<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Currier (2006) CTL epitope distribution patterns in the Gag and Nef proteins of HIV-1 from subtype A infected subjects in Kenya: use of multiple peptide sets increases the detectable breadth of the CTL response BMC Immunol. 7, 8 (2006) 2.54e-163 36 36 Naive PBMC Molecular clones HLA

Download sequences

AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
DQ367262KNH1018Kenyagenomic DNAbloodsubtype: A112316A,9H,10P,11M,14P,15L,27I,31G,33N,54M,58I,71D,83I,91V,92P,111IT,120S,124V,148V,154K,169F,178T,183G,200S,203R,207T,208G,210S,225A
DQ367263KNH1028Kenyagenomic DNAbloodsubtype: A112312V,6A,14N,15L,27I,54M,58I,68I,71D,79D,83L,92P,96I,111P,115L,116Q,120S,148V,154K,169F,170R,183G,200S,203R,207S,208G
DQ367264KNH1029Kenyagenomic DNAbloodsubtype: A112316V,11I,14P,15V,27I,31G,48I,54M,58I,71D,83L,92P,93A,96L,110N,111T,120S,128D,148V,154K,169F,171V,178T,183G,203R,207S,208G,210S,225S
DQ367265KNH1118Kenyagenomic DNAbloodsubtype: A112316A,11M,14P,15L,27I,31G,33N,54M,58I,71D,83L,92P,111P,120S,128D,148V,154K,169F,178T,183G,191I,203R,207T,208G
DQ367266KNH1119Kenyagenomic DNAbloodsubtype: A112316A,11I,14S,15L,27I,54M,58I,71D,83L,92P,111P,120S,128D,148V,154K,169F,178T,183G,200S,203R,208G
DQ367267KNH1225Kenyagenomic DNAbloodsubtype: A1D12312V,6A,11I,14S,15L,27I,54M,58I,71D,83L,86A,92P,111P,120S,128D,148V,154K,169F,171A,178T,180D,200S,207T,208G,225S
DQ367268KNH1226Kenyagenomic DNAbloodsubtype: A112316A,15V,27I,30R,54M,58I,71D,83L,92P,111P,120S,128D,148V,154K,169F,171C,180D,183G,187D,188A,200S,203R,204G,207S,208G,225S
DQ367269KNH1233Kenyagenomic DNAbloodsubtype: A112316A,10P,11I,14S,15L,27I,31G,48I,54M,58I,71D,83L,92P,111P,128D,148V,154K,169F,178T,180D,200S,203R,207S,208G,225A
DQ367261KNH1234Kenyagenomic DNAbloodsubtype: A212316A,11I,14S,15L,23*,27I,31G,41T,58I,71D,80*,83L,87Q,92P,96L,111P,115V,117*,120G,128D,148V,156R,169F,178T,183G,184*,200S,203R,207A,208G,229K
DQ367270KNH1235Kenyagenomic DNAbloodsubtype: A112316A,11I,12Y,14S,15M,27I,54M,58I,71D,79D,83L,111T,116A,120G,128D,148V,154K,169F,178T,183G,200S,203R,208G,210S
DQ367271KNH1236Kenyagenomic DNAbloodsubtype: A112316A,11I,14S,15L,27I,54M,58I,71D,83L,92P,111P,120G,128D,148V,154K,169F,171A,178T,180D,183G,200S,203R,207T,208G
DQ367272KNH1237Kenyagenomic DNAbloodsubtype: A112316A,11T,14S,15L,26A,27I,36I,41L,54M,58I,71D,83L,92P,111P,116A,118I,120S,128D,132K,148V,154K,169F,171C,180D,200S,203R,207A,208G
DQ367273KNH1240Kenyagenomic DNAbloodsubtype: A112316A,11I,14S,15L,27I,54M,58I,71D,83L,92P,111P,120S,128D,148V,154K,169F,178T,183G,200S,203R,207A,208G
DQ367274KNH1241Kenyagenomic DNAbloodsubtype: A112316A,11I,15V,27I,54M,58I,71D,83L,92P,94S,102G,111P,120S,128D,148V,154K,169F,178T,180D,203R,208Q
DQ367275KNH1242Kenyagenomic DNAbloodsubtype: A112316A,11I,16T,27I,30R,31G,50G,54M,58I,71D,83L,87Q,92P,96L,111P,128D,148V,154K,169F,178T,183G,200S,203R,207S,208G,225S
DQ367276KNH1243Kenyagenomic DNAbloodsubtype: A1D12316A,14N,15L,27I,47S,54L,58I,83L,87P,116T,120S,148V,179*PQS,180D,183H,225S
DQ367277KNH1246Kenyagenomic DNAbloodsubtype: A112316A,11I,15V,27I,54M,58I,71D,83T,87Q,92P,96L,101E,111V,115M,117*,120S,128D,148V,154K,166N,169F,171A,178T,183G,200S,203R,208G
