<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Badreddine (2016) Identification and characterization of HIV type 1 subtypes present in the Kingdom of Saudi Arabia: high level of genetic diversity found AIDS Res. Hum. Retroviruses 23 (5), 667-674 (2007) 9.84e-173 58 58 Mixed Plasma; PBMC Direct PCR Molecular epidemiology

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AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
DQ375284FJ20180Saudi Arabiagenomic RNAplasma12316L,14P,16A,27I,41T,71D,83L,91V,92Q,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
DQ375285J11201Saudi Arabiagenomic RNAplasma12316L,83L,148IV,180D
DQ375286J11203Saudi Arabiagenomic RNAplasma12316A,33N,71D,83T,86Q,87Q,92P,96I,116T,120S,148V,169F,178T,183G,187D,203R,208G,225S
DQ375287J11205Saudi Arabiagenomic RNAplasma12316G,11I,12Y,15L,31S,44A,54V,71D,83I,86A,87Q,91F,92P,96I,116T,120S,148V,169F,178T,183G,187D,203R,208G,210S,225S
DQ375288J11206Saudi Arabiagenomic RNAplasma12316L,27I,83L,87Q,91V,120S,148IV,180D
DQ375289J11209Saudi Arabiagenomic RNAplasma12316A,27I,41T,71D,79D,83T,116A,120S,148V,154K,169F,178T,180D,187D,203R,208G,225S
DQ375290J11214Saudi Arabiagenomic RNAplasma12316L,14H,15M,27I,31G,33N,41T,71D,83L,91N,92P,107V,116A,120S,124V,128D,132K,148V,149C,154K,169F,180D,187D,203R,208G,210S,225S
DQ375291J11215Saudi Arabiagenomic RNAplasma12316L,27I,41T,75D,83I,87Q,91V,98DE,116A,120S,124V,154K,178T,200N,225S
DQ375292J11222Saudi Arabiagenomic RNAplasma12316L,83L,115V,120S,180D,225S,230I
DQ375293J11223Saudi Arabiagenomic RNAplasma12316A,14S,15L,27I,41T,71D,83L,86P,87Q,92P,96I,116T,120S,129L,148V,154K,169F,178T,180D,187D,200N,203R,207S,208G,225S
EU697904J11223Saudi Arabiagenomic RNAplasma12316A,14S,15L,27I,41T,71D,83L,86P,87Q,92P,96I,116T,120S,129L,148V,154K,169F,178T,180D,187D,200N,203R,207S,208G,225S
DQ375294J11226Saudi Arabiagenomic RNAplasma12316A,14S,15IL,27I,71D,83L,86Q,87Q,92P,96I,116T,148V,154K,169F,178T,203R,204G,207ST,208G,210S,225S
DQ375295J11227Saudi Arabiagenomic RNAplasma12316P,11G,12Y,14N,27I,41T,68I,71D,83L,86AV,87Q,88AV,91P,96L,116A,120H,121NT,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S
DQ375296J11228Saudi Arabiagenomic RNAplasma12316A,14AS,27I,41T,54M,58I,71D,83T,87Q,92P,96I,98D,120S,135V,148V,169F,178T,203R,208G,225S
DQ375298J11232Saudi Arabiagenomic RNAplasma12316A,14S,27I,71D,83L,86P,87Q,91L,92P,96I,116A,148V,154K,169F,178T,187D,203R,204G,207A,208G,225S
EU697905J11232Saudi Arabiagenomic RNAplasma12316A,14S,27I,71D,83L,86P,87Q,91M,92P,96I,116A,148V,154K,169F,178T,187D,203R,204G,207A,208G,225S
DQ375299J11233Saudi Arabiagenomic RNAplasma12316A,14P,71D,83I,86A,87Q,92P,96I,116R,120S,148V,169F,178T,183G,187D,203R,208G
