Genbank References: capsid (p24)

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Genbank References: capsid (p24)

Authors	Title	Citation	E-value	# in Gb	#Pts	ART	Source	Cloning	StudyType
Smolen (2016)	HIV type 1 genetic diversity in Silesia, Poland: a retrospective analysis	AIDS Res. Hum. Retroviruses 26 (7), 767-776 (2010)	2.02e-167	78	101	Mixed	PBMC	Direct PCR	Molecular epidemiology

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Accession	IsolateName	Country	Coll Date	MolType	Source	Note	FirstAA	LastAA	MutList
EU910677	ABF969g	Poland	2003	genomic DNA	PBMC of intravenous drug user	subtype: B	13	219	15L,69LV,87Q,92P,96I,110N,116T
EU910703	AH1881g	Poland	2001	genomic DNA	PBMC of intravenous drug user	subtype: B	9	218	15L,83L,91V,107V,132K,136M,148S
EU910720	AJF2771g	Poland	2001	genomic DNA	PBMC of intravenous drug user	subtype: B	14	216	83T,107V,128D,132K,136M,160S
EU910695	AJH2120g	Poland	2001	genomic DNA	PBMC of homosexual	subtype: B	14	223
EU910721	AM1473g	Poland	2001	genomic DNA	PBMC of intravenous drug user	subtype: B	12	216	15L,83L,107V,132K,136M,154K
EU910731	AR2716g	Poland	2002	genomic DNA	PBMC of heterosexual	subtype: B	8	218	83L
EU910675	ASR1364g	Poland	2001	genomic DNA	PBMC of intravenous drug user	subtype: B	16	217	116D,120R
EU910732	AZ3735g	Poland	2004	genomic DNA	PBMC of heterosexual	subtype: B	8	231	83L,136M
EU910663	BAR611g	Poland	2000	genomic DNA	PBMC of intravenous drug user	subtype: B	8	219	83L
EU910729	BHK564g	Poland	2002	genomic DNA	PBMC of heterosexual	subtype: B	14	215	83L,194S
EU910667	BRJ963g	Poland	2001	genomic DNA	PBMC of intravenous drug user	subtype: B	8	231	14P,15L,41T,83L,120H,208G
EU910690	BT2126g	Poland	2001	genomic DNA	PBMC of intravenous drug user	subtype: B	8	218	178T
EU910666	BTJ1910g	Poland	2001	genomic DNA	PBMC of heterosexual	subtype: B	10	216	116A,194S
EU910657	CBJ8g	Poland	2000	genomic DNA	PBMC of intravenous drug user	subtype: B	16	216	83L,120H,136M
EU910713	CJS1350g	Poland	2001	genomic DNA	PBMC of heterosexual	subtype: B	13	218	41A,68I,83L,91A,120S,132K,136M,216A
EU910728	DD690g	Poland	2003	genomic DNA	PBMC of intravenous drug user	subtype: B	16	216	83L,208G
EU910712	DK1169g	Poland	2001	genomic DNA	PBMC of intravenous drug user	subtype: B	15	216	83L,91V,120S,136M,183H
EU910641	DT2624g	Poland	2003	genomic DNA	PBMC of intravenous drug user	subtype: B	14	231	15L,83L,120H,208G
EU910702	EBW2626g	Poland	2001	genomic DNA	PBMC of heterosexual	subtype: B	14	215	14T,15M,27I,71D,83L,91IV,116A,120H,154K,199R,208G
EU910725	EP1897g	Poland	2001	genomic DNA	PBMC of intravenous drug user	subtype: B	16	216	83L,107V,132K,136M
EU910681	ERS552g	Poland	2001	genomic DNA	PBMC of intravenous drug user	subtype: B	13	218	83L,96I,116T,180D
EU910685	GAP1854g	Poland	2001	genomic DNA	PBMC of intravenous drug user	subtype: B	14	225	194S
EU910646	GJ3734g	Poland	2003	genomic DNA	PBMC of intravenous drug user	subtype: B	9	220	15L,83L,107V,132K,136M,208G,210S
