<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb
#PtsARTSourceCloningStudyType
Kiepiela (2005) Dominant influence of HLA-B in mediating the potential co-evolution of HIV and HLA Nature. 2004 Dec 9;432(7018):769-75 3.7e-163 225 150 Naive Plasma; PBMC Direct PCR; Molecular clones HLA

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AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
AY8385691003MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316V,27I,41T,71D,83L,91V,96L,116A,124V,128D,148V,154K,169F,171V,178T,180D,203R
AY8385701029MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,27I,41T,45D,54A,71D,83L,116A,128D,148V,154K,169F,178T,187D,203R,208G,210S
AY8569841040437Australiagenomic DNAderived by direct sequencing from bulk PCRamplification2323183L,110N,120H
AY8385811048MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,27I,41T,71D,83L,96L,116A,124V,128D,148V,169F,178T,180D,187D,203R,208G
AY8385921051MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,27I,41T,71D,83L,116A,120S,128D,148V,169F,178T,180D,187D,203R,208G,230M
AY8386031058MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,27I,41T,71D,83L,116A,124V,128D,148V,169F,178T,187D,203R,208G,210S
AY8386141060MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,27I,41T,54S,68I,71D,83L,91V,98D,115V,116A,120G,123A,124V,128D,131R,148V,169F,178T,180D,187D,203R,208G,225S
AY8386251063MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,11I,15L,27I,41T,71D,83L,86A,87Q,91L,92P,96I,110N,116T,148V,169F,170R,178T,180D,187D,203R,208G,210S
AY8385671069MBSouth Africa: Durbangenomic RNAfrom heterosexual female patient 1069MBwho attended a prenatal clinicsubtype: C12316L,27I,41T,71D,83L,91V,116A,120G,128D,148V,154K,169F,177S,178T,187D,203R,207S,208G
AY8386361073MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,14P,15L,27I,41T,71D,83L,86A,87Q,91Y,92P,93A,96I,116A,120G,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
AY8386381081MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C123127I,41T,59I,71D,83L,91V,96LM,111P,116A,120HN,124V,128D,148V,154K,169F,178T,180D,187D,191I,203R,208G
AY8386391093MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,14P,27I,41T,71D,91V,110N,116A,120A,128D,148V,169F,178T,180D,187D,208G,210S
AY8385711114MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316A,27I,41T,71D,83L,116A,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
AY8385721116MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C123127I,41T,71D,83L,96L,116A,124V,128D,148V,154K,169F,171C,178T,180D,187D,203R,210S,225S
AY8385731117MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,14AITV,15IM,27I,41T,50S,71D,83L,91V,116A,120S,124V,128D,148V,169F,178T,180D,187D,203R,208G,225S
AY8385741118MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,27I,36I,41T,71D,83L,87Q,91P,96L,116A,120H,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
AY8385751122MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,27I,41T,71D,83L,91A,116A,120G,124V,128D,148V,169F,178T,180D,203R,208G
AY8385761132MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,27I,41T,71D,91V,116A,120G,124V,148V,154K,169F,178T,180D,187D,200I,203R,204G,208G,225S
AY8385771133MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,15IL,27I,41T,71D,75D,92Q,116A,120G,128D,148V,169F,171A,178T,180D,187D,207S,208G
AY8385781137MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,27I,41T,71D,116A,120S,128D,148V,169F,170R,178T,180D,187D,203R,204G,207Q,208G
AY8385791138MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,27I,41T,71D,87Q,91V,96I,116T,120S,124M,128D,148V,169F,178T,180D,203R,208G
AY8385801140MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12312V,6L,15L,27I,41T,71D,116T,120S,148V,169F,187D,203R,208G,225S
AY8385821148MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,18KR,27I,41T,71D,83L,96L,116A,124V,128D,148V,154K,169F,171V,178T,180D,203R,210S
AY8385831152MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316M,14P,17A,41T,71D,83L,91V,116A,124V,128DE,148V,169F,178T,180D,187D,200I,204G,208G,210S,225S
