Genbank References: capsid (p24)

Authors	Title	Citation	E-value	# in Gb	#Pts	ART	Source	Cloning	StudyType
Song (2018)	Tracking HIV-1 recombination to resolve its contribution to HIV-1 evolution in natural infection	Nat Commun (2018) In press	2.22e-162	722	10	Naive	Plasma	SGS	Acute infection

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Accession	IsolateName	Country	Coll Date	Clone	MolType	Source	Note	FirstAA	LastAA	MutList
MF499380	700010654.5.d0015.ipe026.5A1	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499381	700010654.5.d0015.ipe026.5A10	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499382	700010654.5.d0015.ipe026.5A11	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499383	700010654.5.d0015.ipe026.5A111	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499384	700010654.5.d0015.ipe026.5A12	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499385	700010654.5.d0015.ipe026.5A13	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499386	700010654.5.d0015.ipe026.5A14	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499387	700010654.5.d0015.ipe026.5A2	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499388	700010654.5.d0015.ipe026.5A21	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499389	700010654.5.d0015.ipe026.5A22	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499390	700010654.5.d0015.ipe026.5A23	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499391	700010654.5.d0015.ipe026.5A24	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499392	700010654.5.d0015.ipe026.5A3	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499393	700010654.5.d0015.ipe026.5A4	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499394	700010654.5.d0015.ipe026.5A5	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499395	700010654.5.d0015.ipe026.5A6	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499396	700010654.5.d0015.ipe026.5A7	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499397	700010654.5.d0015.ipe026.5A8	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499398	700010654.5.d0015.ipe026.5A81	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499399	700010654.5.d0015.ipe026.5A9	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499400	700010654.5.d0015.ipe026.5B1	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499401	700010654.5.d0015.ipe026.5B10	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499402	700010654.5.d0015.ipe026.5B11	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499403	700010654.5.d0015.ipe026.5B111	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499404	700010654.5.d0015.ipe026.5B12	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499405	700010654.5.d0015.ipe026.5B121	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499406	700010654.5.d0015.ipe026.5B14	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499407	700010654.5.d0015.ipe026.5B15	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499408	700010654.5.d0015.ipe026.5B2	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499409	700010654.5.d0015.ipe026.5B21	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499410	700010654.5.d0015.ipe026.5B22	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499411	700010654.5.d0015.ipe026.5B31	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499412	700010654.5.d0015.ipe026.5B5_a	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499413	700010654.5.d0015.ipe026.5B6	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499414	700010654.5.d0015.ipe026.5B61	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499415	700010654.5.d0015.ipe026.5B7	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499416	700010654.5.d0015.ipe026.5B8	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499417	700010654.5.d0015.ipe026.5B9	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499418	700010654.5.d0015.ipe026.5B91	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499419	700010654.5.d0015.ipe026.5C1	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499420	700010654.5.d0015.ipe026.5C11	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499421	700010654.5.d0015.ipe026.5C12_	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499422	700010654.5.d0015.ipe026.5C2	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499423	700010654.5.d0015.ipe026.5C21	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499424	700010654.5.d0015.ipe026.5C3	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499425	700010654.5.d0015.ipe026.5C4	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499426	700010654.5.d0015.ipe026.5C41	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499427	700010654.5.d0015.ipe026.5C5	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499428	700010654.5.d0015.ipe026.5C6	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499429	700010654.5.d0015.ipe026.5C61	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499430	700010654.5.d0015.ipe026.5C8	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499431	700010654.5.d0015.ipe026.5C81	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499432	700010654.5.d0015.ipe026.5C9	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499433	700010654.5.d0015.ipe026.5D10	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499434	700010654.5.d0015.ipe026.5D11	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499435	700010654.5.d0015.ipe026.5D111	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499436	700010654.5.d0015.ipe026.5D12	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499437	700010654.5.d0015.ipe026.5D121	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499438	700010654.5.d0015.ipe026.5D122	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,113K,115V,116A,120S,148V,178T,208G,213D
MF499439	700010654.5.d0015.ipe026.5D2	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499440	700010654.5.d0015.ipe026.5D22	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499441	700010654.5.d0015.ipe026.5D3	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499442	700010654.5.d0015.ipe026.5D4	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499443	700010654.5.d0015.ipe026.5D41	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499444	700010654.5.d0015.ipe026.5D5	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499445	700010654.5.d0015.ipe026.5D6	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499446	700010654.5.d0015.ipe026.5D61	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499447	700010654.5.d0015.ipe026.5D7	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499448	700010654.5.d0015.ipe026.5D8	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499449	700010654.5.d0015.ipe026.5D9	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499450	700010654.5.d0015.ipe026.5E1	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499451	700010654.5.d0015.ipe026.5E10	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499452	700010654.5.d0015.ipe026.5E11	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499453	700010654.5.d0015.ipe026.5E16	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499454	700010654.5.d0015.ipe026.5E19	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499455	700010654.5.d0015.ipe026.5E2	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,43V,83L,115V,116A,120S,148V,178T,208G,213D
MF499456	700010654.5.d0015.ipe026.5E21	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499457	700010654.5.d0015.ipe026.5E26	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499458	700010654.5.d0015.ipe026.5E51	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499459	700010654.5.d0015.ipe026.5E6	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499460	700010654.5.d0015.ipe026.5E61	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499461	700010654.5.d0015.ipe026.5E7	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499462	700010654.5.d0015.ipe026.5E9	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499463	700010654.5.d0015.ipe026.5E91	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499464	700010654.5.d0015.ipe026.5F1	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499465	700010654.5.d0015.ipe026.5F10	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499466	700010654.5.d0015.ipe026.5F11	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499467	700010654.5.d0015.ipe026.5F111	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499469	700010654.5.d0015.ipe026.5F12	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499470	700010654.5.d0015.ipe026.5F15	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499471	700010654.5.d0015.ipe026.5F17	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499472	700010654.5.d0015.ipe026.5F2	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499473	700010654.5.d0015.ipe026.5F21	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499474	700010654.5.d0015.ipe026.5F31	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G