EU697906J11233Saudi Arabiagenomic RNAplasma12316A,14P,71D,83I,86A,87Q,92P,96I,116R,120S,148V,169F,178T,183G,187D,203R,208G
DQ375300J11234Saudi Arabiagenomic RNAplasma12316G,14S,15L,27I,41T,71D,83L,86P,87Q,91F,92P,96L,116T,120S,148V,154K,169F,178T,180D,187D,203R,207A,208G,225S
EU697910J11235Saudi Arabiagenomic RNAplasma42136A,15L,27I,41T,71D,83L,86Q,87Q,96I,116A,120NS,148V,154K,169F,178T,180DE,187DE,203R,207A,208G
DQ375301J11237Saudi Arabiagenomic RNAplasma12312V,6A,11I,14N,15L,27I,54M,58I,71D,83L,92P,111P,120S,128D,148V,154K,169F,178T,183G,187D,200S,203R,207A,208G
DQ375302J11238Saudi Arabiagenomic RNAplasma12316A,14S,27I,41T,71D,83L,86Q,87Q,96I,116A,120S,148V,154K,169F,178T,180D,187D,203R,207A,208G,225S
DQ375303J11239Saudi Arabiagenomic RNAplasma12316L,15IL,27I,41T,71D,75DE,83T,91V,116A,120S,124V,148V,154K,169F,177G,178T,180D,187D,203R,208G
DQ375304J11240Saudi Arabiagenomic RNAplasma12316L,14P,27I,41T,71D,83L,120S,128D,148V,154K,169F,178T,187D,188S,203R,208G
DQ375305J11241Saudi Arabiagenomic RNAplasma12316M,41T,83L,148A,208G
DQ375306J11243Saudi Arabiagenomic RNAplasma12316A,14S,15L,27I,41T,71D,83L,86Q,87Q,92P,96I,116T,120A,148V,154K,169F,178T,180D,187D,203R,207A,208G,210S,225S
EU697907J11243Saudi Arabiagenomic RNAplasma12316A,14S,15L,27I,41T,71D,83L,86Q,87Q,92P,96I,116T,120A,148V,154K,169F,178T,180D,187D,203R,207A,208G,210S,225S
DQ375307J11244Saudi Arabiagenomic RNAplasma12316H,14P,27I,41T,71D,83L,86AP,87Q,91IV,96I,116T,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S,230I
DQ375308J11245Saudi Arabiagenomic RNAplasma12316A,11I,12Y,14S,15M,27I,36I,54M,58I,71D,83L,92P,96I,111P,116A,120G,123A,128D,148V,169F,171A,178T,180D,183S,199R,200S,207T,208G
DQ375309J11247Saudi Arabiagenomic RNAplasma12316L,14P,15L,27I,41T,71D,83L,116A,120S,128D,148V,169F,178T,187D,188S,203R,208G
DQ375310J11248Saudi Arabiagenomic RNAplasma12316L,15L,27I,41T,71D,83L,91AV,154K,194S,201L,208G
DQ375311J11254Saudi Arabiagenomic RNAplasma12316A,14S,27I,71D,83L,86Q,87Q,91M,92P,96I,116A,148V,154K,169F,178T,187D,203R,204G,207A,208G,225S
DQ375312J11401Saudi Arabiagenomic RNAplasma12316L,14S,15IL,27I,41T,71D,83T,86ALPV,91V,96V,116A,120S,128D,148V,154K,169F,171V,178T,180D,203R
DQ375313J11405Saudi Arabiagenomic RNAplasma12316L,27I,41T,71D,83L,91V,112A,116A,118I,120G,124V,128D,148V,169F,178T,180D,187D,203R,208G,225S
DQ375314J11407Saudi Arabiagenomic RNAplasma12316A,14S,15L,27I,41T,54M,58I,71D,91M,116A,120S,135V,148V,169F,177C,178T,180D,188S,203R,208G,225S
DQ375315J11426Saudi Arabiagenomic RNAplasma123114P,27I,41T,71D,83L,91V,116T,120S,124V,128D,148V,154KR,169F,178T,180D,187D,203R
DQ375316J11440Saudi Arabiagenomic RNAplasma123114P,15L,27I,41T,71D,83L,116A,124V,148V,154K,169F,178T,180D,187D,203R,208G,210S
