<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Eyzaguirre (2013) Elevated hypermutation levels in HIV-1 natural viral suppressors Virology 443 (2), 306-312 (2013) 5.29e-156 46 46 Naive PBMC SGS Reservoir

Download sequences

AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
JF68985205US.SAJ.NVS12USA2005genomic DNAsubtype: B12316L,15L,41T,83L,154K,194S
JF68985305US.SAJ.NVS15USA2005genomic DNAhypermutated;subtype: B12316M,41T,50S,83L,91A,120S,133*,137R,148V
JF68985405US.SAJ.NVS16USA2005genomic DNAsubtype: B12316L,14P,15L,27I,83L,112R,116D,154K,225S
JF68985505US.SAJ.NVS19USA2005genomic DNAhypermutated;subtype: B12316L,8R,10I,23*,60R,71K,80*,82K,91V,96I,100K,116R,117*,127R,133*,156R,162K,167Q,180D,184*,222R
JF68985605US.SAJ.NVS3USA2005genomic DNAsubtype: B12316L,36T,83L,87Q,91V,120S,154K,170R,180D,203R,208G,225S,230I
JF68985705US.SAJ.NVS5USA2005genomic DNAsubtype: B12316L,83L,180D,225S
JF68985805US.SAJ.NVS7USA2005genomic DNAhypermutated;subtype: B123110I,23*,80*,83L,89R,91V,100K,116R,117*,133*,136I,143K,156R,167Q,184*,206R,209C
JF68985905US.SAJ.NVS8USA2005genomic DNAsubtype: B12316L
JF68986005US.SAJ.NVS9USA2005genomic DNAsubtype: B12316L,14P,41T,83T,87Q,96I,110N,183G,208G
JF68986106US.SAJ.C164.MSUSA2006genomic DNAhypermutated;subtype: B12316L,14V,15L,27I,29D,31N,36I,41T,80*,83L,87Q,91V,96L,110N,116A,117*,120H,148V,154K,180D,210S,225S
JF68986206US.SAJ.C164.SCUSA2006genomic DNAsubtype: B123114P,15L,27I,83L,91V,116A,128D,148V,154K,178T
JF68986306US.SAJ.C165.TJUSA2006genomic DNAsubtype: B12316L,27I,41T,83L,86A,87Q,91V,96V,116A,120S,148V,154K,180D,209C
JF68986406US.SAJ.C166.SGUSA2006genomic DNAsubtype: B12316L,83L,136M,210S
JF68986506US.SAJ.C167.LHUSA2006genomic DNAsubtype: B12316L,27I,41T,83T,154K,178T,194S
JF68986606US.SAJ.C168.LSUSA2006genomic DNAsubtype: B12316L,41T,115V,120S,180D,205M,208G,210S
JF68986706US.SAJ.C169.JSUSA2006genomic DNAsubtype: B12316L,14P,37M,41T,83L,116A,120H,124V,154K,180D,194S
JF68986806US.SAJ.C170.JPUSA2006genomic DNAsubtype: B12316L,15L,83L,183A,208G,225S,230I
JF68986906US.SAJ.NVS20USA2006genomic DNAhypermutated;subtype: B123110I,23*,61R,80*,83L,89R,116R,117*,133*,154K,178T,194S,222R,230I
JF68987006US.SAJ.NVS22USA2006genomic DNAsubtype: B12316V,14S,50S,83L,154K,194S
JF68987106US.SAJ.NVS23USA2006genomic DNAsubtype: B12316L,14P,15L,41T,96R,116D,120S,180D,199R
JF68987206US.SAJ.NVS27USA2006genomic DNAsubtype: B123183L,154K,177C,178T,194S,208T
JF68987306US.SAJ.NVS31USA2006genomic DNAsubtype: B123150S,83L,128D