MF499475	700010654.5.d0015.ipe026.5F32	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499476	700010654.5.d0015.ipe026.5F4	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499477	700010654.5.d0015.ipe026.5F5	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499478	700010654.5.d0015.ipe026.5F51	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499479	700010654.5.d0015.ipe026.5F6	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499480	700010654.5.d0015.ipe026.5F7	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499481	700010654.5.d0015.ipe026.5G1	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499482	700010654.5.d0015.ipe026.5G10	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499483	700010654.5.d0015.ipe026.5G101	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499484	700010654.5.d0015.ipe026.5G102	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499485	700010654.5.d0015.ipe026.5G12	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,23*,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499486	700010654.5.d0015.ipe026.5G16	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499487	700010654.5.d0015.ipe026.5G21	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499488	700010654.5.d0015.ipe026.5G3	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499489	700010654.5.d0015.ipe026.5G6	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499490	700010654.5.d0015.ipe026.5G61	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499491	700010654.5.d0015.ipe026.5G7	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499492	700010654.5.d0015.ipe026.5G9	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499493	700010654.5.d0015.ipe026.5H10	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499494	700010654.5.d0015.ipe026.5H15	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499495	700010654.5.d0015.ipe026.5H3	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499496	700010654.5.d0015.ipe026.5H4	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499497	700010654.5.d0015.ipe026.5H5	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499498	700010654.5.d0015.ipe026.5H6	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499499	700010654.5.d0015.ipe026.5H61	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499500	700010654.5.d0015.ipe026.5H7	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499501	700010654.5.d0015.ipe026.5H9	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499502	700010654.5.d0015.ipe026.5H91	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499503	700010654.5.d0026.ipe026.5A12	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499504	700010654.5.d0026.ipe026.5A14	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499505	700010654.5.d0026.ipe026.5A18	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499506	700010654.5.d0026.ipe026.5A19	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499507	700010654.5.d0026.ipe026.5A2	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499508	700010654.5.d0026.ipe026.5A22	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499509	700010654.5.d0026.ipe026.5A3	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499510	700010654.5.d0026.ipe026.5A4	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499511	700010654.5.d0026.ipe026.5A5	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499512	700010654.5.d0026.ipe026.5A6_a	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499513	700010654.5.d0026.ipe026.5A8	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499514	700010654.5.d0026.ipe026.5A9	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,88T,113K,116T,120T,127E,128K,143K,148V,178T,208G,228T
MF499515	700010654.5.d0026.ipe026.5B1	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499516	700010654.5.d0026.ipe026.5B10	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499518	700010654.5.d0026.ipe026.5B2_a	USA	2008		genomic RNA		subtype: B	1	231	4R,6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499517	700010654.5.d0026.ipe026.5B20	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G
MF499519	700010654.5.d0026.ipe026.5B6	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499520	700010654.5.d0026.ipe026.5B8	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499521	700010654.5.d0026.ipe026.5C10	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499522	700010654.5.d0026.ipe026.5C11	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499523	700010654.5.d0026.ipe026.5C13	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499524	700010654.5.d0026.ipe026.5C21	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499525	700010654.5.d0026.ipe026.5C3	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499526	700010654.5.d0026.ipe026.5D11	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499527	700010654.5.d0026.ipe026.5D12	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499528	700010654.5.d0026.ipe026.5D4	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499529	700010654.5.d0026.ipe026.5D6	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499530	700010654.5.d0026.ipe026.5D7	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499531	700010654.5.d0026.ipe026.5D8	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499532	700010654.5.d0026.ipe026.5E11	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,189S,208G,213D
MF499533	700010654.5.d0026.ipe026.5E12	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499534	700010654.5.d0026.ipe026.5E2	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499535	700010654.5.d0026.ipe026.5E20	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499536	700010654.5.d0026.ipe026.5E22	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499537	700010654.5.d0026.ipe026.5E32	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499538	700010654.5.d0026.ipe026.5E5	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499539	700010654.5.d0026.ipe026.5E7	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499540	700010654.5.d0026.ipe026.5E9	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499541	700010654.5.d0026.ipe026.5F10	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499542	700010654.5.d0026.ipe026.5F12	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499543	700010654.5.d0026.ipe026.5F18	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499544	700010654.5.d0026.ipe026.5F3	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499545	700010654.5.d0026.ipe026.5F4	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499546	700010654.5.d0026.ipe026.5F8_a	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499547	700010654.5.d0026.ipe026.5G1	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499548	700010654.5.d0026.ipe026.5G11	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499549	700010654.5.d0026.ipe026.5G12	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499550	700010654.5.d0026.ipe026.5G15	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499552	700010654.5.d0026.ipe026.5G21	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499553	700010654.5.d0026.ipe026.5G22	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499554	700010654.5.d0026.ipe026.5G4	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499555	700010654.5.d0026.ipe026.5G5	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499556	700010654.5.d0026.ipe026.5G7	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499557	700010654.5.d0026.ipe026.5G8	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116A,120T,148V,178T,180D,208G
MF499558	700010654.5.d0026.ipe026.5H14	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499559	700010654.5.d0026.ipe026.5H2_a	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,142AV,148V,178T,204V,208G,213D
MF499560	700010654.5.d0026.ipe026.5H4	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G
MF499561	700010654.5.d0026.ipe026.5H9	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499562	700010654.5.d0047.ipe026.flA1	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499563	700010654.5.d0047.ipe026.flA10	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499564	700010654.5.d0047.ipe026.flB3	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499565	700010654.5.d0047.ipe026.flB6	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499566	700010654.5.d0047.ipe026.flB7	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499567	700010654.5.d0047.ipe026.flC1	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499568	700010654.5.d0047.ipe026.flC4	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499569	700010654.5.d0047.ipe026.flC6	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G
MF499570	700010654.5.d0047.ipe026.flD1	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499571	700010654.5.d0047.ipe026.flD10	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499572	700010654.5.d0047.ipe026.flF11	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499573	700010654.5.d0047.ipe026.flF4	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499574	700010654.5.d0047.ipe026.flG12	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499575	700010654.5.d0047.ipe026.flG13	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G
MF499576	700010654.5.d0047.ipe026.flG6	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499577	700010654.5.d0047.ipe026.flH9	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,116T,120T,148V,178T,208G
MF499578	700010654.5.d0084.ipe026.5A10	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499579	700010654.5.d0084.ipe026.5A2	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499580	700010654.5.d0084.ipe026.5A9	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499581	700010654.5.d0084.ipe026.5C10	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499582	700010654.5.d0084.ipe026.5C12	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499583	700010654.5.d0084.ipe026.5C3	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499584	700010654.5.d0084.ipe026.5C9	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G
MF499585	700010654.5.d0084.ipe026.5D1	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G
MF499586	700010654.5.d0084.ipe026.5D10	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G
MF499587	700010654.5.d0084.ipe026.5D12	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499588	700010654.5.d0084.ipe026.5D3	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499589	700010654.5.d0084.ipe026.5D6	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499590	700010654.5.d0084.ipe026.5D9	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499591	700010654.5.d0084.ipe026.5E1	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499592	700010654.5.d0084.ipe026.5E4	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499593	700010654.5.d0084.ipe026.5E5	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499594	700010654.5.d0084.ipe026.5E9	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499595	700010654.5.d0084.ipe026.5F2	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499596	700010654.5.d0084.ipe026.5F4	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499597	700010654.5.d0084.ipe026.5F9	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499598	700010654.5.d0084.ipe026.5G4	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499599	700010654.5.d0084.ipe026.5H6	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499600	700010654.5.d0084.ipe026.FL_A6	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499601	700010654.5.d0084.ipe026.FL_C4	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G
MF499603	700010654.5.d0084.ipe026.FL_E1	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499604	700010654.5.d0084.ipe026.FL_E2	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499602	700010654.5.d0084.ipe026.FL-C7	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499605	700010654.5.d0084.ipe026.FL-E5	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499606	700010654.5.d0084.ipe026.FL-F2	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499607	700010654.5.d0084.ipe026.FL-F9	USA	2008		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G,213D
