<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Louwagie (1993) Phylogenetic analysis of gag genes from 70 international HIV-1 isolates provides evidence for multiple genotypes AIDS 7 (6), 769-780 (1993) 6.95e-170 54 53 Naive Cultured PBMC Molecular clones Molecular epidemiology

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AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
L11751BZ162genomic DNA12316L,14S,27I,71D,83L,86A,87Q,92P,96I,116Q,120S,124V,148V,169F,178T,183G,187D,208G
L11752BZ167genomic DNA12316M,27I,71D,83L,128K,148I,180D
L11753BZ190genomic DNA12316L,44A,83L,136M,154K,194S
L11754BZ200genomic DNA12316L,80*,83L,133*,216S
L11755CI20genomic DNA12316A,11T,14S,15M,27I,41T,54M,58I,71D,92P,120S,124V,135V,148V,169F,178T,200S,203R,208G
L11756CI32genomic DNA12316L,15L,27I,41T,71D,116A,148V,200S,208G
L11757CI4genomic DNA12316A,14S,27I,54M,58I,71D,75G,92P,93L,120S,124V,131R,148V,169F,171C,178T,191I,200S,203R,207T,208G
L11758CI51genomic DNA12316A,11T,14S,26A,27I,30R,54M,58I,71D,83T,92P,107V,120S,124T,132K,148V,169F,178T,200S,203R,208G,217S
L11759CI59genomic DNA12316A,11T,14P,15M,27I,41T,54M,58I,71D,87Q,92P,110N,120S,135V,148V,169F,176*,178T,200S,203R,208G
L11760CM238genomic DNA12316A,14P,15L,29K,31G,33N,54M,58I,92P,128D,148I,178T,200S,207T,208G,225S
L11761CM240genomic DNA12316A,11A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
L11762CM245genomic DNA12316A,11A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207S,208G,225S
L11763DJ258genomic DNA12316A,14P,15M,27I,41T,54M,58I,71D,92P,120S,128D,148V,169F,178T,200S,203R,208G,217S
L11764DJ259genomic DNA12316L,14P,15L,27I,41T,71D,83L,110N,116A,120S,128D,148V,169F,180D,187D,203R,208G,210S,225S
L11765G109genomic DNA12316L,15L,27I,33N,41A,59A,83L,116A,120A,132K,136M,148V,180D,225S
L11766G141genomic DNA12316A,27I,54M,58I,71D,79D,83T,91A,92P,120S,148V,169F,178T,203R,208G
U43172Gabonese isolate VI354genomic DNAHIVVI35412316A,15M,27I,31G,51N,54I,58I,60K,71D,83I,87Q,92P,94S,96I,111T,120G,128K,132K,133*,148V,163E,166N,169F,175K,178T,184*,203R,204G,207A,208G,212K,220E,223E
L11767IC144genomic DNA12316A,11T,14P,27I,54M,58I,71D,92P,110N,114*,120S,135V,148V,169F,203R,208G
L11768K112genomic DNA12316A,11I,14N,15L,27I,54M,58I,71D,83L,92P,111P,120S,128D,148V,154K,169F,178T,183G,200S,203R,204G,207T,208G,230I
L11769K124genomic DNA12316A,11I,14S,15L,27I,54M,58I,71N,83L,92P,111P,120S,128D,148V,154K,169F,178T,183G,200S,203R,207A,208G,225S
L11770K29genomic DNA12316A,11T,14S,15L,27I,54M,58I,71D,83L,92P,111P,120G,128D,148V,154K,169F,178T,183G,191I,200S,203R,207A,208G,218S
L11771K31genomic DNA12316L,14V,15M,27I,83L,86A,148V,180D,208G
L11772K7genomic DNAisolated from lymphocytes12316A,8R,11I,14N,15L,23*,27I,34L,54V,58I,71D,80*,83L,92P,111P,115L,116Q,120S,128D,148V,156R,169F,171A,180D,183G,184*,200S,207T,208G,225S,229K
L11773K88genomic DNA12316A,11I,14T,15L,27I,54M,58I,71D,83L,92P,111P,120S,128D,148V,153V,154K,169F,178T,183G,200S,203R,207T,208G
L11774K89genomic DNA12316A,11I,12L,14T,15L,27I,54M,58I,71D,83L,92P,111P,115L,120S,128D,148V,154K,169F,178T,180D,200S,203R,207T,208G
L11775K98genomic DNA12316A,11I,14N,15L,27I,54V,58I,71D,83L,92P,111P,115L,116Q,120S,128D,148V,154K,169F,171A,178T,183G,200S,207T,208G
