<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Li (2012) Characteristics and Outcomes of Initial Virologic Suppressors during Analytic Treatment Interruption in a Therapeutic HIV-1 gag Vaccine Trial PLoS ONE 7 (3), E34134 (2012) 7.44e-169 63 11 ART Plasma Direct PCR Reservoir

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AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
JN685331ACTG 5197 PID 101379 time poinUSA26-Mar-2007genomic RNAplasma12316L,15L,27I,83L,120H,148V
JN685332ACTG 5197 PID 101846 time poinUSA14-Jun-2006genomic RNAplasma12316L,14PS,15L,16ST,83L,136LM,148IT
JN685333ACTG 5197 PID 111322 time poinUSA12-Mar-2008genomic RNAplasma12316L,41T,83LV,91P,148V,180D,191I,199R,209P,216S
JN685334ACTG 5197 PID 111557 time poinUSA22-Aug-2006genomic RNAplasma12316L,83L,115V,116A,136M,141V
JN685335ACTG 5197 PID 111728 time poinUSA15-Mar-2007genomic RNAplasma12316A,14S,83L,115V,116A,154K,180D,225AT,226HY,229K,230I
JN685336ACTG 5197 PID 112062 time poinUSA27-Jun-2007genomic RNAplasma12316L,14AP,41T,83T,120H,128DE,180D,199R,225GS
JN685317ACTG 5197 PID 11651 time pointUSA09-Jan-2007genomic RNAplasma12316IM,83L,91V,136M,194AS,225GS
JN685318ACTG 5197 PID 12944 time pointUSA28-Feb-2007genomic RNAplasma12316L,16T,83L,116A,128D,148V,177T,178T
JN685319ACTG 5197 PID 12984 time pointUSA14-Jun-2007genomic RNAplasma12316L,83L,86AV,87Q,91IV,96I,98D,116AT,136M
JN685320ACTG 5197 PID 14875 time pointUSA19-Dec-2006genomic RNAplasma12316L,41A,79D,83M,132K,136M
JN685337ACTG 5197 PID 161116 time poinUSA31-Oct-2007genomic RNAplasma12316L,15IL,41A,83L,110N,116A,132K,136M,154K,178T
JN685338ACTG 5197 PID 213028 time poinUSA02-Jan-2007genomic RNAplasma12316L,14P,17A,72A,83LV,120S,148V,180D
JN685339ACTG 5197 PID 220977 time poinUSA06-Jun-2006genomic RNAplasma123183L,91IV,136M
JN685340ACTG 5197 PID 220982 time poinUSA24-Jul-2006genomic RNAplasma123115IL,38PS,83L,136M,154K,194S
JN685341ACTG 5197 PID 231751 time poinUSA19-Sep-2007genomic RNAplasma12316L,18KR,83L,91N,92P,209C,213EK
JN685342ACTG 5197 PID 232708 time poinUSA19-Apr-2007genomic RNAplasma12316L,14P,15L,27I,41T,83L,86P,87Q,91V,98D,120S,148AT,180D,208G,210S,225S
JN685343ACTG 5197 PID 250183 time poinUSA01-Nov-2006genomic RNAplasma12316L,83L,87Q,91V,98D,154K,171I
JN685344ACTG 5197 PID 250289 time poinUSA20-Nov-2007genomic RNAplasma12316L,83LV,160PS
JN685345ACTG 5197 PID 250647 time poinUSA04-Jan-2007genomic RNAplasma123127I,83L,120H,128D,136M,148V,225S
JN685346ACTG 5197 PID 250760 time poinUSA29-Nov-2006genomic RNAplasma12316L,15L,27I,83L,116A,148V,178ST,208G
JN685347ACTG 5197 PID 250979 time poinUSA25-Apr-2006genomic RNAplasma123127I,83L,120H,128D,136I,148V,180D,225S
JN685348ACTG 5197 PID 251210 time poinUSA01-Aug-2006genomic RNAplasma12316M,83L,91V,136M,139H
JN685349ACTG 5197 PID 251333 time poinUSA31-May-2006genomic RNAplasma123183L,87HQ,91V,148A,208G
JN685350ACTG 5197 PID 251547 time poinUSA30-May-2006genomic RNAplasma12316L,15L,41ST,83L,87Q,91V,96L,116A,120H,136M,143KR,146CS,148I,208G,213D
JN685351ACTG 5197 PID 252348 time poinUSA18-Oct-2007genomic RNAplasma12316L,14P,15L,83L,120H,208G
JN685352ACTG 5197 PID 253134 time poinUSA21-May-2007genomic RNAplasma12316H,14P,16ST,31N,41T,96IM,116A,180D,210S
JN685353ACTG 5197 PID 253284 time poinUSA04-Jun-2007genomic RNAplasma12316L,83L,154K,178ST
JN685354ACTG 5197 PID 253517 time poinUSA09-Jan-2008genomic RNAplasma123115L,83L,87Q,96I,110N,116A,136M,148IT
JN685355ACTG 5197 PID 253518 time poinUSA24-Oct-2007genomic RNAplasma12316L,15L,27I,83L,110N,116A,136M,148V,178T,208G,225GS
JN685356ACTG 5197 PID 254061 time poinUSA02-May-2006genomic RNAplasma12316IV,68I,83L,120H,128D,180D,194S