AY8385841153MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,27I,41T,71D,83T,105S,116A,120S,124V,128D,148V,153IV,154K,169F,171IT,178T,180D,203R,208G,210S,211I,225S
AY8385851158MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12313G,6L,14N,27I,41T,71D,83L,96L,116A,124V,128D,148V,169F,178T,180D,203R,208G,210S
AY8569851160428Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,14P,17PR,27I,79D,83L,148V,180D,225S,230I
AY8385861160MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,27I,41T,54S,58A,71D,83L,116A,118I,120G,134V,148V,169F,178T,180D,187D,203R,208G,210S,225S,228AT
AY8385871173MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,27I,36IV,41T,71D,83L,91N,96IM,116A,120S,128D,148V,154K,169F,178T,180D,203R,210S,225S
AY8385661184MBSouth Africa: Durbangenomic RNAfrom heterosexual female patient 1184MBwho attended a prenatal clinicsubtype: C12316L,27I,41T,71D,83M,91V,96I,116A,120S,124V,148V,169F,178T,187D,203R,208G
AY8385881184MBSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,27I,41T,71D,83M,91V,96I,116A,120S,124V,148V,169F,178T,187D,203R,208G
AY8385891185MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316V,27I,41T,71D,75D,83L,92Q,116A,120S,148V,169F,178T,180D,187D,203R,208G
AY8385651189MBSouth Africa: Durbangenomic RNAfrom heterosexual female patient 1189MBwho attended a prenatal clinicsubtype: C12316L,14P,27I,41T,71D,79*,116A,120S,128D,148V,169F,178T,180D,187D,203R,208G
AY8385901201MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,27I,41T,71D,83I,116A,120S,124V,148V,169F,170R,178T,180D,187D,203R,207S,208G,225S
AY8385911204MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,27I,41T,71D,83L,96L,116A,124V,128D,148V,154K,169F,170R,178T,180D,187D,203R,208G,225S
AY8385931206MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316A,11A,15L,27I,41T,68I,71D,83L,91V,96L,116A,120G,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
AY8385941219MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,27I,41T,71D,83L,110N,116A,120G,124V,128D,148V,169F,171V,178T,180D,187D,203R,210S,225S
AY8569861220467Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,14P,15L,27I,83M,148V,225S
AY8385951231MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,15L,27I,41T,50S,71D,83L,111P,116A,120S,124V,128D,148V,169F,178T,180D,187D,203R,208G,225S
AY8385961232MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,10H,27I,41T,71D,83L,91V,116A,118I,120G,148V,154K,169F,178T,180D,187D,191I,203R,208G,210S,225S
AY856959142131Australiagenomic DNAderived by direct sequencing from bulk PCRamplification2123144A,83L,116A,120H,180D,198CG,208G
AY8569881426482Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316M,83LV,194AS,225S,230I
AY8569891520487Australiagenomic DNAderived by direct sequencing from bulk PCRamplification123114P,91V,180D
AY8569921810107Australiagenomic DNAderived by direct sequencing from bulk PCRamplification2223127I,83L,148V,180D
AY8569931820526Australiagenomic DNAderived by direct sequencing from bulk PCRamplification2023191V,120H,162KR,187EK,194S,208G
AY8569951910743Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,41A,83L,91IV,110N,116A,132K,136MR,225S,230I
AY8569971930552Australiagenomic DNAderived by direct sequencing from bulk PCRamplification1123114P,83L,120H,128D,216S
AY8385972013MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,27I,41T,59E,71D,116A,120S,124V,148V,154K,169F,178T,180D,203R,210S,225S
AY8385982014MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,14P,27I,41T,71D,83L,87Q,96I,110N,116T,120G,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
AY8385992015MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,15L,27I,41T,71D,91V,116A,120S,148V,154K,169F,171I,178T,180D,187D,203R,208G,225S
AY8386002017MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,14P,27I,41T,71D,83L,87R,91V,98D,110N,116A,120G,124V,128D,148V,154K,169F,178T,187D,188S,203R,208G,225S
AY8386012038MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,14P,15L,27I,31G,33N,41T,49S,71D,83L,87Q,116A,120G,128D,148V,154K,160T,169F,178T,180D,187D,203R,210S,225S,228X
