<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Gaebler (2019) Quadruplex qPCR approach facilitates qualitative and quantitative analysis of the HIV-1 latent reservoir J Exp Med. 2019 Oct 7;216(10):2253-2264 5.01e-156 751 6 ART Plasma; PBMC SGS Reservoir

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AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
MN0902689242_W-2_10A2USA2018genomic DNA9242_W-2_10A2 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,72V,83L,120H,154K,178T
MN0902699242_W-2_10A7USA2018genomic DNA9242_W-2_10A7 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,72V,83L,120H,154K,178T
MN0902709242_W-2_10B4USA2018genomic DNA9242_W-2_10B4 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,72V,83L,120H,154K,178T
MN0902719242_W-2_10C14USA2018genomic DNA9242_W-2_10C14 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,72V,83L,120H,154K,178T
MN0902729242_W-2_10D15USA2018genomic DNA9242_W-2_10D15 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,72V,83L,120H,154K,178T
MN0902739242_W-2_10H11USA2018genomic DNA9242_W-2_10H11 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,8R,23*,72V,80*,83L,89R,96I,97K,101R,117*,120H,127R,133*,154K,156R,167Q,178T,184*,206R
MN0902749242_W-2_10K9USA2018genomic DNA9242_W-2_10K9 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316L,72V,83L,120H,154K,178T
MN0902759242_W-2_10N3USA2018genomic DNA9242_W-2_10N3 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,72V,83L,120H,154K,178T
MN0902769242_W-2_11A21USA2018genomic DNA9242_W-2_11A21 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,72V,83L,120H,154K,178T
MN0902779242_W-2_11B24USA2018genomic DNA9242_W-2_11B24 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,72V,83L,120H,154K,178T
MN0902789242_W-2_11E4USA2018genomic DNA9242_W-2_11E4 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,8R,10I,23*,60S,72V,80*,83L,101R,116R,117*,120H,133*,154K,156R,173K,178T,184*,206R,223R
MN0902799242_W-2_11L23USA2018genomic DNA9242_W-2_11L23 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,72V,83L,120H,154K,178T
MN0902809242_W-2_11M22USA2018genomic DNA9242_W-2_11M22 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,72V,83L,120H,154K,178T
MN0902819242_W-2_11O4USA2018genomic DNA9242_W-2_11O4 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,72V,83L,120H,154K,178T
MN0902829242_W-2_2C6USA2018genomic DNA9242_W-2_2C6 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (intact);subtype: B12316L,72V,83L,120H,154K,178T
MN0902839242_W-2_2D8USA2018genomic DNA9242_W-2_2D8 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,10I,23*,72V,80*,83L,120H,154K,156R,178T,184*,206R
MN0902849242_W-2_2F1USA2018genomic DNA9242_W-2_2F1 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,8R,23*,46R,72V,80*,83L,89R,116R,117*,120H,127R,128K,133*,154K,156R,178T,184*,206R,222R
MN0902859242_W-2_2G5_S13USA2018genomic DNA9242_W-2_2G5_S13 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,23*,72V,80*,83L,89R,116R,117*,120H,133*,154K,156R,178T,184*,222R,223R
MN0902869242_W-2_2H9_S16USA2018genomic DNA9242_W-2_2H9_S16 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,72V,80*,83L,116R,120H,128K,154K,156R,178T,184*
MN0902879242_W-2_2I11USA2018genomic DNA9242_W-2_2I11 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,72V,83L,120H,154K,178T
MN0902889242_W-2_3A2USA2018genomic DNA9242_W-2_3A2 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,72V,83L,117*,120H,154K,178T
MN0902899242_W-2_3D16_S40USA2018genomic DNA9242_W-2_3D16_S40 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,72V,83L,120H,154K,178T
MN0902909242_W-2_3K8_S46USA2018genomic DNA9242_W-2_3K8_S46 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,72V,83L,120H,154K,178T
MN0902919242_W-2_3L1USA2018genomic DNA9242_W-2_3L1 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B52315L,6V,72V,83L,120H,154K,178T
MN0902929242_W-2_3M15_S51USA2018genomic DNA9242_W-2_3M15_S51 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,72V,83L,120H,154K,178T
MN0902939242_W-2_3N20_S53USA2018genomic DNA9242_W-2_3N20_S53 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,72V,83L,120H,154K,178T
MN0902949242_W-2_3P7_S56USA2018genomic DNA9242_W-2_3P7_S56 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,10I,23*,46R,61R,72V,80*,83L,117*,120H,127R,154K,156R,178T,184*
MN0902959242_W-2_4A18_S59USA2018genomic DNA9242_W-2_4A18_S59 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,18K,72V,83L,120H,154K,178T
MN0902979242_W-2_4D1_S65USA2018genomic DNA9242_W-2_4D1_S65 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,72V,83L,120H,154K,178T
MN0902969242_W-2_4D17_S67USA2018genomic DNA9242_W-2_4D17_S67 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,60S,72V,80*,83L,117*,120H,154K,156R,178T,184*
MN0902989242_W-2_4E14_S70USA2018genomic DNA9242_W-2_4E14_S70 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,72V,83L,120H,154K,178T
MN0902999242_W-2_4G19_S76USA2018genomic DNA9242_W-2_4G19_S76 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,72V,83L,120H,154K,178T
MN0903009242_W-2_4G9_S75USA2018genomic DNA9242_W-2_4G9_S75 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,72V,83L,120H,154K,178T
MN0903019242_W-2_4J17_S79USA2018genomic DNA9242_W-2_4J17_S79 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,72V,83L,120H,154K,178T
MN0903029242_W-2_4L19_S82USA2018genomic DNA9242_W-2_4L19_S82 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,8R,10I,23*,60S,72V,80*,83L,101R,116R,117*,120H,133*,154K,156R,173K,178T,184*,206R,223R
MN0903039242_W-2_4O1_S86USA2018genomic DNA9242_W-2_4O1_S86 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,8R,72V,83L,117*,120H,154K,178T,206R
MN0903049242_W-2_5A24_S93USA2018genomic DNA9242_W-2_5A24_S93 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,23*,61R,72V,80*,83L,89R,101R,117*,120H,133*,137R,154K,156R,167Q,178T,184*,206R,220E,222R
MN0903059242_W-2_5C6_S97USA2018genomic DNA9242_W-2_5C6_S97 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,10I,23*,61R,72V,80*,83L,89R,100K,117*,120H,127R,133*,137R,154K,156R,178T,180K,184*,206R
MN0903069242_W-2_5D10_S103USA2018genomic DNA9242_W-2_5D10_S103 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,72V,83L,120H,154K,178T
MN0903079242_W-2_5D2_S101USA2018genomic DNA9242_W-2_5D2_S101 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,8R,10I,23*,47T,60S,61R,72V,80*,83L,89R,100K,116R,117*,120H,127K,128K,143K,154K,156R,167Q,178T,184*,206R,222R
MN0903089242_W-2_5E15_S108USA2018genomic DNA9242_W-2_5E15_S108 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,72V,83L,120H,154K,178T
MN0903099242_W-2_5H17_S113USA2018genomic DNA9242_W-2_5H17_S113 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,72V,83L,120H,154K,178T
MN0903109242_W-2_5I4_S115USA2018genomic DNA9242_W-2_5I4_S115 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,72V,83L,120H,154K,178T
MN0903119242_W-2_5K16_S120USA2018genomic DNA9242_W-2_5K16_S120 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,72V,83L,120H,154K,178T
MN0903149242_W-2_6A5_S131USA2018genomic DNA9242_W-2_6A5_S131 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,72V,80*,83L,116R,120H,128K,154K,156R,178T,184*
MN0903159242_W-2_6J10_S145USA2018genomic DNA9242_W-2_6J10_S145 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,72V,83L,120H,154K,178T
MN0903169242_W-2_6J4_S144USA2018genomic DNA9242_W-2_6J4_S144 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316L,72V,83L,120H,154K,178T
MN0903179242_W-2_6K11_S148USA2018genomic DNA9242_W-2_6K11_S148 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,46R,72V,80*,83L,100K,106R,116R,117*,120H,133*,137R,154K,156R,162K,178T,184*,201M,222E,229K
MN0903189242_W-2_6K4_S146USA2018genomic DNA9242_W-2_6K4_S146 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,10I,23*,61R,72V,80*,83L,89R,100K,117*,120H,127R,133*,137R,154K,156R,178T,180K,184*,206R
MN0903199242_W-2_6L11_S149USA2018genomic DNA9242_W-2_6L11_S149 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B1223112T,18K,28K,72V,83L,120H,154K,178T,187K
MN0903209242_W-2_6M23_S151USA2018genomic DNA9242_W-2_6M23_S151 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,10I,23*,72V,80*,83L,116R,120H,154K,156R,178T,184*,229K
MN0903219242_W-2_6N8_S152USA2018genomic DNA9242_W-2_6N8_S152 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,72V,83L,120H,154K,178T
MN0903229242_W-2_6O14_S155USA2018genomic DNA9242_W-2_6O14_S155 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,72V,83L,120H,154K,178T
MN0903239242_W-2_7A6USA2018genomic DNA9242_W-2_7A6 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,10I,23*,61R,72V,80*,83L,89R,100K,117*,120H,127R,133*,137R,154K,156R,178T,180K,184*,206R
MN0903249242_W-2_7C1USA2018genomic DNA9242_W-2_7C1 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,72V,83L,120H,154K,178T
MN0903259242_W-2_7C18USA2018genomic DNA9242_W-2_7C18 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,72V,83L,120H,154K,178T
MN0903269242_W-2_7M11USA2018genomic DNA9242_W-2_7M11 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,72V,83L,120H,154K,178T
MN0903279242_W-2_7N20USA2018genomic DNA9242_W-2_7N20 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316L,72V,83L,120H,154K,178T
MN0903299242_W-2_7O4USA2018genomic DNA9242_W-2_7O4 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (intact);subtype: B12316L,72V,83L,120H,154K,178T
MN0903309242_W-2_8F20USA2018genomic DNA9242_W-2_8F20 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,72V,83L,120H,154K,178T
MN0903319242_W-2_8G4USA2018genomic DNA9242_W-2_8G4 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,8R,23*,46R,72V,80*,83L,89R,116R,117*,120H,127R,133*,154K,156R,167Q,178T,184*,206R,220R,222K
MN0903329242_W-2_8J5USA2018genomic DNA9242_W-2_8J5 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,72V,83L,120H,154K,178T
MN0903339242_W-2_8K3USA2018genomic DNA9242_W-2_8K3 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,72V,83L,120H,154K,178T
MN0903349242_W-2_9C15USA2018genomic DNA9242_W-2_9C15 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,72V,83L,120H,154K,178T
MN0903359242_W-2_9J15USA2018genomic DNA9242_W-2_9J15 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B3023130M,32Y,35V,36A,37A,39R,40L,40L_C,42C,43A,44L,45Q,46Q,72V,83L,120H,154K,178T
MN0903369242_W-2_9K5USA2018genomic DNA9242_W-2_9K5 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316L,72V,83L,120H,154K,178T
MN0903379242_W-2_9L15USA2018genomic DNA9242_W-2_9L15 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,72V,83L,120H,154K,178T
MN0903389242_W-2_9L6USA2018genomic DNA9242_W-2_9L6 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (intact);subtype: B12316L,72V,83L,120H,154K,178T
MN0901879242_W12_10B2USA2018genomic DNA9242_W12_10B2 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,72V,83L,120H,154K,178T
MN0901889242_W12_10C2USA2018genomic DNA9242_W12_10C2 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,72V,83L,120H,154K,178T
MN0901899242_W12_10D4USA2018genomic DNA9242_W12_10D4 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,72V,83L,120H,154K,178T
MN0901909242_W12_10H2USA2018genomic DNA9242_W12_10H2 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,72V,83L,120H,154K,178T
MN0901919242_W12_10I24USA2018genomic DNA9242_W12_10I24 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,72V,83L,120H,141R,144R,150S,154K,178T
MN0901929242_W12_10P9USA2018genomic DNA9242_W12_10P9 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,72V,83L,120H,154K,178T
MN0901939242_W12_11F5USA2018genomic DNA9242_W12_11F5 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,72V,83L,120H,154K,178T
MN0901949242_W12_11H16USA2018genomic DNA9242_W12_11H16 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,72V,83L,120H,154K,178T
MN0901959242_W12_11J1USA2018genomic DNA9242_W12_11J1 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316L,72V,83L,120H,154K,178T