JN685357ACTG 5197 PID 254076 time poinUSA20-Apr-2006genomic RNAplasma123115L,41T,96I,116T,154K,180D,205LM,208G,210S,225T,229K,230I
JN685358ACTG 5197 PID 282032 time poinUSA11-Dec-2006genomic RNAplasma12316L,83LV,154KR
JN685359ACTG 5197 PID 282225 time poinUSA16-May-2007genomic RNAplasma12316L,27I,83L,91V,98D,120S,148V,171V,180D
JN685360ACTG 5197 PID 291288 time poinUSA17-May-2007genomic RNAplasma12316L,15L,27I,83L,110S,116A,148I,208G
JN685361ACTG 5197 PID 291295 time poinUSA20-Feb-2007genomic RNAplasma12316L,14P,83L,120H,128D,136M,180D,194S
JN685362ACTG 5197 PID 321430 time poinUSA28-Feb-2008genomic RNAplasma12316L,14P,15M,17A,27I,68I,83L,110N,120H,128D,148V,180D
JN685363ACTG 5197 PID 321455 time poinUSA31-Oct-2006genomic RNAplasma12316L,14P,15L,41T,83L,91V,110N,116A,120S,180D,210S
JN685364ACTG 5197 PID 321531 time poinUSA30-Nov-2006genomic RNAplasma12316L,83L,115V,116A,120A,123A,170R,225S
JN685365ACTG 5197 PID 321741 time poinUSA12-Sep-2006genomic RNAplasma12316L,14P,15L,83L,120H,178T,207T,208G
JN685366ACTG 5197 PID 373794 time poinUSA26-Sep-2006genomic RNAplasma123183L,136M,194S,225GS
JN685367ACTG 5197 PID 381574 time poinUSA11-Dec-2006genomic RNAplasma12316L,83L,96IM,116A,194S,230I
JN685368ACTG 5197 PID 381614 time poinUSA31-Oct-2006genomic RNAplasma12316M,14P,79D,83L,91IV,120H,154K,171I
JN685369ACTG 5197 PID 381616 time poinUSA21-Nov-2006genomic RNAplasma12316L,14P,15IL,44AS,83L,110N,120H,154K,178T
JN685370ACTG 5197 PID 381624 time poinUSA20-Dec-2006genomic RNAplasma12316M,14AP,15L,16ST,27I,83L,91V,110N,116A,148V,178ST
JN685371ACTG 5197 PID 381628 time poinUSA28-Dec-2006genomic RNAplasma123183L,148A,225S
JN685372ACTG 5197 PID 381629 time poinUSA07-Feb-2007genomic RNAplasma123127I,83L,87P,91V,120NS,148V
JN685321ACTG 5197 PID 44702 time pointUSA03-Jul-2007genomic RNAplasma12316L,44AS,45DE,83L,148V,180D,230I
JN685322ACTG 5197 PID 44923 time pointUSA17-Jul-2007genomic RNAplasma12316L,15L,41T,83L,87Q,91V,96I,110N,116A,120H,154K,180D,208G
JN685323ACTG 5197 PID 44924 time pointUSA28-Mar-2007genomic RNAplasma12316L,14P,15IL,27I,41ST,83M,96IM,116A,120HN,124V,146CRS,148AST,154K,171V,180D,225S
JN685373ACTG 5197 PID 461607 time poinUSA27-Apr-2007genomic RNAplasma12316M,83L,154K,178T
JN685374ACTG 5197 PID 461609 time poinUSA16-May-2007genomic RNAplasma12316M,14P,41T,83L,135V,136M,154K,171V,180D
JN685324ACTG 5197 PID 51079 time pointUSA07-Jun-2006genomic RNAplasma12316L,14P,44A,83L,110N,180D
JN685375ACTG 5197 PID 520438 time poinUSA10-Jan-2007genomic RNAplasma123127IV,83L,116N,148A,208G
JN685376ACTG 5197 PID 540321 time poinUSA07-Nov-2006genomic RNAplasma12316L,14P,15L,31N,41T,59I,83L,110S,116A,120S,148I,180D
JN685377ACTG 5197 PID 541009 time poinUSA15-Nov-2006genomic RNAplasma12316M,14P,83L,116A,178ST
JN685378ACTG 5197 PID 541414 time poinUSA18-Jun-2007genomic RNAplasma12316L,15L,41T,83L,148V,152E,180D
JN685379ACTG 5197 PID 541421 time poinUSA09-Apr-2007genomic RNAplasma12316L,14PS,15L,27I,36IV,41ST,71D,83L,87Q,96I,110N,116A,120R,128D,148V,160PS,177C,178T,180D,225S
JN685325ACTG 5197 PID 60885 time pointUSA15-Jan-2007genomic RNAplasma123183L,86P,87Q,96I,116T,208AG
JN685326ACTG 5197 PID 72588 time pointUSA30-May-2007genomic RNAplasma12316L,14P,15L,79D,83L,154K,160S
JN685327ACTG 5197 PID 72909 time pointUSA14-Nov-2006genomic RNAplasma12316L,15L,83M,160S,208G,225S
JN685328ACTG 5197 PID 73057 time pointUSA07-Jan-2008genomic RNAplasma12316L,27I,83L,91A,110N,116A,120NS,148V,178T,225GS,230I
JN685329ACTG 5197 PID 83352 time pointUSA10-Aug-2006genomic RNAplasma12316L,14P,41T,83L,86P,87Q,96I,116T,180D,208G,210S
JN685330ACTG 5197 PID 83353 time pointUSA19-Sep-2006genomic RNAplasma12316L,27I,83L,87P,91V,120S,148V,171V,180D

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