<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Treurnicht (2010) Adaptive changes in HIV-1 subtype C proteins during early infection are driven by changes in HLA-associated immune pressure Virology 396 (2), 213-225 (2010) 5.2e-149 20          

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AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
GQ999981CAP174.4wSouth Africa04-Oct-2005genomic DNAplasmasubtype: C12316L,27I,41T,71D,83L,91V,116A,118I,120G,148V,154K,169F,178T,180D,187D,203R,208G
GQ999982CAP206.8w.F1South Africa12-Jul-2005genomic DNAplasmasubtype: C12316L,12R,27I,41T,71D,83L,87P,91P,96L,98D,116A,120H,124V,128G,136M,148V,153T,169F,178T,187D,200S,208G
GQ999983CAP210.5wSouth Africa25-May-2005genomic DNAplasmasubtype: C12316H,27I,41T,71D,83T,116A,148V,154K,169F,178T,180D,187D,203R,208G
GQ999984CAP228.8w.F2South Africa18-May-2005genomic DNAplasmasubtype: C12316L,14P,15L,27I,31S,41T,71D,83L,91V,110N,116A,120S,128D,148V,169F,178T,180D,187D,203R,208G,225S
GQ999985CAP229.7wSouth Africa19-Jul-2005genomic DNAplasmasubtype: C12316L,27I,41T,71D,96I,116A,128D,148V,169F,178T,180D,187D,203R,208G
GQ999991CAP239.5w.F1South Africa10-Aug-2005genomic DNAplasmasubtype: C12316L,27I,36I,41T,71D,83L,87Q,91V,115V,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
GQ999986CAP244.8w.F1South Africa23-May-2005genomic DNAplasmasubtype: C12316L,27I,41T,71D,83L,91V,116N,120A,128D,148V,154K,169F,178T,180D,187D,191I,203R,208G
GQ999987CAP248.9wSouth Africa24-May-2005genomic DNAplasmasubtype: C12316L,27I,41T,71D,83L,93A,116A,120G,124V,148V,169F,178T,203R,227E
GQ999988CAP255.8w.F1South Africa21-Jun-2005genomic DNAplasmasubtype: C12316L,14P,15L,27I,31S,41T,71D,83L,112A,116A,118I,135V,148V,154K,169F,178T,187D,200S,203R,208G
GQ999989CAP256.6wSouth Africa05-Sep-2005genomic DNAplasmasubtype: C12316L,27I,41T,71D,83T,96I,116A,128D,134M,148V,169F,178T,180D,203R,204G,207Q,208G,213G,225S
GQ999990CAP257.7w.F1South Africa12-Sep-2005genomic DNAplasmasubtype: C12316L,15L,27I,41T,71D,83L,91A,92P,116A,120G,124V,128D,148V,169F,178T,187D,203R,207Q,208G
GQ999973CAP30.5w.F4South Africa27-Oct-2004genomic DNAplasmasubtype: C123127I,41T,48I,71D,83I,91V,96L,116A,124V,128D,148V,154K,169F,171I,178T,187D,203R,204G,207S,208G
GQ999974CAP45.5w.F1South Africa11-May-2005genomic DNAplasmasubtype: C12316L,14P,15M,27I,41T,56F,71D,83L,87Q,91V,116A,118I,120G,148V,154K,163E,169F,178T,180D,187D,207T,208G,225S
GQ999975CAP61.8w.F3South Africa20-Dec-2004genomic DNAplasmasubtype: C12316A,14P,15L,27I,41T,71D,83L,87Q,91V,96I,110N,116A,120H,148V,154K,169F,178T,180D,187D,203R,208G,225S
GQ999976CAP63.5w.F4South Africa26-Jan-2005genomic DNAplasmasubtype: C12316L,14N,15L,27I,31G,33N,41T,71D,91V,120H,128D,148V,154K,169F,175G,178T,180D,187D,203R,208G,210S,225S
GQ999977CAP65.6wSouth Africa06-Sep-2005genomic DNAplasmasubtype: C12316L,14S,15L,27I,41T,71D,116A,120S,124V,148V,154K,169F,178T,180D,187D,203R,208G,210S
GQ999972CAP8.3w.F2South Africa17-May-2005genomic DNAplasmasubtype: C12316L,27I,31G,33N,41T,71D,83L,91V,115V,120S,128D,148V,154K,160S,169F,178T,187D,200S,203R,208G,225S
GQ999978CAP84.3w.F2South Africa28-Feb-2005genomic DNAplasmasubtype: C12316L,27I,41T,71D,91V,116A,120G,124V,148V,169F,178T,180D,210S,225S
GQ999979CAP85.5w.F1South Africa22-Jun-2005genomic DNAplasmasubtype: C123114P,15L,27I,41T,71D,83I,91V,96L,110N,116A,120A,124V,148V,154K,169F,178T,187D,203R,208G
GQ999980CAP88.5w.F2South Africa17-Feb-2005genomic DNAplasmasubtype: C12316P,13H,14P,27I,31G,41T,49S,50H,71D,83L,91N,92P,110N,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,207S,208G,225S

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