EU910680	GSF1905g	Poland	2003	genomic DNA	PBMC of intravenous drug user	subtype: B	9	220	15L,116A,148I,180D
EU910658	HKP1039g	Poland	2000	genomic DNA	PBMC of intravenous drug user	subtype: B	11	218	15L,107S,116A,120S,191I
EU910688	JKS2556g	Poland	2001	genomic DNA	PBMC of homosexual	subtype: B	9	218	83L,91V,136I,194S,208G
EU910692	JM118g	Poland	2002	genomic DNA	PBMC of intravenous drug user	subtype: B	8	216
EU910704	JS1631g	Poland	2007	genomic DNA	PBMC of heterosexual	subtype: B	16	230	83L,194S,217X
EU910722	JS1858g	Poland	2001	genomic DNA	PBMC of homosexual	subtype: B	9	219	15L,41T,83L,136M,180D,194S
EU910689	JSM38g	Poland	2002	genomic DNA	PBMC of intravenous drug user	subtype: B	14	216	41A,68I,83L,91IV,120S,123A,132K,136M,180D
EU910638	KB17g	Poland	2003	genomic DNA	PBMC of intravenous drug user	subtype: B	16	216	27I,83L,87P,91M,136M,148I,154K
EU910717	KDG1963g	Poland	2001	genomic DNA	PBMC of intravenous drug user	subtype: B	14	215	15L,83L,107V,132K,136M,152E
EU910668	KMB117g	Poland	2001	genomic DNA	PBMC of intravenous drug user	subtype: B	9	218	83L
EU910662	KMH1081g	Poland	2003	genomic DNA	PBMC of intravenous drug user	subtype: B	15	216	44A,83L,163DN
EU910714	KMR2524g	Poland	2002	genomic DNA	PBMC of intravenous drug user	subtype: B	8	218	15L,83L,107V,132K,136M
EU910694	KP1624g	Poland	2002	genomic DNA	PBMC of intravenous drug user	subtype: B	10	218	15L,24EV,194S
EU910669	KPR1042g	Poland	2001	genomic DNA	PBMC of intravenous drug user	subtype: B	8	231	41A,120H,132K,136M
EU910645	KS2783g	Poland	2003	genomic DNA	PBMC of intravenous drug user	subtype: B	16	231	83L,107V,120S,132K,136I,148V,180D
EU910698	KTS207g	Poland	2001	genomic DNA	PBMC of intravenous drug user	subtype: B	16	226	27IV
EU910697	KWR2547g	Poland	2001	genomic DNA	PBMC of intravenous drug user	subtype: B	14	214	83L
EU910655	LIM515g	Poland	2000	genomic DNA	PBMC of intravenous drug user	subtype: B	8	231	71D,83L,87Q,91V,98D,107V,120S,129V,132K,136I,180D
EU910653	MAZ1706g	Poland	2000	genomic DNA	PBMC of intravenous drug user	subtype: B	8	231	10A,15L,83L,136M
EU910687	MBS15g	Poland	2001	genomic DNA	PBMC of intravenous drug user	subtype: B	8	231	96I,116T,209T
EU910649	MC3630g	Poland	2003	genomic DNA	PBMC of homosexual	subtype: B	16	231	27I,120H,128D
EU910671	MGD227g	Poland	2001	genomic DNA	PBMC of intravenous drug user	subtype: B	16	217
EU910683	MJA1552g	Poland	2001	genomic DNA	PBMC of intravenous drug user	subtype: B	8	231	83L,91N,120H,160S,199R
EU910684	MJS2135g	Poland	2001	genomic DNA	PBMC of intravenous drug user	subtype: B	14	217	83L,87Q,91V,96I,116A,120H,208G
EU910705	MKZ1583g	Poland	2001	genomic DNA	PBMC of intravenous drug user	subtype: B	13	215	27I,91V,148V
EU910718	ML2440g	Poland	2001	genomic DNA	PBMC of intravenous drug user	subtype: B	14	219
EU910636	MM125g	Poland	2003	genomic DNA	PBMC of intravenous drug user	subtype: B	8	231	23,80
EU910676	MMB2216g	Poland	2001	genomic DNA	PBMC of intravenous drug user	subtype: B	16	217	83L,87Q,91V,96I,110N,116A,120H,136M,148V
EU910647	MP3759g	Poland	2003	genomic DNA	PBMC of intravenous drug user	subtype: B	9	226	41T,120S,180D,199R