MF499608	700010654.5.d0432.ipe026.5A5	USA	2009		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G
MF499609	700010654.5.d0432.ipe026.5A6	USA	2009		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G
MF499610	700010654.5.d0432.ipe026.5B9	USA	2009		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G
MF499611	700010654.5.d0432.ipe026.5D10	USA	2009		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G
MF499612	700010654.5.d0432.ipe026.5F10	USA	2009		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G
MF499613	700010654.5.d0432.ipe026.5F11	USA	2009		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G
MF499614	700010654.5.d0432.ipe026.5H2	USA	2009		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G
MF499615	700010654.5.d0432.ipe026.5H9	USA	2009		genomic RNA		subtype: B	1	231	6L,15L,27I,83L,115V,116A,120S,148V,178T,208G
MF499700	702010047.5.d0019.ipe037.gp1	Malawi	21-May-2007		genomic RNA		subtype: C	1	231	6L,14P,27I,41T,71D,83L,87P,91V,111P,116A,120G,124V,128D,135V,148V,154K,169F,178T,180D,187D,200N,203R,208G,225S
MF499701	702010047.5.d0019.ipe037.gp10	Malawi	21-May-2007		genomic RNA		subtype: C	1	231	6L,14P,27I,41T,71D,83L,91V,111P,116A,120G,124V,128D,135V,148V,154K,169F,178T,180D,187D,200N,203R,208G,225S
MF499702	702010047.5.d0019.ipe037.gp2_a	Malawi	21-May-2007		genomic RNA		subtype: C	1	231	6L,14P,27I,41T,71D,83L,91V,111P,116A,120G,124V,128D,135V,148V,154K,169F,178T,180D,187D,200N,203R,208G,225S
MF499703	702010047.5.d0019.ipe037.gp3_a	Malawi	21-May-2007		genomic RNA		subtype: C	1	231	6L,14P,27I,41T,71D,83L,87P,91V,111P,116A,120G,124V,128D,135V,148V,154K,169F,178T,180D,187D,200N,203R,208G,225S
MF499704	702010047.5.d0019.ipe037.gp4	Malawi	21-May-2007		genomic RNA		subtype: C	1	231	6L,14P,27I,41T,71D,83L,91V,111P,116A,120G,124V,128D,135V,148V,154K,169F,178T,180D,187D,200N,203R,208G,225S
MF499705	702010047.5.d0019.ipe037.gp5	Malawi	21-May-2007		genomic RNA		subtype: C	1	231	6L,14P,27I,41T,71D,83L,91V,111P,116A,120G,124V,128D,135V,148V,154K,169F,178T,180D,187D,200N,203R,208G,225S
MF499706	702010047.5.d0019.ipe037.gp6_a	Malawi	21-May-2007		genomic RNA		subtype: C	1	231	6L,14P,27I,41T,71D,83L,87P,91V,111P,116A,120G,124V,128D,135V,148V,154K,169F,178T,180D,187D,200N,203R,208G,225S
MF499707	702010047.5.d0019.ipe037.gp7	Malawi	21-May-2007		genomic RNA		subtype: C	1	231	6L,14P,27I,41T,71D,83L,91V,111P,116A,120G,124V,128D,135V,148V,154K,169F,178T,180D,187D,200N,203R,208G,225S
MF499708	702010047.5.d0019.ipe037.gp8	Malawi	21-May-2007		genomic RNA		subtype: C	1	231	6L,14P,27I,41T,71D,83L,87P,91V,111P,116A,120G,124V,128D,135V,148V,154K,169F,178T,180D,187D,200N,203R,208G,225S
MF499709	702010047.5.d0019.ipe037.gp9	Malawi	21-May-2007		genomic RNA		subtype: C	1	231	6L,14P,27I,41T,71D,83L,91V,111P,116A,120G,124V,128D,135V,148V,154K,169F,178T,180D,187D,200N,203R,208G,225S
MF499710	702010047.5.d0019.ipe037.wg1	Malawi	21-May-2007		genomic RNA		subtype: C	1	231	6L,14P,27I,41T,71D,83L,91V,111P,116A,120G,124V,128D,135V,148V,154K,169F,178T,180D,187D,200N,203R,208G,225S
MF499711	702010047.5.d0019.ipe037.wg11	Malawi	21-May-2007		genomic RNA		subtype: C	1	231	6L,14P,27I,41T,71D,83L,91V,111P,116A,120G,124V,128D,135V,148V,154K,169F,178T,180D,187D,200N,203R,208G,225S
MF499712	702010047.5.d0019.ipe037.wg16	Malawi	21-May-2007		genomic RNA		subtype: C	1	231	6L,14P,27I,41T,71D,83L,87P,91V,111P,116A,120G,124V,128D,135V,148V,154K,169F,178T,180D,187D,200N,203R,208G,225S
MF499713	702010047.5.d0019.ipe037.wg3	Malawi	21-May-2007		genomic RNA		subtype: C	1	231	6L,14P,27I,41T,71D,83L,87P,91V,111P,116A,120G,124V,128D,135V,148V,154K,169F,178T,180D,187D,200N,203R,208G,225S
MF499714	702010047.5.d0019.ipe037.wg4	Malawi	21-May-2007		genomic RNA		subtype: C	1	231	6L,14P,27I,41T,71D,83L,87P,91V,111P,116A,120G,124V,128D,135V,148V,154K,169F,178T,180D,187D,200N,203R,208G,225S
MF499715	702010047.5.d0019.ipe037.wg5	Malawi	21-May-2007		genomic RNA		subtype: C	1	231	6L,14P,27I,41T,71D,83L,87P,91V,111P,116A,120G,124V,128D,135V,148V,154K,169F,178T,180D,187D,200N,203R,208G,225S
MF499716	702010047.5.d0019.ipe037.wg6	Malawi	21-May-2007		genomic RNA		subtype: C	1	231	6L,14P,27I,41T,71D,83L,87P,91V,111P,116A,120G,124V,128D,135V,148V,154K,169F,178T,180D,187D,200N,203R,208G,225S
MF499717	702010047.5.d0019.ipe037.wg7	Malawi	21-May-2007		genomic RNA		subtype: C	1	231	6L,14P,27I,41T,71D,83L,87P,91V,111P,116A,120G,124V,128D,135V,148V,154K,169F,178T,180D,187D,200N,203R,208G,225S
MF499718	702010047.5.d0019.ipe037.wg8	Malawi	21-May-2007		genomic RNA		subtype: C	1	231	6L,14P,27I,41T,71D,83L,87P,91V,111P,116A,120G,124V,128D,135V,148V,154K,169F,178T,180D,187D,200N,203R,208G,225S
MF499719	702010047.5.d0019.ipe037.wg9	Malawi	21-May-2007		genomic RNA		subtype: C	1	231	6L,14P,27I,41T,71D,83L,91V,111P,116A,120G,124V,128D,135V,148V,154K,169F,178T,180D,187D,200N,203R,208G,225S
MF499720	702010047.5.d0044.ipe037.gp1_a	Malawi	15-Jun-2007		genomic RNA		subtype: C	1	231	6L,14P,27I,41T,71D,83L,91V,111P,116A,120G,124V,128D,135V,148V,154K,169F,178T,180D,187D,200N,203R,208G,225S
MF499721	702010047.5.d0050.ipe037.gp1	Malawi	21-Jun-2007		genomic RNA		subtype: C	1	231	6L,14P,27I,41T,71D,83L,87P,91V,111P,116A,120G,124V,128D,135V,148V,154K,169F,178T,180D,187D,200N,203R,208G,225S
MF499722	702010047.5.d0050.ipe037.gp3	Malawi	21-Jun-2007		genomic RNA		subtype: C	1	231	6L,14P,27I,41T,71D,83L,87P,91V,111P,116A,120G,124V,128D,135V,148V,154K,169F,178T,180D,187D,200N,203R,208G,225S
MF499723	702010047.5.d0050.ipe037.gp5	Malawi	21-Jun-2007		genomic RNA		subtype: C	1	231	6L,14P,27I,41T,71D,83L,87P,91V,111P,116A,120G,124V,128D,135V,148V,154K,169F,178T,180D,187D,200N,203R,208G,225S
MF499724	702010047.5.d0058.ipe037.gp3	Malawi	29-Jun-2007		genomic RNA		subtype: C	1	231	6L,14P,27I,41T,71D,83L,87P,91V,111P,116A,120G,124V,128D,135V,148V,154K,169F,178T,180D,187D,200N,203R,208G,225S
MF499725	702010047.5.d0058.ipe037.gp4	Malawi	29-Jun-2007		genomic RNA		subtype: C	1	231	6L,14P,27I,41T,71D,83L,87P,91V,111P,116A,120G,124V,128D,135V,148V,154K,169F,178T,180D,187D,200N,203R,208G,225S
MF499726	702010047.5.d0205.ipe037.gp1	Malawi	23-Nov-2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83L,87P,91V,111P,116A,120G,124V,128D,135V,148V,154K,169F,178T,180D,187D,200N,203R,208G,225S
MF499727	702010047.5.d0205.ipe037.gp10_	Malawi	23-Nov-2007		genomic RNA		subtype: C	1	231	6L,27I,41T,68I,71D,83L,91V,111P,116A,120G,124V,128D,135V,148V,154K,169F,178T,180D,187D,200N,203R,208G,225S
MF499728	702010047.5.d0205.ipe037.gp11	Malawi	23-Nov-2007		genomic RNA		subtype: C	1	231	6L,27I,41T,68I,71D,83L,91V,111P,116A,120G,124V,128D,135V,144I,148V,154K,169F,178T,180D,187D,200N,203R,208G,225S
MF499729	702010047.5.d0205.ipe037.gp12	Malawi	23-Nov-2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83L,91V,111P,116A,120G,124V,128D,135V,148V,154K,169F,178T,180D,187D,200N,203R,208G,225S
MF499730	702010047.5.d0205.ipe037.gp13	Malawi	23-Nov-2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83L,111P,116A,120G,124V,128D,135V,148V,154K,169F,178T,180D,187D,200N,203R,208G,225S
MF499731	702010047.5.d0205.ipe037.gp14	Malawi	23-Nov-2007		genomic RNA		subtype: C	1	231	6L,14H,27I,41T,71D,83L,87P,91V,111P,116A,120G,124V,128D,135V,148V,154K,169F,178T,180D,187D,200N,203R,208G,225S
MF499732	702010047.5.d0205.ipe037.gp3	Malawi	23-Nov-2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83L,91V,111P,116A,120G,124V,128D,135V,148V,154K,169F,178T,180D,187D,200N,203R,208G,225S
MF499733	702010047.5.d0205.ipe037.gp4	Malawi	23-Nov-2007		genomic RNA		subtype: C	1	231	6L,27I,41T,68I,71D,83L,91V,111P,116A,120G,124V,128D,135V,148V,154K,169F,178T,180D,187D,200N,203R,208G,225S
MF499734	702010047.5.d0205.ipe037.gp5	Malawi	23-Nov-2007		genomic RNA		subtype: C	1	231	6L,14H,27I,41T,71D,83L,87P,91V,111P,116A,120G,124V,128D,135V,148V,154K,169F,178T,181~,187D,200N,203R,208G,225S
MF499735	702010047.5.d0205.ipe037.gp6	Malawi	23-Nov-2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83L,91V,111P,116A,120G,124V,128D,135V,148V,154K,169F,178T,180D,187D,200N,203R,208G,225S
MF499736	702010047.5.d0205.ipe037.gp7_a	Malawi	23-Nov-2007		genomic RNA		subtype: C	1	231	6L,13H,14P,27I,41T,71D,83L,91V,111P,116A,120G,124V,128D,135V,148V,154K,169F,178T,180D,187D,200N,203R,208G,225S
MF499737	702010047.5.d0205.ipe037.gp9	Malawi	23-Nov-2007		genomic RNA		subtype: C	1	231	6L,14H,27I,41T,71D,83L,91V,111P,116A,120G,124V,128D,135V,148V,154K,169F,178T,180D,187D,200N,203R,208G,225S
MF499738	702010047.5.d0708.ipe037.gp1	Malawi	09-Apr-2009		genomic RNA		subtype: C	1	231	6L,27I,41T,68I,71D,83L,111P,116A,120G,124V,128D,135V,148V,169F,178T,180D,187D,200N,203R,208G,225S
MF499739	702010047.5.d0708.ipe037.gp10_	Malawi	09-Apr-2009		genomic RNA		subtype: C	1	231	6L,15L,27I,41T,68I,71D,83L,91V,111P,116A,120G,124V,128D,135V,148V,154K,169F,178T,180D,187D,200N,203R,208G,225S
MF499740	702010047.5.d0708.ipe037.gp11	Malawi	09-Apr-2009		genomic RNA		subtype: C	1	231	6L,27I,41T,68I,71D,83L,86I,91V,111P,116A,120G,124V,128D,135V,148V,169F,178T,180D,187D,200N,203R,208G,225S
MF499741	702010047.5.d0708.ipe037.gp12	Malawi	09-Apr-2009		genomic RNA		subtype: C	1	231	6L,15L,27I,41T,68I,71D,83L,91V,111P,116A,120G,124V,128D,135V,148V,154K,169F,178T,180D,187D,200N,203R,208G,225S
MF499742	702010047.5.d0708.ipe037.gp13_	Malawi	09-Apr-2009		genomic RNA		subtype: C	1	231	6L,27I,41T,68I,71D,83L,86I,91V,111P,116A,120G,124V,128D,135V,148V,154K,169F,178T,180D,187D,200N,203R,208G,225S
MF499743	702010047.5.d0708.ipe037.gp14	Malawi	09-Apr-2009		genomic RNA		subtype: C	1	231	6L,15L,27I,41T,68I,71D,83L,86I,91V,111P,116A,120G,124V,128D,135V,148V,154K,169F,178T,180D,187D,200N,203R,208G,225S
MF499744	702010047.5.d0708.ipe037.gp15	Malawi	09-Apr-2009		genomic RNA		subtype: C	1	231	6L,27I,41T,68I,71D,83L,91V,111P,116A,120G,124V,128D,135V,148V,169F,178T,180D,187D,200N,203R,208G,225S
MF499745	702010047.5.d0708.ipe037.gp16	Malawi	09-Apr-2009		genomic RNA		subtype: C	1	231	6L,27I,41T,68I,71D,83L,91V,111P,116A,120G,124V,128D,135V,148V,169F,178T,180D,187D,200N,203R,208G,225S
MF499746	702010047.5.d0708.ipe037.gp2_a	Malawi	09-Apr-2009		genomic RNA		subtype: C	1	231	6L,27I,41T,68I,71D,83L,91V,111P,116A,120G,124V,128D,135V,148V,169F,178T,180D,187D,200N,203R,208G,225S
MF499747	702010047.5.d0708.ipe037.gp3	Malawi	09-Apr-2009		genomic RNA		subtype: C	1	231	6L,27I,41T,68I,71D,83L,91V,111P,116A,120G,124V,128D,135V,148V,169F,178T,180D,187D,200N,203R,208G,225S
