124V,148AITV,154KR,169F,178T,183G,187D,191IV,208G,225S
KJ84977110BR_PE071Brazil2010genomic DNAPBMCsubtype: BF112316M,15L,27I,41T,71D,92P,116Q,120S,124V,148V,169F,178T,183G,187D,191I,207G,208G
KJ84977210BR_PE073Brazil2010genomic DNAPBMCsubtype: BF112316L,11S,27I,71D,92P,96I,116Q,120G,124V,148V,154K,169F,170R,171V,183G,187D,207S,208G,225S,230I
KJ84977310BR_PE084Brazil2010genomic DNAPBMCsubtype: BF1123114T,15L,71D,86M,87Q,92P,96I,116Q,120S,124V,148V,154K,169F,170R,178T,183G,187D,207Q,208G,225S
KJ84977410BR_PE086Brazil2010genomic DNAPBMCsubtype: BF112313I,6L,11A,12Y,14S,27I,71D,75D,83L,87Q,92P,96I,116Q,120S,124V,148V,169F,171A,183G,187D,188S,207T,208G,225S
KJ84977510BR_PE087Brazil2010genomic DNAPBMCsubtype: BF112316M,14P,27I,44A,71D,78V,87Q,92P,96I,116Q,120S,148V,169F,178T,183S,187D,208Q
KJ84977610BR_PE088Brazil2010genomic DNAPBMCsubtype: BF1123115L,71D,83L,92P,116Q,120S,124V,148V,169F,171C,178T,183G,207T,208G
KJ84977710BR_PE090Brazil2010genomic DNAPBMCsubtype: BF112316L,15L,27I,41T,71D,79D,83L,92P,116Q,120S,124V,148V,154K,169F,178T,183G,187D,191I,207T,208G
KJ84977810BR_PE092Brazil2010genomic DNAPBMCsubtype: BF112316L,71D,83T,86M,91L,92P,107S,116Q,120S,124V,128D,169F,178T,187D,208G
KJ84977910BR_PE094Brazil2010genomic DNAPBMCsubtype: BF112316M,14P,27I,44A,71D,78V,87Q,92P,96I,116Q,120S,148V,169F,178T,183S,187D,208Q
KJ84978010BR_PE104Brazil2010genomic DNAPBMCsubtype: B12316L,41T,50G,59I,83L,87Q,91V,120S,148S,203R,208T,209P,216V
KJ84978210BR_PE107Brazil2010genomic DNAPBMCsubtype: F112316L,12Y,14S,15L,83L,87Q,92P,96I,111P,115V,116Q,120S,148V,154K,178T,187D,203R,204G,208G
KJ84978310BR_PE109Brazil2010genomic DNAPBMCsubtype: BF112316L,15L,27I,71D,92P,116Q,120S,124V,154K,169F,178T,187D,208G,225S

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