Genbank References: capsid (p24)

HIV Drug Resistance Database

HOME Genotype-Rx Genotype-Pheno Genotype-Clinical hivdb program

Genbank References: capsid (p24)

Authors	Title	Citation	E-value	# in Gb	#Pts	ART	Source	Cloning	StudyType
Bernardin (2016)	Human immunodeficiency virus mutations during the first month of infection are preferentially found in known cytotoxic T-lymphocyte epitopes	J. Virol. 79 (17), 11523-11528 (2005)	2.05e-154	18

Download sequences

Accession	IsolateName	Country	Coll Date	Clone	MolType	Source	Note	FirstAA	LastAA	MutList
AY331282	1001-07	USA			genomic RNA	African-American female, frequentplasma donor	sample obtained in 1997 during sero-conversionwindow;subtype: B	1	231	6L,14S,15L,27I,83L,91V,148V,154K,178T
AY331283	1001-09	USA			genomic RNA	African-American female, frequentplasma donor	sample obtained in 1997 during sero-conversionwindow;subtype: B	1	231	6L,14S,15L,27I,83L,91V,148V,154K,178T,180EG
AY331284	1006-08	USA			genomic RNA	African-American male, frequent plasmadonor	sample obtained in 1997 during sero-conversionwindow;subtype: B	1	231	6L,83L,154K,180D
AY332236	1006-10	USA			genomic RNA	African-American male, frequent plasmadonor; sample was obtained in 1997 during sero-conversionwindo	subtype: B	1	231	6L,83L,154K,180D
AY331285	1012-08	USA			genomic RNA	African-American male, frequent plasmadonor	sample obtained in 1997 during sero-conversionwindow;subtype: B	1	231	6L,15L,148I,160S
AY331286	1012-11	USA			genomic RNA	African-American male, frequent plasmadonor	sample obtained in 1997 during sero-conversionwindow;subtype: B	1	231	6L,15L,148I,160S
AY331287	1013-03	USA			genomic RNA	African-American male, frequent plasmadonor	sample obtained in 1997 during sero-conversionwindow;subtype: B	1	231	6L,15L,16T,27I,83L,96L,148V,154K,178T,208G
AY331288	1013-07	USA			genomic RNA	African-American male, frequent plasmadonor	sample obtained in 1997 during sero-conversionwindow;subtype: B	1	231	6L,15L,16T,27I,83L,96L,148V,154K,178T,208G
AY331289	1018-06	USA			genomic RNA	frequent plasma donor	sample obtained in 1997 during sero-conversionwindow;subtype: B	1	231	6L,16T,83L,120S,136M,148V,180D
AY331290	1018-10	USA			genomic RNA	frequent plasma donor	sample obtained in 1997 during sero-conversionwindow;subtype: B	1	231	6L,16T,83L,120S,136M,148V,180D
AY332237	1027-03	USA			genomic RNA	African-American female, frequentplasma donor; sample was obtained in 1996 duringsero-conversion win	subtype: B	1	231	41T,83L,91V,110N,148S,154K,194S
AY331291	1027-05	USA			genomic RNA	African-American female, frequentplasma donor	sample obtained in 1996 during sero-conversionwindow;subtype: B	1	231	41T,83L,91V,110N,148S,154K,194S
AY331292	1057-01	USA			genomic RNA	African-American male, frequent plasmadonor	sample obtained in 1996 during sero-conversionwindow;subtype: B	1	231	6L,83L,109CS,115V,120S
AY331293	1057-09	USA			genomic RNA	African-American male, frequent plasmadonor	sample obtained in 1997 during sero-conversionwindow;subtype: B	1	231	6L,83L,115V,120S
AY331294	1058-08	USA			genomic RNA	African-American male, frequent plasmadonor	sample obtained in 1998 during sero-conversionwindow;subtype: B	1	231	6L,27I,41A,83I,86A,87Q,96I,98D,116T,132K,136M
AY331295	1058-11	USA			genomic RNA	African-American male, frequent plasmadonor	sample obtained in 1998 during sero-conversionwindow;subtype: B	1	231	6L,27I,41A,83I,86A,87Q,96I,98D,116T,132K,136M
AY331296	PRB959-03	USA			genomic RNA	frequent plasma donor	sample obtained in 1999 during sero-conversionwindow;subtype: B	1	231	6L,14P,15L,41T,83L,86A,87Q,96I,116T,210S
AY331297	PRB959-05	USA			genomic RNA	frequent plasma donor	sample obtained in 1999 during sero-conversionwindow;subtype: B	1	231	6LP,14P,15L,41T,83L,86A,87Q,96I,110N,116T,210S

Database

Resources

Team