MN0901969242_W12_11N13USA2018genomic DNA9242_W12_11N13 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,61R,72V,80*,83L,89R,117*,120H,154K,156R,178T,206R
MN0901979242_W12_2A17_S157USA2018genomic DNA9242_W12_2A17_S157 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,72V,83L,120H,154K,178T
MN0901989242_W12_2B23_S161USA2018genomic DNA9242_W12_2B23_S161 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,23*,50H,72V,80*,83L,116R,120H,154K,178T
MN0901999242_W12_2B3_S159USA2018genomic DNA9242_W12_2B3_S159 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,23*,46R,72V,80*,83L,120H,133*,137R,154K,156R,178T,184*
MN0902009242_W12_2B7_S160USA2018genomic DNA9242_W12_2B7_S160 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,72V,83L,120H,154K,178T
MN0902019242_W12_2C4_S162USA2018genomic DNA9242_W12_2C4_S162 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,23*,72V,75K,80*,83L,89R,106R,116R,120H,154K,167Q,175K,178T,184*,206R
MN0902029242_W12_2D17_S170USA2018genomic DNA9242_W12_2D17_S170 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,8R,10I,61R,72V,80*,83L,106R,116R,117*,120H,154K,156R,178T,184*,206R,222R
MN0902039242_W12_2D7_S169USA2018genomic DNA9242_W12_2D7_S169 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,72V,83L,120H,154K,178T
MN0902049242_W12_2G15_S178USA2018genomic DNA9242_W12_2G15_S178 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,8R,10I,23*,60S,72V,80*,83L,101R,116R,117*,120H,133*,154K,156R,173K,178T,184*,206R,223R
MN0902059242_W12_2H21_S182USA2018genomic DNA9242_W12_2H21_S182 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316L,72V,83L,120H,154K,178T
MN0902069242_W12_2J6_S183USA2018genomic DNA9242_W12_2J6_S183 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,72V,83L,120H,154K,178T
MN0902079242_W12_2K2_S186USA2018genomic DNA9242_W12_2K2_S186 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316L,72V,83L,120H,154K,178T
MN0902089242_W12_2L11_S190USA2018genomic DNA9242_W12_2L11_S190 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,23*,61R,72V,80*,83L,89R,96I,101E,116R,117*,120H,133*,154K,156R,178T,184*,220R
MN0902099242_W12_2O6_S195USA2018genomic DNA9242_W12_2O6_S195 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,72V,83L,120H,154K,178T
MN0902109242_W12_2P4_S199USA2018genomic DNA9242_W12_2P4_S199 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,72V,80*,83L,117*,120H,133*,154K,156R,167Q,173K,178T
MN0902119242_W12_3A11_S204USA2018genomic DNA9242_W12_3A11_S204 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,72V,80*,83L,120H,154K,178T,184*,206R
MN0902129242_W12_3C5_S210USA2018genomic DNA9242_W12_3C5_S210 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,10I,23*,72V,80*,83L,100K,117*,120H,133*,137R,154K,156R,178T,184*,206R,222R
MN0902139242_W12_3I19_S220USA2018genomic DNA9242_W12_3I19_S220 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,72V,83L,120H,154K,178T
MN0902149242_W12_3I21USA2018genomic DNA9242_W12_3I21 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,23*,24I,60S,72V,80*,83L,89E,100K,101R,106R,116R,117*,120H,127E,133*,154K,178T,184*,206R,222E
MN0902159242_W12_3J11_S224USA2018genomic DNA9242_W12_3J11_S224 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,29K,72V,83L,120H,154K,178T
MN0902169242_W12_3K11_S227USA2018genomic DNA9242_W12_3K11_S227 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,23*,72V,80*,83L,117*,120H,127R,137R,154K,156R,178T,184*,214I,222E
MN0902179242_W12_3L15_S229USA2018genomic DNA9242_W12_3L15_S229 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,72V,83L,120H,154K,178T
MN0902189242_W12_3O20_S234USA2018genomic DNA9242_W12_3O20_S234 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,72V,83L,120H,154K,178T
MN0902199242_W12_3P10_S235USA2018genomic DNA9242_W12_3P10_S235 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,8R,23*,72V,80*,83L,117*,120H,133*,154K,156R,167Q,178T,184*,220E,222R
MN0902209242_W12_4A22_S239USA2018genomic DNA9242_W12_4A22_S239 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,23*,72V,83L,120H,133*,137R,154K,178T,184*,222R,229K
MN0902219242_W12_4B24USA2018genomic DNA9242_W12_4B24 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,72V,83L,120H,154K,178T
MN0902229242_W12_4E12_S249USA2018genomic DNA9242_W12_4E12_S249 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,72V,83L,120H,154K,178T
MN0902239242_W12_4E19_S250USA2018genomic DNA9242_W12_4E19_S250 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,10I,60S,72V,80*,83L,120H,154K,156R,178T,184*,222R
MN0902249242_W12_4G22_S252USA2018genomic DNA9242_W12_4G22_S252 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316L,72V,83L,120H,154K,178T
MN0902259242_W12_4I18_S255USA2018genomic DNA9242_W12_4I18_S255 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,72V,83L,120H,154K,178T
MN0902269242_W12_4I20_S256USA2018genomic DNA9242_W12_4I20_S256 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,8R,10I,46R,72V,80*,83L,117*,120H,133*,154K,156R,175K,178T,184*,229K
MN0902279242_W12_4O8_S267USA2018genomic DNA9242_W12_4O8_S267 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,72V,83L,120H,154K,178T
MN0902289242_W12_4P8_S271USA2018genomic DNA9242_W12_4P8_S271 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,23*,72V,80*,83L,96I,117*,120H,154K,156R,178T,222E
MN0902299242_W12_5A4_S274USA2018genomic DNA9242_W12_5A4_S274 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,72V,83L,120H,154K,178T
MN0902309242_W12_5F4_S286USA2018genomic DNA9242_W12_5F4_S286 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,23*,60S,72V,80*,83L,89R,116R,120H,127E,154K,156R,167Q,178T,184*,222E
MN0902319242_W12_5J24_S294USA2018genomic DNA9242_W12_5J24_S294 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,72V,83L,120H,154K,178T
MN0902329242_W12_5J8_S293USA2018genomic DNA9242_W12_5J8_S293 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,23*,39I,72V,80*,83L,89R,96I,117*,120H,127E,133*,154K,156R,167Q,178T,184*,206R,220E,222R,229K
MN0902339242_W12_5M21_S298USA2018genomic DNA9242_W12_5M21_S298 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,72V,83L,120H,154K,178T
MN0902349242_W12_5N1_S299USA2018genomic DNA9242_W12_5N1_S299 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,72V,83L,120H,154K,178T
MN0902359242_W12_6A9_S303USA2018genomic DNA9242_W12_6A9_S303 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,10I,23*,46R,60S,61R,72V,80*,83L,89R,106R,116R,117*,120H,128K,133*,154K,156K,167Q,178T,184*,206R,220R,222R
MN0902369242_W12_6F24_S316USA2018genomic DNA9242_W12_6F24_S316 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,10I,23*,29K,60S,61R,72V,80*,83L,100K,101R,116R,117*,120H,127R,133*,154K,156R,178T,184*,206R,215I,220K,229K
MN0902379242_W12_6J10_S318USA2018genomic DNA9242_W12_6J10_S318 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,8R,23*,72V,80*,83L,89R,97K,101R,102N,117*,120H,133*,154K,156R,178T,184*,206R,222R
MN0902389242_W12_6K2_S320USA2018genomic DNA9242_W12_6K2_S320 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,72V,83L,120H,154K,178T
MN0902399242_W12_6K8_S322USA2018genomic DNA9242_W12_6K8_S322 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,10I,23*,72V,80*,83L,100K,117*,120H,133*,137R,154K,156R,178T,184*,206R,222R
MN0902409242_W12_6L24_S323USA2018genomic DNA9242_W12_6L24_S323 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,8R,51N,72V,81N,83L,98K,101E,117*,120H,133*,137E,143K,154K,159K,173K,178T,184*,206E,213K,214I,229K
MN0902419242_W12_6M3_S324USA2018genomic DNA9242_W12_6M3_S324 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,72V,83L,120H,154K,178T
MN0902429242_W12_6O17_S334USA2018genomic DNA9242_W12_6O17_S334 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,72V,83L,120H,154K,178T
MN0902439242_W12_7B19USA2018genomic DNA9242_W12_7B19 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,72V,83L,120H,154K,178T
MN0902449242_W12_7F8USA2018genomic DNA9242_W12_7F8 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,23*,72V,80*,83L,120H,137R,154K,178T,184*,206R,208T
MN0902459242_W12_7G19USA2018genomic DNA9242_W12_7G19 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,72V,83L,120H,154K,178T
MN0902469242_W12_7K17USA2018genomic DNA9242_W12_7K17 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,72V,83L,120H,154K,178T
MN0902479242_W12_7K23USA2018genomic DNA9242_W12_7K23 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,72V,83L,120H,154K,178T
MN0902489242_W12_7N15USA2018genomic DNA9242_W12_7N15 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,72V,83L,120H,154K,178T
MN0902499242_W12_7O20USA2018genomic DNA9242_W12_7O20 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,8R,23*,46R,72V,80*,83L,120H,154K,156R,178T,184*,206R,223R
MN0902509242_W12_7P5USA2018genomic DNA9242_W12_7P5 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,8R,23*,72V,80*,83L,117*,120H,127R,154K,156R,162K,167Q,178T,184*,206R
MN0902519242_W12_8D9USA2018genomic DNA9242_W12_8D9 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,23*,28K,72V,80*,83L,113K,116R,120H,127R,128K,137R,154K,156R,178T,184*,206R,222R
MN0902529242_W12_8E21USA2018genomic DNA9242_W12_8E21 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,72V,83L,120H,154K,178T
MN0902539242_W12_8F1USA2018genomic DNA9242_W12_8F1 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,10I,23*,61R,72V,80*,83L,116R,117*,120H,133*,137R,154K,156R,167Q,178T,184*,206R
MN0902549242_W12_8F10USA2018genomic DNA9242_W12_8F10 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,72V,83L,120H,154K,178T
MN0902559242_W12_8G6USA2018genomic DNA9242_W12_8G6 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,72V,83L,120H,154K,178T
MN0902569242_W12_8H7USA2018genomic DNA9242_W12_8H7 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (intact);subtype: B12316L,72V,83L,120H,154K,178T
MN0902579242_W12_8K6USA2018genomic DNA9242_W12_8K6 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (intact);subtype: B12316L,72V,83L,120H,154K,178T,200I
MN0902589242_W12_8L23USA2018genomic DNA9242_W12_8L23 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,23*,72V,80*,83L,89R,117*,120H,154K,156R,175K,178T,184*,198Y,206R,222E
MN0902599242_W12_8O4USA2018genomic DNA9242_W12_8O4 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,10I,23*,61R,72V,80*,83L,89R,100K,117*,120H,127R,133*,137R,154K,156R,178T,180K,184*,206R
MN0902609242_W12_9B24USA2018genomic DNA9242_W12_9B24 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,23*,60S,72V,80*,83L,120H,133*,137R,154K,156R,178T,184*,206R,222R
MN0902619242_W12_9F20USA2018genomic DNA9242_W12_9F20 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,72V,83L,120H,154K,178T
MN0902629242_W12_9F3USA2018genomic DNA9242_W12_9F3 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (intact);subtype: B12316L,72V,83L,120H,154K,178T
MN0902639242_W12_9H21USA2018genomic DNA9242_W12_9H21 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,18K,31T,72V,83L,120H,133*,154K,178T,187K
MN0902649242_W12_9I21USA2018genomic DNA9242_W12_9I21 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,72V,83L,120H,154K,178T
MN0902659242_W12_9J23USA2018genomic DNA9242_W12_9J23 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,72V,83L,120H,154K,178T
MN0902669242_W12_9K23USA2018genomic DNA9242_W12_9K23 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,72V,83L,120H,154K,178T
MN0902679242_W12_9N1USA2018genomic DNA9242_W12_9N1 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,8R,23*,46E,71K,72V,80*,83L,89R,96I,100K,116R,117*,120H,133*,137R,154K,156R,162K,167Q,178T,184*,206R,220R,221M,222R,223R
MN0903519243_W-2_2E7_S2USA2018genomic DNA9243_W-2_2E7_S2 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,14P,27I,75D,83L,120H,121T,148V,180D
MN0903529243_W-2_2L7_S14USA2018genomic DNA9243_W-2_2L7_S14 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,14P,27I,75D,83L,120H,128D,148V,180D
MN0903539243_W-2_3J13_S25USA2018genomic DNA9243_W-2_3J13_S25 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,14P,27I,75D,83L,148V,180D