AY8569982070133Australiagenomic DNAderived by direct sequencing from bulk PCRamplification2223127I,31G,33N,41A,54M,58I,79D,83T,92P,120S,128D,132K,148V,178T,199R,200S,207T,208G,225S
AY8386022098MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,27I,41M,45D,54S,71D,83L,91V,116A,118I,120G,123AP,148V,154K,169F,178T,180D,187D,191I,203R,208G,210ST
AY856962212460Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316M,14P,17A,41T,91IV,120CS,148V,180D,208G
AY8569992126302Australiagenomic DNAderived by direct sequencing from bulk PCRamplification2023131G,33N,54M,58I,92P,128D,148V,153IM,178T,200S,207T,208G
AY8570002140707Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,27I,41T,71D,80*W,83L,91A,96L,116A,124V,128D,148V,154K,169F,177S,178T,187D,193DN,203R,208EG,210S,225S
AY8570012210635Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316M,27I,83L,91IV,148IV,178IT,179PQ,225GS,230I
AY8570022210777Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,83L,91V,116N,120S,198*,199*,200A,208D,209S,210S,219HQ,222R,223R
AY8570032212790Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316M,83L
AY8386042213MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316M,27I,41T,71D,83L,116A,124V,128D,148V,154K,169F,171V,178T,183G,203R,210S
AY8386052245MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,13N,14P,27I,41T,71D,75D,83L,91P,116A,118I,120G,128D,148V,169F,178T,187D,203R,208G,225S
AY8386062256MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,15L,27I,41T,71D,75D,83L,91V,98D,116A,120S,124V,135IN,148V,169F,178T,180D,187D,203R,208G
AY8570072310435Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,17PR,27I,83L,86A,87Q,91F,92P,96I,116T,208G
AY8386072344MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,16T,27I,31G,33N,41T,54S,58I,71D,83L,110S,115V,120S,128D,148V,169F,178T,180D,187D,203R,208G,225S
AY8570082360047Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,10S,27I,80*W,83L,87P,91V,96LM,100K,110N,116A,120H,148V,178T,210S,225S
AY8386082373MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,207T,208G,225S
AY856964240718Australiagenomic DNAderived by direct sequencing from bulk PCRamplification123114P,23*W,91V,180D,225S
AY8570092434842Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,83L,91V,136M,208G
AY8386092446MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,15L,27I,41T,71D,83L,91V,116N,120S,148V,154K,169F,178T,187D,203R,208G
AY8570102460767Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316A,11T,14S,26A,27I,41T,54M,58I,71D,83T,92P,120S,135V,148V,167KR,169F,178ST,190LM,200S,203R,208G
AY8386102497MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,27I,41T,71D,75D,83L,116A,120S,128D,148V,169F,178T,187D,208G
AY8386112514MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,14S,15L,27I,41T,71D,75D,83L,116A,120S,128D,148V,169F,178T,180D,187D,207S,208G
AY8570112554222Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,15IL,19PT,83L,110NT,116A,180D,225S
AY8386122590MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,27I,41T,71D,83L,116A,120G,124V,128D,148V,169F,178T,180D,187D,203R,208G
AY8570132604752Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,14P,50S,54IL,83L,128D,180D,225GS
AY8570142624772Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,9R,10V,14P,15L,16T,27I,83T,120H,148V,178T,225S
AY8386132635MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: A2-C recombinant12316L,15L,27I,41T,50T,71D,83L,91A,116A,120G,124V,128D,148V,154K,169F,178T,187D,200G,203R,208G,225S
AY8386152637MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,15L,27I,41T,71D,83L,111P,116A,120S,128D,148V,169F,178T,187D,199R,200S,203R,208G,225S
AY8386162638MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,14P,15L,27I,41T,71D,83L,116A,120S,128D,148V,169F,178T,187D,203R,208G,210S,225S
AY8386172647MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,27I,41T,71D,87Q,91V,98D,116A,120S,124V,148V,169F,178T,180D,187D,203R,208G,210S
AY8386182651MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,27I,31G,33N,41T,71D,75D,83L,116A,128D,148V,154K,169F,178T,180D,203R,208S,210S,225S
