Genbank References: capsid (p24)

Authors	Title	Citation	E-value	# in Gb	#Pts	ART	Source	Cloning	StudyType
Garcia-Broncano (2020)	Early antiretroviral therapy in neonates with HIV-1 infection restricts viral reservoir size and induces a distinct innate immune profile	Sci Transl Med 11 (520) (2019)	1.4e-159	395	10	ART	PBMC	SGS	Reservoir

Download sequences

Accession	IsolateName	Country	Coll Date	Clone	MolType	Source	Note	FirstAA	LastAA	MutList
MK457782	074-A-102-1-1_w0_18	Botswana	2015/2018		genomic DNA			1	231	6L,14S,15L,27I,41T,71D,86A,87Q,91V,96I,116T,120S,128D,148V,169F,178T,180D,203R,208G
MK457783	074-A-102-1-1_w0_19	Botswana	2015/2018		genomic DNA		premature stop codon	1	231	6L,14S,15L,27I,41T,71D,86A,87Q,91V,96I,116T,120S,128D,148V,169F,178T,180D,203R,208G
MK457955	074-A-103-1-4_w1_191	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,23*,27I,31G,33N,41T,71D,83L,115V,116A,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
MK457956	074-A-103-1-4_w1_192	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,23*,27I,31G,33N,41T,71D,80*,83L,115V,116A,117*,124V,128D,148V,154K,156R,162K,169F,173K,178T,180D,184*,187D,203R,208E,214I
MK457957	074-A-103-1-4_w1_193	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,31G,33N,41T,71D,83L,115V,116A,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
MK457959	074-A-103-1-4_w1_195	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,31G,33N,41T,71D,83L,115V,116A,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
MK457960	074-A-103-1-4_w1_196	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,31G,33N,41T,71D,83L,115V,116A,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
MK457961	074-A-103-1-4_w1_197	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,27I,29K,31E,33N,41T,71D,83L,96I,115V,116A,124V,128N,143K,148V,154K,169F,178T,180D,187D,203R,208G,209T
MK457962	074-A-103-1-4_w1_198	Botswana	2015/2018		genomic DNA			1	231	6L,27I,31G,33N,41T,71D,83L,115V,116A,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
MK457963	074-A-103-1-4_w1_199	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,23*,27I,31G,33N,41T,60R,71D,80*,83L,115V,116A,124V,128D,148V,154K,156R,169F,178T,180D,184*,187D,203R,208G
MK457765	074-A-103-1-4_w12_1	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,27I,31G,33N,41T,71D,80*,83L,115V,116A,117*,124V,128D,137S,148V,154K,169F,178T,180N,184*,187D,203R,206R,208E
MK457964	074-A-103-1-4_w24_200	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,31G,33N,41T,71D,83L,115V,116A,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
MK457773	074-A-103-1-4_w24_9	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,31G,33N,41T,71D,79K,83L,115V,116A,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
MK457774	074-A-103-1-4_w4_10	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,31G,33N,41T,71D,83L,115V,116A,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
MK457775	074-A-103-1-4_w4_11	Botswana	2015/2018		genomic DNA			1	231	6L,27I,31G,33N,41T,71D,83L,115V,116A,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
MK457777	074-A-103-1-4_w4_13	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,31G,33N,41T,71D,83L,115V,116A,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
MK457785	074-A-103-1-4_w4_21	Botswana	2015/2018		genomic DNA		large deletion with hypermut	1	231	6L,23*,27I,31R,33N,41T,60R,71D,76K,80*,83L,89R,97K,115V,116A,117*,124V,127R,128D,148V,154K,156R,162K,169F,178T,180N,184*,187D,203R,206R,208E,220R,229K
MK457786	074-A-103-1-4_w4_22	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,31G,33N,41T,71D,83L,115V,116A,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
MK457787	074-A-103-1-4_w4_23	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,31G,33N,41T,71D,83L,115V,116A,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
MK457788	074-A-103-1-4_w4_24	Botswana	2015/2018		genomic DNA			1	231	6L,27I,31G,33N,41T,71D,83L,115V,116A,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
MK457791	074-A-103-1-4_w4_27	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,31G,33N,41T,71D,83L,115V,116A,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
MK457792	074-A-103-1-4_w4_28	Botswana	2015/2018		genomic DNA		large deletion with hypermut	1	231	6L,23*,27I,29K,31G,33N,41T,60E,71D,80*,83L,89R,115V,116A,124V,128D,133*,148V,154K,169F,178T,180D,187D,203R,208G,220R
MK457793	074-A-103-1-4_w4_29	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,23*,27I,31G,33N,41T,71D,76K,80*,83L,115V,116A,124V,127K,128D,133*,148V,154K,156R,169F,173K,178T,180D,184*,187D,203R,208E,220E,222E,223R
MK457778	074-A-103-1-4_w48_14	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,31G,33N,41T,71D,83L,100K,115V,116A,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
MK457779	074-A-103-1-4_w48_15	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,31G,33N,41T,71D,83L,115V,116A,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
MK457780	074-A-103-1-4_w48_16	Botswana	2015/2018		genomic DNA		large deletion with internal inversion	1	231	6L,27I,31G,33N,41T,71D,83L,115V,116A,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
MK457767	074-A-103-1-4_w72_3	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,31G,33N,41T,71D,83L,115V,116A,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
MK457781	074-A-103-1-4_w84_17	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,31G,33N,41T,71D,83L,100K,115V,116A,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
MK457768	074-A-103-1-4_w84_4	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,23*,27I,31R,33N,41T,60R,71D,75K,80*,83L,97K,100K,101R,115V,116A,117*,124V,128D,129L,132~,133~,134~,137S,148V,154K,156R,167Q,169F,175K,178T,180D,184*,187D,203R,206R,208E,220R,222R
MK457769	074-A-103-1-4_w84_5	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,31G,33N,41T,71D,83L,100K,115V,116A,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
MK457771	074-A-103-1-4_w84_7	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,31G,33N,41T,71D,83L,100K,115V,116A,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
MK457772	074-A-103-1-4_w84_8	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,23*,27I,31R,33N,41T,60R,71D,75K,80*,83L,97K,100K,101R,115V,116A,117*,124V,128D,129L,132~,133~,134~,137S,148V,154K,156R,167Q,169F,175K,178T,180D,184*,187D,203R,206R,208E,220R,222R
MK458116	074-A-104-1-0_w0_352	Botswana	2015/2018		genomic DNA		large deletion with hypermut	1	231	6L,14N,27I,41T,71D,79K,91P,96L,116N,120A,128D,148V,154K,169F,178T,180D,187D,200N,201M,208G,212K,220E,225S
MK458117	074-A-104-1-0_w0_353	Botswana	2015/2018		genomic DNA			1	231	6L,14N,27I,41T,71D,91P,96L,116N,120A,128D,148V,154K,169F,178T,180D,187D,200N,201M,208G,225S
MK458118	074-A-104-1-0_w0_354	Botswana	2015/2018		genomic DNA			1	231	6L,14N,27I,41T,71D,91P,96L,116N,120A,128D,148V,154K,169F,178T,180D,187D,200N,201M,208G,225S
MK458119	074-A-104-1-0_w0_355	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,14N,27I,41T,71D,91P,96L,116N,120A,128D,148V,154K,169F,178T,180D,187D,200N,201M,208G,225S
MK458121	074-A-104-1-0_w0_357	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,14N,27I,41T,71D,91P,96L,116N,120A,128D,148V,154K,169F,178T,180D,187D,200N,201M,208G,225S
MK458122	074-A-104-1-0_w0_358	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,14N,27I,41T,71D,91P,96L,116N,120A,128D,148V,154K,169F,178T,180D,187D,200N,201M,208G,225S
MK458123	074-A-104-1-0_w0_359	Botswana	2015/2018		genomic DNA			1	231	6L,14N,27I,41T,71D,91P,96L,116N,120A,128D,148V,154K,169F,178T,180D,187D,200N,201M,208G,225S
MK458124	074-A-104-1-0_w4_360	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,14N,27I,41T,71D,91P,96L,116N,120A,128D,148V,154K,169F,178T,180D,187D,200N,201M,208G,225S
