<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
de Goede (2013) HIV-1 evolution in patients undergoing immunotherapy with Tat, Rev and Nef expressing dendritic cells followed by treatment interruption AIDS. 2013 Nov 13;27(17):2679-89 6.07e-156 32 17 Naive Plasma Direct PCR Reservoir

Download sequences

AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
KF301679DC-TRN_A-1_20-May-2008Belgium20-May-2008genomic RNAplasma from patient in immunotherapyclinical trial (DC-TRN) with autologous DC-based vaccinefor HIV-2023183L,91V,180D
KF301691DC-TRN_A-1+2_08-May-2007Belgium08-May-2007genomic RNAplasma from patient in immunotherapyclinical trial (DC-TRN) with autologous DC-based vaccinefor HIV-3123183L,91V,180D
KF301694DC-TRN_A-1+2_11-Sep-2007Belgium11-Sep-2007genomic RNAplasma from patient in immunotherapyclinical trial (DC-TRN) with autologous DC-based vaccinefor HIV-2423183L,91V,180D
KF301693DC-TRN_A-1+2_12-Jun-2007Belgium12-Jun-2007genomic RNAplasma from patient in immunotherapyclinical trial (DC-TRN) with autologous DC-based vaccinefor HIV-2423183L,91V,180D
KF301690DC-TRN_A-1+2_14-Nov-2001Belgium14-Nov-2001genomic RNAplasma from patient in immunotherapyclinical trial (DC-TRN) with autologous DC-based vaccinefor HIV-2423183L,91V,180D
KF301692DC-TRN_A-1+2_22-May-2007Belgium22-May-2007genomic RNAplasma from patient in immunotherapyclinical trial (DC-TRN) with autologous DC-based vaccinefor HIV-2423183L,91V,180D
KF301697DC-TRN_B-1+2_04-Oct-2007Netherlands04-Oct-2007genomic RNAplasma from patient in immunotherapyclinical trial (DC-TRN) with autologous DC-based vaccinefor HIV-2523183L,136M,180D
KF301695DC-TRN_B-1+2_19-Mar-1997Netherlands19-Mar-1997genomic RNAplasma from patient in immunotherapyclinical trial (DC-TRN) with autologous DC-based vaccinefor HIV-2423183L,136M,180D
KF301696DC-TRN_B-1+2_27-Jun-2007Netherlands27-Jun-2007genomic RNAplasma from patient in immunotherapyclinical trial (DC-TRN) with autologous DC-based vaccinefor HIV-2423183L,148A,225S
KF301700DC-TRN_C-1+2_03-Sep-2007Netherlands03-Sep-2007genomic RNAplasma from patient in immunotherapyclinical trial (DC-TRN) with autologous DC-based vaccinefor HIV-2523131N,41T,83L,86A,87Q,91V,96I,98DE,116A,120S,200H,225S
KF301699DC-TRN_C-1+2_04-Jul-2007Netherlands04-Jul-2007genomic RNAplasma from patient in immunotherapyclinical trial (DC-TRN) with autologous DC-based vaccinefor HIV-2423131N,41T,83L,86A,87Q,91V,96I,98D,116A,120S,200H,225S
KF301698DC-TRN_C-1+2_21-Nov-2000Netherlands21-Nov-2000genomic RNAplasma from patient in immunotherapyclinical trial (DC-TRN) with autologous DC-based vaccinefor HIV-2423131N,41T,83L,86A,87Q,91V,96I,116A,120S,200H,225S
KF301701DC-TRN_D-1+2_13-Jan-1997Netherlands13-Jan-1997genomic RNAplasma from patient in immunotherapyclinical trial (DC-TRN) with autologous DC-based vaccinefor HIV-2523183L,136I,170R
KF301703DC-TRN_E-1+2_01-Aug-2007Netherlands01-Aug-2007genomic RNAplasma from patient in immunotherapyclinical trial (DC-TRN) with autologous DC-based vaccinefor HIV-2023183L,120H,208G
KF301702DC-TRN_E-1+2_30-Jul-1996Netherlands30-Jul-1996genomic RNAplasma from patient in immunotherapyclinical trial (DC-TRN) with autologous DC-based vaccinefor HIV-2023183L,120H,208G
KF301704DC-TRN_F-1+2_23-Oct-2001Netherlands23-Oct-2001genomic RNAplasma from patient in immunotherapyclinical trial (DC-TRN) with autologous DC-based vaccinefor HIV-2423183L,120H,208G