MF499748	702010047.5.d0708.ipe037.gp4	Malawi	09-Apr-2009		genomic RNA		subtype: C	1	231	6L,27I,41T,68I,71D,83L,86I,91V,111P,116A,120G,124V,128D,135V,148V,169F,178T,180D,187D,200N,203R,208G,225S
MF499749	702010047.5.d0708.ipe037.gp5	Malawi	09-Apr-2009		genomic RNA		subtype: C	1	231	6L,15L,27I,41T,68I,71D,83L,86I,91V,111P,116A,120G,124V,128D,135V,148V,154K,169F,178T,180D,187D,200N,203R,208G,225S
MF499750	702010047.5.d0708.ipe037.gp6_a	Malawi	09-Apr-2009		genomic RNA		subtype: C	1	231	6L,27I,41T,68I,71D,83L,91V,111P,116A,120G,124V,128D,135V,148V,154K,169F,178T,180D,187D,200N,203R,208G,225S
MF499751	702010047.5.d0708.ipe037.gp7	Malawi	09-Apr-2009		genomic RNA		subtype: C	1	231	6L,14H,27I,36I,41T,71D,83L,86I,91V,111P,116A,120G,124V,128D,135V,148V,169F,178T,180D,187D,200N,203R,208G,225S
MF499752	702010047.5.d0708.ipe037.gp8	Malawi	09-Apr-2009		genomic RNA		subtype: C	1	231	6L,27I,41T,68I,71D,83L,91V,111P,116A,120G,124V,128D,135V,148V,169F,178T,180D,187D,200N,203R,208G,225S
MF499753	702010047.5.d0708.ipe037.gp9	Malawi	09-Apr-2009		genomic RNA		subtype: C	1	231	6L,14H,27I,36I,41T,71D,83L,86I,91V,111P,116A,120G,124V,128D,135V,148V,154K,169F,178T,180D,187D,200N,203R,208G,225S
MF499876	703010010.5.d0009.ipe019.gp1	Malawi	18-Dec-2006		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
MF499877	703010010.5.d0009.ipe019.gp10	Malawi	18-Dec-2006		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
MF499878	703010010.5.d0009.ipe019.gp2	Malawi	18-Dec-2006		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
MF499879	703010010.5.d0009.ipe019.gp3	Malawi	18-Dec-2006		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
MF499880	703010010.5.d0009.ipe019.gp4	Malawi	18-Dec-2006		genomic RNA		subtype: C	1	231	1L,6A,14S,27I,41T,71D,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
MF499881	703010010.5.d0009.ipe019.gp5	Malawi	18-Dec-2006		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
MF499882	703010010.5.d0009.ipe019.gp6	Malawi	18-Dec-2006		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
MF499883	703010010.5.d0009.ipe019.gp7	Malawi	18-Dec-2006		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
MF499884	703010010.5.d0009.ipe019.gp8	Malawi	18-Dec-2006		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
MF499885	703010010.5.d0009.ipe019.gp9	Malawi	18-Dec-2006		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
MF499886	703010010.5.d0026.ipe019.gp10	Malawi	04-Jan-2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,115V,116A,120S,128D,148V,154K,161L,169F,178T,180D,187D,203R,208G
MF499887	703010010.5.d0026.ipe019.gp2	Malawi	04-Jan-2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
MF499888	703010010.5.d0026.ipe019.gp3_a	Malawi	04-Jan-2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
MF499889	703010010.5.d0026.ipe019.gp4_a	Malawi	04-Jan-2007		genomic RNA		subtype: C	1	231	6A,14S,15IKRT,27I,41T,71D,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
MF499890	703010010.5.d0026.ipe019.gp5	Malawi	04-Jan-2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
MF499891	703010010.5.d0026.ipe019.gp6	Malawi	04-Jan-2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
MF499892	703010010.5.d0026.ipe019.gp7	Malawi	04-Jan-2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
MF499893	703010010.5.d0026.ipe019.gp8_a	Malawi	04-Jan-2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
MF499894	703010010.5.d0072.ipe019.5A1	Malawi	19-Feb-2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
MF499895	703010010.5.d0072.ipe019.5A2	Malawi	19-Feb-2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
MF499896	703010010.5.d0072.ipe019.5A4	Malawi	19-Feb-2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
MF499897	703010010.5.d0072.ipe019.5B1	Malawi	19-Feb-2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
MF499898	703010010.5.d0072.ipe019.5B10	Malawi	19-Feb-2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
MF499899	703010010.5.d0072.ipe019.5B2	Malawi	19-Feb-2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
MF499900	703010010.5.d0072.ipe019.5B4	Malawi	19-Feb-2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
MF499901	703010010.5.d0072.ipe019.5B6	Malawi	19-Feb-2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
MF499902	703010010.5.d0072.ipe019.5B7	Malawi	19-Feb-2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
MF499903	703010010.5.d0072.ipe019.5B9	Malawi	19-Feb-2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
MF499904	703010010.5.d0072.ipe019.5C2	Malawi	19-Feb-2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
MF499905	703010010.5.d0072.ipe019.5C4	Malawi	19-Feb-2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
MF499906	703010010.5.d0072.ipe019.5C5	Malawi	19-Feb-2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
MF499907	703010010.5.d0188.ipe019.gp1	Malawi	15-Jun-2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
MF499908	703010010.5.d0188.ipe019.gp10	Malawi	15-Jun-2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,115V,116T,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
MF499909	703010010.5.d0188.ipe019.gp11	Malawi	15-Jun-2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
MF499910	703010010.5.d0188.ipe019.gp12_	Malawi	15-Jun-2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,115V,116T,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
MF499911	703010010.5.d0188.ipe019.gp13	Malawi	15-Jun-2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,115V,116T,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
MF499912	703010010.5.d0188.ipe019.gp2	Malawi	15-Jun-2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,57K,71D,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
MF499913	703010010.5.d0188.ipe019.gp3	Malawi	15-Jun-2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,115V,116T,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
MF499914	703010010.5.d0188.ipe019.gp5_a	Malawi	15-Jun-2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,115V,116T,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
MF499915	703010010.5.d0188.ipe019.gp6_a	Malawi	15-Jun-2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,52ILV,71D,83L,91V,115V,116APST,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
MF499916	703010010.5.d0188.ipe019.gp7	Malawi	15-Jun-2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,115V,116T,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
MF499917	703010010.5.d0188.ipe019.gp8_a	Malawi	15-Jun-2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,115V,116T,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
MF499918	703010010.5.d0188.ipe019.gp9	Malawi	15-Jun-2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,115V,116A,120S,128D,148V,154K,156V,169F,178T,180D,187D,203R,208G
MF500037	703010200.5.d0011.ipe018.gp14_	Malawi	2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,50E,71D,75D,83L,111R,115V,116A,120G,128D,148V,154K,169F,177G,178T,180D,203R,208G,225S
MF500038	703010200.5.d0011.ipe018.gp15_	Malawi	2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,50E,71D,111R,115V,116A,120G,128D,148V,154K,169F,177G,178T,180D,203R,208G,210S,225S
MF500039	703010200.5.d0011.ipe018.gp17	Malawi	2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,50E,71D,111R,115V,116A,120G,128D,148V,154K,169F,177G,178T,180D,203R,208G,210S,225S
MF500040	703010200.5.d0011.ipe018.gp18	Malawi	2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,50E,71D,75D,83L,111R,115V,116A,120G,128D,148V,154K,169F,177G,178T,180D,203R,208G,225S
MF500041	703010200.5.d0011.ipe018.wg10	Malawi	2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,50E,71D,111R,115V,116A,120G,128D,148V,154K,169F,177G,178T,180D,203R,208G,210S,225S
MF500042	703010200.5.d0011.ipe018.wg14_	Malawi	2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,50E,71D,75D,83L,111R,115V,116A,120G,128D,148V,154K,169F,177G,178T,180D,203R,208G,225S
MF500043	703010200.5.d0011.ipe018.wg15_	Malawi	2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,50E,71D,75D,83L,111R,115V,116A,120G,128D,148V,154K,169F,177G,178T,180D,203R,208G,225S
MF500044	703010200.5.d0011.ipe018.wg16_	Malawi	2007		genomic RNA		subtype: C	1	231	4HQ,6A,14S,27I,41T,50E,71D,111R,115V,116A,120G,128D,148V,154K,169F,177G,178T,180D,203R,208G,210S,225S
MF500045	703010200.5.d0011.ipe018.wg17_	Malawi	2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,50E,71D,111R,115V,116A,120G,128D,148V,154K,169F,177G,178T,180D,203R,208G,210S,225S
MF500047	703010200.5.d0011.ipe018.wg2_a	Malawi	2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,50E,71D,111R,115V,116A,120G,128D,148V,154K,169F,177G,178T,180D,203R,208G,210S,225S
MF500046	703010200.5.d0011.ipe018.wg23	Malawi	2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,50E,71D,75D,83L,111R,115V,116A,120G,128D,148V,154K,169F,177G,178T,180D,203R,208G,225S
MF500048	703010200.5.d0011.ipe018.wg3	Malawi	2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,50E,71D,111R,115V,116A,120G,128D,148V,154K,169F,177G,178T,180D,203R,208G,210S,225S
MF500049	703010200.5.d0011.ipe018.wg5	Malawi	2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,50E,71D,111R,115V,116A,120G,128D,148V,154K,169F,177G,178T,180D,203R,208G,210S,225S
MF500050	703010200.5.d0011.ipe018.wg6	Malawi	2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,50E,71D,111R,115V,116A,120G,128D,148V,154K,169F,177G,178T,180D,203R,208G,210S,225S
MF500051	703010200.5.d0011.ipe018.wg7	Malawi	2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,50E,71D,75D,83L,111R,115V,116A,120G,128D,148V,154K,169F,177G,178T,180D,203R,208G,225S
MF500052	703010200.5.d0011.ipe018.wg9	Malawi	2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,50E,71D,111R,115V,116A,120G,128D,148V,154K,169F,177G,178T,180D,203R,208G,210S,225S
MF500053	703010200.5.d0074.ipe018.br.gp	Malawi	2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,50E,71D,84R,111R,115V,116A,120G,128D,148V,154K,169F,177G,178T,180D,203R,208G,210S,225S
MF500054	703010200.5.d0074.ipe018.br.gp	Malawi	2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,50E,71D,111R,115V,116A,120G,128D,148V,154K,169F,177G,178T,180D,203R,208G,210S,225S
MF500055	703010200.5.d0074.ipe018.br.gp	Malawi	2007		genomic RNA		subtype: C	1	231	6A,14S,27I,29D,41T,50E,71D,111R,115V,116A,120G,128D,148V,154K,169F,177G,178T,180D,203R,208G,210S,225S
MF500056	703010200.5.d0074.ipe018.br.gp	Malawi	2007		genomic RNA		subtype: C	1	231	6A,14S,27I,29D,41T,50E,71D,111R,115V,116A,120G,128D,148V,154K,169F,177G,178T,180D,203R,208G,225S
MF500057	703010200.5.d0074.ipe018.br.gp	Malawi	2007		genomic RNA		subtype: C	1	231	6A,14S,27I,29D,41T,50E,71D,111R,115V,116A,120G,128D,148V,154K,169F,177G,178T,180D,203R,208G,210S,225S