DQ367278KNH1247Kenyagenomic DNAbloodsubtype: A112316A,10L,11I,14N,15L,27I,54M,58I,71D,83L,92P,111P,120S,128D,132K,148V,169F,180D,190M,191I,200S,203R,207A,208G,230I
DQ367279KNH1255Kenyagenomic DNAbloodsubtype: A1D12316A,11I,14P,15F,27I,29D,31G,48I,54M,58I,71D,83L,92P,111T,116A,120NS,128D,132K,136M,139H,148V,154K,169F,178T,200S,203R,208G,225A,226Y
DQ367280KNH1256Kenyagenomic DNAbloodsubtype: A112312T,6A,8R,14S,15L,23*,27I,41T,54M,58I,71D,80*,83L,91V,92V,111P,120G,128D,148V,153V,154E,169F,171I,180D,183G,200S,203R,207S,208G,225R
DQ367281KNH1263Kenyagenomic DNAbloodsubtype: A112312V,6A,11I,14S,15L,27I,30R,31G,54M,58I,71D,79D,83L,92P,111P,128D,148V,154K,169F,183G,200S,203R,207S,208G
DQ367282KNH1272Kenyagenomic DNAbloodsubtype: A112316A,11I,14P,15L,27I,30R,31G,48I,54M,58I,71D,83L,92P,111P,128D,148V,154K,167K,169F,178T,183G,187D,200S,203R,208G
DQ367283KNH1273Kenyagenomic DNAbloodsubtype: A112316A,10W,11T,14T,15L,27I,54M,58I,71D,83L,92P,111P,116A,120G,124V,128D,148V,154K,169F,178T,180D,200A,203R,207A,208G
DQ367284KNH1274Kenyagenomic DNAbloodsubtype: A112316A,11I,14S,15L,27I,29D,54M,58I,71D,83L,86A,87Q,91V,98D,111P,120G,128D,131R,148V,154K,169F,178T,180D,200S,203R,207A,208G
DQ367285KNH1279Kenyagenomic DNAbloodsubtype: D12312L,6L,12Y,14T,15M,27I,41T,83L,91A,110N,116A,120S,132K,136M,138F,148V,180D,225S
DQ367286KNH1280Kenyagenomic DNAbloodsubtype: A112316A,10P,11I,14T,15L,28K,29K,31G,54M,58I,83L,92P,96I,111P,120S,128D,133*,148V,154K,169F,171V,178T,180D,200S,203R,207T,208G
DQ367287KNH1282Kenyagenomic DNAbloodsubtype: A112316A,11T,14S,15L,27I,54M,58I,71D,83L,92P,111P,120G,128D,148V,154K,169F,178T,183G,200S,203R,207T,208G
DQ367288KNH1283Kenyagenomic DNAbloodsubtype: A112316A,14N,15L,27I,54M,58I,83L,92P,111P,116A,120G,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
DQ367289KNH1291Kenyagenomic DNAbloodsubtype: A112316A,11I,14N,15L,27I,54M,58I,71D,83IV,92P,96I,111P,115L,116Q,120G,148V,149G,153V,154K,169F,171V,178T,183G,200S,203R,207S,208G
DQ367290KNH1297Kenyagenomic DNAbloodsubtype: A112312V,6A,14T,15F,27I,29D,31G,54M,58I,71D,83L,92P,111P,120G,128D,148V,154K,169F,178T,200S,203R,208G
DQ367291KNH1298Kenyagenomic DNAbloodsubtype: A1D12316L,15L,27I,41T,83L,87Q,91V,96L,110N,120S,148V,178T,203R
DQ367292KNH1300Kenyagenomic DNAbloodsubtype: A112316A,11IV,12L,14T,15L,27I,54M,58I,68I,71D,79D,83L,92P,96I,111P,115L,116Q,120G,128D,148V,154K,169F,178T,200S,203R,207T,208G
DQ367293KNH1314Kenyagenomic DNAbloodsubtype: A1C12312V,6A,11I,15V,27I,50G,54M,58I,71D,83L,92P,111T,120G,128D,131R,148V,154K,169F,178T,187D,191I,203R,208G,213K
DQ367294KSM4039Kenyagenomic DNAbloodsubtype: A1D12316A,11I,14N,15L,27I,54M,58I,71D,83L,91IV,92P,111P,120S,128D,148V,154K,169F,178T,180D,200S,203R,207A,208G,210S,225S
DQ367295KSM4043Kenyagenomic DNAbloodsubtype: A112316A,12L,14T,15L,27I,54M,58I,71D,83L,92P,96I,111P,115L,116A,120S,128D,148V,154K,169F,171V,178T,180D,200N,203R,207T,208G
DQ367296KSM4048Kenyagenomic DNAbloodsubtype: A112316A,11T,14P,15L,48I,50H,54M,58V,71D,83L,92P,111P,118IM,119AT,120S,128D,131R,138F,139H,141L,148V,154K,169F,178T,180D,200S,203R,208G,225S

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