MN0903549243_W-2_3L21_S27USA2018genomic DNA9243_W-2_3L21_S27 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316L,14P,27I,75D,83L,148V,180D
MN0903559243_W-2_4B20_S176USA2018genomic DNA9243_W-2_4B20_S176 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,14P,27I,75D,83L,148V,180D
MN0903569243_W-2_4C10_S177USA2018genomic DNA9243_W-2_4C10_S177 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,14P,27I,75D,83L,120H,121T,148V,180D
MN0903579243_W-2_4E5_S34USA2018genomic DNA9243_W-2_4E5_S34 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,14P,27I,75D,83L,120H,148V,180D
MN0903589243_W-2_4G20_S39USA2018genomic DNA9243_W-2_4G20_S39 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,14P,27I,75D,83L,120H,148V,180D
MN0903599243_W-2_4H4_S184USA2018genomic DNA9243_W-2_4H4_S184 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,14P,27I,75D,83L,120H,128D,148V,180D
MN0903609243_W-2_5A10_S58USA2018genomic DNA9243_W-2_5A10_S58 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,14P,23*,26I,27I,75D,80*,83L,97K,116R,117*,120H,121T,132K,133*,137R,143K,148V,162K,167Q,173K,180D,184*,222R
MN0903619243_W-2_5N22_S79USA2018genomic DNA9243_W-2_5N22_S79 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316L,14P,15L,27I,75A,83L,120H,128D,148V,180D
MN0903629243_W-2_5O6_S80USA2018genomic DNA9243_W-2_5O6_S80 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,14P,27I,75D,83L,120H,128D,148V,180D
MN0903639243_W-2_6C15_S83USA2018genomic DNA9243_W-2_6C15_S83 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,14P,15L,23*,27I,75D,80*,83L,97K,100K,117*,137R,148V,156R,162K,180D,184*
MN0903649243_W-2_7F10USA2018genomic DNA9243_W-2_7F10 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,14P,27I,75D,83L,120H,128D,148V,180D
MN0903659243_W-2_8M4USA2018genomic DNA9243_W-2_8M4 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (intact);subtype: B12316L,14P,27I,75D,83L,148V,180D
MN0903669243_W-2_9A12USA2018genomic DNA9243_W-2_9A12 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,14P,27I,71K,75D,83L,120H,148V,180D
MN0903679243_W-2_9M19USA2018genomic DNA9243_W-2_9M19 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,14P,27I,75D,83L,148V,180D
MN0903399243_W12_11H23USA2018genomic DNA9243_W12_11H23 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,14P,23*,27I,75D,80*,83L,97K,101R,116R,117*,120H,121T,127R,133*,137R,148V,156R,162K,173K,175K,180D,184*,220R,222R
MN0903409243_W12_2F15_S97USA2018genomic DNA9243_W12_2F15_S97 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,14P,27I,75D,83L,120H,128D,148V,180D
MN0903419243_W12_2G12_S99USA2018genomic DNA9243_W12_2G12_S99 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316L,14P,27I,75D,83L,120H,121T,148V,180D
MN0903429243_W12_2G5_S98USA2018genomic DNA9243_W12_2G5_S98 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,14P,23*,27I,75D,80*,83L,137R,148V,162K,180D,229K
MN0903439243_W12_2H7_S100USA2018genomic DNA9243_W12_2H7_S100 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316L,14P,27I,75D,83L,148V,180D
MN0903449243_W12_2L18_S104USA2018genomic DNA9243_W12_2L18_S104 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,14P,27I,75D,83L,120H,128D,148V,180D
MN0903459243_W12_4F7_S124USA2018genomic DNA9243_W12_4F7_S124 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316L,14P,27I,75D,83L,120H,121T,148V,180D
MN0903469243_W12_4H17_S128USA2018genomic DNA9243_W12_4H17_S128 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316L,14P,27I,75D,83L,120H,148V,180D
MN0903479243_W12_8K2USA2018genomic DNA9243_W12_8K2 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,14P,27I,75D,83L,148V,180D
MN0903489243_W12_8M11USA2018genomic DNA9243_W12_8M11 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,14P,27I,75D,83L,148V,180D
MN0903499243_W12_9B18USA2018genomic DNA9243_W12_9B18 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,14P,27I,75D,83L,148V,180D
MN0903509243_W12_9M17USA2018genomic DNA9243_W12_9M17 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,14P,27I,75D,83L,148V,180D
MN0904099244_W-2_10K4USA2018genomic DNA9244_W-2_10K4 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,83L
MN0904109244_W-2_10L20USA2018genomic DNA9244_W-2_10L20 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,83L
MN0904119244_W-2_10M18USA2018genomic DNA9244_W-2_10M18 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,83L
MN0904129244_W-2_11H13USA2018genomic DNA9244_W-2_11H13 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,83L
MN0904139244_W-2_11H9USA2018genomic DNA9244_W-2_11H9 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,8R,23*,80*,83L,100K,116R,127K,156R,167Q,173K,184*,222R,223R
MN0904149244_W-2_11J13USA2018genomic DNA9244_W-2_11J13 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,83L
MN0904159244_W-2_11J9USA2018genomic DNA9244_W-2_11J9 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,83L
MN0904169244_W-2_11M3USA2018genomic DNA9244_W-2_11M3 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,83L
MN0904179244_W-2_11N2USA2018genomic DNA9244_W-2_11N2 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,83L,194S,219R
MN0904189244_W-2_11O9USA2018genomic DNA9244_W-2_11O9 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,83L
MN0904199244_W-2_3J13_S172USA2018genomic DNA9244_W-2_3J13_S172 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,83L
MN0904209244_W-2_3O7_S175USA2018genomic DNA9244_W-2_3O7_S175 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,83L
MN0904219244_W-2_4K13_S185USA2018genomic DNA9244_W-2_4K13_S185 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,83L
MN0904229244_W-2_4L2_S187USA2018genomic DNA9244_W-2_4L2_S187 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,83L
MN0904239244_W-2_4O15_S191USA2018genomic DNA9244_W-2_4O15_S191 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,83L
MN0904249244_W-2_5H11_S200USA2018genomic DNA9244_W-2_5H11_S200 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,83L
MN0904259244_W-2_5K20_S202USA2018genomic DNA9244_W-2_5K20_S202 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,83L
MN0904269244_W-2_6D13_S210USA2018genomic DNA9244_W-2_6D13_S210 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,83L
MN0904279244_W-2_6D17_S211USA2018genomic DNA9244_W-2_6D17_S211 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,83L
MN0904289244_W-2_6D22_S212USA2018genomic DNA9244_W-2_6D22_S212 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,83L
MN0904299244_W-2_6I9_S216USA2018genomic DNA9244_W-2_6I9_S216 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,83L
MN0904309244_W-2_6L17_S219USA2018genomic DNA9244_W-2_6L17_S219 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,83L
MN0904319244_W-2_6M12_S221USA2018genomic DNA9244_W-2_6M12_S221 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,83L
MN0904329244_W-2_7I14USA2018genomic DNA9244_W-2_7I14 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,83L
MN0904339244_W-2_7O14USA2018genomic DNA9244_W-2_7O14 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,83L,180D
MN0904349244_W-2_7P1USA2018genomic DNA9244_W-2_7P1 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,83L
MN0904359244_W-2_8E5USA2018genomic DNA9244_W-2_8E5 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,8R,23*,28K,45K,60E,65T,80*,83L,89R,100K,116R,117*,127E,133*,137R,159K,173K,184*,206S,222R,223R
MN0904369244_W-2_8L22USA2018genomic DNA9244_W-2_8L22 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,83L
MN0904379244_W-2_8N14USA2018genomic DNA9244_W-2_8N14 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,23*,80*,83L,128K,162K,184*,212K,213K
MN0904389244_W-2_8P1USA2018genomic DNA9244_W-2_8P1 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (intact);subtype: B12316M,83L
MN0904399244_W-2_9A20USA2018genomic DNA9244_W-2_9A20 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,83L
MN0904409244_W-2_9O12USA2018genomic DNA9244_W-2_9O12 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,83L
MN0903689244_W12_10G7USA2018genomic DNA9244_W12_10G7 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,83L
MN0903699244_W12_10I16USA2018genomic DNA9244_W12_10I16 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,83L
MN0903709244_W12_10K3USA2018genomic DNA9244_W12_10K3 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,83L
MN0903719244_W12_10L17USA2018genomic DNA9244_W12_10L17 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,83L
MN0903729244_W12_10L5USA2018genomic DNA9244_W12_10L5 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,83L
MN0903739244_W12_10M15USA2018genomic DNA9244_W12_10M15 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,83L
MN0903749244_W12_10N12USA2018genomic DNA9244_W12_10N12 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,83L
MN0903759244_W12_10P8USA2018genomic DNA9244_W12_10P8 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,83L
MN0903779244_W12_11P22USA2018genomic DNA9244_W12_11P22 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,83L
MN0903789244_W12_3C17_S232USA2018genomic DNA9244_W12_3C17_S232 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,83L
MN0903799244_W12_3D15_S353USA2018genomic DNA9244_W12_3D15_S353 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,83L
MN0903809244_W12_3E20_S234USA2018genomic DNA9244_W12_3E20_S234 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,83L
MN0903819244_W12_3I15_S357USA2018genomic DNA9244_W12_3I15_S357 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,83L
MN0903829244_W12_3L19_S239USA2018genomic DNA9244_W12_3L19_S239 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,83L
MN0903839244_W12_3P8_S360USA2018genomic DNA9244_W12_3P8_S360 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,83L
MN0903849244_W12_4B3_S241USA2018genomic DNA9244_W12_4B3_S241 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,83L
MN0903859244_W12_4C12_S242USA2018genomic DNA9244_W12_4C12_S242 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,83L
MN0903869244_W12_4C13_S243USA2018genomic DNA9244_W12_4C13_S243 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,83L,127R
MN0903879244_W12_4D7_S244USA2018genomic DNA9244_W12_4D7_S244 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,83L
MN0903889244_W12_4H9_S247USA2018genomic DNA9244_W12_4H9_S247 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,83L
MN0903899244_W12_4N1_S248USA2018genomic DNA9244_W12_4N1_S248 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,83L
MN0903909244_W12_5A11_S251USA2018genomic DNA9244_W12_5A11_S251 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,83L
MN0903919244_W12_5A6_S370USA2018genomic DNA9244_W12_5A6_S370 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,8R,23*,80*,83L,100K,116R,127K,156R,167Q,173K,184*,222R,223R
MN0903929244_W12_5B13_S252USA2018genomic DNA9244_W12_5B13_S252 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,83L,180D
MN0903939244_W12_5K24_S256USA2018genomic DNA9244_W12_5K24_S256 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,83L
MN0903949244_W12_6A21_S259USA2018genomic DNA9244_W12_6A21_S259 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,83L,180D
MN0903959244_W12_6B10_S261USA2018genomic DNA9244_W12_6B10_S261 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,83L
MN0903969244_W12_6B4_S260USA2018genomic DNA9244_W12_6B4_S260 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,83L
MN0903979244_W12_6N13_S266USA2018genomic DNA9244_W12_6N13_S266 HIV-1 isolate from USAQuadruplex qPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,83L
MN0903989244_W12_7E22USA2018genomic DNA9244_W12_7E22 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,8R,23*,80*,83L,116R,117*,127R,133*,137R,180D,184*
MN0903999244_W12_7H24USA2018genomic DNA9244_W12_7H24 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,83L,180D
MN0904009244_W12_7P15USA2018genomic DNA9244_W12_7P15 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,83L
