<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
de Silva (2018) HLA-associated polymorphisms in the HIV-2 capsid highlight key differences between HIV-1 and HIV-2 immune adaptation AIDS (2018) In press 1.02e-164 56 56 Naive Plasma Direct PCR NonM, HIV2, SIV

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AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
MG60426960525Guinea-Bissaugenomic RNA12316A,11I,15M,27I,54M,58I,71D,79D,83T,92P,110N,120S,148V,154K,169F,183H,203R,208G
MG60427761701Guinea-Bissaugenomic RNA12316A,11T,14P,15M,27I,41T,54M,58I,71D,83T,92P,120S,124V,135V,148V,149C,169F,178T,180D,203R
MG60424062042Guinea-Bissaugenomic RNA12316A,11I,14S,27I,54M,58I,71D,92P,120S,124V,135V,148V,160S,169F,180D,203R
MG604241CA5006Guinea-Bissaugenomic RNA12316A,14S,15M,27I,41T,54M,58I,71D,75D,83L,87Q,92P,96L,120S,124V,129V,131R,135V,148V,154K,169F,178T,199R,200S,203R,210P,225S
MG604273CA5031Guinea-Bissaugenomic RNA12316A,14S,27I,41T,54M,58I,71D,83T,92P,120S,124V,131R,135V,169F,199R,200A,203R
MG604278CA5050Guinea-Bissaugenomic RNA12316A,11T,14S,15M,27I,41T,54M,58I,71D,75D,83T,87Q,92P,110N,120S,135V,148V,169F,178T,200S,203R
MG604290CA5055Guinea-Bissaugenomic RNA12316A,14P,27I,54M,58I,71D,83I,92P,120S,135V,148V,169F,171V,178T,180D,200N,203R,225S
MG604250CA5080Guinea-Bissaugenomic RNA12312V,6A,14P,15M,26A,27I,41T,54M,58I,75D,92P,110N,116A,120G,123A,135V,148V,180D,203R,204G,208G
MG604291CA5171Guinea-Bissaugenomic RNA12316A,14P,54M,58I,71D,72A,78V,83T,92P,120S,135V,148V,169F,171A,178T,180D,200S,203R,225S
MG604288CA5246Guinea-Bissaugenomic RNA12316A,11I,14P,27I,33N,48A,54M,58V,71D,83T,92P,94N,120S,124V,131R,148V,169F,171C,177G,178T,190M,203R,204G,208G,225S
MG604281CA5380Guinea-Bissaugenomic RNA12316A,14S,15M,27I,41T,54M,58I,71D,87Q,92P,96I,120S,124V,135V,154K,169F,178T,200S,203R,208G
MG604243CA5452Guinea-Bissaugenomic RNA12316A,14S,27I,41T,54M,58I,71D,92P,120S,124V,135V,148V,169F,178T,199R,200S
MG604262CA5463Guinea-Bissaugenomic RNA12316A,10L,15V,27I,41T,54V,58I,71D,83A,92P,120S,124V,132K,169F,178T,203R,208G,225S
MG604265CA5535Guinea-Bissaugenomic RNA12313M,6A,11T,12Y,15M,27I,41T,54M,58I,71D,92P,111P,120G,135V,148V,169F,171A,178T,180D,200G,207S,208G
MG604267CA5570Guinea-Bissaugenomic RNA12316A,11T,14P,27I,41A,54M,58I,71D,79D,83T,92P,110N,120S,124V,132K,148V,169F,178T,183S,203R
MG604249CA5657Guinea-Bissaugenomic RNA12316A,14S,15M,27I,41T,54M,58I,71D,91A,120S,135V,169F,178T,200A,203R,207T,208G
MG604264CA5696Guinea-Bissaugenomic RNA12316A,11I,14S,15M,27I,41T,54M,58I,71D,72V,87Q,92P,115V,120S,128D,132K,135V,136M,139H,154K,169F,178T,203R,208G
