<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Sierra (2016) Identification of 3 phylogenetically related HIV-1 BG intersubtype circulating recombinant forms in Cuba J. Acquir. Immune Defic. Syndr. 45 (2), 151-160 (2 1.09e-153 19          

Download sequences

AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
AY900571CB118Cubagenomic DNABG recombinant form;subtype: CRF23_BG12316A,10P,71D,83L,86Q,87Q,96I,116R,148V,154K,169F,178T,183G,187D,203R,208G,210S
DQ020274CB134Cubagenomic DNAsubtype: CRF20_BG12316A,10P,11I,71D,83IT,86Q,87Q,91V,92P,96I,115V,116R,120S,148V,169F,178T,183G,187D,203R,208G
AY900581CB219Cubagenomic RNAsubtype: CRF24_BG12316A,10P,11I,15L,41A,71D,83L,86Q,87Q,92P,96I,110N,116R,132K,136M,148V,154K,169F,178T,183G,187D,203R,208G
AY900577CB228Cubagenomic RNAsubtype: CRF24_BG12316A,10P,11I,71D,83L,86Q,87Q,92P,96I,116T,148V,154K,169F,178T,183G,187D,203R,208G
AY900580CB340Cubagenomic RNAsubtype: CRF24_BG; group: BG recombinant form12316A,10P,11I,41A,71D,83L,86Q,87Q,92P,96I,116R,132K,136M,148V,154K,169F,178T,183G,187D,203R,208G,210S
AY900572CB347Cubagenomic DNABG recombinant form;subtype: CRF23_BG12316A,10P,11I,71D,83L,86P,87Q,92P,96I,116R,120S,123S,136M,148V,154K,169F,178T,183G,187D,191I,200N,207Q,208G
AY900574CB378Cubagenomic DNAsubtype: CRF24_BG12316A,10P,11I,71D,86P,87Q,92P,96I,116R,120S,148V,154K,169F,178T,183G,187D,191I,203R,208G
AY900573CB418Cubagenomic DNABG recombinant form;subtype: CRF23_BG12316A,10S,71D,83M,86Q,87Q,92P,96I,107S,116R,148V,154K,169F,178T,183G,187D,203R,208G
AY900575CB471Cubagenomic DNABG recombinant form;subtype: CRF24_BG12316A,10P,11M,15L,71D,83L,86P,87Q,92P,96I,110N,116R,120S,148A,154K,169F,178T,183G,187D,203R,208G
AY900579CB570Cubagenomic RNAsubtype: CRF24_BG12316A,10P,11I,15L,71D,83L,86R,87Q,92P,96I,100S,110N,116R,120S,148V,154K,169F,178T,183G,187D,203R,208G,210S
AY900576CB619Cubagenomic DNABG recombinant form;subtype: CRF24_BG12316A,10P,11I,71D,83M,86Q,87Q,92P,96I,116R,120S,148V,154K,169F,178T,183G,187D,191I,203R,208G
AY900578CB621Cubagenomic RNAsubtype: CRF24_BG12316A,10P,11M,15L,71D,83L,86Q,87Q,92P,96I,116R,120S,148V,154K,169F,178T,183G,187D,191I,203R,208G,225S
AY586545Cu103Cubagenomic DNAsubtype: CRF20_BG12316A,10P,11I,71D,83T,86Q,87Q,92P,96I,107A,116T,148V,154K,169F,178T,183G,187D,203R,208G
AY586542Cu19Cubagenomic DNAsubtype: B12316L,15L,45D,83L,154K,199R,225S,230I
AY586543Cu43Cubagenomic DNAsubtype: B12316L,83L,148I,180D
AY586547Cu74Cubagenomic DNAsubtype: G12316A,10P,71D,83L,86P,87Q,92P,96I,148V,154K,169F,178T,183G,187D,200A,203R,208G,225S
AY586548Cu85Cubagenomic DNAsubtype: G12316A,41T,71D,75D,83L,86Q,87Q,92P,96I,116T,148V,169F,180D,183G,187D,203R,208G,210S,225S
AY586549Cu87Cubagenomic DNAsubtype: G12316A,71D,83L,86P,87Q,92P,96I,115V,116T,148V,169F,178T,187D,203R,208G
AY586544R77Cubagenomic DNAsubtype: CRF20_BG12316A,10P,11I,71D,83L,86Q,87Q,92P,96I,115V,116R,120S,148V,154K,169F,178T,183G,187D,203R,208G

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