MN0904019244_W12_8A23USA2018genomic DNA9244_W12_8A23 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,83L
MN0904029244_W12_8E22USA2018genomic DNA9244_W12_8E22 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,83L
MN0904039244_W12_9D11USA2018genomic DNA9244_W12_9D11 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,83L
MN0904049244_W12_9G2USA2018genomic DNA9244_W12_9G2 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,83L
MN0904059244_W12_9I21USA2018genomic DNA9244_W12_9I21 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,83L
MN0904069244_W12_9K23USA2018genomic DNA9244_W12_9K23 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,8R,23*,80*,83L,100K,116R,127K,156R,167Q,173K,184*,222R,223R
MN0904079244_W12_9L17USA2018genomic DNA9244_W12_9L17 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,83L
MN0904089244_W12_9N20USA2018genomic DNA9244_W12_9N20 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,83L
MN0906379252_W-2_2A11USA2018genomic DNA9252_W-2_2A11 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906389252_W-2_2B21USA2018genomic DNA9252_W-2_2B21 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906399252_W-2_2B7USA2018genomic DNA9252_W-2_2B7 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906409252_W-2_2B8USA2018genomic DNA9252_W-2_2B8 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906419252_W-2_2B9USA2018genomic DNA9252_W-2_2B9 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906429252_W-2_2C5USA2018genomic DNA9252_W-2_2C5 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906439252_W-2_2D15USA2018genomic DNA9252_W-2_2D15 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906449252_W-2_2E11USA2018genomic DNA9252_W-2_2E11 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906459252_W-2_2E21USA2018genomic DNA9252_W-2_2E21 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906469252_W-2_2F12USA2018genomic DNA9252_W-2_2F12 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906479252_W-2_2F15USA2018genomic DNA9252_W-2_2F15 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906489252_W-2_2F3USA2018genomic DNA9252_W-2_2F3 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (intact);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906499252_W-2_2G17USA2018genomic DNA9252_W-2_2G17 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906509252_W-2_2G6USA2018genomic DNA9252_W-2_2G6 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906519252_W-2_2H2USA2018genomic DNA9252_W-2_2H2 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906529252_W-2_2H23USA2018genomic DNA9252_W-2_2H23 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906539252_W-2_2I21USA2018genomic DNA9252_W-2_2I21 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906549252_W-2_2J21USA2018genomic DNA9252_W-2_2J21 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906559252_W-2_2K8USA2018genomic DNA9252_W-2_2K8 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906569252_W-2_2M6USA2018genomic DNA9252_W-2_2M6 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (intact);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906579252_W-2_2N16USA2018genomic DNA9252_W-2_2N16 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906589252_W-2_2O6USA2018genomic DNA9252_W-2_2O6 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906599252_W-2_2P1USA2018genomic DNA9252_W-2_2P1 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (intact);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906609252_W-2_2P5USA2018genomic DNA9252_W-2_2P5 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906619252_W-2_3A13USA2018genomic DNA9252_W-2_3A13 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906629252_W-2_3A4USA2018genomic DNA9252_W-2_3A4 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906639252_W-2_3B13USA2018genomic DNA9252_W-2_3B13 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906649252_W-2_3B24USA2018genomic DNA9252_W-2_3B24 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906659252_W-2_3C13USA2018genomic DNA9252_W-2_3C13 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906669252_W-2_3C16USA2018genomic DNA9252_W-2_3C16 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906679252_W-2_3D23USA2018genomic DNA9252_W-2_3D23 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906689252_W-2_3D9USA2018genomic DNA9252_W-2_3D9 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906699252_W-2_3E2USA2018genomic DNA9252_W-2_3E2 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906709252_W-2_3E5USA2018genomic DNA9252_W-2_3E5 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (intact);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906719252_W-2_3F10USA2018genomic DNA9252_W-2_3F10 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906729252_W-2_3G18USA2018genomic DNA9252_W-2_3G18 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96L,116A,120H,124V,148V,183G,208G,225S
MN0906739252_W-2_3I19USA2018genomic DNA9252_W-2_3I19 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906749252_W-2_3J12USA2018genomic DNA9252_W-2_3J12 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906759252_W-2_3J19USA2018genomic DNA9252_W-2_3J19 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906769252_W-2_3K12USA2018genomic DNA9252_W-2_3K12 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906779252_W-2_3K20USA2018genomic DNA9252_W-2_3K20 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906789252_W-2_3K4USA2018genomic DNA9252_W-2_3K4 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906799252_W-2_3K5USA2018genomic DNA9252_W-2_3K5 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906809252_W-2_3L1USA2018genomic DNA9252_W-2_3L1 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906819252_W-2_3L18USA2018genomic DNA9252_W-2_3L18 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906829252_W-2_3N4USA2018genomic DNA9252_W-2_3N4 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96L,116A,120H,124V,148V,183G,208G,225S
MN0906839252_W-2_3O16USA2018genomic DNA9252_W-2_3O16 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906849252_W-2_3O2USA2018genomic DNA9252_W-2_3O2 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (intact);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906859252_W-2_3P4USA2018genomic DNA9252_W-2_3P4 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906869252_W-2_4A19USA2018genomic DNA9252_W-2_4A19 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906879252_W-2_4B13USA2018genomic DNA9252_W-2_4B13 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906889252_W-2_4C2USA2018genomic DNA9252_W-2_4C2 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96L,116A,120H,124V,148V,183G,208G,225S
MN0906899252_W-2_4E10USA2018genomic DNA9252_W-2_4E10 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906909252_W-2_4E20USA2018genomic DNA9252_W-2_4E20 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906919252_W-2_4E4USA2018genomic DNA9252_W-2_4E4 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906929252_W-2_4F1USA2018genomic DNA9252_W-2_4F1 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906939252_W-2_4G2USA2018genomic DNA9252_W-2_4G2 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906949252_W-2_4H7USA2018genomic DNA9252_W-2_4H7 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906959252_W-2_4J1USA2018genomic DNA9252_W-2_4J1 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906969252_W-2_4J14USA2018genomic DNA9252_W-2_4J14 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906979252_W-2_4L12USA2018genomic DNA9252_W-2_4L12 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906989252_W-2_4L19USA2018genomic DNA9252_W-2_4L19 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906999252_W-2_4L7USA2018genomic DNA9252_W-2_4L7 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96L,116A,120H,124V,148V,183G,208G,225S
MN0907009252_W-2_4N2USA2018genomic DNA9252_W-2_4N2 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (intact);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0907019252_W-2_5A5USA2018genomic DNA9252_W-2_5A5 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S,230I
MN0907029252_W-2_5B13USA2018genomic DNA9252_W-2_5B13 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0907039252_W-2_5C9USA2018genomic DNA9252_W-2_5C9 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0907049252_W-2_5D15USA2018genomic DNA9252_W-2_5D15 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0907059252_W-2_5D19USA2018genomic DNA9252_W-2_5D19 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0907069252_W-2_5F16USA2018genomic DNA9252_W-2_5F16 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0907079252_W-2_5G19USA2018genomic DNA9252_W-2_5G19 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0907089252_W-2_5G5USA2018genomic DNA9252_W-2_5G5 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0907099252_W-2_5H1USA2018genomic DNA9252_W-2_5H1 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0907109252_W-2_5I12USA2018genomic DNA9252_W-2_5I12 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,152G,183G,208G,225S
MN0907119252_W-2_5I16USA2018genomic DNA9252_W-2_5I16 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0907129252_W-2_5I8USA2018genomic DNA9252_W-2_5I8 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0907139252_W-2_5J10USA2018genomic DNA9252_W-2_5J10 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0907149252_W-2_5K22USA2018genomic DNA9252_W-2_5K22 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0907159252_W-2_5K24USA2018genomic DNA9252_W-2_5K24 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0907169252_W-2_5M14USA2018genomic DNA9252_W-2_5M14 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0907179252_W-2_5O19USA2018genomic DNA9252_W-2_5O19 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0907189252_W-2_5P5USA2018genomic DNA9252_W-2_5P5 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0907199252_W-2_6B3USA2018genomic DNA9252_W-2_6B3 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96L,116A,120H,124V,148V,183G,208G,225S
MN0907209252_W-2_6D10USA2018genomic DNA9252_W-2_6D10 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0907219252_W-2_6E21USA2018genomic DNA9252_W-2_6E21 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0907229252_W-2_6F18USA2018genomic DNA9252_W-2_6F18 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0907239252_W-2_6G21USA2018genomic DNA9252_W-2_6G21 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0907249252_W-2_6H15USA2018genomic DNA9252_W-2_6H15 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0907259252_W-2_6I1USA2018genomic DNA9252_W-2_6I1 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0907269252_W-2_6I16USA2018genomic DNA9252_W-2_6I16 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0907279252_W-2_6K15USA2018genomic DNA9252_W-2_6K15 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0907289252_W-2_6L3USA2018genomic DNA9252_W-2_6L3 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0907299252_W-2_6M6USA2018genomic DNA9252_W-2_6M6 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0907309252_W-2_6N17USA2018genomic DNA9252_W-2_6N17 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0907319252_W-2_6O12USA2018genomic DNA9252_W-2_6O12 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0907329252_W-2_6O21USA2018genomic DNA9252_W-2_6O21 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96L,116A,120H,124V,148V,183G,208G,225S