MK458125	074-A-104-1-0_w4_361	Botswana	2015/2018		genomic DNA		5' defect	1	231	6L,14N,27I,41T,71D,91P,96L,116N,120A,128D,148V,154K,169F,178T,180D,187D,200N,201M,208G,225S
MK458126	074-A-104-1-0_w4_362	Botswana	2015/2018		genomic DNA			1	231	6L,14N,27I,41T,71D,91P,96L,116N,120A,128D,148V,154K,169F,178T,180D,187D,200N,201M,208G,225S
MK458127	074-A-104-1-0_w4_363	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,14N,27I,41T,71D,91P,96L,116N,120A,128D,148V,154K,169F,178T,180D,187D,200N,201M,208G,225S
MK458128	074-A-104-1-0_w48_364	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,14N,23*,27I,41T,71D,80*,91P,96L,116N,120A,128D,137E,148V,154K,169F,178T,180D,187D,200N,201M,206R,208E,225S
MK458129	074-A-104-1-0_w48_365	Botswana	2015/2018		genomic DNA			1	231	6L,14N,27I,41T,71D,91P,96L,116N,120A,128D,148V,154K,169F,178T,180D,187D,200N,201M,208G,225S
MK458130	074-A-104-1-0_w48_366	Botswana	2015/2018		genomic DNA			1	231	6L,14N,27I,41T,71D,91P,96L,116N,120A,128D,148V,154K,169F,178T,180D,187D,200N,201M,208G,225S
MK458132	074-A-104-1-0_w48_368	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,14N,27I,41T,71D,91P,96L,116N,120A,128D,148V,154K,169F,178T,180D,187D,200N,201M,208G,225S
MK458135	074-A-104-1-0_w96_371	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,14N,27I,41T,71D,91P,96L,116N,120A,128D,148V,154K,169F,178T,180D,187D,200N,201M,208G,225S
MK457828	074-A-105-1-3_w0_64	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457829	074-A-105-1-3_w0_65	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457830	074-A-105-1-3_w0_66	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457831	074-A-105-1-3_w0_67	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457832	074-A-105-1-3_w0_68	Botswana	2015/2018		genomic DNA			1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457833	074-A-105-1-3_w0_69	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457835	074-A-105-1-3_w0_71	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457836	074-A-105-1-3_w0_72	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,132K,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457837	074-A-105-1-3_w0_73	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457838	074-A-105-1-3_w0_74	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457839	074-A-105-1-3_w0_75	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457840	074-A-105-1-3_w0_76	Botswana	2015/2018		genomic DNA			1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457841	074-A-105-1-3_w0_77	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457842	074-A-105-1-3_w0_78	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457843	074-A-105-1-3_w0_79	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,8R,10I,23*,27I,36I,41T,71D,80*,82K,83L,97K,100K,116N,117*,120S,127R,128D,133*,137K,148V,154K,156R,162K,167Q,169F,173K,178T,180D,184*,187D,203R,206R,208E,210S,220R,223R,225S
MK457844	074-A-105-1-3_w0_80	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457900	074-A-105-1-3_w24_136	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457902	074-A-105-1-3_w24_138	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457903	074-A-105-1-3_w24_139	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457864	074-A-105-1-3_w4_100	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457867	074-A-105-1-3_w4_103	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457868	074-A-105-1-3_w4_104	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457870	074-A-105-1-3_w4_106	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457872	074-A-105-1-3_w4_108	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457847	074-A-105-1-3_w4_83	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120R,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457848	074-A-105-1-3_w4_84	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457849	074-A-105-1-3_w4_85	Botswana	2015/2018		genomic DNA			1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457850	074-A-105-1-3_w4_86	Botswana	2015/2018		genomic DNA			1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457852	074-A-105-1-3_w4_88	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457853	074-A-105-1-3_w4_89	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457854	074-A-105-1-3_w4_90	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457855	074-A-105-1-3_w4_91	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457856	074-A-105-1-3_w4_92	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457857	074-A-105-1-3_w4_93	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,27I,36I,41T,71D,80*,83L,97K,100K,116N,117*,120S,128D,133*,148V,154K,162K,169F,178T,180D,184*,187D,203R,208E,210S,225S
MK457858	074-A-105-1-3_w4_94	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457859	074-A-105-1-3_w4_95	Botswana	2015/2018		genomic DNA			1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457860	074-A-105-1-3_w4_96	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457861	074-A-105-1-3_w4_97	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457862	074-A-105-1-3_w4_98	Botswana	2015/2018		genomic DNA			1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457863	074-A-105-1-3_w4_99	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457904	074-A-105-1-3_w48_140	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457905	074-A-105-1-3_w48_141	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457906	074-A-105-1-3_w48_142	Botswana	2015/2018		genomic DNA		large deletion	1	221	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,208G_VRYPLTFGWCYKLVPVDPREVEEANKDENNSLLHPMSLHGMEDEHGEVLQWKFDSSLARTHMARVKHPEFYKDC*HRRDFPLGLSTGACPGEWSGRDWEWPALR,210A,211Y,212K,213Q,214L,215L,216F,219T,221S
MK457907	074-A-105-1-3_w48_143	Botswana	2015/2018		genomic DNA		premature stop codon	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457908	074-A-105-1-3_w48_144	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457909	074-A-105-1-3_w48_145	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457910	074-A-105-1-3_w48_146	Botswana	2015/2018		genomic DNA			1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457913	074-A-105-1-3_w48_149	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457914	074-A-105-1-3_w48_150	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,27I,36I,41T,71N,83L,116N,118I,120S,128D,133*,148V,154K,163N,166N,169F,173K,178T,180D,184*,185I,187D,203R,208G,210S,225S,229K
MK457915	074-A-105-1-3_w48_151	Botswana	2015/2018		genomic DNA			1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457917	074-A-105-1-3_w48_153	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457918	074-A-105-1-3_w48_154	Botswana	2015/2018		genomic DNA		large deletion	1	221	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,208G_VRYPLTFGWCYKLVPVDPREVEEANKDENNSLLHPMSLHGMEDEHGEVLQWKFDSSLARTHMARVKHPEFYKDC*HRRDFPLGLSTGACPGEWSGRDWEWPALR,210A,211Y,212K,213Q,214L,215L,216F,219T,221S
MK457920	074-A-105-1-3_w72_156	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457921	074-A-105-1-3_w72_157	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457922	074-A-105-1-3_w72_158	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457923	074-A-105-1-3_w72_159	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457924	074-A-105-1-3_w72_160	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457925	074-A-105-1-3_w72_161	Botswana	2015/2018		genomic DNA			1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457926	074-A-105-1-3_w72_162	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457927	074-A-105-1-3_w72_163	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,27I,36I,41T,71D,80*,83L,96I,116N,117*,120S,127E,128D,132K,133*,137E,143K,148V,152N,154K,159K,169F,178T,180D,187D,201T,203R,208G,210S,225S