L11776LBV10-5genomic DNA12316V,14P,15V,21D,27I,31G,33N,54M,58I,71D,83T,87R,92P,118I,120S,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S
L11777LBV2-3genomic DNA12316A,11I,15L,26A,27I,41T,54M,58I,71D,87Q,91Y,92P,96L,112A,116Q,120S,128D,131R,132K,148V,169F,178T,180D,203R,207A,208G
L11778LBV21-7genomic DNA12316A,14P,71D,83I,86Q,87Q,92P,96I,98D,116R,120S,148V,169F,178T,180D,187D,208G,225S
L11779LBV23-10genomic DNA12316A,11T,14P,15M,27I,54M,58I,71D,92P,110N,120S,135V,148V,169F,171V,178T,200S,203R
L11780PH136genomic DNA12315K,6L,15L,83L,91V,136M,154K,225S
L11781PH153genomic DNA123183L,180D
L11797SG365genomic DNA12316L,15L,27I,31D,41T,83L,148V,178T,200N,208G,223E,225S
L11803SM145genomic DNA12316L,27I,36I,41T,71D,83L,87Q,91V,98D,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225A
L11798UG266genomic DNA12316T,8R,11T,12Y,15L,23*,49S,54M,58V,60E,71D,80*,83L,87Q,89R,92P,111V,115V,116R,117*,120S,131R,133*,148V,156E,162K,163E,167K,169F,178T,180D,184*,200S,203R,206R,208K,220R,222R,225S,229Q
L11799UG268genomic DNA12316L,15L,27I,41T,71D,83L,91V,116N,120S,148V,154K,169F,178T,180D,187D,203R,208G,210S
L11800UG270genomic DNA12316L,27I,54A,83L,110I,115V,120S,148V,180D,225S
L11801UG274genomic DNA12316L,27I,41T,120S,148V,180D,199R,208G,225S
L11802UG280genomic DNA123183L,154K,194S
L11782VI174genomic DNA12316L,27I,71D,83L,87Q,92P,96I,116Q,124V,148V,169F,178T,183G,187D,208G
L11783VI191genomic DNA12316A,14P,15L,16T,27I,31N,71D,83I,86P,87Q,92P,96I,116R,120S,128D,148V,169F,178T,183G,187D,203R,208G
L11784VI203genomic DNA12316L,15L,27I,33N,83L,120S,148V,178T,208G,225S
L11785VI205genomic DNA12316L,25E,27I,37T,63H,74I,83L,116A,120S,127K,128K,143K,148V,159K,180D,208Q,212K,220E,225S
L11786VI310genomic DNA12316A,14S,15L,27I,30R,54M,58I,71D,87Q,91V,92P,120S,124V,148V,169F,178T,180A,200S,207T,208G,225S,230I
L11787VI313genomic DNA12316L,14P,15M,27I,41T,71D,83L,87Q,91V,96I,116A,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S
L11788VI32genomic DNA12316A,11I,14S,15L,27I,39T,54M,58I,71D,72A,79G,83L,92P,111P,120S,128D,148V,154K,169F,178T,183G,200S,203R,208G
L11789VI325genomic DNA12316M,14P,15L,27I,44A,45D,71D,83L,92P,116T,120S,124V,148V,154K,160S,169F,178T,187D,208G,210S,230I
L11790VI354genomic DNA12316A,15M,27I,31G,51N,54I,58I,60K,71D,83I,87Q,92P,94S,96I,111T,120G,128K,132K,133*,148V,163E,166N,169F,175K,178T,184*,203R,204G,207A,208G,212K,220E,223E
L11791VI415genomic DNA12316A,11I,27I,54M,58I,71D,83L,92P,111T,116A,120G,124N,128D,153V,154K,169F,171I,178T,183G,203R,207T,208G
L11792VI525genomic DNA12316A,54A,68I,71D,83L,92P,116A,120G,123A,128D,148V,154K,169F,178T,180D,187D,200N,207T,208G,210S,211I,225S
L11793VI557genomic DNA12316A,10P,54A,58I,71D,92P,116A,120S,128D,148V,169F,171A,178T,183G,187D,203R,207Q,208G,210S,211I,229K
L11794VI57genomic DNA12316A,11I,15V,27I,54M,58I,71D,83L,92P,111P,120S,128D,148V,154K,169F,171V,180D,200S,203R,207T,208G,225S
L11795VI59genomic DNA12316A,10I,15L,18K,23*,42E,54M,58V,71D,80*,83L,89R,92P,100K,116R,117*,120G,128D,131R,148V,153V,156R,162K,169F,171I,178T,200S,204R,206R,207V,208R,229K
L11796VI69genomic DNA12316L,27I,71D,83L,91N,92P,116Q,120S,128D,148V,169F,176E,178T,183G,187D,191I,205M,208G

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