AY8386192688MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,27I,41T,71D,83I,91N,92P,116A,120S,124V,148V,169F,178T,187D,203R,208G
AY8570152690267Australiagenomic DNAderived by direct sequencing from bulk PCRamplification52316L,14P,15M,17A,27I,41T,71D,72A,83L,91V,116A,120GS,124V,137EG,148V,154K,169F,178T,180D,187D,203R,207AS,208G,212EK,225S
AY8386202702MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,27I,41T,45D,71D,83I,91V,116A,120S,124V,148V,169F,178T,180D,187D,203R,208G
AY8386212711MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,15L,27I,41T,71D,116A,120G,124V,148V,169F,178T,180D,187D,203R,208G,225S
AY8386222720MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,14P,27I,31N,41T,59I,71D,83L,110N,116A,120G,124V,128D,148V,163E,169F,178T,180D,187D,203R,208G,225S
AY8386232732MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,27I,41T,71D,75D,83L,91V,116N,120G,124V,148V,163E,169F,178T,180D,187D,208G
AY8570162737253Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,27I,50T,71D,83L,91V,116A,128D,148V,154K,169F,178T,181I,187D,203R,208G,225S
AY8570182790526Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12314P,6L,91V,154K,178ST
AY8570192818711Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,41A,83L,87P,91V,98D,116A,120H,124V,132K,136M,148IT,180D
AY8570212830091Australiagenomic DNAderived by direct sequencing from bulk PCRamplification1523115M,17A,41A,83M,110N,120H,132K,136IM,154KR,161L
AY8570222870718Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,83L
AY856965294992Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316M,71DE,83L,118MT,120H,124IV,154K,170KR,171AITV,180D,208AG
AY8570263140658Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316IL,14S,15L,27I,83L,91IV,116A,120S,123AP,148V,178T,208G,214MV
AY856966335352Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,83L,120H,128D,136I
AY8570323698401Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,41T,83L,87Q,115V,120S,128D,148A
AY856967370658Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316P,50T,71D,83L,91V,116A,128D,148V,154K,169F,171IT,178T,181IV,187D,203R,208G,217AS,225S
AY8570333750847Australiagenomic DNAderived by direct sequencing from bulk PCRamplification2523141A,68I,83L,132K,136M,216A
AY856968380987Australiagenomic DNAderived by direct sequencing from bulk PCRamplification923117PR,91IV,154K,171V,194S,208AG
AY8570343810658Australiagenomic DNAderived by direct sequencing from bulk PCRamplification123114P,83L,91V,194S,230I
AY8570353860557Australiagenomic DNAderived by direct sequencing from bulk PCRamplification923114P,15L,23*W,31G,33N,54M,58I,60EG,92P,97K,120S,128D,148V,178T,183H,200S,207T,208G,223GR,225S,229KR
AY8570363860737Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,14P,15L,27I,41T,71D,83L,87Q,91V,96I,110N,112Y,116T,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
AY8570373920433Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316A,14S,15L,31G,33N,54M,58I,83AITV,92P,120S,128D,148V,178T,200S,207T,208G,225S
AY8570393940716Australiagenomic DNAderived by direct sequencing from bulk PCRamplification2123141A,83T,116A,120S,124T,148V,180D
AY8570403950018Australiagenomic DNAderived by direct sequencing from bulk PCRamplification823114P,15L,31G,33N,54M,58I,83I,92P,128D,148V,178T,200S,207T,208G,225S,229KR
AY8570413990287Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316M,27I,75D,83L,154K,177C,178T,225S
AY8570424050226Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,14P,15L,83M,120H,148V,180D,225S
AY8570434140976Australiagenomic DNAderived by direct sequencing from bulk PCRamplification1323117PR,41A,83L,120H,132K,136M,183S
AY8570444164371Australiagenomic DNAderived by direct sequencing from bulk PCRamplification123114P,41A,83L,91IV,116A,132K,136M,225GS
AY8570454216482Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,14P,27I,120H,128D,154K,178T,225S
AY8570464220173Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,15L,20*GLV,41T,80*W,83L,91V,100KR,107S,116A,118I,127GR,154K,184*,222GR
AY8570474234422Australiagenomic DNAderived by direct sequencing from bulk PCRamplification1523115L,16*S,31G,33N,54M,58I,92P,110N,128D,148V,200S,207T,208G,225S