MK457928	074-A-105-1-3_w72_164	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457929	074-A-105-1-3_w72_165	Botswana	2015/2018		genomic DNA			1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457930	074-A-105-1-3_w72_166	Botswana	2015/2018		genomic DNA			1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457932	074-A-105-1-3_w72_168	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457933	074-A-105-1-3_w72_169	Botswana	2015/2018		genomic DNA			1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457934	074-A-105-1-3_w72_170	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457935	074-A-105-1-3_w72_171	Botswana	2015/2018		genomic DNA		premature stop codon	1	231	6L,23*,27I,36I,41T,71D,83L,97K,116N,120S,128D,137R,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457936	074-A-105-1-3_w72_172	Botswana	2015/2018		genomic DNA		internal inversion	24	231	24E,25R,26Y,27L,28K,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457937	074-A-105-1-3_w72_173	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457938	074-A-105-1-3_w72_174	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457939	074-A-105-1-3_w72_175	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,76K,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457873	074-A-105-1-3_w8_109	Botswana	2015/2018		genomic DNA			1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457875	074-A-105-1-3_w8_111	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457876	074-A-105-1-3_w8_112	Botswana	2015/2018		genomic DNA			1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457877	074-A-105-1-3_w8_113	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,8R,27I,28K,36I,41T,71D,83L,116N,117*,120S,128D,137R,148V,154K,167Q,169F,178T,180D,184*,187D,203R,208G,210S,225S
MK457878	074-A-105-1-3_w8_114	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457879	074-A-105-1-3_w8_115	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457880	074-A-105-1-3_w8_116	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457881	074-A-105-1-3_w8_117	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457882	074-A-105-1-3_w8_118	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,23*,27I,36I,41T,71D,80*,83L,116N,117*,120S,128D,137R,148V,154K,169F,178T,180D,184*,187D,203R,208G,210S,225S
MK457883	074-A-105-1-3_w8_119	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457884	074-A-105-1-3_w8_120	Botswana	2015/2018		genomic DNA			1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457885	074-A-105-1-3_w8_121	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,27I,28K,36I,41T,71N,80*,81N,82K,83L,96I,116N,118I,120S,128D,132K,133*,148V,154K,162K,163N,166N,169F,175K,178T,180N,184*,187D,203R,206E,208G,210S,213K,214I,222E,223K,225S
MK457886	074-A-105-1-3_w8_122	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457887	074-A-105-1-3_w8_123	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457888	074-A-105-1-3_w8_124	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457889	074-A-105-1-3_w8_125	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457890	074-A-105-1-3_w8_126	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,80*,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457892	074-A-105-1-3_w8_128	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457893	074-A-105-1-3_w8_129	Botswana	2015/2018		genomic DNA		large deletion	1	221	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,208G_VRYPLTFGWCYKLVPVDPREVEEANKDENNSLLHPMSLHGMEDEHGEVLQWKFDSSLARTHMARVKHPEFYKDC*HRRDFPLGLSTGACPGEWSGRDWEWPALR,210A,211Y,212K,213Q,214L,215L,216F,219T,221S
MK457894	074-A-105-1-3_w8_130	Botswana	2015/2018		genomic DNA			1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457895	074-A-105-1-3_w8_131	Botswana	2015/2018		genomic DNA			1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457896	074-A-105-1-3_w8_132	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,92E,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457897	074-A-105-1-3_w8_133	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457898	074-A-105-1-3_w8_134	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK457899	074-A-105-1-3_w8_135	Botswana	2015/2018		genomic DNA			1	231	6L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MK458071	074-A-106-1-6_w0_307	Botswana	2015/2018		genomic DNA			1	231	6L,27I,41T,71D,83L,91A,96I,116A,120G,124V,128D,148V,154K,169F,178T,187D,191I,203R,208G
MK458072	074-A-106-1-6_w0_308	Botswana	2015/2018		genomic DNA			1	231	6L,27I,41T,71D,83L,91A,96I,116A,120G,124V,128D,148V,154K,169F,178T,187D,191I,203R,208G
MK458073	074-A-106-1-6_w0_309	Botswana	2015/2018		genomic DNA			1	231	6L,27I,41T,71D,83L,91A,96I,116A,120G,124V,128D,148V,154K,169F,178T,187D,191I,203R,208G
MK458074	074-A-106-1-6_w0_310	Botswana	2015/2018		genomic DNA			1	231	6L,27I,41T,71D,83L,91A,96I,116A,120G,124V,128D,148V,154K,169F,178T,187D,191I,203R,208G
MK458075	074-A-106-1-6_w0_311	Botswana	2015/2018		genomic DNA			1	231	6L,27I,41T,71D,83L,91A,96I,116A,120G,124V,128D,148V,154K,169F,178T,187D,191I,203R,208G
MK458076	074-A-106-1-6_w0_312	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,41T,71D,83L,91A,96I,116A,120G,124V,128D,148V,154K,169F,178T,187D,191I,203R,208G
MK458077	074-A-106-1-6_w0_313	Botswana	2015/2018		genomic DNA			1	231	6L,27I,41T,71D,83L,91A,96I,116A,120G,124V,128D,148V,154K,169F,178T,187D,191I,203R,208G
MK458078	074-A-106-1-6_w0_314	Botswana	2015/2018		genomic DNA			1	231	6L,27I,41T,71D,83L,91A,96I,116A,120G,124V,128D,148V,154K,169F,178T,187D,191I,203R,208G
MK458079	074-A-106-1-6_w0_315	Botswana	2015/2018		genomic DNA			1	231	6L,27I,41T,71D,83L,91A,96I,116A,120G,124V,128D,148V,154K,169F,178T,187D,191I,203R,208G
MK458080	074-A-106-1-6_w0_316	Botswana	2015/2018		genomic DNA			1	231	6L,27I,41T,71D,83L,91A,96I,116A,120G,124V,128D,148V,154K,169F,178T,187D,191I,203R,208G
MK458081	074-A-106-1-6_w0_317	Botswana	2015/2018		genomic DNA			1	231	6L,27I,41T,71D,83L,91A,96I,116A,120G,124V,128D,148V,154K,169F,178T,187D,191I,203R,208G
MK458082	074-A-106-1-6_w0_318	Botswana	2015/2018		genomic DNA			1	231	6L,27I,41T,71D,83L,91A,96I,116A,120G,124V,128D,148V,154K,169F,178T,187D,191I,203R,208G
MK458083	074-A-106-1-6_w0_319	Botswana	2015/2018		genomic DNA			1	231	6L,27I,41T,71D,83L,91A,96I,116A,120G,124V,128D,148V,154K,169F,178T,187D,191I,203R,208G
MK458084	074-A-106-1-6_w0_320	Botswana	2015/2018		genomic DNA			1	231	6L,27I,41T,71D,83L,91A,96I,116A,120G,124V,128D,148V,154K,169F,178T,187D,191I,203R,208G
MK458085	074-A-106-1-6_w0_321	Botswana	2015/2018		genomic DNA		premature stop codon	1	231	6L,27I,41T,71D,83L,91A,96I,116A,120G,124V,128D,148V,154K,169F,178T,187D,191I,203R,208G
MK458086	074-A-106-1-6_w0_322	Botswana	2015/2018		genomic DNA			1	231	6L,27I,41T,71D,83L,91A,96I,116A,120G,124V,128D,148V,154K,169F,178T,187D,191I,203R,208G
MK458087	074-A-106-1-6_w0_323	Botswana	2015/2018		genomic DNA			1	231	6L,27I,41T,71D,83L,91A,96I,116A,120G,124V,128D,148V,154K,169F,178T,187D,191I,203R,208G
MK458088	074-A-106-1-6_w0_324	Botswana	2015/2018		genomic DNA		premature stop codon	1	231	6L,27I,41T,71D,83L,91A,96I,116A,120G,124V,128D,148V,154K,169F,178T,187D,191I,203R,208G
MK458089	074-A-106-1-6_w0_325	Botswana	2015/2018		genomic DNA			1	231	6L,27I,41T,71D,83L,91A,96I,116A,120G,124V,128D,148V,154K,169F,178T,187D,191I,203R,208G
MK458090	074-A-106-1-6_w0_326	Botswana	2015/2018		genomic DNA			1	231	6L,27I,41T,71D,83L,91A,96I,116A,120G,124V,128D,148V,154K,169F,178T,187D,191I,203R,208G
MK458091	074-A-106-1-6_w0_327	Botswana	2015/2018		genomic DNA			1	231	6L,27I,41T,71D,83L,91A,96I,116A,120G,124V,128D,148V,154K,169F,178T,187D,191I,203R,208G