MN0907339252_W-2_6P1USA2018genomic DNA9252_W-2_6P1 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904419252_W12_2B14USA2018genomic DNA9252_W12_2B14 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904429252_W12_2C17USA2018genomic DNA9252_W12_2C17 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904439252_W12_2C23USA2018genomic DNA9252_W12_2C23 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904449252_W12_2C24USA2018genomic DNA9252_W12_2C24 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904459252_W12_2C8USA2018genomic DNA9252_W12_2C8 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904469252_W12_2C9USA2018genomic DNA9252_W12_2C9 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904479252_W12_2D15USA2018genomic DNA9252_W12_2D15 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904489252_W12_2D16USA2018genomic DNA9252_W12_2D16 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904499252_W12_2D2USA2018genomic DNA9252_W12_2D2 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904509252_W12_2D5USA2018genomic DNA9252_W12_2D5 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904519252_W12_2E18USA2018genomic DNA9252_W12_2E18 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904529252_W12_2E2USA2018genomic DNA9252_W12_2E2 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904539252_W12_2F16USA2018genomic DNA9252_W12_2F16 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904549252_W12_2F6USA2018genomic DNA9252_W12_2F6 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904559252_W12_2G1USA2018genomic DNA9252_W12_2G1 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904569252_W12_2G11USA2018genomic DNA9252_W12_2G11 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904579252_W12_2G14USA2018genomic DNA9252_W12_2G14 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904589252_W12_2G2USA2018genomic DNA9252_W12_2G2 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904599252_W12_2G9USA2018genomic DNA9252_W12_2G9 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904609252_W12_2H10USA2018genomic DNA9252_W12_2H10 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904619252_W12_2H9USA2018genomic DNA9252_W12_2H9 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904629252_W12_2J13USA2018genomic DNA9252_W12_2J13 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904639252_W12_2J5USA2018genomic DNA9252_W12_2J5 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904649252_W12_2K16USA2018genomic DNA9252_W12_2K16 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904659252_W12_2K7USA2018genomic DNA9252_W12_2K7 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904669252_W12_2L13USA2018genomic DNA9252_W12_2L13 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904679252_W12_2L14USA2018genomic DNA9252_W12_2L14 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904689252_W12_2L18USA2018genomic DNA9252_W12_2L18 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904699252_W12_2L9USA2018genomic DNA9252_W12_2L9 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904709252_W12_2M1USA2018genomic DNA9252_W12_2M1 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904719252_W12_2M19USA2018genomic DNA9252_W12_2M19 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904729252_W12_2M9USA2018genomic DNA9252_W12_2M9 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (intact);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904739252_W12_2N1USA2018genomic DNA9252_W12_2N1 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904749252_W12_2N10USA2018genomic DNA9252_W12_2N10 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904759252_W12_2N14USA2018genomic DNA9252_W12_2N14 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904769252_W12_2N21USA2018genomic DNA9252_W12_2N21 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904779252_W12_2O1USA2018genomic DNA9252_W12_2O1 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904789252_W12_2O14USA2018genomic DNA9252_W12_2O14 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904799252_W12_2O19USA2018genomic DNA9252_W12_2O19 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904809252_W12_2O21USA2018genomic DNA9252_W12_2O21 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904819252_W12_2O8USA2018genomic DNA9252_W12_2O8 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904829252_W12_3A11USA2018genomic DNA9252_W12_3A11 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904839252_W12_3A15USA2018genomic DNA9252_W12_3A15 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904849252_W12_3A3USA2018genomic DNA9252_W12_3A3 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904859252_W12_3A7USA2018genomic DNA9252_W12_3A7 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904869252_W12_3B17USA2018genomic DNA9252_W12_3B17 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904879252_W12_3C21USA2018genomic DNA9252_W12_3C21 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904889252_W12_3C8USA2018genomic DNA9252_W12_3C8 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904899252_W12_3C9USA2018genomic DNA9252_W12_3C9 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904909252_W12_3D14USA2018genomic DNA9252_W12_3D14 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904919252_W12_3D17USA2018genomic DNA9252_W12_3D17 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904929252_W12_3D21USA2018genomic DNA9252_W12_3D21 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904939252_W12_3D23USA2018genomic DNA9252_W12_3D23 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904949252_W12_3E16USA2018genomic DNA9252_W12_3E16 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904959252_W12_3E4USA2018genomic DNA9252_W12_3E4 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904969252_W12_3F10USA2018genomic DNA9252_W12_3F10 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904979252_W12_3F6USA2018genomic DNA9252_W12_3F6 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (intact);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904989252_W12_3G24USA2018genomic DNA9252_W12_3G24 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0904999252_W12_3H14USA2018genomic DNA9252_W12_3H14 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905009252_W12_3H2USA2018genomic DNA9252_W12_3H2 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905019252_W12_3H22USA2018genomic DNA9252_W12_3H22 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905029252_W12_3H6USA2018genomic DNA9252_W12_3H6 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905039252_W12_3I16USA2018genomic DNA9252_W12_3I16 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905049252_W12_3J1USA2018genomic DNA9252_W12_3J1 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905059252_W12_3J24USA2018genomic DNA9252_W12_3J24 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905069252_W12_3J3USA2018genomic DNA9252_W12_3J3 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905079252_W12_3J5USA2018genomic DNA9252_W12_3J5 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905089252_W12_3K5USA2018genomic DNA9252_W12_3K5 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905099252_W12_3K6USA2018genomic DNA9252_W12_3K6 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905109252_W12_3K7USA2018genomic DNA9252_W12_3K7 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905119252_W12_3L7USA2018genomic DNA9252_W12_3L7 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905129252_W12_3M1USA2018genomic DNA9252_W12_3M1 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905139252_W12_3M13USA2018genomic DNA9252_W12_3M13 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905149252_W12_3M2USA2018genomic DNA9252_W12_3M2 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905159252_W12_3N3USA2018genomic DNA9252_W12_3N3 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905169252_W12_3O10USA2018genomic DNA9252_W12_3O10 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905179252_W12_3O14USA2018genomic DNA9252_W12_3O14 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905189252_W12_3O18USA2018genomic DNA9252_W12_3O18 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905199252_W12_3O4USA2018genomic DNA9252_W12_3O4 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905209252_W12_3O6USA2018genomic DNA9252_W12_3O6 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905219252_W12_3P23USA2018genomic DNA9252_W12_3P23 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905229252_W12_3P7USA2018genomic DNA9252_W12_3P7 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905239252_W12_4A22USA2018genomic DNA9252_W12_4A22 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905249252_W12_4A3USA2018genomic DNA9252_W12_4A3 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905259252_W12_4A7USA2018genomic DNA9252_W12_4A7 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905269252_W12_4B18USA2018genomic DNA9252_W12_4B18 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905279252_W12_4B20USA2018genomic DNA9252_W12_4B20 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905289252_W12_4B4USA2018genomic DNA9252_W12_4B4 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905299252_W12_4B9USA2018genomic DNA9252_W12_4B9 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905309252_W12_4C2USA2018genomic DNA9252_W12_4C2 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905319252_W12_4C7USA2018genomic DNA9252_W12_4C7 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (intact);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905329252_W12_4D22USA2018genomic DNA9252_W12_4D22 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905339252_W12_4D24USA2018genomic DNA9252_W12_4D24 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905349252_W12_4D9USA2018genomic DNA9252_W12_4D9 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905359252_W12_4E5USA2018genomic DNA9252_W12_4E5 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905369252_W12_4F21USA2018genomic DNA9252_W12_4F21 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905379252_W12_4F3USA2018genomic DNA9252_W12_4F3 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905389252_W12_4G12USA2018genomic DNA9252_W12_4G12 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905399252_W12_4G2USA2018genomic DNA9252_W12_4G2 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96L,116A,120H,124V,148V,183G,208G,225S
MN0905409252_W12_4H3USA2018genomic DNA9252_W12_4H3 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905419252_W12_4I10USA2018genomic DNA9252_W12_4I10 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905429252_W12_4I6USA2018genomic DNA9252_W12_4I6 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (intact);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905439252_W12_4J1USA2018genomic DNA9252_W12_4J1 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905449252_W12_4J8USA2018genomic DNA9252_W12_4J8 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905459252_W12_4K16USA2018genomic DNA9252_W12_4K16 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905469252_W12_4K3USA2018genomic DNA9252_W12_4K3 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905479252_W12_4K7USA2018genomic DNA9252_W12_4K7 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905489252_W12_4L14USA2018genomic DNA9252_W12_4L14 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905499252_W12_4L20USA2018genomic DNA9252_W12_4L20 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905509252_W12_4L22USA2018genomic DNA9252_W12_4L22 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905519252_W12_4M16USA2018genomic DNA9252_W12_4M16 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905529252_W12_4M19USA2018genomic DNA9252_W12_4M19 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905539252_W12_4M3USA2018genomic DNA9252_W12_4M3 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905549252_W12_4M8USA2018genomic DNA9252_W12_4M8 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905559252_W12_4N11USA2018genomic DNA9252_W12_4N11 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905569252_W12_4N12USA2018genomic DNA9252_W12_4N12 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905579252_W12_4N17USA2018genomic DNA9252_W12_4N17 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905589252_W12_4N6USA2018genomic