<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Sutherland (2015) Gag-Protease Sequence Evolution Following Protease Inhibitor Monotherapy Treatment Failure in HIV-1 Viruses Circulating in East Africa AIDS Res. Hum. Retroviruses 31 (10), 1032-1037 (20 2.35e-164 46 23 ART Plasma Direct PCR Miscellaneous

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AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
KT351822Patient1_SARA_failuregenomic RNA12316A,11I,14S,15V,27I,54M,58I,71D,83L,111I,116A,120A,128D,148V,154K,169F,178T,183G,200A,203R,207A,208G,229K
KT351823Patient1_SARA_pre-PIgenomic RNA12316A,11I,14S,15V,27I,48P,54M,58I,71D,83L,111I,116A,120A,128D,148V,154K,169F,178T,183G,184S,200A,203R,207A,208G
KT351803Patient10_SARA_failuregenomic RNA12316AV,11T,12Y,15V,31G,54M,58I,71D,83L,92P,111T,120S,128D,148V,154K,169F,177C,178T,183G,187D,200S,203R,207S,208G,225S
KT351804Patient10_SARA_pre-PIgenomic RNA12316T,11T,12Y,15V,31G,54M,58I,71D,83L,92P,111T,120S,128D,148V,154K,169F,177C,178T,183G,187D,200S,203R,207S,208G,225S
KT351805Patient11_SARA_failuregenomic RNA12316A,14S,15V,27I,44A,58I,71D,83L,86P,87Q,91V,96L,98D,107A,111P,115V,116A,120A,128D,148V,154K,169F,178T,183G,200S,203R,208G,210S
KT351806Patient11_SARA_pre-PIgenomic RNA12316A,14S,15V,27I,44A,58I,71D,83L,86P,87Q,91V,96L,98D,107A,111P,115V,116A,120A,128D,148V,154K,169F,178T,183G,200S,203R,208G,210S
KT351848Patient12_SARA_failuregenomic RNA12316L,14P,17A,27I,41T,71D,83L,87Q,91V,96V,116A,128D,148V,154K,166N,169F,178T,180D,187D,208G,214K,220E,221M,222E,223D,226Q
KT351807Patient12_SARA_pre-PIgenomic RNA12316L,14P,17A,27I,41T,71D,83L,87Q,91V,96V,116A,124V,148V,154K,169F,178T,187D,208G,210S,225S
KT351808Patient13_SARA_failuregenomic RNA12316V,14P,27I,41T,50G,71D,83T,91V,96I,107A,116T,120S,128D,135V,148V,154K,169F,178T,187D,191I,203R,208G,225S
KT351809Patient13_SARA_pre-PIgenomic RNA12316V,14P,27I,41T,50G,71D,83T,91V,96I,107A,116T,120S,128D,135V,148V,154K,169F,178T,187D,191I,203R,208G,225S
KT351810Patient14_SARA_failuregenomic RNA12316H,27I,41T,68I,71D,83L,91V,96I,107S,115M,116A,118I,120S,148V,169F,178T,183G,187D,203R,208G,210S,225S
KT351811Patient14_SARA_pre-PIgenomic RNA12316H,27I,41T,68I,71D,83L,91V,96I,107S,115M,116A,118I,120S,148V,169F,178T,183DGNS,187D,203R,208G,210S,225S
KT351812Patient15_SARA_failuregenomic RNA12316L,27I,41T,71D,83L,91V,116A,120S,124V,128D,148V,169F,171V,178T,180D,187D,203R,208G
KT351813Patient15_SARA_pre-PIgenomic RNA12316L,14S,27I,41T,71D,83L,116A,120S,124V,128D,148V,169F,171V,178T,180D,187D,203R,208G
KT351814Patient16_SARA_failuregenomic RNA12316M,14P,15L,16T,27I,36I,41M,54S,71D,83L,112A,116Q,120S,124V,128D,148V,154K,169F,178T,180D,187D,207S,208G,225S
KT351815Patient16_SARA_pre-PIgenomic RNA123114P,15L,27I,36I,41M,54S,71D,78AS,83L,91V,112A,116A,120S,124V,128D,148V,154K,169F,178T,180D,203R,208G,210S,225S
KT351816Patient17_SARA_failuregenomic RNA12316L,14FS,27I,41T,71D,83L,116A,120S,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
KT351817Patient17_SARA_pre-PIgenomic RNA12316L,14S,27I,41T,71D,83L,116A,120S,124V,128D,148V,154K,169F,170R,178T,180D,187D,191I,203R,208G
KT351818Patient18_SARA_failuregenomic RNA12316L,14S,27I,31G,33N,41T,71D,83L,91V,115V,116A,120S,124V,128D,148V,169F,178T,180D,203R,204G,207Q,208G,210S
KT351819Patient18_SARA_pre-PIgenomic RNA12316L,14S,27I,31G,33N,41T,71D,83L,91V,115V,116A,120S,124V,128D,148V,169F,178T,180D,203R,204G,207Q,208G,210S
KT351820Patient19_SARA_failuregenomic RNA12316L,15L,27I,63H,75D,83L,91V,100T,116A,120S,148V,180D