MK458092	074-A-106-1-6_w0_328	Botswana	2015/2018		genomic DNA			1	231	6L,27I,41T,71D,83L,91A,96I,116A,120G,124V,128D,148V,154K,169F,178T,187D,191I,203R,208G
MK458096	074-A-106-1-6_w0_332	Botswana	2015/2018		genomic DNA			1	231	6L,27I,41T,71D,83L,91A,96I,116A,120G,124V,128D,148V,154K,169F,178T,187D,191I,203R,208G
MK458103	074-A-106-1-6_w12_339	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,23*,26I,27I,41T,61R,71D,80*,83L,91A,96I,116A,120G,124V,128D,137R,142I,148V,154K,156R,162K,169F,178T,184*,187D,191I,203R,206R,208E,220R,222R,225S
MK458104	074-A-106-1-6_w12_340	Botswana	2015/2018		genomic DNA			1	231	6L,27I,41T,71D,83L,91A,96I,116A,120G,124V,128D,148V,154K,169F,178T,187D,191I,203R,208G
MK458094	074-A-106-1-6_w4_330	Botswana	2015/2018		genomic DNA			1	231	6L,27I,41T,71D,83L,91A,96I,116A,120G,124V,128D,148V,154K,169F,178T,187D,191I,203R,208G
MK458095	074-A-106-1-6_w4_331	Botswana	2015/2018		genomic DNA			1	231	6L,27I,41T,71D,83L,91A,96I,116A,120G,124V,128D,148V,154K,169F,178T,187D,191I,203R,208G
MK458097	074-A-106-1-6_w4_333	Botswana	2015/2018		genomic DNA		internal inversion	1	231	6L,27I,41T,71D,83L,91A,96I,116A,120G,124V,128D,137R,148V,154K,169F,178T,187D,188A,191I,203R,206R,208K,213K,220R,222R,223R,225S,229K
MK458098	074-A-106-1-6_w4_334	Botswana	2015/2018		genomic DNA			1	231	6L,27I,41T,71D,83L,91A,96I,116A,120G,124V,128D,148V,154K,169F,178T,187D,191I,203R,208G
MK458099	074-A-106-1-6_w4_335	Botswana	2015/2018		genomic DNA			1	231	6L,27I,41T,71D,83L,91A,96I,116A,120G,124V,128D,148V,154K,169F,178T,187D,191I,203R,208G
MK458100	074-A-106-1-6_w4_336	Botswana	2015/2018		genomic DNA		premature stop codon	1	231	6L,27I,41T,71D,83L,91A,96I,116A,120G,124V,128D,148V,154K,169F,178T,187D,191I,203R,208G
MK458101	074-A-106-1-6_w4_337	Botswana	2015/2018		genomic DNA			1	231	6L,27I,41T,71D,83L,91A,96I,116A,120G,124V,128D,148V,154K,169F,178T,187D,191I,203R,208G
MK458102	074-A-106-1-6_w4_338	Botswana	2015/2018		genomic DNA			1	231	6L,27I,41T,71D,83L,91A,96I,116A,120G,124V,128D,148V,154K,169F,178T,187D,191I,203R,208G
MK458105	074-A-106-1-6_w84_341	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,23*,27I,41T,60E,71D,80*,83L,91A,96I,100K,101R,116A,117*,120G,124V,127R,128D,137E,148V,154K,156R,162K,167Q,169F,178T,184*,187D,191I,203R,208G,222R
MK458106	074-A-107-1-2_w24_342	Botswana	2015/2018		genomic DNA		5' defect	1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK458107	074-A-107-1-2_w24_343	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK458109	074-A-107-1-2_w24_345	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,151R,161V,169F,178T,187D,191I,198R,203R,208G,225S
MK458110	074-A-107-1-2_w24_346	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK458112	074-A-107-1-2_w24_348	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK458113	074-A-107-1-2_w24_349	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,15M,23*,27I,41T,50S,54S,71D,80*,83T,91V,97K,116A,117*,128D,148V,169F,178T,184*,187D,191I,203R,208G,225S,229K
MK458114	074-A-107-1-2_w24_350	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,15M,23*,27I,41T,50S,54S,60E,71D,80*,83T,91V,97K,116A,117*,128D,137R,148V,156R,169F,178T,180K,184*,187D,191I,203R,208E,222R,225S,229K
MK458136	074-A-107-1-2_w24_372	Botswana	2015/2018		genomic DNA			1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK458137	074-A-107-1-2_w24_373	Botswana	2015/2018		genomic DNA			1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK458140	074-A-107-1-2_w24_376	Botswana	2015/2018		genomic DNA			1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK458142	074-A-107-1-2_w24_378	Botswana	2015/2018		genomic DNA			1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK458040	074-A-109-1-1_w0_276	Botswana	2015/2018		genomic DNA			1	231	6L,27I,31G,33N,41T,71D,75D,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
MK458051	074-A-109-1-1_w0_287	Botswana	2015/2018		genomic DNA		premature stop codon	1	231	6L,27I,31G,33N,41T,71D,75D,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
MK458052	074-A-109-1-1_w0_288	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,23*,27I,31G,33N,41T,71D,75D,80*,83L,91V,115V,116A,120S,128D,133*,148V,154K,156R,169F,178T,180D,187D,203R,208G,225S
MK458053	074-A-109-1-1_w0_289	Botswana	2015/2018		genomic DNA			1	231	6L,27I,31G,33N,41T,71D,75D,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
MK458054	074-A-109-1-1_w0_290	Botswana	2015/2018		genomic DNA			1	231	6L,27I,31G,33N,41T,71D,75D,83L,91V,115V,116A,120S,128D,142I,148V,154K,169F,178T,180D,187D,203R,208G,225S
MK458055	074-A-109-1-1_w0_291	Botswana	2015/2018		genomic DNA			1	231	6L,27I,31G,33N,41T,71D,75D,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
MK458056	074-A-109-1-1_w0_292	Botswana	2015/2018		genomic DNA		premature stop codon	1	231	6L,23*,27I,31G,33N,41T,71D,75D,80*,83L,91V,115V,116A,117*,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,220R,225S
MK458066	074-A-109-1-1_w12_302	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,31G,33N,41T,71D,75D,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
MK458067	074-A-109-1-1_w12_303	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,31G,33N,41T,71D,75D,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
MK458068	074-A-109-1-1_w12_304	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,10I,27I,31G,33N,41T,71D,75D,83L,91V,115V,116A,120S,128D,133*,137R,148V,154K,169F,178T,180D,187D,203R,208G,225S
MK458070	074-A-109-1-1_w12_306	Botswana	2015/2018		genomic DNA			1	231	6L,27I,31G,33N,41T,71D,75D,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
MK458048	074-A-109-1-1_w4_284	Botswana	2015/2018		genomic DNA			1	231	6L,27I,31G,33N,41T,71D,75D,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
MK458049	074-A-109-1-1_w4_285	Botswana	2015/2018		genomic DNA		large deletion with internal inversion	1	231	6L,27I,31G,33N,41T,71D,75D,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
MK458050	074-A-109-1-1_w4_286	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,27I,31G,33N,41T,71D,75D,80*,83L,91V,115V,116A,120S,128D,137R,148V,154K,169F,178T,180D,187D,203R,208G,225S
MK458057	074-A-109-1-1_w4_293	Botswana	2015/2018		genomic DNA			1	231	6L,27I,31G,33N,41T,71D,75D,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
MK458058	074-A-109-1-1_w4_294	Botswana	2015/2018		genomic DNA			1	231	6L,27I,31G,33N,41T,71D,75D,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
MK458063	074-A-109-1-1_w4_299	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,23*,27I,31G,33N,41T,71D,75D,80*,83L,91V,115V,116A,120S,128D,148V,154K,156R,169F,178T,180D,184*,187D,203R,208G,225S
MK458064	074-A-109-1-1_w4_300	Botswana	2015/2018		genomic DNA			1	231	6L,27I,31G,33N,41T,71D,75D,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
MK458065	074-A-109-1-1_w4_301	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,27I,28K,31G,33N,41T,46E,71D,75D,82K,83L,91V,115V,116A,120S,128D,132K,148V,154K,163N,169F,178T,180N,184*,187D,203R,208G,214I,223E,225S
MK458061	074-A-109-1-1_w48_297	Botswana	2015/2018		genomic DNA		premature stop codon	1	231	6L,27I,31G,33N,41T,71D,75D,83L,91V,100K,115V,116A,120S,128D,148V,154K,156R,169F,178T,180D,184*,187D,203R,208G,225S
MK458062	074-A-109-1-1_w48_298	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,31G,33N,41T,71D,75D,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
MK458047	074-A-109-1-1_w72_283	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,27I,31G,33N,41T,71D,75D,80*,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
MK458138	074-A-109-1-1_w72_374	Botswana	2015/2018		genomic DNA		large deletion with hypermut	1	231	6L,27I,31G,33N,41T,46E,71D,75D,81N,83L,91V,115V,116A,118I,120S,128D,133*,148V,154K,159K,163N,169F,173K,178T,180D,184*,187D,203R,208G,214I,225S