DNA9252_W12_4N6 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905599252_W12_4N7USA2018genomic DNA9252_W12_4N7 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905609252_W12_4O20USA2018genomic DNA9252_W12_4O20 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905619252_W12_5A1USA2018genomic DNA9252_W12_5A1 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905629252_W12_5A13USA2018genomic DNA9252_W12_5A13 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905639252_W12_5A18USA2018genomic DNA9252_W12_5A18 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905649252_W12_5A24USA2018genomic DNA9252_W12_5A24 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905659252_W12_5B12USA2018genomic DNA9252_W12_5B12 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905669252_W12_5C3USA2018genomic DNA9252_W12_5C3 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905679252_W12_5C5USA2018genomic DNA9252_W12_5C5 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905689252_W12_5C7USA2018genomic DNA9252_W12_5C7 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905699252_W12_5D10USA2018genomic DNA9252_W12_5D10 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905709252_W12_5D2USA2018genomic DNA9252_W12_5D2 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905719252_W12_5E1USA2018genomic DNA9252_W12_5E1 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905729252_W12_5E10USA2018genomic DNA9252_W12_5E10 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905739252_W12_5E2USA2018genomic DNA9252_W12_5E2 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905749252_W12_5E21USA2018genomic DNA9252_W12_5E21 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905759252_W12_5E8USA2018genomic DNA9252_W12_5E8 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905769252_W12_5F22USA2018genomic DNA9252_W12_5F22 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905779252_W12_5G16USA2018genomic DNA9252_W12_5G16 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905789252_W12_5G5USA2018genomic DNA9252_W12_5G5 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905799252_W12_5G7USA2018genomic DNA9252_W12_5G7 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905809252_W12_5H1USA2018genomic DNA9252_W12_5H1 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905819252_W12_5H3USA2018genomic DNA9252_W12_5H3 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905829252_W12_5H6USA2018genomic DNA9252_W12_5H6 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G
MN0905839252_W12_5I2USA2018genomic DNA9252_W12_5I2 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905849252_W12_5I4USA2018genomic DNA9252_W12_5I4 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905859252_W12_5I8USA2018genomic DNA9252_W12_5I8 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905869252_W12_5J11USA2018genomic DNA9252_W12_5J11 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905879252_W12_5J12USA2018genomic DNA9252_W12_5J12 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905889252_W12_5J20USA2018genomic DNA9252_W12_5J20 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905899252_W12_5J23USA2018genomic DNA9252_W12_5J23 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905909252_W12_5M13USA2018genomic DNA9252_W12_5M13 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905919252_W12_5M14USA2018genomic DNA9252_W12_5M14 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905929252_W12_5M24USA2018genomic DNA9252_W12_5M24 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905939252_W12_5N12USA2018genomic DNA9252_W12_5N12 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905949252_W12_5N24USA2018genomic DNA9252_W12_5N24 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905959252_W12_5N3USA2018genomic DNA9252_W12_5N3 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905969252_W12_5O13USA2018genomic DNA9252_W12_5O13 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905979252_W12_5O2USA2018genomic DNA9252_W12_5O2 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905989252_W12_5O21USA2018genomic DNA9252_W12_5O21 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0905999252_W12_5O8USA2018genomic DNA9252_W12_5O8 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906009252_W12_5P12USA2018genomic DNA9252_W12_5P12 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906019252_W12_6A1USA2018genomic DNA9252_W12_6A1 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906029252_W12_6A18USA2018genomic DNA9252_W12_6A18 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906039252_W12_6A2USA2018genomic DNA9252_W12_6A2 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906049252_W12_6B18USA2018genomic DNA9252_W12_6B18 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906059252_W12_6B20USA2018genomic DNA9252_W12_6B20 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906069252_W12_6B5USA2018genomic DNA9252_W12_6B5 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906079252_W12_6B8USA2018genomic DNA9252_W12_6B8 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906089252_W12_6C2USA2018genomic DNA9252_W12_6C2 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906099252_W12_6C8USA2018genomic DNA9252_W12_6C8 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906109252_W12_6D3USA2018genomic DNA9252_W12_6D3 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906119252_W12_6D7USA2018genomic DNA9252_W12_6D7 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906129252_W12_6D9USA2018genomic DNA9252_W12_6D9 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906139252_W12_6E13USA2018genomic DNA9252_W12_6E13 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906149252_W12_6E16USA2018genomic DNA9252_W12_6E16 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906159252_W12_6G16USA2018genomic DNA9252_W12_6G16 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906169252_W12_6G7USA2018genomic DNA9252_W12_6G7 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906179252_W12_6G9USA2018genomic DNA9252_W12_6G9 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906189252_W12_6H23USA2018genomic DNA9252_W12_6H23 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906199252_W12_6H6USA2018genomic DNA9252_W12_6H6 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906209252_W12_6J12USA2018genomic DNA9252_W12_6J12 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906219252_W12_6K22USA2018genomic DNA9252_W12_6K22 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906229252_W12_6K4USA2018genomic DNA9252_W12_6K4 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906239252_W12_6M13USA2018genomic DNA9252_W12_6M13 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906249252_W12_6M14USA2018genomic DNA9252_W12_6M14 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906259252_W12_6M5USA2018genomic DNA9252_W12_6M5 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906269252_W12_6N1USA2018genomic DNA9252_W12_6N1 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906279252_W12_6N16USA2018genomic DNA9252_W12_6N16 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906289252_W12_6N20USA2018genomic DNA9252_W12_6N20 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906299252_W12_6N4USA2018genomic DNA9252_W12_6N4 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906309252_W12_6N7USA2018genomic DNA9252_W12_6N7 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906319252_W12_6O10USA2018genomic DNA9252_W12_6O10 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906329252_W12_6O13USA2018genomic DNA9252_W12_6O13 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906339252_W12_6O16USA2018genomic DNA9252_W12_6O16 HIV-1 isolate from USA QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906349252_W12_6O5USA2018genomic DNA9252_W12_6O5 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906359252_W12_6O6USA2018genomic DNA9252_W12_6O6 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0906369252_W12_6P1USA2018genomic DNA9252_W12_6P1 HIV-1 isolate from USA Quadruplex qPCR(Q4PCR) sequenced genome (msd mutation);subtype: B12316M,27I,87Q,91V,96I,116A,120H,124V,148V,183G,208G,225S
MN0908009254_W-2_2A10Germany2018genomic DNA9254_W-2_2A10 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,80*,89E,91V,100K,115V,116R,120S,133*,148V,180D
MN0908019254_W-2_2B7Germany2018genomic DNA9254_W-2_2B7 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,8R,23*,24I,36I,46R,80*,81N,91V,100K,101R,106R,115V,116R,117*,120S,127R,128K,133*,137R,143K,148V,156R,167Q,180D,184*,206R,220R,222R
MN0908029254_W-2_2C24Germany2018genomic DNA9254_W-2_2C24 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0908039254_W-2_2E11Germany2018genomic DNA9254_W-2_2E11 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0908049254_W-2_2F18Germany2018genomic DNA9254_W-2_2F18 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0908059254_W-2_2H5Germany2018genomic DNA9254_W-2_2H5 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0908069254_W-2_2I15Germany2018genomic DNA9254_W-2_2I15 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0908079254_W-2_2I22Germany2018genomic DNA9254_W-2_2I22 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0908089254_W-2_2J14Germany2018genomic DNA9254_W-2_2J14 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0908099254_W-2_2K4Germany2018genomic DNA9254_W-2_2K4 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0908109254_W-2_2L18Germany2018genomic DNA9254_W-2_2L18 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,80*,89E,91V,100K,115V,116R,120S,133*,148V,180D
MN0908119254_W-2_2L2Germany2018genomic DNA9254_W-2_2L2 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0908129254_W-2_2M11Germany2018genomic DNA9254_W-2_2M11 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0908139254_W-2_2M24Germany2018genomic DNA9254_W-2_2M24 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,91V,115V,120S,148V,180D
MN0908149254_W-2_2N16Germany2018genomic DNA9254_W-2_2N16 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0908159254_W-2_2O6Germany2018genomic DNA9254_W-2_2O6 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0908169254_W-2_3A19Germany2018genomic DNA9254_W-2_3A19 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0908179254_W-2_3D22Germany2018genomic DNA9254_W-2_3D22 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0908189254_W-2_3K8Germany2018genomic DNA9254_W-2_3K8 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0908199254_W-2_3L9Germany2018genomic DNA9254_W-2_3L9 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0908209254_W-2_3N1Germany2018genomic DNA9254_W-2_3N1 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0908219254_W-2_3N10Germany2018genomic DNA9254_W-2_3N10 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0908229254_W-2_3N4Germany2018genomic DNA9254_W-2_3N4 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0908239254_W-2_3O21Germany2018genomic DNA9254_W-2_3O21 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,91V,100K,115V,120S,148V,180D
MN0908249254_W-2_3P12Germany2018genomic DNA9254_W-2_3P12 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,8R,23*,24I,36I,46R,80*,81N,91V,100K,101R,106R,115V,116R,117*,120S,127R,128K,133*,137R,143K,148V,156R,167Q,180D,184*,206R,220R,222R
MN0908259254_W-2_4C16Germany2018genomic DNA9254_W-2_4C16 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0908269254_W-2_4D6Germany2018genomic DNA9254_W-2_4D6 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0908279254_W-2_4I23Germany2018genomic DNA9254_W-2_4I23 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,91V,115V,120S,148V,180D
MN0908289254_W-2_4K2Germany2018genomic DNA9254_W-2_4K2 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,60R,80*,91V,115V,116R,117*,120S,133*,148V,162K,180D,184*,206R