MG604251CA5755Guinea-Bissaugenomic RNA12316A,14S,27I,41T,54M,58I,83T,87Q,92P,110N,120S,135V,148V,180D,201L,208G
MG604247CA5795Guinea-Bissaugenomic RNA12316A,14S,15M,27I,41T,54M,58I,71D,83T,92P,116A,120S,124V,128D,148V,149G,154K,169F,178T,183H,203R,208G
MG604255CA5796Guinea-Bissaugenomic RNA12316A,11T,14S,15L,27I,54M,58I,71D,75D,83T,92P,120S,135V,148V,169F,178T,191I,210S,217S
MG604276CA5842Guinea-Bissaugenomic RNA12316A,14S,27I,41T,54M,58I,71D,83T,92P,120S,124V,135V,148V,169F,170R,178T,180D,203R,208G,225S
MG604248CA5848Guinea-Bissaugenomic RNA12316A,14S,27I,54M,58I,71D,83T,87Q,91V,92P,107S,120S,124V,135V,148V,154K,169F,178T,183S,200S,203R,208G,211I,225S
MG604289CA5920Guinea-Bissaugenomic RNA12316A,11I,14S,15M,27I,41T,54M,58I,71D,83T,92P,120S,124V,135V,148V,169F,178T,180D,203R,208G,225S,230I
MG604282CA5978Guinea-Bissaugenomic RNA12316A,14S,15M,27I,54M,58I,71D,83I,87Q,92P,96I,116T,120S,135V,169F,178T,183G,203R,207Q,208G
MG604257CA6006Guinea-Bissaugenomic RNA12316A,11T,14P,26A,41T,54M,58I,71D,92P,120S,135V,148V,169F,178T,200S,203R,210S
MG604258CA6025Guinea-Bissaugenomic RNA12316A,11T,14P,15M,26A,27I,41T,54M,58I,71D,92P,110N,120S,135V,148V,169F,178T,200S,203R,208G,210S
MG604259CA6026Guinea-Bissaugenomic RNA12316A,11T,26A,41T,54M,58I,71D,92P,120S,135V,148V,169F,178T,200S,203R,208G,210S
MG604274CA6042Guinea-Bissaugenomic RNA12316A,14S,15M,27I,41T,54M,58I,71D,83T,92P,120S,124V,135V,169F,178T,180D,203R,208G
MG604244CA6128Guinea-Bissaugenomic RNA12316A,14S,15M,27I,41T,54M,58I,71D,92P,110N,120S,124V,135V,148V,169F,178T,200S,225S
MG604268CA6482Guinea-Bissaugenomic RNA12316A,11T,14S,26A,27I,41T,54M,58V,71D,96I,115M,116A,120S,135V,148V,154K,169F,178T,183G,200S,203R,208G,225S
MG604280CA6591Guinea-Bissaugenomic RNA12316A,14S,15M,27I,54M,58I,71D,87Q,91V,92P,98D,110N,120S,148V,169F,178T,187D,200S,203R,208G
MG604252CA6922Guinea-Bissaugenomic RNA12316A,14P,27I,41T,54M,58I,87Q,92P,120S,135V,148V,178T,201L
MG604245CA6924Guinea-Bissaugenomic RNA12316A,14S,15M,27I,41T,54M,58I,71D,79D,83Q,91V,92P,120S,124V,135V,148V,154K,169F,180D,203R,208G,210S
MG604254CA6952Guinea-Bissaugenomic RNA12316A,14P,27I,41T,54M,58I,75D,92P,120S,135V,148V,178T,201L,208Q
MG604256CA6958Guinea-Bissaugenomic RNA12316A,14S,27I,54M,58I,71D,79D,83T,92P,120S,124V,148V,169F,178T,187D,201L,208G
MG604246CA6983Guinea-Bissaugenomic RNA12316A,14P,15M,27I,41T,54M,58I,71D,83I,92P,110N,120S,124V,135V,148V,154K,169F,178T,180D,203R
MG604260CA7114Guinea-Bissaugenomic RNA12316A,11T,14P,41T,54M,58I,71D,92P,120S,124V,135V,148V,169F,178T,180D,203R
MG604286CA7225Guinea-Bissaugenomic RNA12316A,14S,15M,27I,54M,58I,71D,79D,91V,92P,110N,120S,124V,131R,148V,154K,169F,171C,178T,183G,200S,203R,207T,208G