MK457965	074-A-110-1-4_w0_201	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK457966	074-A-110-1-4_w0_202	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK457968	074-A-110-1-4_w0_204	Botswana	2015/2018		genomic DNA			1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK457969	074-A-110-1-4_w0_205	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK457970	074-A-110-1-4_w0_206	Botswana	2015/2018		genomic DNA			1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK457971	074-A-110-1-4_w0_207	Botswana	2015/2018		genomic DNA			1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK457972	074-A-110-1-4_w0_208	Botswana	2015/2018		genomic DNA			1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK457973	074-A-110-1-4_w0_209	Botswana	2015/2018		genomic DNA		large deletion with hypermut	1	231	6L,15M,23*,27I,41T,50S,51N,54S,71D,80*,82K,83T,91V,97K,100K,101K,116A,117*,127R,128D,133*,137R,148V,156R,169F,178T,184*,187D,191I,203R,206R,208G,225S,229K
MK457974	074-A-110-1-4_w0_210	Botswana	2015/2018		genomic DNA			1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK457975	074-A-110-1-4_w0_211	Botswana	2015/2018		genomic DNA			1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK457976	074-A-110-1-4_w0_212	Botswana	2015/2018		genomic DNA			1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK457977	074-A-110-1-4_w0_213	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,10I,15M,23*,27I,41T,45K,50S,54S,60R,71D,80*,83T,91V,97K,101R,116A,117*,128D,133*,137R,148V,156R,169F,178T,184*,187D,191I,203R,208G,225S,229K
MK457978	074-A-110-1-4_w0_214	Botswana	2015/2018		genomic DNA			1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK457979	074-A-110-1-4_w0_215	Botswana	2015/2018		genomic DNA			1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK457980	074-A-110-1-4_w0_216	Botswana	2015/2018		genomic DNA			1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK457982	074-A-110-1-4_w0_218	Botswana	2015/2018		genomic DNA		premature stop codon	1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK457983	074-A-110-1-4_w0_219	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK457984	074-A-110-1-4_w0_220	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK457985	074-A-110-1-4_w0_221	Botswana	2015/2018		genomic DNA			1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK457986	074-A-110-1-4_w0_222	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,15M,23*,27I,41T,50S,51N,54S,71D,80*,82K,83T,91V,97K,116A,128D,133*,137R,148V,156R,169F,178T,187D,191I,203R,208G,225S,229K
MK457987	074-A-110-1-4_w0_223	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,15M,27I,41T,50S,54S,71D,80*,83T,91V,97K,106R,116A,128D,137R,148V,169F,178T,187D,191I,203R,208G,225S
MK457988	074-A-110-1-4_w0_224	Botswana	2015/2018		genomic DNA			1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK457989	074-A-110-1-4_w0_225	Botswana	2015/2018		genomic DNA			1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK457990	074-A-110-1-4_w0_226	Botswana	2015/2018		genomic DNA		premature stop codon	1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,202F,203R,208G,225S
MK457991	074-A-110-1-4_w0_227	Botswana	2015/2018		genomic DNA			1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK457992	074-A-110-1-4_w0_228	Botswana	2015/2018		genomic DNA			1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK457993	074-A-110-1-4_w0_229	Botswana	2015/2018		genomic DNA			1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK457994	074-A-110-1-4_w0_230	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK457995	074-A-110-1-4_w0_231	Botswana	2015/2018		genomic DNA			1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK457996	074-A-110-1-4_w0_232	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,97K,116A,128D,148V,156R,169F,178T,187D,191I,203R,208G,225S
MK457997	074-A-110-1-4_w0_233	Botswana	2015/2018		genomic DNA		large deletion with internal inversion	1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK457998	074-A-110-1-4_w0_234	Botswana	2015/2018		genomic DNA			1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK457999	074-A-110-1-4_w0_235	Botswana	2015/2018		genomic DNA			1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK458000	074-A-110-1-4_w0_236	Botswana	2015/2018		genomic DNA		premature stop codon	1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK458002	074-A-110-1-4_w0_238	Botswana	2015/2018		genomic DNA			1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK458003	074-A-110-1-4_w0_239	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,117*,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK458004	074-A-110-1-4_w0_240	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,15M,23*,27I,41T,50S,54S,71D,80*,83T,91V,97K,116A,117*,127R,128D,137R,148V,156R,169F,178T,184*,187D,191I,203R,208E,225S,229K
MK458005	074-A-110-1-4_w0_241	Botswana	2015/2018		genomic DNA			1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK458006	074-A-110-1-4_w0_242	Botswana	2015/2018		genomic DNA			1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK458007	074-A-110-1-4_w0_243	Botswana	2015/2018		genomic DNA			1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK458008	074-A-110-1-4_w0_244	Botswana	2015/2018		genomic DNA			1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK458009	074-A-110-1-4_w0_245	Botswana	2015/2018		genomic DNA			1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK458010	074-A-110-1-4_w0_246	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,117*,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK458011	074-A-110-1-4_w0_247	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,15M,23*,27I,41T,50S,54S,71D,80*,82K,83T,91V,97K,101R,116A,128D,133*,137R,148V,162K,169F,178T,184*,187D,191I,203R,208G,225S,229K
MK458012	074-A-110-1-4_w0_248	Botswana	2015/2018		genomic DNA			1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK458013	074-A-110-1-4_w0_249	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,8R,15M,23*,27I,41T,46R,50S,54S,60E,71D,80*,83T,91V,97K,101R,116A,117*,127R,128D,133*,137R,148V,156R,169F,178T,184*,187D,191I,203R,206R,208E,222R,223R,225S,229K
MK458014	074-A-110-1-4_w0_250	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK458018	074-A-110-1-4_w0_254	Botswana	2015/2018		genomic DNA			1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK458019	074-A-110-1-4_w0_255	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK458020	074-A-110-1-4_w0_256	Botswana	2015/2018		genomic DNA			1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK458021	074-A-110-1-4_w0_257	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,8R,15M,23*,27I,41T,50S,54S,71D,76K,80*,83T,91V,101R,116A,117*,128D,143K,148V,156R,162K,169F,178T,187D,191I,203R,208K,222R,225S
MK458022	074-A-110-1-4_w0_258	Botswana	2015/2018		genomic DNA		premature stop codon	1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK458033	074-A-110-1-4_w24_269	Botswana	2015/2018		genomic DNA			1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK458034	074-A-110-1-4_w24_270	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,10I,15M,23*,27I,41T,50S,54S,60R,71D,80*,82K,83T,89R,91V,97K,101K,106R,116A,117*,127R,128D,142I,148V,156R,162K,169F,173K,178T,184*,187D,191I,203R,206R,208E,220E,222R,225S,229K
MK458015	074-A-110-1-4_w4_251	Botswana	2015/2018		genomic DNA			1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK458016	074-A-110-1-4_w4_252	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK458017	074-A-110-1-4_w4_253	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,15M,23*,27I,41T,50S,54S,60E,71D,80*,83T,89E,91V,101R,116A,117*,128D,137R,148V,156R,169F,178T,187D,191I,203R,208K,225S