KF301705DC-TRN_F-1+2_29-Aug-2007Netherlands29-Aug-2007genomic RNAplasma from patient in immunotherapyclinical trial (DC-TRN) with autologous DC-based vaccinefor HIV-2523183L,120H,208G
KF301707DC-TRN_G-1+2_12-Sep-2007Netherlands12-Sep-2007genomic RNAplasma from patient in immunotherapyclinical trial (DC-TRN) with autologous DC-based vaccinefor HIV-2423183L,120H,148V
KF301706DC-TRN_G-1+2_14-Jan-1998Netherlands14-Jan-1998genomic RNAplasma from patient in immunotherapyclinical trial (DC-TRN) with autologous DC-based vaccinefor HIV-2423183L,120H,148V
KF301681DC-TRN_H-1_29-Oct-2007Netherlands29-Oct-2007genomic RNAplasma from patient in immunotherapyclinical trial (DC-TRN) with autologous DC-based vaccinefor HIV-2023141T,83L,110N,116A,154K,208G
KF301708DC-TRN_H-1+2_03-Feb-2000Netherlands03-Feb-2000genomic RNAplasma from patient in immunotherapyclinical trial (DC-TRN) with autologous DC-based vaccinefor HIV-2123141T,83L,110N,116A,154K,208G
KF301710DC-TRN_I-1+2_09-Sep-2007Belgium09-Sep-2007genomic RNAplasma from patient in immunotherapyclinical trial (DC-TRN) with autologous DC-based vaccinefor HIV-2423179D,83L,87Q,91V,110N,116A,120H,136I,139Q,141V,148I
KF301713DC-TRN_J-1+2_02-Sep-2007Belgium02-Sep-2007genomic RNAplasma from patient in immunotherapyclinical trial (DC-TRN) with autologous DC-based vaccinefor HIV-2423183L,229K
KF301712DC-TRN_J-1+2_21-Aug-2007Belgium21-Aug-2007genomic RNAplasma from patient in immunotherapyclinical trial (DC-TRN) with autologous DC-based vaccinefor HIV-2423183L,229K
KF301711DC-TRN_J-1+2_29-Mar-2001Belgium29-Mar-2001genomic RNAplasma from patient in immunotherapyclinical trial (DC-TRN) with autologous DC-based vaccinefor HIV-2523183L,229K
KF301683DC-TRN_K-1_04-Feb-2002Belgium04-Feb-2002genomic RNAplasma from patient in immunotherapyclinical trial (DC-TRN) with autologous DC-based vaccinefor HIV-2523183L,148V,170R,178T,225S
KF301714DC-TRN_L-1+2_10-Sep-2007Belgium10-Sep-2007genomic RNAplasma from patient in immunotherapyclinical trial (DC-TRN) with autologous DC-based vaccinefor HIV-2423158A,75D,83M,91A,120S,128D,154K,180D,208G
KF301715DC-TRN_L-1+2_24-Sep-2007Belgium24-Sep-2007genomic RNAplasma from patient in immunotherapyclinical trial (DC-TRN) with autologous DC-based vaccinefor HIV-2423158A,75D,83M,91A,120S,128D,154K,180D,208G
KF301684DC-TRN_M-1_23-Jan-2001Belgium23-Jan-2001genomic RNAplasma from patient in immunotherapyclinical trial (DC-TRN) with autologous DC-based vaccinefor HIV-2523183L,148V,178T,225S
KF301685DC-TRN_N-1_12-Dec-2007Netherlands12-Dec-2007genomic RNAplasma from patient in immunotherapyclinical trial (DC-TRN) with autologous DC-based vaccinefor HIV-2123123GW,31N,41T,59I,83L,87Q,96V,110N,116A,135X,136X,137X,138X,139X,140X,141X,142X,143X,144X,145X,146X,147X,148X,149X,150X,151X,152X,153X,154X,155X,156X,157X,158X,159X,160X,161X,162X,163X,164X,165X,166X,167X,168X,169X,170X,200H,208G
KF301688DC-TRN_P-1_11-Feb-2008Netherlands11-Feb-2008genomic RNAplasma from patient in immunotherapyclinical trial (DC-TRN) with autologous DC-based vaccinefor HIV-2023183L,137X,138X,139X,140X,141X,142X,143X,144X,145X,146X,147X,148X,149X,150X,151X,152X,153X,154X,155X,156X,157X,158X,159X,160X,161X,162X,163X,164X,165X,166X,167X,168X,169X,170X,171X,172X,173X,174X,175X,176X
KF301716DC-TRN_Q-1+2_15-Apr-2004Netherlands15-Apr-2004genomic RNAplasma from patient in immunotherapyclinical trial (DC-TRN) with autologous DC-based vaccinefor HIV-2423183L,154K,180D

Database

Resources

Team