MG604272CA7298Guinea-Bissaugenomic RNA12316A,11T,14P,27I,54M,58I,68I,71D,78V,87Q,92P,96I,120S,135V,148V,169F,178T,180P,203R,207A,208G
MG604261CA7361Guinea-Bissaugenomic RNA12316A,11I,14S,41T,54M,58I,71D,92P,106R,109N,113D,120S,124V,135V,148V,169F,178T,180D,203R,208G
MG604271CA7367Guinea-Bissaugenomic RNA12316A,11T,14S,15M,26A,27I,54M,58I,87Q,92P,120S,148V,169F,171A,178T,180D,183A,200A,207T,208G,225S
MG604238CA7424Guinea-Bissaugenomic RNA12316A,14S,27I,54M,58I,71D,83T,92P,120S,135V,148V,169F,178T,203R,204G,208G
MG604283CA7578Guinea-Bissaugenomic RNA12316A,14S,15M,27I,54M,58I,71D,87Q,92P,110N,120S,135V,148V,169F,178T,203R,204G,208G
MG604275CA7582Guinea-Bissaugenomic RNA12316A,14S,15M,27I,54M,58I,71D,92P,120S,135V,169F,178T,199R,200A,203R,208G,209G,225S
MG604242CA7650Guinea-Bissaugenomic RNA12316A,14S,15M,27I,41T,54M,58I,71D,75D,92P,120S,124V,135V,146C,154K,160S,169F,178T
MG604263CA7743Guinea-Bissaugenomic RNA12316A,10L,15V,27I,41T,54V,58I,71D,83I,92P,120S,124V,132K,169F,203R,208G,225S
MG604292N101Guinea-Bissaugenomic RNA12316A,14P,15M,27I,41T,54M,58I,71D,87Q,110N,120S,135V,148V,169F,178T,180D,203R,208G
MG604239N134Guinea-Bissaugenomic RNA12316A,11I,14S,15L,27I,54M,58I,71D,92P,120S,135V,148V,169F,170R,171V,178T,200S,207S,208G
MG604284N159Guinea-Bissaugenomic RNA12316A,14S,15M,27I,54M,58I,71D,92P,120G,124V,131R,148V,169F,171C,178T,180D,203R,204G,207T,208G
MG604266N196Guinea-Bissaugenomic RNA12316A,14P,15M,27I,41T,54M,58I,71D,92P,110N,120S,135V,148V,169F,178T,180D,203R,208G
MG604285N197Guinea-Bissaugenomic RNA12316A,14S,27I,54M,58I,71D,92P,102G,120G,124V,131R,148I,154K,169F,171C,178T,180D,203R,204G,207T,208G
MG604287N221Guinea-Bissaugenomic RNA12316A,14S,27I,54M,58I,71D,83I,92P,110N,120S,124V,128D,131R,148V,154K,169F,178T,180D,200S,203R,208G
MG604279N222Guinea-Bissaugenomic RNA12316A,10W,11T,14S,27I,50E,54M,58I,71D,92Q,110N,120S,169F,178T,203R,208G
MG604270N246Guinea-Bissaugenomic RNA12316A,11T,14P,15M,27I,54M,58I,71D,92P,120S,146K,148A,167K,169F,178T,200A,208G
MG604253N253Guinea-Bissaugenomic RNA12316A,14P,27I,41T,54M,58I,75D,87Q,92P,110N,120S,135V,148V,178T,201L
MG604293N65559Guinea-Bissaugenomic RNA22312P,5Q,7G,9N,10Y,11T,13V,14P,15L,26L,31K,33G,34A,37V,39G,41Q,47C,50Y,52I,54Q,58C,61D,68I,69I,70R,72I,79D,82V,83Q,86I,87X,88X,91L,92P,93A,96L,111V,112D,116Q,119F,120R,120R_P,121Q,122N,124V,128N,131R,135Q,136I,139Q,141C,145H,146N,149N,154K,162Q,163S,171S,177T,178D,179P,180A,187Q,200L,201V,204G,207I,208N,209P,215L,226Q,230L,231M

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