MF500058	703010200.5.d0074.ipe018.br.gp	Malawi	2007		genomic RNA		subtype: C	1	231	6A,14S,27I,29D,41T,50E,71D,111R,115V,116A,120G,128D,148V,154K,169F,177G,178T,180D,203R,208G,210S,225S
MF500059	703010200.5.d0074.ipe018.br.gp	Malawi	2007		genomic RNA		subtype: C	1	231	6A,14S,27I,29D,41T,50E,71D,111R,115V,116A,120G,128D,148V,154K,169F,177G,178T,180D,203R,208G,225S
MF500060	703010200.5.d0074.ipe018.br.gp	Malawi	2007		genomic RNA		subtype: C	1	231	6A,14S,27I,29D,41T,50E,71D,111R,115V,116A,120G,128D,148V,154K,169F,177G,178T,180D,203R,208G,210S,225S
MF500061	703010200.5.d0074.ipe018.br.gp	Malawi	2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,50E,71D,111R,115V,116A,120G,128D,148V,154K,169F,177G,178T,180D,203R,208G,210S,225S
MF500062	703010200.5.d0074.ipe018.br.gp	Malawi	2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,50E,71D,111R,115V,116A,120G,128D,148V,154K,169F,177G,178T,180D,203R,208G,210S,225S
MF500063	703010200.5.d0074.ipe018.br.gp	Malawi	2007		genomic RNA		subtype: C	1	231	6A,14S,27I,29D,41T,50E,71D,111R,115V,116A,120G,128D,148V,154K,169F,177G,178T,180D,203R,208G,210S,225S
MF500064	703010200.5.d0074.ipe018.br.gp	Malawi	2007		genomic RNA		subtype: C	1	231	6A,14S,27I,29D,41T,50E,71D,111R,115V,116A,120G,128D,148V,154K,169F,177G,178T,180D,203R,208G,210S,225S
MF500065	703010200.5.d0074.ipe018.br.gp	Malawi	2007		genomic RNA		subtype: C	1	231	6A,14S,27I,29D,41T,50E,71D,111R,115V,116A,120G,128D,148V,154K,169F,177G,178T,180D,203R,208G,210S,225S
MF500066	703010200.5.d0074.ipe018.br.gp	Malawi	2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,50S,71D,83L,116A,120G,128D,148V,154K,169F,178T,180D,203R,208G,225S
MF500067	703010200.5.d0074.ipe018.br.gp	Malawi	2007		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,50E,71D,75D,83L,111R,115V,116A,120G,128D,148V,154K,169F,177G,178T,180D,203R,208G,210S,225S
MF500068	703010200.5.d0438.ipe018.gp1	Malawi	2008		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,50E,71D,75D,111R,115V,116A,120G,148V,154K,169F,177G,178T,180D,203R,208G,210S,225S
MF500069	703010200.5.d0438.ipe018.gp10	Malawi	2008		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,50E,71D,75D,83L,111R,115V,116A,120G,148V,154K,169F,177G,178T,180D,203R,208G,210S,225S
MF500070	703010200.5.d0438.ipe018.gp12_	Malawi	2008		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,50E,71D,75D,111R,115V,116A,120G,146CGRS,148V,154K,169F,177G,178T,180D,203R,208G,210S,225S
MF500071	703010200.5.d0438.ipe018.gp14	Malawi	2008		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,50E,71D,75D,111R,115V,116A,120G,148V,154K,169F,177G,178T,180D,183I,203R,208G,210S,225S
MF500072	703010200.5.d0438.ipe018.gp15	Malawi	2008		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,50E,71D,75D,111R,115V,116A,120G,148V,154K,169F,177G,178T,180D,203R,208G,210S,225S
MF500073	703010200.5.d0438.ipe018.gp16	Malawi	2008		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,50E,71D,75D,83L,111R,115V,116A,120G,148V,154K,169F,177G,178T,180D,203R,208G,210S,225S
MF500074	703010200.5.d0438.ipe018.gp2	Malawi	2008		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,50E,71D,75D,83L,111R,115V,116A,120G,148V,154K,169F,177G,178T,180D,203R,208G,210S,225S
MF500075	703010200.5.d0438.ipe018.gp3	Malawi	2008		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,50E,71D,75D,111R,115V,116A,120G,148V,154K,169F,177G,178T,180D,203R,208G,210S,225S
MF500076	703010200.5.d0438.ipe018.gp4	Malawi	2008		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,50E,71D,75D,83L,111R,115V,116A,120G,148V,154K,169F,177G,178T,180D,187K,203R,208G,210S,225S
MF500077	703010200.5.d0438.ipe018.gp6	Malawi	2008		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,50E,71D,75D,111R,115V,116A,120G,148V,154K,169F,177G,178T,180D,203R,208G,210S,225S
MF500078	703010200.5.d0438.ipe018.gp9_a	Malawi	2008		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,50E,71D,75D,83L,111R,115V,116A,120G,148V,154K,169F,177G,178T,180D,203R,208G,210S,225S
MF500079	703010200.5.d0696.ipe018.gp1	Malawi	2009		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,50E,71D,75D,111R,115V,116A,120G,148V,154K,169F,177G,178T,180D,203R,208G,210S,225S
MF500080	703010200.5.d0696.ipe018.gp10	Malawi	2009		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,50E,71D,75D,83L,111R,115V,116A,120G,148V,154K,169F,177G,178T,180D,203R,208G,225S
MF500081	703010200.5.d0696.ipe018.gp11	Malawi	2009		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,50E,71D,75D,83L,111R,115V,116A,120G,148V,154K,169F,177G,178T,180D,203R,208G,210S,225S
MF500082	703010200.5.d0696.ipe018.gp12	Malawi	2009		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,50E,71D,75D,83L,111R,115V,116A,120G,148V,154K,169F,177G,178T,180D,203R,208G,225S
MF500083	703010200.5.d0696.ipe018.gp13	Malawi	2009		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,50E,71D,75D,83L,111R,115V,116A,120G,148V,154K,169F,177G,178T,180D,203R,208G,210S,225S
MF500084	703010200.5.d0696.ipe018.gp14	Malawi	2009		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,50E,71D,75D,83L,111R,115V,116A,120G,148V,154K,169F,177G,178T,180D,203R,208G,210S,225S
MF500085	703010200.5.d0696.ipe018.gp15	Malawi	2009		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,50E,71D,75D,83L,111R,115V,116A,120G,148V,154K,169F,177G,178T,180D,185V,203R,208G,225S
MF500086	703010200.5.d0696.ipe018.gp16	Malawi	2009		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,50E,71D,75D,83L,111R,115V,116A,120G,148V,154K,169F,177G,178T,180D,203R,208G,210S,225S
MF500087	703010200.5.d0696.ipe018.gp2_a	Malawi	2009		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,50E,71D,75D,83L,111R,115V,116A,120G,148V,154K,169F,177G,178T,180D,203R,208G,210S,225S
MF500088	703010200.5.d0696.ipe018.gp3	Malawi	2009		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,50E,71D,75D,83L,111R,115V,116A,120G,148V,154K,169F,177G,178T,180D,203R,208G,225S
MF500089	703010200.5.d0696.ipe018.gp4_a	Malawi	2009		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,50E,71D,75D,83L,111R,115V,116A,120G,148V,154K,169F,177G,178T,180D,203R,208G,225S
MF500090	703010200.5.d0696.ipe018.gp5	Malawi	2009		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,50E,71D,75D,83L,111R,115V,116A,120G,148V,154K,169F,177G,178T,180D,203R,208G,225S
MF500091	703010200.5.d0696.ipe018.gp6_a	Malawi	2009		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,50E,71D,75D,83L,111R,115V,116A,120G,148V,154K,169F,177G,178T,180D,203R,208G,210S,225S
MF500092	703010200.5.d0696.ipe018.gp7_a	Malawi	2009		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,50E,71D,75D,83L,96IM,111R,115V,116A,120G,148V,154K,169F,177G,178T,180D,203R,208G,210S,225S
MF500093	703010200.5.d0696.ipe018.gp8	Malawi	2009		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,50E,71D,75D,83L,111R,115V,116A,120G,148V,154K,169F,177G,178T,180D,203R,208G,210S,225S
MF500094	703010200.5.d0696.ipe018.gp9	Malawi	2009		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,50E,71D,75D,83L,111R,115V,116A,120G,148V,154K,169F,177G,178T,180D,203R,208G,210S,225S
MF500232	703010228.5.d0019.ipe025.gp13	Malawi	2007		genomic RNA		subtype: C	1	231	6A,27I,41T,71D,79D,83L,91V,116A,120S,128D,136M,148V,154K,169F,178T,180D,187D,203R,208G
MF500233	703010228.5.d0019.ipe025.gp2	Malawi	2007		genomic RNA		subtype: C	1	231	6A,27I,41T,71D,79D,83L,91V,116A,120S,128D,136M,148V,154K,169F,178T,180D,187D,203R,208G
MF500234	703010228.5.d0019.ipe025.gp3	Malawi	2007		genomic RNA		subtype: C	1	231	6A,27I,41T,71D,79D,83L,91V,116A,120S,128D,136M,148V,154K,169F,178T,180D,187D,203R,208G
MF500235	703010228.5.d0019.ipe025.gp4	Malawi	2007		genomic RNA		subtype: C	1	231	6A,27I,41T,71D,79D,83L,91V,116A,120S,128D,136M,148V,154K,169F,178T,180D,187D,203R,208G
MF500236	703010228.5.d0019.ipe025.gp5	Malawi	2007		genomic RNA		subtype: C	1	231	6A,27I,41T,71D,79D,83L,91V,116A,120S,128D,136M,148V,154K,169F,178T,180D,187D,203R,208G
MF500237	703010228.5.d0019.ipe025.gp6	Malawi	2007		genomic RNA		subtype: C	1	231	6A,27I,41T,71D,79D,83L,91V,116A,120S,128D,136M,148V,154K,169F,176H,178T,180D,187D,203R,208G
MF500238	703010228.5.d0019.ipe025.gp7	Malawi	2007		genomic RNA		subtype: C	1	231	6A,27I,41T,71D,79D,83L,91V,116A,120S,128D,136M,148V,154K,169F,178T,180D,187D,203R,205I,208G
MF500239	703010228.5.d0019.ipe025.gp8	Malawi	2007		genomic RNA		subtype: C	1	231	6A,27I,41T,71D,79D,83L,91V,116A,120S,128D,136M,148V,154K,169F,178T,180D,187D,203R,208G
MF500240	703010228.5.d0019.ipe025.gp9	Malawi	2007		genomic RNA		subtype: C	1	231	6A,27I,41T,71D,79D,83L,91V,116A,120S,128D,136M,148V,154K,169F,178T,180D,187D,203R,208G
MF500241	703010228.5.d0196.ipe025.gp10	Malawi	2007		genomic RNA		subtype: C	1	231	6A,27I,41T,71D,79D,83L,91V,116A,120S,128D,136M,148V,154K,169F,178T,180D,187D,203R,208G
MF500242	703010228.5.d0196.ipe025.gp13	Malawi	2007		genomic RNA		subtype: C	1	231	6A,27I,41T,71D,79D,83L,91V,116A,120S,128D,136M,148V,154K,169F,178T,180D,187D,203R,208G
MF500243	703010228.5.d0196.ipe025.gp15	Malawi	2007		genomic RNA		subtype: C	1	231	6A,27I,41T,71D,79D,83L,91V,116A,120S,128D,136M,148V,154K,169F,178T,180D,187D,203R,208G
MF500244	703010228.5.d0196.ipe025.gp16_	Malawi	2007		genomic RNA		subtype: C	1	231	6A,27I,41T,71D,79D,83L,91V,116A,120S,128D,136M,148V,154K,169F,178T,180D,187D,203R,208G
MF500245	703010228.5.d0196.ipe025.gp17	Malawi	2007		genomic RNA		subtype: C	1	231	6A,27I,41T,71D,79D,83L,91V,116A,120S,128D,136M,148V,154K,169F,178T,180D,187D,203R,208G
MF500246	703010228.5.d0196.ipe025.gp18_	Malawi	2007		genomic RNA		subtype: C	1	231	6A,27I,41T,71D,79D,83L,91V,116A,120S,128D,136M,148V,154K,169F,178T,180D,187D,203R,208G
MF500247	703010228.5.d0196.ipe025.gp19	Malawi	2007		genomic RNA		subtype: C	1	231	6A,27I,41T,71D,79D,83L,91V,116A,120S,128D,136M,148V,154K,169F,178T,180D,187D,203R,208G
MF500248	703010228.5.d0196.ipe025.gp20	Malawi	2007		genomic RNA		subtype: C	1	231	6A,27I,41T,71D,79D,83L,91V,116A,120S,128D,136M,148V,154K,169F,178T,180D,187D,203R,208G
MF500249	703010228.5.d0196.ipe025.gp21	Malawi	2007		genomic RNA		subtype: C	1	231	6A,27I,41T,71D,79D,83L,91V,116A,120S,128D,136M,148V,154K,169F,178T,180D,203R,208G
MF500250	703010228.5.d0196.ipe025.gp4	Malawi	2007		genomic RNA		subtype: C	1	231	6A,27I,41T,71D,79D,83L,91V,116A,120S,128D,136M,148V,154K,169F,178T,180D,187D,203R,208G
MF500251	703010228.5.d0196.ipe025.gp5_a	Malawi	2007		genomic RNA		subtype: C	1	231	6A,27I,41T,71D,79D,83L,91V,95LPQR,116A,120S,128D,136M,148V,154K,169F,178T,180D,187D,203R,208G