MK458024	074-A-110-1-4_w4_260	Botswana	2015/2018		genomic DNA			1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK458025	074-A-110-1-4_w4_261	Botswana	2015/2018		genomic DNA			1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK458026	074-A-110-1-4_w4_262	Botswana	2015/2018		genomic DNA		premature stop codon	1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,137R,148V,156R,169F,178T,187D,191I,203R,208G,225S
MK458030	074-A-110-1-4_w4_266	Botswana	2015/2018		genomic DNA		large deletion with internal inversion	1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK458031	074-A-110-1-4_w4_267	Botswana	2015/2018		genomic DNA			1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK458035	074-A-110-1-4_w48_271	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,15M,23*,27I,39I,41T,50S,54S,60K,71D,80*,81N,82K,83T,91V,97K,100K,101R,116A,117*,127R,128D,137R,148V,156R,169F,178T,184*,187D,191I,203R,206R,208K,220R,222R,223R,225S,229K
MK458036	074-A-110-1-4_w48_272	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK458037	074-A-110-1-4_w48_273	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK458028	074-A-110-1-4_w72_264	Botswana	2015/2018		genomic DNA		internal inversion	1	231	6L,21S,27I,41T,71D,83L,86A,87Q,91Y,92P,93A,96I,110N,116T,120G,148V,154K,169F,178T,180D,187D,200L,204G,208G
MK458041	074-A-110-1-4_w84_277	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,15M,23*,27I,41T,50S,54S,71D,80*,83T,91V,97K,116A,117*,128D,133*,137R,143K,148V,156R,169F,178T,184*,187D,191I,203R,208E,220R,225S,229K
MK458042	074-A-110-1-4_w84_278	Botswana	2015/2018		genomic DNA			1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK458043	074-A-110-1-4_w84_279	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,8R,15M,23*,27I,41T,50S,51N,54S,60R,71D,80*,82K,83T,91V,97K,100K,101R,116A,117*,127R,128D,133*,137R,148V,156R,162K,169F,178T,184*,187D,191I,203R,206R,208E,225S,229K
MK458044	074-A-110-1-4_w84_280	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK458045	074-A-110-1-4_w84_281	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,15M,23*,27I,41T,50S,54S,71D,80*,83T,91V,97K,116A,117*,128D,144I,148V,169F,178T,187D,191I,203R,208E,220R,225S,229K
MK458046	074-A-110-1-4_w84_282	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MK458139	074-C-301-1-3_w126_375	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,8R,10I,14P,15L,23*,29K,41T,71D,80*,82K,91P,106R,112A,116A,117*,120G,124V,128D,133*,137K,148V,154K,156R,167Q,169F,178T,180D,184*,187D,200I,203R,204G,208E,223R,225S,229K
MK458148	074-C-301-1-3_w126_384	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,8R,10I,14P,15L,23*,41T,61R,71D,80*,81N,82K,91P,100K,101R,112A,116A,117*,120G,124V,127R,128D,137K,148V,154K,156R,167Q,169F,178T,180D,184*,187D,200I,203R,204R,206R,208K,220R,225S,229K
MK458161	074-C-301-1-3_w126_397	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,14P,15L,23*,41T,71D,80*,82K,91P,100K,112A,116A,117*,120G,124V,128D,137R,148V,154K,169F,178T,180D,184*,187D,200I,203R,204G,208E,225S,229K
MK458218	074-C-301-1-3_w126_454	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,14P,15L,28K,41T,46K,51N,71D,76K,81N,82K,91P,96I,97K,112A,116A,117*,118I,120G,124V,127E,128D,132K,133*,137R,143K,148V,154K,156R,159K,162K,166N,169F,175K,178T,180N,185I,187N,200I,204K,206E,208G,212K,213K,214I,223R,225S
MK458219	074-C-301-1-3_w126_455	Botswana	2015/2018		genomic DNA		large deletion with hypermut	1	231	6L,8R,10I,14P,15L,23*,41T,71D,80*,82K,91P,96I,112A,116A,117*,120S,124V,128D,133*,137R,144I,148V,154K,167Q,169F,178T,180D,184*,187D,200I,203R,204R,208K,225S,229K
MK458220	074-C-301-1-3_w126_456	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,8R,14P,15L,23*,41T,71D,75K,80*,82K,91P,100K,112A,116A,117*,120G,124V,127R,128D,137R,148V,154K,169F,178T,180D,184*,187D,200I,203R,204R,208E,214I,225S,229K
MK458256	074-C-301-1-3_w126_492	Botswana	2015/2018		genomic DNA		large deletion with hypermut	1	231	6L,8R,10I,14P,15L,23*,41T,71D,80*,82K,91P,96I,112A,116A,117*,120S,124V,128D,133*,137R,144I,148V,154K,167Q,169F,178T,180D,184*,187D,200I,203R,204R,208K,225S,229K
MK458257	074-C-301-1-3_w126_493	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,14P,15L,41T,71D,91P,112A,116A,120G,124V,128D,148V,154K,169F,178T,180D,187D,200I,203R,204G,208G,225S
MK458258	074-C-301-1-3_w126_494	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,14P,15L,18K,23*,35K,41T,61E,71N,91P,112A,116A,117*,118I,120G,124V,128D,132K,133*,143K,148V,154K,156E,162K,163N,166N,167Q,169F,173K,175K,178T,180N,184*,187D,197N,200I,204E,206K,208G,212K,214I,215I,220E,223E,225S
MK458172	074-C-309-1-6_w70_408	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,8R,10I,23*,27I,31R,33N,41T,50S,54S,58I,60K,61R,71D,80*,82K,83M,91Y,92P,93A,96I,97K,100K,106R,116A,117*,120S,127R,128D,133*,137R,148V,156R,163N,167Q,169F,171V,175K,178T,180D,184*,187D,203R,206R,210S,225S
MK458235	074-C-309-1-6_w70_471	Botswana	2015/2018		genomic DNA		internal inversion	1	231	6L,27I,31G,33N,41T,50S,54S,58I,71D,83M,91Y,92P,93A,116A,120S,128D,148V,169F,171V,178T,180D,187D,203R,210S,225S
MK458248	074-C-309-1-6_w70_484	Botswana	2015/2018		genomic DNA		large deletion with hypermut	1	231	6L,27I,31E,33N,41T,50S,54S,58I,61E,71D,83M,91Y,92P,93A,116A,120S,128D,148V,163N,166N,167Q,169F,171V,178T,180D,187D,203R,206E,210S,213K,222E,225S
MK458146	074-C-310-1-2_w65_382	Botswana	2015/2018		genomic DNA		large deletion	1	231	3I,6L,41T,50G,59I,71D,83L,91V,111T,116A,120S,128D,135V,148V,154K,163E,169F,177S,187D,207S,208G
MK458151	074-C-310-1-2_w65_387	Botswana	2015/2018		genomic DNA			1	231	3I,6L,41T,50G,59I,71D,83L,91V,111T,116A,120S,128D,135V,148V,154K,163E,169F,177S,187D,207S,208G
MK458152	074-C-310-1-2_w65_388	Botswana	2015/2018		genomic DNA		5' defect	1	231	3T,6L,41T,50G,59I,71D,83L,91V,111T,116A,120S,128D,135V,148V,154K,163E,169F,177S,187D,207S,208G
MK458153	074-C-310-1-2_w65_389	Botswana	2015/2018		genomic DNA			1	231	3I,6L,41T,50G,59I,71D,83L,91V,111T,116A,120S,128D,135V,148V,154K,163E,169F,177S,187D,207S,208G
MK458154	074-C-310-1-2_w65_390	Botswana	2015/2018		genomic DNA			1	231	3T,6L,41T,50G,59I,71D,83L,91V,111T,116A,120S,128D,135V,148V,154K,163E,169F,177S,187D,207S,208G
MK458163	074-C-310-1-2_w65_399	Botswana	2015/2018		genomic DNA		hypermut	1	231	3T,6L,8R,23*,41T,50G,59I,60K,71D,80*,83L,91V,111T,116A,117*,120S,128D,135V,137R,148V,154K,156R,163E,169F,177S,184*,187D,207S,208K,220R,229K
MK458164	074-C-310-1-2_w65_400	Botswana	2015/2018		genomic DNA		large deletion	1	231	3I,6L,41T,50G,59I,71D,83L,91V,111T,116A,120S,128D,135V,148V,154K,163E,169F,177S,187D,207S,208G
MK458166	074-C-310-1-2_w65_402	Botswana	2015/2018		genomic DNA		large deletion with internal inversion	1	231	3T,6L,41T,50G,59I,71D,83L,91V,111T,116A,120S,128D,135V,148V,154K,163E,169F,177S,187D,207S,208G
MK458167	074-C-310-1-2_w65_403	Botswana	2015/2018		genomic DNA		hypermut	1	231	3T,6L,10I,41T,50G,59I,60R,71D,80*,83L,89E,91V,96I,111T,116A,117*,120S,128D,133*,135V,137R,148V,154K,156R,163E,169F,177S,184*,187D,206R,207S,208E,229K
MK458199	074-C-310-1-2_w65_435	Botswana	2015/2018		genomic DNA		hypermut	1	231	3I,6L,8R,23*,41T,50G,59I,71D,80*,82K,83L,91V,111T,116A,117*,120S,128D,133*,135V,137R,148V,154K,156R,163E,167Q,169F,177S,184*,187D,207S,208K,220R,229K
MK458204	074-C-310-1-2_w65_440	Botswana	2015/2018		genomic DNA		large deletion	1	231	3T,6L,41T,50G,59I,71D,83L,91V,111T,116A,120S,128D,135V,148V,154K,163E,169F,177S,187D,207S,208G
MK458207	074-C-310-1-2_w65_443	Botswana	2015/2018		genomic DNA		large deletion with hypermut	1	231	3I,6L,23*,41T,50G,59I,71D,80*,83L,91V,111T,116A,117*,120S,128D,135V,148V,154K,156R,163E,169F,177S,184*,187D,206R,207S,208E,229K