MN0908299254_W-2_4K6Germany2018genomic DNA9254_W-2_4K6 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0908309254_W-2_4L6Germany2018genomic DNA9254_W-2_4L6 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,23*,91V,100K,115V,120S,137R,148V,180D,206R
MN0908319254_W-2_5A16Germany2018genomic DNA9254_W-2_5A16 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0908329254_W-2_5B16Germany2018genomic DNA9254_W-2_5B16 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0908339254_W-2_5C6Germany2018genomic DNA9254_W-2_5C6 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0908349254_W-2_5D20Germany2018genomic DNA9254_W-2_5D20 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0908359254_W-2_5F20Germany2018genomic DNA9254_W-2_5F20 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0908369254_W-2_5F7Germany2018genomic DNA9254_W-2_5F7 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0908379254_W-2_5F9Germany2018genomic DNA9254_W-2_5F9 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0908389254_W-2_5G16Germany2018genomic DNA9254_W-2_5G16 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0908399254_W-2_5J3Germany2018genomic DNA9254_W-2_5J3 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0908409254_W-2_5M18Germany2018genomic DNA9254_W-2_5M18 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,8R,23*,80*,87R,91V,115V,120S,133*,148V,167Q,180D,184*
MN0908419254_W-2_5M19Germany2018genomic DNA9254_W-2_5M19 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0908429254_W-2_5M4Germany2018genomic DNA9254_W-2_5M4 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0908439254_W-2_5N23Germany2018genomic DNA9254_W-2_5N23 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0908449254_W-2_6B2Germany2018genomic DNA9254_W-2_6B2 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0908459254_W-2_6C22Germany2018genomic DNA9254_W-2_6C22 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0908469254_W-2_6E19Germany2018genomic DNA9254_W-2_6E19 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0908479254_W-2_6F14Germany2018genomic DNA9254_W-2_6F14 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0908489254_W-2_6F16Germany2018genomic DNA9254_W-2_6F16 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0908499254_W-2_6H14Germany2018genomic DNA9254_W-2_6H14 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0908509254_W-2_6H2Germany2018genomic DNA9254_W-2_6H2 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0908519254_W-2_6L16Germany2018genomic DNA9254_W-2_6L16 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0908529254_W-2_6L8Germany2018genomic DNA9254_W-2_6L8 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0908539254_W-2_6M13Germany2018genomic DNA9254_W-2_6M13 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,91V,115V,117*,120S,148V,180D,206R
MN0907349254_W12_2A21Germany2018genomic DNA9254_W12_2A21 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907359254_W12_2B13Germany2018genomic DNA9254_W12_2B13 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907369254_W12_2B20Germany2018genomic DNA9254_W12_2B20 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907379254_W12_2D10Germany2018genomic DNA9254_W12_2D10 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907389254_W12_2F17Germany2018genomic DNA9254_W12_2F17 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907399254_W12_2H15Germany2018genomic DNA9254_W12_2H15 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,91V,115V,120S,148V,180D
MN0907409254_W12_2H20Germany2018genomic DNA9254_W12_2H20 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907419254_W12_2H24Germany2018genomic DNA9254_W12_2H24 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,23*,80*,89R,91V,115V,116R,117*,120S,148V,156R,162K,180D,184*,206R,229K
MN0907429254_W12_2I1Germany2018genomic DNA9254_W12_2I1 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907439254_W12_2J18Germany2018genomic DNA9254_W12_2J18 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907449254_W12_2K21Germany2018genomic DNA9254_W12_2K21 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907459254_W12_2L17Germany2018genomic DNA9254_W12_2L17 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907469254_W12_2M11Germany2018genomic DNA9254_W12_2M11 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907479254_W12_2P10Germany2018genomic DNA9254_W12_2P10 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907489254_W12_2P3Germany2018genomic DNA9254_W12_2P3 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907499254_W12_3A12Germany2018genomic DNA9254_W12_3A12 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907509254_W12_3B13Germany2018genomic DNA9254_W12_3B13 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,91V,115V,120S,148V,180D
MN0907519254_W12_3B6Germany2018genomic DNA9254_W12_3B6 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907529254_W12_3D2Germany2018genomic DNA9254_W12_3D2 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907539254_W12_3E12Germany2018genomic DNA9254_W12_3E12 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907549254_W12_3G9Germany2018genomic DNA9254_W12_3G9 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907559254_W12_3J1Germany2018genomic DNA9254_W12_3J1 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907569254_W12_3L6Germany2018genomic DNA9254_W12_3L6 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907579254_W12_3P5Germany2018genomic DNA9254_W12_3P5 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907589254_W12_4A10Germany2018genomic DNA9254_W12_4A10 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907599254_W12_4B12Germany2018genomic DNA9254_W12_4B12 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907609254_W12_4B21Germany2018genomic DNA9254_W12_4B21 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907619254_W12_4D11Germany2018genomic DNA9254_W12_4D11 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907629254_W12_4F24Germany2018genomic DNA9254_W12_4F24 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907639254_W12_4G16Germany2018genomic DNA9254_W12_4G16 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907649254_W12_4H14Germany2018genomic DNA9254_W12_4H14 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907659254_W12_4H20Germany2018genomic DNA9254_W12_4H20 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907669254_W12_4H9Germany2018genomic DNA9254_W12_4H9 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907679254_W12_4K15Germany2018genomic DNA9254_W12_4K15 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907689254_W12_4K22Germany2018genomic DNA9254_W12_4K22 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907699254_W12_4L16Germany2018genomic DNA9254_W12_4L16 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907709254_W12_4M24Germany2018genomic DNA9254_W12_4M24 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907719254_W12_4P19Germany2018genomic DNA9254_W12_4P19 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907729254_W12_4P5Germany2018genomic DNA9254_W12_4P5 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316M,91V,115V,120S,148V,180D
MN0907739254_W12_5A15Germany2018genomic DNA9254_W12_5A15 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,23*,46R,60E,80*,91V,115V,117*,120S,148V,156R,180D,206R
MN0907749254_W12_5C10Germany2018genomic DNA9254_W12_5C10 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907759254_W12_5C16Germany2018genomic DNA9254_W12_5C16 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907769254_W12_5D22Germany2018genomic DNA9254_W12_5D22 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907779254_W12_5F24Germany2018genomic DNA9254_W12_5F24 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907789254_W12_5G9Germany2018genomic DNA9254_W12_5G9 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907799254_W12_5H19Germany2018genomic DNA9254_W12_5H19 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,91V,115V,120S,148V,180D
MN0907809254_W12_5I14Germany2018genomic DNA9254_W12_5I14 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907819254_W12_5I21Germany2018genomic DNA9254_W12_5I21 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907829254_W12_5I24Germany2018genomic DNA9254_W12_5I24 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907839254_W12_5J4Germany2018genomic DNA9254_W12_5J4 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907849254_W12_5K11Germany2018genomic DNA9254_W12_5K11 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907859254_W12_5K13Germany2018genomic DNA9254_W12_5K13 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,91V,115V,120S,148V,180D,206R
MN0907869254_W12_5M21Germany2018genomic DNA9254_W12_5M21 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907879254_W12_6A5Germany2018genomic DNA9254_W12_6A5 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,23*,80*,91V,115V,116R,120S,143K,148V,180D,206R,222R
MN0907889254_W12_6B20Germany2018genomic DNA9254_W12_6B20 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907899254_W12_6C4Germany2018genomic DNA9254_W12_6C4 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907909254_W12_6D17Germany2018genomic DNA9254_W12_6D17 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907919254_W12_6D5Germany2018genomic DNA9254_W12_6D5 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907929254_W12_6E20Germany2018genomic DNA9254_W12_6E20 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907939254_W12_6H15Germany2018genomic DNA9254_W12_6H15 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,8R,60E,80*,91V,100K,115V,117*,120S,143K,148V,180D,184*,206R
MN0907949254_W12_6J24Germany2018genomic DNA9254_W12_6J24 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907959254_W12_6L19Germany2018genomic DNA9254_W12_6L19 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907969254_W12_6M2Germany2018genomic DNA9254_W12_6M2 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907979254_W12_6M7Germany2018genomic DNA9254_W12_6M7 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0907989254_W12_6N18Germany2018genomic DNA9254_W12_6N18 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316M,91V,115V,120S,148V,180D
MN0907999254_W12_6N21Germany2018genomic DNA9254_W12_6N21 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316M,91V,115V,120S,148V,180D
MN0908979255_W-2_10O17Germany2018genomic DNA9255_W-2_10O17 HIV-1 isolate from GermanyQuadruplex qPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,15M,23*,44A,52I,68I,80*,83L,89R,91V,101R,106R,116R,117*,128D,133*,134V,137R,148V,154K,167Q,180D,181I,184*,206R,225S
MN0909059255_W-2_11I19Germany2018genomic DNA9255_W-2_11I19 HIV-1 isolate from GermanyQuadruplex qPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,15M,23*,27I,44A,52I,61R,68I,80*,83L,91V,117*,128N,133*,134V,148V,154K,167Q,180D,184*
MN0909339255_W-2_7G19Germany2018genomic DNA9255_W-2_7G19 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0909399255_W-2_8P21Germany2018genomic DNA9255_W-2_8P21 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,15M,23*,27I,44A,52I,68I,80*,83L,91V,117*,127E,128D,133*,134V,148V,154K,180D,184*