MF500252	703010228.5.d0196.ipe025.gp6	Malawi	2007		genomic RNA		subtype: C	1	231	6A,27I,41T,71D,79D,83L,91V,116A,120S,128D,136M,148V,154K,169F,178T,180D,203R,208G
MF500253	703010228.5.d0196.ipe025.gp7	Malawi	2007		genomic RNA		subtype: C	1	231	6A,27I,41T,71D,79D,83L,91V,116A,120R,128D,136M,148V,154K,169F,178T,180D,203R,208G
MF500254	703010228.5.d0196.ipe025.gp8	Malawi	2007		genomic RNA		subtype: C	1	231	6A,27I,41T,71D,79D,83L,91V,116A,120S,128D,136M,148V,154K,169F,178T,180D,187D,203R,208G
MF500255	703010228.5.d0196.ipe025.gp9	Malawi	2007		genomic RNA		subtype: C	1	231	6A,27I,41T,71D,79D,83L,91V,116A,120S,128D,136M,148V,154K,169F,178T,180D,203R,208G
MF500256	703010228.5.d0707.ipe025.gp1	Malawi	2009		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,116A,120S,128D,136M,148V,154K,169F,178T,180D,187D,203R,208G
MF500257	703010228.5.d0707.ipe025.gp11	Malawi	2009		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,116A,120S,128D,136M,148V,154K,169F,178T,180D,187D,203R,208G
MF500258	703010228.5.d0707.ipe025.gp12	Malawi	2009		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,116A,120S,128D,136M,148V,154K,169F,178T,180D,187D,203R,208G
MF500259	703010228.5.d0707.ipe025.gp13	Malawi	2009		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,116A,120S,128D,136M,148V,154K,169F,178T,180D,187D,203R,208G
MF500260	703010228.5.d0707.ipe025.gp14	Malawi	2009		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,116A,120S,128D,136M,148V,154K,169F,178T,180D,187D,203R,208G
MF500261	703010228.5.d0707.ipe025.gp15	Malawi	2009		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,116A,120S,128D,136M,148V,154K,169F,178T,180D,187D,203R,208G
MF500262	703010228.5.d0707.ipe025.gp16	Malawi	2009		genomic RNA		subtype: C	1	231	6A,27I,41T,71D,79D,83L,91V,116A,120S,128D,136M,148V,154K,169F,178T,180D,187D,203R,208G
MF500263	703010228.5.d0707.ipe025.gp2	Malawi	2009		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,116A,120S,128D,136M,148V,154K,169F,178T,180D,187D,203R,208G
MF500264	703010228.5.d0707.ipe025.gp3	Malawi	2009		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,116A,120S,128D,136M,148V,154K,169F,178T,180D,187D,203R,208G
MF500265	703010228.5.d0707.ipe025.gp4	Malawi	2009		genomic RNA		subtype: C	1	231	6A,27I,41T,71D,79D,83L,91V,116A,120S,128D,136M,148V,154K,169F,178T,180D,187D,203R,208G
MF500266	703010228.5.d0707.ipe025.gp5	Malawi	2009		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,116A,120S,128D,136M,148V,154K,169F,178T,180D,187D,203R,208G
MF500267	703010228.5.d0707.ipe025.gp6	Malawi	2009		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,116A,120S,128D,136M,148V,154K,169F,178T,180D,187D,191I,203R,208G
MF500268	703010228.5.d0707.ipe025.gp7	Malawi	2009		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,116A,120S,128D,136M,148V,154K,169F,178T,180D,203R,208G
MF500269	703010228.5.d0707.ipe025.gp8	Malawi	2009		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,116A,120S,128D,136M,148V,154K,169F,178T,180D,187D,203R,208G
MF500270	703010228.5.d0707.ipe025.gp9	Malawi	2009		genomic RNA		subtype: C	1	231	6A,14S,27I,41T,71D,83L,91V,116A,120S,128D,136M,148V,154K,169F,178T,180D,187D,203R,208G
MF500990	705010078.5.d0011.ipe032.gp1	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF500991	705010078.5.d0011.ipe032.gp10	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF500992	705010078.5.d0011.ipe032.gp2_a	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF500993	705010078.5.d0011.ipe032.gp3	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF500994	705010078.5.d0011.ipe032.gp4	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF500995	705010078.5.d0011.ipe032.gp5	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF500996	705010078.5.d0011.ipe032.gp6	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF500997	705010078.5.d0011.ipe032.gp9_a	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF500998	705010078.5.d0032.ipe032.gp10	South Africa	2007		genomic RNA		subtype: C	1	231	6F,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF500999	705010078.5.d0032.ipe032.gp11	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501000	705010078.5.d0032.ipe032.gp13_	South Africa	2007		genomic RNA		subtype: C	1	231	6L,20*LS,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501001	705010078.5.d0032.ipe032.gp15	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501002	705010078.5.d0032.ipe032.gp17	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501003	705010078.5.d0032.ipe032.gp18	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501004	705010078.5.d0032.ipe032.gp19	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501005	705010078.5.d0032.ipe032.gp20	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501006	705010078.5.d0032.ipe032.gp21	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501007	705010078.5.d0032.ipe032.gp23	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501008	705010078.5.d0032.ipe032.gp24	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501009	705010078.5.d0032.ipe032.gp25	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501010	705010078.5.d0032.ipe032.gp26	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501011	705010078.5.d0032.ipe032.gp28	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501012	705010078.5.d0032.ipe032.gp29	South Africa	2007		genomic RNA		subtype: C	1	231	6L,21S,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501013	705010078.5.d0032.ipe032.gp6	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501014	705010078.5.d0032.ipe032.gp8	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501015	705010078.5.d0032.ipe032.gp9	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501017	705010078.5.d0039.ipe032.gp15	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501018	705010078.5.d0039.ipe032.gp17	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501019	705010078.5.d0039.ipe032.gp18	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501020	705010078.5.d0039.ipe032.gp19	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501021	705010078.5.d0039.ipe032.gp20_	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501022	705010078.5.d0039.ipe032.gp24	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83T,116A,120S,124V,148V,169F,178T,187D,203R,208G,229K
MF501023	705010078.5.d0039.ipe032.gp27_	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501024	705010078.5.d0039.ipe032.gp4	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501025	705010078.5.d0039.ipe032.gp5	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501026	705010078.5.d0039.ipe032.gp8	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501027	705010078.5.d0046.ipe032.gp1	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501029	705010078.5.d0046.ipe032.gp11	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501030	705010078.5.d0046.ipe032.gp16	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501031	705010078.5.d0046.ipe032.gp17	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501032	705010078.5.d0046.ipe032.gp18	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501033	705010078.5.d0046.ipe032.gp19	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501034	705010078.5.d0046.ipe032.gp2	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,203R,208G,229K
MF501035	705010078.5.d0046.ipe032.gp20_	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,203R,208G,229K
MF501036	705010078.5.d0046.ipe032.gp22	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501037	705010078.5.d0046.ipe032.gp23_	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501038	705010078.5.d0046.ipe032.gp4	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,203R,208G,229K
MF501039	705010078.5.d0046.ipe032.gp8_a	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,203R,208G,229K
MF501040	705010078.5.d0046.ipe032.gp9	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501041	705010078.5.d0053.ipe032.gp1	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501042	705010078.5.d0053.ipe032.gp10	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501043	705010078.5.d0053.ipe032.gp11	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,203R,208G,229K
MF501044	705010078.5.d0053.ipe032.gp12	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501045	705010078.5.d0053.ipe032.gp16	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,203R,208G,229K
MF501046	705010078.5.d0053.ipe032.gp17	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501047	705010078.5.d0053.ipe032.gp2	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,203R,208G,229K
MF501048	705010078.5.d0053.ipe032.gp4	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501050	705010078.5.d0053.ipe032.gp6	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501051	705010078.5.d0053.ipe032.gp7	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,203R,208G,229K
MF501052	705010078.5.d0060.ipe032.gp11	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,203R,208G,229K
MF501053	705010078.5.d0060.ipe032.gp12	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,203R,208G,229K
MF501054	705010078.5.d0060.ipe032.gp18	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,203R,208G,229K
MF501055	705010078.5.d0060.ipe032.gp19_	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501056	705010078.5.d0060.ipe032.gp4	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,203R,208G,229K
MF501057	705010078.5.d0060.ipe032.gp5	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501058	705010078.5.d0060.ipe032.gp6	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,203R,208G,229K
MF501059	705010078.5.d0060.ipe032.gp7	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,203R,208G,229K
MF501060	705010078.5.d0060.ipe032.gp8	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,203R,208G,229K
MF501061	705010078.5.d0060.ipe032.gp9	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,203R,208G,229K
MF501062	705010078.5.d0088.ipe032.br.gp	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,203R,208G,229K
MF501063	705010078.5.d0088.ipe032.br.gp	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501064	705010078.5.d0088.ipe032.br.gp	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501065	705010078.5.d0088.ipe032.br.gp	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83T,116A,120S,124V,148V,169F,178T,187D,203R,208G,229K
MF501066	705010078.5.d0088.ipe032.br.gp	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501067	705010078.5.d0088.ipe032.br.gp	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501068	705010078.5.d0088.ipe032.br.gp	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,203R,208G,229K