EU910637	NA639g	Poland	2003	genomic DNA	PBMC of intravenous drug user	subtype: B	15	231	28K,35K,46R,61E,75K,76K,79K,80,81N,82K,96I,97K,98K,100K,101E,116E,117,118I,127K,132K,137K,143K,152N,154K,159K,162K,163N,166N,184*,213D,214I,225N
EU910640	NH2351g	Poland	2003	genomic DNA	PBMC of intravenous drug user	subtype: B	13	220	83L,154K,170R,194S
EU910648	OG204g	Poland	2003	genomic DNA	PBMC of intravenous drug user	subtype: B	16	231	71D,83L,91V,177C,180D
EU910656	PDM761g	Poland	2002	genomic DNA	PBMC of intravenous drug user	subtype: B	10	218	75D,83L,178T
EU910719	PJB351g	Poland	2001	genomic DNA	PBMC of intravenous drug user	subtype: B	16	219	83L,91V
EU910661	PKJ1184g	Poland	2000	genomic DNA	PBMC of intravenous drug user	subtype: B	14	216	194S
EU910672	PLA2364g	Poland	2001	genomic DNA	PBMC of intravenous drug user	subtype: B	15	217	83L,91N,96L,116A,120H
EU910679	PP1751g	Poland	2001	genomic DNA	PBMC of homosexual	subtype: B	16	217	83L,91V,194S
EU910701	PP706g	Poland	2002	genomic DNA	PBMC of intravenous drug user	subtype: B	9	218	83L,120H
EU910708	PZ1244g	Poland	2003	genomic DNA	PBMC of intravenous drug user	subtype: B	13	216	83L,120H,160S
EU910642	PZ3739g	Poland	2003	genomic DNA	PBMC of heterosexual	subtype: B	17	230	83L,148V,194S
EU910644	RD3700g	Poland	2003	genomic DNA	PBMC of intravenous drug user	subtype: B	10	226	27I,41T,91V,120S,148V,178T,200H,225S
EU910643	RK1223g	Poland	2003	genomic DNA	PBMC of intravenous drug user	subtype: B	16	227	148I,180D
EU910696	SAD1131g	Poland	2001	genomic DNA	PBMC of intravenous drug user	subtype: B	9	218	15L,83L,107V,132K,136M
EU910670	SDJ2078g	Poland	2001	genomic DNA	PBMC of intravenous drug user	subtype: B	14	216	68I,83L,91V,180D
EU910724	SG2775g	Poland	2003	genomic DNA	PBMC of intravenous drug user	subtype: B	16	216	83L,194S
EU910652	SG3792g	Poland	2003	genomic DNA	PBMC of homosexual	subtype: B	14	231	27I,41T,71D,83L,87Q,120S,180D,194S,208G
EU910665	SJA2463g	Poland	2002	genomic DNA	PBMC of homosexual	subtype: B	16	231	27I,83L,116S,148V
EU910699	TK1074g	Poland	2001	genomic DNA	PBMC of intravenous drug user	subtype: B	9	217	107S,120NS
EU910727	TK1460g	Poland	2002	genomic DNA	PBMC of intravenous drug user	subtype: B	10	217	91V
EU910651	TM2607g	Poland	2003	genomic DNA	PBMC of intravenous drug user	subtype: B	12	231	15L,83L,107V,132K,136M,154K,194S
EU910673	UTK2497g	Poland	2002	genomic DNA	PBMC of homosexual	subtype: B	14	218	15L,120H
EU910733	WK156g	Poland	2004	genomic DNA	PBMC of intravenous drug user	subtype: B	8	231	15L,41T,83L,87Q,96I,110N,116A,154K
EU910700	WP2613g	Poland	2001	genomic DNA	PBMC of intravenous drug user	subtype: B	16	231	83L,91N,120H,160S
EU910664	WRL2332g	Poland	2000	genomic DNA	PBMC of intravenous drug user	subtype: B	15	218	41A,132K,136M
EU910650	WS1674g	Poland	2003	genomic DNA	PBMC of intravenous drug user	subtype: B	22	231	27I,83L,110N,116A,148V

Genbank References: capsid (p24)

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