KT351821Patient19_SARA_pre-PIgenomic RNA12316L,15L,27I,75D,83L,91V,116A,120S,148V,180D,225GS
KT351832Patient2_SARA_failuregenomic RNA12316A,11I,14S,15L,27I,54M,58I,71D,73L,83L,86A,87Q,88P,91V,96I,98DE,111I,115IV,116A,120A,128D,148S,154K,169F,178T,180DE,183H,200AT,203R,207T,208G
KT351833Patient2_SARA_pre-PIgenomic RNA12316A,11I,14S,15L,27I,54M,58I,71D,74T,83L,86AV,87Q,91V,96I,111I,115V,116A,120A,128D,148V,154K,169F,178T,180D,183R,203R,208G
KT351824Patient20_SARA_failuregenomic RNA12316L,27I,41ST,83L,107ST,116A,120S,124V,148V,154K,167*RW,178T,180DE,183HN,225S
KT351825Patient20_SARA_pre-PIgenomic RNA12316L,27I,83L,91IV,107ST,116A,120S,124V,148V,154KR,178ST,180DE,183HKNQ,225S
KT351826Patient21_SARA_failuregenomic RNA12316L,16A,27I,41T,67H,83L,91V,120S,135V,148V,154K
KT351827Patient21_SARA_pre-PIgenomic RNA12316L,16A,27I,41T,67HQ,83L,86IMV,91V,120S,135V,148V,154K,178ST
KT351828Patient22_SARA_failuregenomic RNA12316L,27I,83L,115IV,120NS,148V,167RW,178ST,208G,225S
KT351829Patient22_SARA_pre-PIgenomic RNA12316L,27I,77AT,83L,85PS,91FI,115V,120S,148V,178T,208G,225S
KT351830Patient23_SARA_failuregenomic RNA12316L,15L,27I,41T,50S,54S,83L,87Q,91V,116A,148V,180D,208G,213DE,225S
KT351831Patient23_SARA_pre-PIgenomic RNA12316L,15L,27I,41T,50S,54S,83L,87Q,91V,116A,148V,180D,208G,225S
KT351834Patient3_SARA_failuregenomic RNA12316A,11I,14S,15L,27I,31AG,48I,54M,58I,71D,83L,92P,111P,120S,128D,148V,154K,163E,169F,178T,180D,200S,203R,207PS,208G,225S,229K,230I
KT351835Patient3_SARA_pre-PIgenomic RNA12316A,11AITV,14S,15L,27I,31G,48I,54M,58I,71D,80CW,83L,92P,107S,111A,120S,128D,148V,154K,169F,178T,180D,187A,200S,203R,208G,225S,230I
KT351836Patient4_SARA_failuregenomic RNA12316A,27I,71D,83T,91V,116A,120S,128N,132S,148V,154K,169F,178T,180D,187D,203R,208G,210S
KT351837Patient4_SARA_pre-PIgenomic RNA12316A,27I,71D,83T,91V,116A,120S,128N,132S,148V,154N,169F,178T,180D,187D,203R,208G,210S
KT351838Patient5_SARA_failuregenomic RNA12316A,11I,14N,15L,27I,36I,45D,50Y,58I,71D,83L,91V,92P,111P,120S,128D,148V,154K,163E,169F,178T,187D,191A,200S,203R,208G
KT351839Patient5_SARA_pre-PIgenomic RNA12316A,11I,14N,15L,27I,36I,41T,45D,50H,58I,71D,76Q,92P,107AT,111P,120S,128D,148V,154K,163E,169F,178T,187D,191A,200S,203R,208G,225GS
KT351840Patient6_SARA_failuregenomic RNA12316A,11I,14S,15L,27I,30R,31G,54M,58I,71D,83L,87Q,96I,111I,116A,120S,128D,148V,154K,169F,178T,180D,187A,200S,203R,208G
KT351841Patient6_SARA_pre-PIgenomic RNA12316A,11I,14S,15L,27I,30R,31G,54M,58I,71D,83L,87Q,96I,111I,116A,120NS,128D,148V,154K,169F,178T,180D,187A,200S,203R,208G
KT351842Patient7_SARA_failuregenomic RNA12312V,6A,14S,15L,27I,54M,58I,71D,83L,92P,111P,116A,120S,128D,148V,154K,169F,171C,178T,183G,200S,203R,207T,208G,225S
KT351843Patient7_SARA_pre-PIgenomic RNA12312V,6A,12HY,14PS,15L,27I,54M,58V,71D,74H,76R,83L,92P,107S,111P,116A,120G,123A,128D,148V,154K,169F,170R,171C,178T,200S,207T,208G,225S
KT351844Patient8_SARA_failuregenomic RNA12316A,10W,14S,15L,27I,54M,58I,71D,83I,91V,111P,116A,120G,128D,148V,153V,154K,169F,171I,178T,183G,200S,203R,204G,207A,208G
KT351845Patient8_SARA_pre-PIgenomic RNA12316T,12Y,14S,15V,27I,54M,58I,71D,91V,111P,116A,120S,128D,148V,153V,154K,169F,171I,178T,183G,204G,207T,208G
KT351846Patient9_SARA_failuregenomic RNA12316A,9I,11T,15L,47C,50G,54M,58V,71D,81DN,83L,87Q,91Y,92P,96I,98D,100S,116T,120GR,131R,148V,154KR,169F,171IV,180D,200S,203R,207A,208G
KT351847Patient9_SARA_pre-PIgenomic RNA12316A,9I,11T,15L,47C,50G,54M,58V,71D,83L,87Q,91Y,92P,96I,98D,100S,116T,120R,131R,148V,149IS,154K,169F,171I,180D,200S,203R,207A,208G

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