MF501069	705010078.5.d0088.ipe032.br.gp	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,128K,148V,169F,178T,187D,203R,208G,229K
MF501070	705010078.5.d0145.ipe032.gp1	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501071	705010078.5.d0145.ipe032.gp11	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501072	705010078.5.d0145.ipe032.gp12	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,203R,208G,229K
MF501073	705010078.5.d0145.ipe032.gp14_	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,163DG,169F,178T,187D,200N,203R,208G,229K
MF501074	705010078.5.d0145.ipe032.gp18_	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200NT,203R,208G,229K
MF501075	705010078.5.d0145.ipe032.gp19	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501076	705010078.5.d0145.ipe032.gp2	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501077	705010078.5.d0145.ipe032.gp22_	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83T,116A,120S,124V,148V,169F,178T,187D,203R,208G,229K
MF501078	705010078.5.d0145.ipe032.gp24_	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501079	705010078.5.d0145.ipe032.gp4	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,203R,208G,229K
MF501080	705010078.5.d0145.ipe032.gp7	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83T,116A,120S,124V,148V,169F,178T,187D,203R,208G,229K
MF501081	705010078.5.d0145.ipe032.gp9	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501086	705010078.5.d0208.ipe032.gp1_a	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83T,116A,120S,124V,148V,169F,178T,187D,189LMV,203R,208G,229K
MF501082	705010078.5.d0208.ipe032.gp10	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501083	705010078.5.d0208.ipe032.gp11	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83T,116A,120S,124V,148V,169F,178T,187D,203R,208G,229K
MF501084	705010078.5.d0208.ipe032.gp12_	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83T,116A,120S,124V,148V,169F,178T,187D,203R,208G,229K
MF501085	705010078.5.d0208.ipe032.gp14	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501087	705010078.5.d0208.ipe032.gp2	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501088	705010078.5.d0208.ipe032.gp3_a	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83T,116A,120S,124V,148V,169F,178T,187D,203R,208G,229K
MF501089	705010078.5.d0208.ipe032.gp4__	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83T,116A,120S,124V,148V,169F,178T,187D,203R,208G,229K
MF501090	705010078.5.d0208.ipe032.gp6	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83T,116A,120S,124V,148V,169F,178T,187D,203R,208G,229K
MF501091	705010078.5.d0208.ipe032.gp8	South Africa	2007		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83T,116A,120S,124V,148V,169F,178T,187D,203R,208G,229K
MF501092	705010078.5.d0453.ipe032.gp10_	South Africa	2008		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501093	705010078.5.d0453.ipe032.gp11	South Africa	2008		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,200N,203R,208G,229K
MF501094	705010078.5.d0453.ipe032.gp12_	South Africa	2008		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,203R,208G,229K
MF501095	705010078.5.d0453.ipe032.gp13	South Africa	2008		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,203R,208G,229K
MF501096	705010078.5.d0453.ipe032.gp14	South Africa	2008		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,203R,208G,229K
MF501097	705010078.5.d0453.ipe032.gp4_a	South Africa	2008		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,203R,208G,229K
MF501098	705010078.5.d0453.ipe032.gp5	South Africa	2008		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,169F,178T,187D,203R,208G,229K
MF501099	705010078.5.d0453.ipe032.gp6	South Africa	2008		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83T,116A,120S,124V,148V,169F,178T,187D,203R,208G,229K
MF501100	705010078.5.d0453.ipe032.gp7	South Africa	2008		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83I,116A,120S,124V,148V,163G,169F,178T,187D,200N,203R,208G,229K
MF502229	CH1754.5.d0014.ipe021_01	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,59X,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502230	CH1754.5.d0014.ipe021_012	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502231	CH1754.5.d0014.ipe021_013	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502232	CH1754.5.d0014.ipe021_014	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502233	CH1754.5.d0014.ipe021_015	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502234	CH1754.5.d0014.ipe021_016	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502235	CH1754.5.d0014.ipe021_018	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502236	CH1754.5.d0014.ipe021_019	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502237	CH1754.5.d0014.ipe021_020	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502238	CH1754.5.d0014.ipe021_021	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502239	CH1754.5.d0014.ipe021_022	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502240	CH1754.5.d0014.ipe021_023	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502241	CH1754.5.d0014.ipe021_024	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502242	CH1754.5.d0014.ipe021_025	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502243	CH1754.5.d0014.ipe021_026	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502244	CH1754.5.d0014.ipe021_027	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502245	CH1754.5.d0014.ipe021_028	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502246	CH1754.5.d0014.ipe021_029	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502247	CH1754.5.d0014.ipe021_030	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502248	CH1754.5.d0014.ipe021_031	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502249	CH1754.5.d0014.ipe021_032	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502250	CH1754.5.d0014.ipe021_033	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502251	CH1754.5.d0014.ipe021_034	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502252	CH1754.5.d0014.ipe021_035	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502253	CH1754.5.d0014.ipe021_036	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502254	CH1754.5.d0014.ipe021_037	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502255	CH1754.5.d0014.ipe021_038	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,135N,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502256	CH1754.5.d0014.ipe021_039	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502257	CH1754.5.d0014.ipe021_04	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502258	CH1754.5.d0014.ipe021_040	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502259	CH1754.5.d0014.ipe021_043	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502260	CH1754.5.d0014.ipe021_044	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502261	CH1754.5.d0014.ipe021_045	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502262	CH1754.5.d0014.ipe021_046	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502263	CH1754.5.d0014.ipe021_047	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502264	CH1754.5.d0014.ipe021_048	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91A,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502265	CH1754.5.d0014.ipe021_05	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502266	CH1754.5.d0014.ipe021_050	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502267	CH1754.5.d0014.ipe021_051	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502268	CH1754.5.d0014.ipe021_052	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502269	CH1754.5.d0014.ipe021_053	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502270	CH1754.5.d0014.ipe021_054	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502271	CH1754.5.d0014.ipe021_055	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,126A,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502272	CH1754.5.d0014.ipe021_058	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502273	CH1754.5.d0014.ipe021_06	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502274	CH1754.5.d0014.ipe021_07	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502275	CH1754.5.d0014.ipe021_08	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502276	CH1754.5.d0014.ipe021_09	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502277	CH1754.5.d0014.ipe021_11	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502278	CH1754.5.d0014.ipe021_14	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502279	CH1754.5.d0014.ipe021_17	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502280	CH1754.5.d0014.ipe021_21	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502281	CH1754.5.d0014.ipe021_24	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502282	CH1754.5.d0014.ipe021_26	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502283	CH1754.5.d0014.ipe021_28	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502284	CH1754.5.d0014.ipe021_3	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502285	CH1754.5.d0014.ipe021_30	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502286	CH1754.5.d0014.ipe021_31	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502287	CH1754.5.d0014.ipe021_33_ambco	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,144I,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502288	CH1754.5.d0014.ipe021_35	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502289	CH1754.5.d0014.ipe021_37	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502290	CH1754.5.d0014.ipe021_39	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502291	CH1754.5.d0014.ipe021_4	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502292	CH1754.5.d0014.ipe021_41	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502293	CH1754.5.d0014.ipe021_42	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502294	CH1754.5.d0014.ipe021_45	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502295	CH1754.5.d0014.ipe021_60	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502296	CH1754.5.d0014.ipe021_63	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502297	CH1754.5.d0014.ipe021_64	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502298	CH1754.5.d0014.ipe021_65	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502299	CH1754.5.d0014.ipe021_69	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502300	CH1754.5.d0014.ipe021_71	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,57S,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502301	