MN0908549255_W12_10F13Germany2018genomic DNA9255_W12_10F13 HIV-1 isolate from GermanyQuadruplex qPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0908559255_W12_10H20Germany2018genomic DNA9255_W12_10H20 HIV-1 isolate from GermanyQuadruplex qPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0908569255_W12_10K16Germany2018genomic DNA9255_W12_10K16 HIV-1 isolate from GermanyQuadruplex qPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0908579255_W12_10K8Germany2018genomic DNA9255_W12_10K8 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0908589255_W12_10K9Germany2018genomic DNA9255_W12_10K9 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0908599255_W12_10M21Germany2018genomic DNA9255_W12_10M21 HIV-1 isolate from GermanyQuadruplex qPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0908609255_W12_10N11Germany2018genomic DNA9255_W12_10N11 HIV-1 isolate from GermanyQuadruplex qPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0908619255_W12_11A1Germany2018genomic DNA9255_W12_11A1 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0908629255_W12_11B8Germany2018genomic DNA9255_W12_11B8 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0908639255_W12_11E12Germany2018genomic DNA9255_W12_11E12 HIV-1 isolate from GermanyQuadruplex qPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0908649255_W12_11H23Germany2018genomic DNA9255_W12_11H23 HIV-1 isolate from GermanyQuadruplex qPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,15M,23*,27I,44A,52I,68I,80*,83L,91V,101R,116R,117*,128D,133*,134V,137R,148V,154K,167Q,180D,220R,222R
MN0908659255_W12_2C19Germany2018genomic DNA9255_W12_2C19 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0908669255_W12_2F19Germany2018genomic DNA9255_W12_2F19 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0908679255_W12_3E22Germany2018genomic DNA9255_W12_3E22 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0908699255_W12_4B12Germany2018genomic DNA9255_W12_4B12 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0908709255_W12_4C21Germany2018genomic DNA9255_W12_4C21 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0908719255_W12_5A7Germany2018genomic DNA9255_W12_5A7 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0908729255_W12_5C8Germany2018genomic DNA9255_W12_5C8 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0908739255_W12_5L7Germany2018genomic DNA9255_W12_5L7 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0908749255_W12_6M14Germany2018genomic DNA9255_W12_6M14 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0908759255_W12_7C19Germany2018genomic DNA9255_W12_7C19 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0908769255_W12_7G19Germany2018genomic DNA9255_W12_7G19 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0908779255_W12_7L10Germany2018genomic DNA9255_W12_7L10 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0908789255_W12_7L2Germany2018genomic DNA9255_W12_7L2 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,15M,23*,44A,46R,52I,68I,71K,80*,82K,83L,91V,100K,103N,106R,116R,117*,127R,128D,133*,134V,137R,143K,148V,154K,180D,184*,206R,223R
MN0908799255_W12_7L22Germany2018genomic DNA9255_W12_7L22 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,15M,23*,27I,44A,52I,60K,68I,80*,83L,91V,100K,117*,128D,133*,134V,148V,154K,175K,180D,184*,222E
MN0908809255_W12_8B5Germany2018genomic DNA9255_W12_8B5 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0908819255_W12_8C6Germany2018genomic DNA9255_W12_8C6 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0908829255_W12_8D9Germany2018genomic DNA9255_W12_8D9 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0908839255_W12_8H4Germany2018genomic DNA9255_W12_8H4 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0908849255_W12_8J19Germany2018genomic DNA9255_W12_8J19 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,15M,23*,27I,44A,46R,52I,68I,80*,83L,91V,100K,127R,128D,133*,134V,148V,154K,180D,222R
MN0908859255_W12_8J3Germany2018genomic DNA9255_W12_8J3 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0908869255_W12_9A24Germany2018genomic DNA9255_W12_9A24 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,8R,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0908879255_W12_9A3Germany2018genomic DNA9255_W12_9A3 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0908889255_W12_9A8Germany2018genomic DNA9255_W12_9A8 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0908899255_W12_9B17Germany2018genomic DNA9255_W12_9B17 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0908909255_W12_9C16Germany2018genomic DNA9255_W12_9C16 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0908919255_W12_9C8Germany2018genomic DNA9255_W12_9C8 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,15M,23*,44A,46R,52I,60K,61R,68I,71K,76K,80*,81N,82K,83L,89R,91V,116R,117*,128D,133*,134V,137R,148V,154K,156R,167Q,180D,184*,206R
MN0908929255_W12_9L4Germany2018genomic DNA9255_W12_9L4 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,15M,44A,51N,52I,68I,83L,91V,101E,128D,134V,148V,154K,180D,213K
MN0908939255_W12_9M10Germany2018genomic DNA9255_W12_9M10 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0908949255_W12_9N19Germany2018genomic DNA9255_W12_9N19 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0908959255_W12_9O10Germany2018genomic DNA9255_W12_9O10 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0908969255_wk-2_10_K16Germany2018genomic DNA9255_wk-2_10K16 HIV-1 isolate from GermanyQuadruplex qPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0908989255_wk-2_11_A2Germany2018genomic DNA9255_wk-2_11A2 HIV-1 isolate from GermanyQuadruplex qPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0908999255_wk-2_11_A8Germany2018genomic DNA9255_wk-2_11A8 HIV-1 isolate from GermanyQuadruplex qPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0909009255_wk-2_11_C20Germany2018genomic DNA9255_wk-2_11C20 HIV-1 isolate from GermanyQuadruplex qPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0909019255_wk-2_11_C6Germany2018genomic DNA9255_wk-2_11C6 HIV-1 isolate from GermanyQuadruplex qPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0909029255_wk-2_11_D15Germany2018genomic DNA9255_wk-2_11D15 HIV-1 isolate from GermanyQuadruplex qPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,15M,44A,52I,68I,83L,91V,117*,128D,134V,148V,154K,180D
MN0909039255_wk-2_11_E3Germany2018genomic DNA9255_wk-2_11E3 HIV-1 isolate from GermanyQuadruplex qPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,15M,23*,44A,52I,68I,80*,83L,91V,100K,117*,128D,133*,134V,148V,154K,180D,184*,206R
MN0909049255_wk-2_11_G21Germany2018genomic DNA9255_wk-2_11_G21 HIV-1 isolate from GermanyQuadruplex qPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,15M,44A,51N,52I,68I,83L,91V,101E,128D,134V,148V,154K,180D,213K
MN0909069255_wk-2_11_P17Germany2018genomic DNA9255_wk-2_11P17 HIV-1 isolate from GermanyQuadruplex qPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0909079255_wk-2_2_F23Germany2018genomic DNA9255_wk-2_2F23 HIV-1 isolate from GermanyQuadruplex qPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0909089255_wk-2_2_H17Germany2018genomic DNA9255_wk-2_2H17 HIV-1 isolate from GermanyQuadruplex qPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,15M,23*,27I,44A,52I,68I,80*,83L,91V,101R,116R,117*,127R,128D,133*,134V,137R,148V,154K,167Q,180D,184*,222R
MN0909099255_wk-2_2_H22Germany2018genomic DNA9255_wk-2_2H22 HIV-1 isolate from GermanyQuadruplex qPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0909109255_wk-2_2_I15Germany2018genomic DNA9255_wk-2_2I15 HIV-1 isolate from GermanyQuadruplex qPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0909119255_wk-2_2_J23Germany2018genomic DNA9255_wk-2_2J23 HIV-1 isolate from GermanyQuadruplex qPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,15M,23*,44A,46R,52I,68I,80*,83L,91V,100K,106R,117*,128D,133*,134V,148V,154K,175K,180D,184*,222R
MN0909129255_wk-2_2_L4Germany2018genomic DNA9255_wk-2_2L4 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0909139255_wk-2_2_P6Germany2018genomic DNA9255_wk-2_2P6 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0909149255_wk-2_3_A6Germany2018genomic DNA9255_wk-2_3A6 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,15M,44A,51N,52I,68I,83L,91V,101E,128D,134V,148V,154K,180D,213K
MN0909159255_wk-2_3_E10Germany2018genomic DNA9255_wk-2_3E10 HIV-1 isolate from GermanyQuadruplex qPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0909169255_wk-2_3_N16Germany2018genomic DNA9255_wk-2_3N16 HIV-1 isolate from GermanyQuadruplex qPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0909179255_wk-2_3_O22Germany2018genomic DNA9255_wk-2_3O22 HIV-1 isolate from GermanyQuadruplex qPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0909189255_wk-2_4_C15Germany2018genomic DNA9255_wk-2_4C15 HIV-1 isolate from GermanyQuadruplex qPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0909199255_wk-2_4_E11Germany2018genomic DNA9255_wk-2_4E11 HIV-1 isolate from GermanyQuadruplex qPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0909209255_wk-2_4_L4Germany2018genomic DNA9255_wk-2_4L4 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0909219255_wk-2_5_B10Germany2018genomic DNA9255_wk-2_5B10 HIV-1 isolate from GermanyQuadruplex qPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,15M,44A,51N,52I,68I,83L,91V,101E,128D,134V,148V,154K,180D,213K
MN0909239255_wk-2_5_I23Germany2018genomic DNA9255_wk-2_5I23 HIV-1 isolate from GermanyQuadruplex qPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,15M,44A,51N,52I,68I,83L,91V,101E,128D,134V,148V,154K,180D,213K
MN0909249255_wk-2_5_J23Germany2018genomic DNA9255_wk-2_5J23 HIV-1 isolate from GermanyQuadruplex qPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0909259255_wk-2_5_K5Germany2018genomic DNA9255_wk-2_5K5 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,15M,29K,44A,52I,68I,83L,91V,128D,134V,143K,148V,154K,180D
MN0909269255_wk-2_5_P5Germany2018genomic DNA9255_wk-2_5P5 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,15M,44A,52I,68I,80*,83L,91V,128D,133*,134V,137R,148V,154K,180D,184*,222R
MN0909279255_wk-2_6_C12Germany2018genomic DNA9255_wk-2_6C12 HIV-1 isolate from GermanyQuadruplex qPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0909289255_wk-2_6_D9Germany2018genomic DNA9255_wk-2_6D9 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,15M,44A,52I,68I,83L,91V,100K,128D,133*,134V,137R,148V,154K,180D
MN0909299255_wk-2_6_F18Germany2018genomic DNA9255_wk-2_6F18 HIV-1 isolate from GermanyQuadruplex qPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0909309255_wk-2_6_I8Germany2018genomic DNA9255_wk-2_6I8 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,15M,27I,44A,52I,68I,80*,83L,91V,128D,133*,134V,148V,154K,180D,222E
MN0909319255_wk-2_6_K10Germany2018genomic DNA9255_wk-2_6K10 HIV-1 isolate from GermanyQuadruplex qPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0909329255_wk-2_7_G12Germany2018genomic DNA9255_wk-2_7G12 HIV-1 isolate from GermanyQuadruplex qPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0909349255_wk-2_7_K11Germany2018genomic DNA9255_wk-2_7K11 HIV-1 isolate from GermanyQuadruplex qPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0909359255_wk-2_8_A6Germany2018genomic DNA9255_wk-2_8A6 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (msd mutation);subtype: B12316L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0909369255_wk-2_8_B11Germany2018genomic DNA9255_wk-2_8B11 HIV-1 isolate from GermanyQuadruplex qPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0909379255_wk-2_8_G1Germany2018genomic DNA9255_wk-2_8G1 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0909389255_wk-2_8_K8Germany2018genomic DNA9255_wk-2_8K8 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,15M,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0909409255_wk-2_9_J18Germany2018genomic DNA9255_wk-2_9J18 HIV-1 isolate from GermanyQuadruplex qPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0909419255_wk-2_9_K9Germany2018genomic DNA9255_wk-2_9K9 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (intact);subtype: B12316L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0909429255_wk-2_9_L22Germany2018genomic DNA9255_wk-2_9_L22 HIV-1 isolate from GermanyQuadruplex qPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,15M,27I,44A,52I,68I,83L,91V,128D,134V,148V,154K,180D
MN0909439255_wk-2_9_M8Germany2018genomic DNA9255_wk-2_9M8 HIV-1 isolate from Germany QuadruplexqPCR (Q4PCR) sequenced genome (nonfunctional);subtype: B12316L,15M,23*,44A,52I,68I,80*,83L,91V,100K,117*,128D,133*,134V,148V,154K,180D,184*,206R

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