MK458211	074-C-310-1-2_w65_447	Botswana	2015/2018		genomic DNA		hypermut	1	231	3I,6L,23*,41T,46E,50G,59I,60K,71D,80*,83L,91V,96I,100K,101R,111T,116A,120S,127R,128D,133*,135V,137R,148V,154K,156R,163E,169F,177S,184*,187D,206R,207S,208E,212K,220R,222R
MK458212	074-C-310-1-2_w65_448	Botswana	2015/2018		genomic DNA		large deletion	1	231	3I,6L,41T,50G,59I,71D,83L,91V,111T,116A,120S,128D,135V,148V,154K,163E,169F,177S,187D,207S,208G
MK458213	074-C-310-1-2_w65_449	Botswana	2015/2018		genomic DNA		large deletion	1	231	3I,6L,41T,50G,59I,71D,83L,91V,111T,116A,120S,128D,135V,148V,154K,163E,169F,177S,187D,207S,208G
MK458214	074-C-310-1-2_w65_450	Botswana	2015/2018		genomic DNA		large deletion	1	210	3T,6L,41T,50G,59I,71D,83L,91V,111T,116A,120S,128D,135V,148V,154K,163E,169F,177S,187D,207S,208G,210F
MK458215	074-C-310-1-2_w65_451	Botswana	2015/2018		genomic DNA		hypermut	1	231	3I,6L,23*,41T,50G,59I,60R,71D,80*,82K,83L,91V,100K,101R,111T,116A,120S,128D,133*,135V,137R,148V,154K,156R,163E,169F,177S,184*,187D,207S,208E,222R,229K
MK458216	074-C-310-1-2_w65_452	Botswana	2015/2018		genomic DNA		premature stop codon	1	231	3I,6L,41T,50G,59I,71D,83L,91V,111T,116A,120S,128D,135V,148V,154K,163E,169F,177S,187D,207S,208G
MK458217	074-C-310-1-2_w65_453	Botswana	2015/2018		genomic DNA		large deletion	1	231	3I,6L,41T,50G,59I,71D,83L,91V,111T,116A,120S,128D,135V,148V,154K,163E,169F,177S,187D,207S,208G
MK458236	074-C-310-1-2_w65_472	Botswana	2015/2018		genomic DNA		hypermut	1	231	3I,6L,10I,23*,41T,50G,59I,60R,71D,80*,83L,91V,100K,111T,116A,120S,128D,135V,137R,148V,154K,156R,163E,169F,177S,184*,187D,206R,207S,208K,222R
MK458237	074-C-310-1-2_w65_473	Botswana	2015/2018		genomic DNA		large deletion	1	231	3I,6L,41T,50G,59I,71D,83L,91V,111T,116A,120S,128D,135V,148V,154K,163E,169F,177S,187D,207S,208G
MK458239	074-C-310-1-2_w65_475	Botswana	2015/2018		genomic DNA		hypermut	1	231	3T,6L,8R,23*,41T,50G,59I,60K,71D,80*,83L,91V,111T,116A,117*,120S,128D,135V,137R,148V,154K,156R,163E,169F,177S,184*,187D,207S,208K,220R,229K
MK458249	074-C-310-1-2_w65_485	Botswana	2015/2018		genomic DNA		large deletion	1	231	3I,6L,41T,50G,59I,71D,83L,91V,111T,116A,120S,128D,135V,148V,154K,163E,169F,177S,187D,207S,208G
MK458250	074-C-310-1-2_w65_486	Botswana	2015/2018		genomic DNA		large deletion	1	231	3T,6L,41T,50G,59I,71D,83L,91V,111T,116A,120S,128D,135V,148V,154K,163E,169F,177S,187D,207S,208G
MK458259	074-C-310-1-2_w65_495	Botswana	2015/2018		genomic DNA		hypermut	1	231	3I,6L,23*,41T,50R,59I,60R,71D,80*,83L,91V,97K,100K,111T,116A,117*,120S,128D,133*,135V,137R,148V,154K,156R,163E,169F,177S,184*,187D,207S,208E,220R,223R,229K
MK458260	074-C-310-1-2_w65_496	Botswana	2015/2018		genomic DNA		hypermut	1	231	3I,6L,8R,23*,41T,46R,50G,59I,60R,71D,80*,83L,91V,96I,101R,111T,116A,117*,120S,127R,128D,133*,135V,137R,148V,154K,156R,162K,163E,167Q,169F,177S,184*,187D,206R,207S,208E,221I,223R,229K
MK458261	074-C-310-1-2_w65_497	Botswana	2015/2018		genomic DNA		large deletion with hypermut	1	231	3I,6L,41T,50G,59I,71D,76K,80*,83L,91V,111T,116A,118I,120S,128N,135V,143K,148V,154K,163E,166N,169F,177S,180K,187D,207S,208G,212K,214I,215I
MK458262	074-C-310-1-2_w65_498	Botswana	2015/2018		genomic DNA			1	231	3T,6L,41T,50G,59I,71D,83L,91V,111T,116A,120S,128D,135V,148V,154K,163E,169F,177S,187D,207S,208G
MK458173	074-C-311-1-5_w96_409	Botswana	2015/2018		genomic DNA		5' defect	1	231	6L,15L,27I,31G,33N,41T,71D,83L,87Q,91V,116A,128D,148V,154K,169F,178T,180D,187D,203R,208G
MK458175	074-C-311-1-5_w96_411	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,15L,27I,31G,33N,41T,71D,83L,87Q,91V,116A,128D,148V,154K,169F,178T,180D,187D,203R,208G
MK458176	074-C-311-1-5_w96_412	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,15L,27I,31G,33N,41T,71D,83L,87Q,91V,116A,128D,148V,154K,169F,178T,180D,187D,203R,208G
MK458177	074-C-311-1-5_w96_413	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,15L,27I,31G,33N,41T,71D,83L,87Q,91V,116A,128D,148V,154K,169F,178T,180D,187D,203R,208G
MK458182	074-C-311-1-5_w96_418	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,15L,27I,31G,33N,41T,71D,83L,87Q,91V,116A,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
MK458203	074-C-311-1-5_w96_439	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,15L,27I,31G,33N,41T,71D,83L,87Q,91V,116A,128D,148V,154K,169F,178T,180D,187D,203R,208G
MK458229	074-C-311-1-5_w96_465	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,15L,27I,31G,33N,41T,71D,83L,87Q,91V,116A,128D,148V,154K,169F,178T,180D,187D,203R,208G
MK458231	074-C-311-1-5_w96_467	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,15L,23*,27I,31G,33N,41T,60E,71D,83L,87Q,91V,116A,117*,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
MK458233	074-C-311-1-5_w96_469	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,15L,27I,31G,33N,41T,45K,71D,83L,87Q,91V,116A,128D,148V,154K,169F,178T,180D,184*,187D,203R,208G
MK458241	074-C-311-1-5_w96_477	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,15L,27I,31G,33N,41T,71D,83L,87Q,91V,116A,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
MK458242	074-C-311-1-5_w96_478	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,15L,27I,31G,33N,41T,71D,83L,87Q,91V,116A,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
MK458243	074-C-311-1-5_w96_479	Botswana	2015/2018		genomic DNA		large deletion	1	231	3T,6L,41T,50G,59I,71D,83L,91V,111T,116A,120S,128D,135V,148V,154K,163E,169F,177S,187D,207S,208G
MK458251	074-C-311-1-5_w96_487	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,15L,27I,31G,33N,41T,71D,83L,87Q,91V,116A,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
MK458252	074-C-311-1-5_w96_488	Botswana	2015/2018		genomic DNA			1	231	6L,15L,27I,31G,33N,41T,71D,83L,87Q,91V,116A,128D,148V,154K,169F,178T,180D,187D,203R,208G
MK458254	074-C-311-1-5_w96_490	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,15L,27I,31G,33N,41T,71D,83L,87Q,91V,116A,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
MK458264	074-C-311-1-5_w96_500	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,15L,27I,31G,33N,41T,71D,83L,87Q,91V,116A,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
MK458265	074-C-311-1-5_w96_501	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,15L,27I,31G,33N,41T,71D,83L,87Q,91V,116A,128D,148V,154K,169F,178T,180D,187D,203R,208G
MK458170	074-C-312-1-1_w94_406	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,8R,10I,23*,27I,31S,33N,41T,60E,71D,80*,83L,87Q,89R,91V,96L,97K,98D,100K,115V,117*,120S,124V,127R,128D,133*,137R,143K,148V,154K,156R,159K,169F,177C,178T,180D,184*,187D,203R,206R,208G,220R,223R
MK458179	074-C-312-1-1_w94_415	Botswana	2015/2018		genomic DNA		large deletion with hypermut	1	231	6L,23*,27I,31S,33N,41T,46R,71D,80*,83L,87Q,91V,96L,97K,98D,115V,117*,120S,124V,128D,133*,137R,148V,154K,156R,167Q,169F,177C,178T,180D,184*,187D,203R,208R,225S
MK458191	074-C-312-1-1_w94_427	Botswana	2015/2018		genomic DNA			1	231	6L,27I,31G,33N,41T,71D,83L,87Q,91V,96L,98D,115V,120S,124V,128D,148V,154K,169F,177C,178T,180D,187D,203R,208G
MK458244	074-C-312-1-1_w94_480	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,8R,10I,23*,27I,31G,33N,39I,41T,60R,71D,80*,83L,87Q,91V,96L,97K,98D,115V,117*,120S,124V,128D,133*,137E,148V,154K,156R,166N,169F,177C,178T,180D,184*,187D,203R,208E
MK458269	074-C-312-1-1_w94_505	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,31G,33N,41T,71D,83L,87Q,91V,96L,98D,115V,120S,124V,128D,148V,154K,169F,177C,178T,180D,187D,203R,208G
MK458270	074-C-312-1-1_w94_506	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,31G,33N,41T,71D,83L,87Q,91V,96L,98D,115V,120S,124V,128D,148V,154K,169F,177C,178T,180D,187D,203R,208G