CH1754.5.d0014.ipe021_74	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502302	CH1754.5.d0014.ipe021_75	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502303	CH1754.5.d0014.ipe021_76	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502304	CH1754.5.d0014.ipe021_9	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502305	CH1754.5.d0035.ipe021_10	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502306	CH1754.5.d0035.ipe021_12	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502307	CH1754.5.d0035.ipe021_13	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502308	CH1754.5.d0035.ipe021_15	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502309	CH1754.5.d0035.ipe021_19	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502310	CH1754.5.d0035.ipe021_2	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502311	CH1754.5.d0035.ipe021_21	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502312	CH1754.5.d0035.ipe021_22	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502313	CH1754.5.d0035.ipe021_23	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502314	CH1754.5.d0035.ipe021_24	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502315	CH1754.5.d0035.ipe021_25	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502316	CH1754.5.d0035.ipe021_26	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502317	CH1754.5.d0035.ipe021_27	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502318	CH1754.5.d0035.ipe021_28	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502319	CH1754.5.d0035.ipe021_29	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502320	CH1754.5.d0035.ipe021_31	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502321	CH1754.5.d0035.ipe021_33	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502322	CH1754.5.d0035.ipe021_34	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502323	CH1754.5.d0035.ipe021_35	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502324	CH1754.5.d0035.ipe021_36	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502325	CH1754.5.d0035.ipe021_37	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,185T,187D,203R,204G,207Q,208G
MF502326	CH1754.5.d0035.ipe021_38	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502327	CH1754.5.d0035.ipe021_39	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502328	CH1754.5.d0035.ipe021_5	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502329	CH1754.5.d0077.ipe021_10	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502330	CH1754.5.d0077.ipe021_11	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502331	CH1754.5.d0077.ipe021_12	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502332	CH1754.5.d0077.ipe021_13	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502333	CH1754.5.d0077.ipe021_14	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502334	CH1754.5.d0077.ipe021_15	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502335	CH1754.5.d0077.ipe021_16	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502336	CH1754.5.d0077.ipe021_18	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502337	CH1754.5.d0077.ipe021_19	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502338	CH1754.5.d0077.ipe021_20	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502339	CH1754.5.d0077.ipe021_22	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502340	CH1754.5.d0077.ipe021_24	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502342	CH1754.5.d0077.ipe021_28	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502343	CH1754.5.d0077.ipe021_29	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502344	CH1754.5.d0077.ipe021_3	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502345	CH1754.5.d0077.ipe021_30	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502346	CH1754.5.d0077.ipe021_31	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502347	CH1754.5.d0077.ipe021_32	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502348	CH1754.5.d0077.ipe021_33	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502349	CH1754.5.d0077.ipe021_4	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502350	CH1754.5.d0077.ipe021_5	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502351	CH1754.5.d0077.ipe021_6	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502352	CH1754.5.d0133.ipe021_1	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502353	CH1754.5.d0133.ipe021_11	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502354	CH1754.5.d0133.ipe021_12	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502355	CH1754.5.d0133.ipe021_13	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502356	CH1754.5.d0133.ipe021_14	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502357	CH1754.5.d0133.ipe021_17	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502358	CH1754.5.d0133.ipe021_18	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502359	CH1754.5.d0133.ipe021_19	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502360	CH1754.5.d0133.ipe021_2	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502361	CH1754.5.d0133.ipe021_20	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502362	CH1754.5.d0133.ipe021_22	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502363	CH1754.5.d0133.ipe021_24	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502364	CH1754.5.d0133.ipe021_27	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502365	CH1754.5.d0133.ipe021_28	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502366	CH1754.5.d0133.ipe021_29	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502367	CH1754.5.d0133.ipe021_3	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502368	CH1754.5.d0133.ipe021_31	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502369	CH1754.5.d0133.ipe021_32	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502370	CH1754.5.d0133.ipe021_34	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502371	CH1754.5.d0133.ipe021_35	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502372	CH1754.5.d0133.ipe021_4	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502373	CH1754.5.d0133.ipe021_5	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502374	CH1754.5.d0133.ipe021_6	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502375	CH1754.5.d0133.ipe021_8	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,152N,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502376	CH1754.5.d0133.ipe021_9	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502377	CH1754.5.d0189.ipe021_1	Malawi	2011		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,86I,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502378	CH1754.5.d0189.ipe021_10	Malawi	2011		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502379	CH1754.5.d0189.ipe021_11	Malawi	2011		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502380	CH1754.5.d0189.ipe021_12	Malawi	2011		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502381	CH1754.5.d0189.ipe021_13	Malawi	2011		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502382	CH1754.5.d0189.ipe021_14	Malawi	2011		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502383	CH1754.5.d0189.ipe021_15	Malawi	2011		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502384	CH1754.5.d0189.ipe021_16	Malawi	2011		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,78T,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502385	CH1754.5.d0189.ipe021_18	Malawi	2011		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502386	CH1754.5.d0189.ipe021_2	Malawi	2011		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502387	CH1754.5.d0189.ipe021_20	Malawi	2011		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502388	CH1754.5.d0189.ipe021_21	Malawi	2011		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502389	CH1754.5.d0189.ipe021_23	Malawi	2011		genomic RNA		subtype: C	1	231	14S,27I,41T,47T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502390	CH1754.5.d0189.ipe021_24	Malawi	2011		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502391	CH1754.5.d0189.ipe021_25	Malawi	2011		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502392	CH1754.5.d0189.ipe021_26	Malawi	2011		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502393	CH1754.5.d0189.ipe021_27	Malawi	2011		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502394	CH1754.5.d0189.ipe021_29	Malawi	2011		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502395	CH1754.5.d0189.ipe021_3	Malawi	2011		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G,231F
MF502396	CH1754.5.d0189.ipe021_30	Malawi	2011		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502397	CH1754.5.d0189.ipe021_31	Malawi	2011		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,191I,203R,204G,207Q,208G
MF502398	CH1754.5.d0189.ipe021_32	Malawi	2011		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502399	CH1754.5.d0189.ipe021_33	Malawi	2011		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502400	CH1754.5.d0189.ipe021_34	Malawi	2011		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502401	CH1754.5.d0189.ipe021_36	Malawi	2011		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502402	CH1754.5.d0189.ipe021_39	Malawi	2011		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502403	CH1754.5.d0189.ipe021_4	Malawi	2011		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502404	CH1754.5.d0189.ipe021_5	Malawi	2011		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502405	CH1754.5.d0189.ipe021_6	Malawi	2011		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502406	CH1754.5.d0189.ipe021_7	Malawi	2011		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502407	CH1754.5.d0189.ipe021_8	Malawi	2011		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502408	CH1754.5.d0189.ipe021_9	Malawi	2011		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502409	CH1754.5.w3.11_f	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502410	CH1754.5.w3.17_e	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502411	CH1754.5.w3.21_c	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502412	CH1754.5.w3.31_d	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G
MF502413	CH1754.5.w3.39_a	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502415	CH1754.5.w3.4_b	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,204G,207Q,208G
MF502414	CH1754.5.w3.42_g	Malawi	2010		genomic RNA		subtype: C	1	231	14S,27I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,136M,148V,154K,169F,171A,178T,180D,187D,203R,204G,207Q,208G