JF68987406US.SAJ.NVS32USA2006genomic DNAsubtype: B12316M,50S,83L,86A,87Q,91V,96V,116T,120H,141V,154K,209C
JF68987506US.SAJ.NVS35USA2006genomic DNAsubtype: B12316M,41T,154K,180D,194S
JF68987606US.SAJ.NVS39USA2006genomic DNAsubtype: B123114P,16T,83L,116D,136M,154K,194S
JF68987707US.SAJ.C154USA2007genomic DNAsubtype: B12316L,27I,36I,83L,120H,128D,148V,178T
JF68987807US.SAJ.C155USA2007genomic DNAhypermutated;subtype: B12316L,80*,83L,100K,117*,154K,229K
JF68987907US.SAJ.C156USA2007genomic DNAsubtype: B12316L,27I,41T,83L,91V,120S,154K,177C,178T,180D,194S,208G,225S
JF68988007US.SAJ.C157USA2007genomic DNAhypermutated;subtype: B12316M,14P,15L,16T,23*,41T,61R,75D,80*,83M,100K,101R,110N,120S,137R,154K,156R,220E,225A
JF68988107US.SAJ.C158USA2007genomic DNAhypermutated;subtype: B12316L,8R,23*,27I,36I,80*,83L,88T,91V,100K,116A,117*,127R,128D,148V,184*,206S,220E
JF68988207US.SAJ.C159USA2007genomic DNAhypermutated;subtype: B12316L,27I,36I,76K,82K,83L,91V,100K,116A,118I,128D,132K,148V,156E,187K,225E
JF68988307US.SAJ.C161.H1USA2007genomic DNAsubtype: B12316L,14P,41A,83M,132K,136M
JF68988407US.SAJ.C162.H2USA2007genomic DNAsubtype: B12316L,27IV,41T,83T,154K,178T,194S
JF68988507US.SAJ.C163.H3USA2007genomic DNAsubtype: B123114P,15L,83L,120H,148S,154K,225S
JF68988607US.SAJ.C166.MSUSA2007genomic DNAsubtype: B12316L,15L,41T,83L,96L,110S,116A,120H,148V,180D,187D,191T
JF68988707US.SAJ.C200USA2007genomic DNAsubtype: B12316L,14P,27I,41T,83ILM,87Q,120S,208G
JF68988807US.SAJ.NVS40USA2007genomic DNAhypermutated;subtype: B12316L,15L,23*,41T,71K,80*,83L,116R,117*,128K,133*,154K,173K,184*,194S,206S
JF68988907US.SAJ.NVS42USA2007genomic DNAsubtype: B12316M,14P,15L,16T,31S,41T,83L,110N,120G,154K,203R,225S
JF68989007US.SAJ.NVS48USA2007genomic DNAsubtype: B123171D,83L,120H,154K,180D
JF68989107US.SAJ.NVS53USA2007genomic DNAhypermutated;subtype: B123110I,14P,15L,23*,41T,60K,80*,83L,96I,110N,116A,117*,133*,137R,143K,154K,167Q,184*,194S,206R,220R,222R,229K
JF68989207US.SAJ.NVS54USA2007genomic DNAsubtype: B12316M,11I,31S,44A,50H,83L,91V,115V,116A,120S,125Q,154K,183G,208T
JF68989307US.SAJ.NVS55USA2007genomic DNAsubtype: B123183L,136M,154K
JF68989408US.SAJ.C202USA2008genomic DNAsubtype: B12316A,9A,41T,83L,87Q,91V,96I,116A,120H,148V,154K,178T,180D,203R
JF68989508US.SAJ.C203USA2008genomic DNAsubtype: B12316L,83M,91V,96L,120S,154K,180D
JF68989608US.SAJ.C204USA2008genomic DNAsubtype: B12316A,16T,27I,45D,54S,58I,71D,83M,96L,110S,116A,154K,180D,194S
JF68989708US.SAJ.C205USA2008genomic DNAsubtype: B12316L,91V,107S,120S

Database

Resources

Team