DQ375317J11441Saudi Arabiagenomic RNAplasma12316L,15L,27I,36I,41T,71D,83L,87Q,91V,110N,112A,116A,120S,124V,128D,148V,169F,178T,180D,187D,191I,207S,208G,210S,225S
DQ375318J11449Saudi Arabiagenomic DNAblood12316L,27IV,36I,41T,83MV,87HQ,98D,120S,135V,148V,180D
DQ375319J11451Saudi Arabiagenomic RNAplasma12316A,71D,75D,83I,86P,87Q,92P,96I,98D,116R,120S,148V,169F,178T,200N,203R,208G,210S,225S
EU697908J11451Saudi Arabiagenomic RNAplasma12316A,27IV,71D,75D,83I,86P,87Q,92P,96I,98D,116R,120S,148V,169F,178T,191IV,200N,203R,208G,210S,225S
DQ375320J11453Saudi Arabiagenomic RNAplasma12316L,14AS,15L,27I,41T,71D,83L,87Q,91V,112A,116A,120S,124V,128D,136LM,148V,169F,178T,183A,187D,199R,200N,208G,210S,225S
DQ375321J11454Saudi Arabiagenomic RNAplasma12316A,14P,15L,71D,83I,87Q,91V,92P,96I,110N,116R,120S,148V,169F,178T,200N,203R,208G,210S,225S
DQ375322J11455Saudi Arabiagenomic RNAplasma12316L,83L,154K,180D,205M
DQ375323J11456Saudi Arabiagenomic RNAplasma12316A,14P,27I,41T,71D,83L,86Q,87Q,92P,96I,110N,116T,148V,154K,169F,178T,180D,187D,200N,203R,207T,208G,225S
EU697909J11456Saudi Arabiagenomic RNAplasma12316A,14P,27I,41T,71D,83L,86Q,87Q,92P,96I,110N,116T,148V,154K,169F,178T,180D,187D,200N,203R,207T,208G,225S
DQ375324J11457Saudi Arabiagenomic RNAplasma12316L,14P,15L,27I,41T,71D,83L,87HQ,91V,98D,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
DQ375325J11458Saudi Arabiagenomic RNAplasma123114P,27I,41T,71D,78IL,91A,116A,120G,124V,128D,148V,169F,183T,187D,203R,208G,210S
DQ375326J11459Saudi Arabiagenomic RNAplasma12316L,83L,87Q,91V,154K,180D,194S,205M,208G
DQ375327J11460Saudi Arabiagenomic RNAplasma123114S,15L,27I,41T,71D,83IMT,116A,120S,124V,148V,154K,169F,178T,180D,187D,203R,208G,210S
DQ375328J11462Saudi Arabiagenomic RNAplasma12316L,14P,91V,148S,180D,225GS
DQ375329J11463Saudi Arabiagenomic RNAplasma12316L,14S,15L,27I,36I,41T,71D,91V,116A,124V,128D,148V,154K,169F,178T,183NS,187D,203R,208G,210S
DQ375330J11464Saudi Arabiagenomic RNAplasma12316A,10L,11T,15M,54M,58I,71D,83L,92P,115V,120S,125Q,148V,169F,178T,200S,203R,208G
DQ375331J11465Saudi Arabiagenomic RNAplasma12316L,15L,27I,41T,71D,83I,116A,120S,124V,148V,154K,169F,178T,180D,187D,203R,208G,225S
DQ375332J11467Saudi Arabiagenomic RNAplasma12316L,11I,15L,41ST,50G,59I,83L,87Q,91V,120S,148V,178T,225S
DQ375333J11468Saudi Arabiagenomic DNAblood12316L,116A,120S,183G,208G
DQ375334J11469Saudi Arabiagenomic RNAplasma12316A,15V,27I,31G,33N,54M,58I,71D,83IV,87Q,92P,96I,120S,124V,148V,169F,170R,178T,200S,203R,207S,208G,225S
DQ375335K17702Saudi Arabiagenomic RNAplasma12316L,13N,14P,27I,41T,71D,83T,87Q,96I,98D,110S,116T,148V,154K,169F,178T,180D,187D,203R,208G

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