MK458271	074-C-312-1-1_w94_507	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,8R,23*,27I,31G,33N,41T,71D,80*,83L,87Q,91V,94S,96L,97K,98D,100K,101R,115V,116R,117*,120S,124V,128D,133*,137R,148V,154K,156R,162K,167Q,169F,177C,178T,180D,184*,187D,203R,206R,208R,220R
MK458272	074-C-312-1-1_w94_508	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,31G,33N,41T,71D,83L,87Q,91V,96L,98D,115V,120S,124V,128D,148V,154K,169F,177C,178T,180D,187D,203R,208G
MK458149	074-C-313-1-4_w89_385	Botswana	2015/2018		genomic DNA		hypermut	1	231	4P,6L,14P,23*,27I,41T,71D,79D,80*,83L,91V,96L,101R,116A,120S,124V,128D,137R,148V,154K,156R,169F,178T,180D,187D,191I,203R,208R,209S,225S
MK458150	074-C-313-1-4_w89_386	Botswana	2015/2018		genomic DNA		hypermut	1	231	4P,6L,14P,23*,27I,41T,71D,79D,80*,83L,91V,96L,116A,117*,120S,124V,128D,133*,137R,143K,148V,154K,156R,167Q,169F,178T,180N,184*,187D,191I,203R,206R,208R,209S,220R,225S
MK458225	074-C-313-1-5_w89_461	Botswana	2015/2018		genomic DNA		hypermut	1	231	4P,6L,8R,10I,14P,23*,27I,41T,60E,71D,79D,80*,83L,91V,96L,100K,116A,117*,120S,124V,127E,128D,133*,137K,143K,148V,154K,156R,169F,178T,180D,184*,187D,191I,203R,206R,208E,209S,220R,225S
MK458226	074-C-313-1-5_w89_462	Botswana	2015/2018		genomic DNA		hypermut	1	231	4P,6L,8R,14P,23*,27I,41T,71D,79D,80*,83L,91V,96L,97K,116A,117*,120S,124V,127R,128D,137R,148V,154K,156R,167Q,169F,178T,180D,184*,187D,191I,203R,206R,208R,209S,220R,222R,225S
MK458234	074-C-314-1-0_w98_470	Botswana	2015/2018		genomic DNA		large deletion	1	231	6H,14P,27I,41T,71D,83L,91V,110N,115V,116A,120S,128D,148V,169F,178T,187D,200H,208G,210S,225S
MK458155	074-C-319-1-1_w74_391	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,31G,33N,71D,86P,87Q,91V,96I,98D,110N,116T,120A,148V,154K,169F,178T,180D,187D,203R,208G,225S
MK458160	074-C-319-1-1_w74_396	Botswana	2015/2018		genomic DNA		large deletion with internal inversion	1	231	6L,31G,33N,71D,86P,87Q,91V,96I,98D,110N,116T,120A,148V,154K,169F,178T,180D,187D,203R,208G,225S
MK458169	074-C-319-1-1_w74_405	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,31G,33N,71D,83I,86P,87Q,91V,96I,98D,116T,120A,148V,154K,169F,178T,180D,187D,203R,208G,225S
MK458180	074-C-319-1-1_w74_416	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,31G,33N,71D,86P,87Q,91V,96I,98D,110N,116T,120A,148V,154K,169F,178T,180D,187D,203R,208G,225S
MK458181	074-C-319-1-1_w74_417	Botswana	2015/2018		genomic DNA			1	231	6L,27I,31G,33N,71D,83I,86P,87Q,91V,96I,98D,116T,120A,148V,154K,169F,178T,180D,187D,203R,208G,225S
MK458183	074-C-319-1-1_w74_419	Botswana	2015/2018		genomic DNA			1	231	6L,31G,33N,71D,83I,86P,87Q,91V,96I,98D,110N,116T,120A,148V,154K,169F,178T,180D,187D,203R,208G,225S
MK458184	074-C-319-1-1_w74_420	Botswana	2015/2018		genomic DNA			1	231	6L,31G,33N,71D,83T,86P,87Q,91V,96I,98D,110N,116T,120A,148V,154K,169F,178T,180D,187D,203R,208G,225S
MK458185	074-C-319-1-1_w74_421	Botswana	2015/2018		genomic DNA			1	231	6L,27I,31G,33N,71D,83I,86P,87Q,91V,96I,98D,116T,120A,148V,154K,169F,178T,180D,187D,203R,208G,225S
MK458186	074-C-319-1-1_w74_422	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,31G,33N,71D,83I,86P,87Q,91V,96I,98D,110N,116T,120A,148V,154K,169F,178T,180D,187D,203R,208G,225S
MK458187	074-C-319-1-1_w74_423	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,31G,33N,71D,83I,86P,87Q,91V,96I,98D,110N,116T,120A,148V,154K,169F,178T,180D,187D,203R,208G,225S
MK458188	074-C-319-1-1_w74_424	Botswana	2015/2018		genomic DNA		large deletion with internal inversion	1	231	6L,31G,33N,71D,86P,87Q,91V,96I,98D,110N,116T,120A,148V,154K,169F,178T,180D,187D,203R,208G,225S
MK458189	074-C-319-1-1_w74_425	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,31G,33N,71D,83I,86P,87Q,91V,96I,98D,110N,116T,120A,148V,154K,169F,178T,180D,187D,203R,208G,225S
MK458245	074-C-319-1-1_w74_481	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,31G,33N,71D,83I,86P,87Q,91V,96I,98D,110N,116T,120A,148V,154K,169F,178T,180D,187D,203R,208G,225S
MK457794	074-P-201-1-4_w0_30	Botswana	2015/2018		genomic DNA			1	231	6L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,225S
MK457795	074-P-201-1-4_w0_31	Botswana	2015/2018		genomic DNA			1	231	6L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,225S
MK457796	074-P-201-1-4_w0_32	Botswana	2015/2018		genomic DNA			1	231	6L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,225S
MK457797	074-P-201-1-4_w0_33	Botswana	2015/2018		genomic DNA			1	231	6L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,225S
MK457798	074-P-201-1-4_w0_34	Botswana	2015/2018		genomic DNA			1	231	6L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,225S
MK457800	074-P-201-1-4_w0_36	Botswana	2015/2018		genomic DNA			1	231	6L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,225S
MK457801	074-P-201-1-4_w0_37	Botswana	2015/2018		genomic DNA			1	231	6L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,225S
MK457802	074-P-201-1-4_w0_38	Botswana	2015/2018		genomic DNA			1	231	6L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,225S
MK457803	074-P-201-1-4_w0_39	Botswana	2015/2018		genomic DNA			1	231	6L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,225S
MK457804	074-P-201-1-4_w0_40	Botswana	2015/2018		genomic DNA			1	231	6L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,225S
MK457808	074-P-201-1-4_w0_44	Botswana	2015/2018		genomic DNA			1	231	6L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,225S
MK457809	074-P-201-1-4_w0_45	Botswana	2015/2018		genomic DNA			1	231	6L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,225S
MK457810	074-P-201-1-4_w0_46	Botswana	2015/2018		genomic DNA			1	231	6L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,225S
MK457811	074-P-201-1-4_w0_47	Botswana	2015/2018		genomic DNA			1	231	6L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,225S
MK457812	074-P-201-1-4_w0_48	Botswana	2015/2018		genomic DNA			1	231	6L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,225S
MK457813	074-P-201-1-4_w0_49	Botswana	2015/2018		genomic DNA			1	231	6L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,225S
MK457814	074-P-201-1-4_w0_50	Botswana	2015/2018		genomic DNA			1	231	6L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,225S
MK457949	074-P-201-1-4_w12_185	Botswana	2015/2018		genomic DNA			1	231	6L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,225S
MK457952	074-P-201-1-4_w12_188	Botswana	2015/2018		genomic DNA		hypermut	1	231	6L,8R,10I,23*,27I,36I,41T,46R,71D,75K,78T,80*,83L,89K,96L,106R,116A,117*,120T,124V,127R,128D,133*,137R,142I,143K,144I,148V,156R,162K,169F,173K,178T,180D,184*,187D,203R,206R,208E,210S,212K,213K,220R,222R,223R,225S,229K
MK457958	074-P-201-1-4_w24_194	Botswana	2015/2018		genomic DNA			1	231	6L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,225S
MK457805	074-P-201-1-4_w4_41	Botswana	2015/2018		genomic DNA		premature stop codon	1	231	6L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,225S
MK457807	074-P-201-1-4_w4_43	Botswana	2015/2018		genomic DNA			1	231	6L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,225S
MK457815	074-P-201-1-4_w4_51	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,225S
MK457816	074-P-201-1-4_w4_52	Botswana	2015/2018		genomic DNA			1	231	6L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,225S
MK457821	074-P-201-1-4_w4_57	Botswana	2015/2018		genomic DNA		large deletion	1	231	6L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,225S
MK457822	074-P-201-1-4_w4_58	Botswana	2015/2018		genomic DNA		premature stop codon	1	231	6L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,225S
MK457823	074-P-201-1-4_w4_59	Botswana	2015/2018		genomic DNA			1	231	6L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,225S
MK457825	074-P-201-1-4_w4_61	Botswana	2015/2018		genomic DNA			1	231	6L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,225S