<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Balinda (2021) Characterization of Unique Recombinant Viruses Identified Within Subtype D HIV-1 Transmitted Founder Viruses in a Ugandan Acute Infection Cohort Viruses. 2022 Feb 7;14(2):334 7.4e-152 30 29 Naive Plasma SGS Molecular epidemiology

Download sequences

AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
MW006052191639Uganda03-Apr-2008genomic DNAsubtype: AD12316L,27I,83I,87Q,120S,148V,180D,208G
MW006053191696Uganda11-Sep-2007genomic DNAsubtype: AD12312V,6A,11I,14N,15L,27I,50H,54M,58I,71D,83I,91N,92P,93V,96L,111P,115L,116Q,120S,128D,148V,169F,171A,178T,183G,200S,207T,208G
MW006054191923Uganda24-Jan-2008genomic DNAsubtype: AD12316A,15V,27I,54M,58I,71D,83L,116A,120G,128D,148V,154K,169F,178T,180D,203R,225S
MW006055191955Uganda26-Mar-2007genomic DNAsubtype: AD12316A,11I,14P,15L,27I,29D,54M,58V,71D,91P,98D,111P,116A,120G,128D,148V,154K,180D,210S,225S
MW006056191996Uganda19-Sep-2008genomic DNAsubtype: AD123114P,27I,41T,83L,87Q,112A,115M,116A,118I,120G,148V,180D,194S
MW006057191997Uganda15-Jan-2008genomic DNAsubtype: AD12316L,15L,27I,41T,83L,86A,87Q,91V,110N,120S,148V,180D,194S
MW006058192002Uganda24-Jul-2007genomic DNAsubtype: D12316L,14S,15L,27I,41T,83L,87Q,91V,120S,148V,154K,178T
MW006059192023Uganda28-Jan-2008genomic DNAsubtype: AD12316L,14S,15L,26A,41M,45D,59I,83L,116A,120S,124V,148V,154K,177T,180D,200N,203R,225A
MW006060193004Uganda30-Oct-2007genomic DNAsubtype: AD12316M,15L,16T,41T,50S,54S,79D,83L,116A,120S,148V,180D,183T,205M,208G
MW006061193005Uganda06-Nov-2007genomic DNAsubtype: D12316L,31G,33N,83L,87Q,91A,148V,180D,208G,210S,225S
MW006062193006Uganda07-Apr-2009genomic DNAsubtype: ACD12316L,14P,15L,27I,31N,58A,71D,83L,91V,116A,120S,128D,148V,169F,178T,183H,187D,203R,208G,210S
MW006063193008Uganda15-Jun-2009genomic DNAsubtype: AD12316L,27I,75D,83L,91V,116A,120S,148V,171V,180D,225S
MW006064194020Uganda12-Jun-2009genomic DNAsubtype: AD12316L,27I,41T,83L,91V,118I,120G,136M,140R,143K,144L,148V,154K,162K,180D,225S
MW006065194037Uganda12-Aug-2009genomic DNAsubtype: D12316L,27I,83L,87Q,91V,110N,120G,148V,154K,180D,225S
MW006066194065Uganda12-Jan-2010genomic DNAsubtype: AD12316L,27I,83L,116A,120S,148V,180D,210S,225S
MW006067194140Uganda28-May-2009genomic DNAsubtype: AD12316L,14P,15L,16T,27I,31N,41T,59I,83L,115V,120S,148V,180D,208G,210S
MW006068194289Uganda29-Mar-2010genomic DNAsubtype: D12316A,11I,14P,27I,29D,41T,83L,110N,115M,116A,120G,148V,180D,203R,208G,210S,225S
MW006069194307Uganda02-Mar-2009genomic DNAsubtype: AD12316M,15L,16T,27I,41T,50S,54S,79D,83L,116A,120S,148V,180D,183T,208G
MW006070194319Uganda09-Mar-2009genomic DNAsubtype: AD12316L,15L,27I,31S,83L,87Q,110N,115V,116A,120A,148V,180D,225S
MW006071194346Uganda31-Mar-2009genomic DNAsubtype: AD12316L,27I,41T,83L,91Q,115V,116A,120G,148V,180D,225S
MW006072194374Uganda04-Feb-2010genomic DNAsubtype: D12312V,6L,14P,15M,27I,41T,50S,59I,83L,87Q,91A,93A,96L,110N,116A,120H,148V,180D,208G,210S,225S
MW006073194535Uganda16-Jun-2011genomic DNAsubtype: D12316L,27I,71D,83L,87Q,91V,110S,120S,148V,154K,177G,180D,205M,209~,225S
MW006074194584Uganda05-Jul-2010genomic DNAsubtype: AD12316L,15L,27I,50A,83L,94N,96I,110N,116A,120S,128D,148V,154K,180D,183T,225S
MW006075194603Uganda21-Jul-2010genomic DNAsubtype: AD12316L,27I,41T,83L,91A,120S,148V,180D,194S,208G
MW006076194604Uganda28-Mar-2011genomic DNAsubtype: D12316L,14P,27I,41T,71D,83L,135V,148V,170R,180D,208G
MW006077270015Uganda19-Dec-2006genomic DNAsubtype: AD12312V,6L,15L,27I,54V,79D,83I,91V,120S,136M,148V,154K,180D,208G,225S
MW006078270535Uganda17-Dec-2008genomic DNAsubtype: D12316L,27I,83L,116A,120G,123V,148V,180D,225S
MW006079275026Uganda10-Sep-2008genomic DNAsubtype: AD12316L,27I,41T,83L,91N,96I,116A,120S,148V,180D
MW006080275027Uganda01-Oct-2008genomic DNAsubtype: AD12316A,11I,12Y,15L,27I,41T,83L,91N,92P,115M,116A,120G,123S,148V,178T,208G,225S
MW006081275031Uganda05-Jun-2009genomic DNAsubtype: D12316L,15L,27I,83L,110S,116A,120S,148V,180D,208G,225S

Database

Resources

Team