AY8570484310177Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,23*W,83L,189LS
AY856969432010Australiagenomic DNAderived by direct sequencing from bulk PCRamplification2023131G,33N,54M,58I,61D,83L,87Q,92P,96L,110N,128D,146R,148I,154K,178T,200S,207T,208G,215L,225S
AY8570494340732Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,14P,79D,83L,91IT,120S,178ST
AY8570514640896Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,27I,36I,41T,71D,83L,87Q,91V,116T,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
AY8570524675282Australiagenomic DNAderived by direct sequencing from bulk PCRamplification32316M,15L,27I,41T,83L,96L,110N,116A,120H,160S,208G,225S
AY8570554800027Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,8GR,10IM,14P,17PR,54I,79D,83IT,91V,180D,225S
AY856970480355Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,225A
AY8570594922142Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12315T,6L,10IM,14AP,15L,23*W,80*W,83L,120H,178ST,184*W,208G,213DE,222GR,225S
AY8570604972002Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,15L,27I,41T,71D,83L,91N,92P,96V,116A,120G,154K,164CY,169F,178T,187D,203R,208G,225S
AY856971500437Australiagenomic DNAderived by direct sequencing from bulk PCRamplification1923141A,83L,91V,110N,116A,132K,136M
AY8570615020804Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,27I,41T,55X,56X,57X,58X,59X,60X,61X,62X,63X,64X,65X,66X,67X,68X,69X,70X,71V,83L,87Q,116A,120S,128D,148V,154K,169F,177S,178ST,187D,203R,208G,210S,225S
AY8570625024644Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,27I,41T,71D,83L,91IV,116A,120G,124V,128D,148V,169F,178T,180D,187D,203R,208G,225S
AY8570635074692Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,14P,15L,83L
AY8570655106552Australiagenomic DNAderived by direct sequencing from bulk PCRamplification32316A,11I,14S,15L,27I,41A,54M,58V,60EG,71D,83L,92P,111T,120S,128D,132K,135L,148V,154K,169F,180D,187D,200S,203R,208G,223EG
AY8570665200227Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,14P,15L,27I,83M,148V,225S
AY8570685274861Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316M,20LV,27I,75D,83L,86P,87Q,120S,154K,225S
AY8570695280095Australiagenomic DNAderived by direct sequencing from bulk PCRamplification2523141T,83L,115V,120S,178T
AY856972534954Australiagenomic DNAderived by direct sequencing from bulk PCRamplification2623127I,83L,91V,116A,120S,123A,148I
AY8570705360558Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,14P,15L,27I,41T,71D,83L,91V,116A,120S,128D,148V,169F,178T,180D,187D,203R,208G
AY8570715437713Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,27I,83L,86I,148V,180D
AY8570735550138Australiagenomic DNAderived by direct sequencing from bulk PCRamplification1023183L,178T
AY8570745562040Australiagenomic DNAderived by direct sequencing from bulk PCRamplification723191IV,154K,178T
AY8570755620861Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,15L,27I,33N,83L,91N,120S,148V,180D,208G,225S
AY8570765630136Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12315S,6L,18MR,83L
AY8570775660558Australiagenomic DNAderived by direct sequencing from bulk PCRamplification2023141X,44A
AY8570785690485Australiagenomic DNAderived by direct sequencing from bulk PCRamplification1923175DE,83L,120HNRS,183NS,230IV
AY8570805820646Australiagenomic DNAderived by direct sequencing from bulk PCRamplification1223183L,154K,171I,180D
AY8570825880197Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12315I,11A,59X,72P,83L,91N,92P,139K,142I,208G
AY8570835914671Australiagenomic DNAderived by direct sequencing from bulk PCRamplification62316LMV,14P,41T,83L,120H,128D,148A,180D
AY8570845920087Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316A,14S,15L,31G,33N,34S,54M,58I,83L,92P,107S,110N,120S,128D,200S,207T,208G,225S
AY8570866040974Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,17PR,27I,83L,87P,91V,120H,208G,213D
AY8570876052342Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,9A,12P,15L,27I,72P,73F,75G,76K,83L,87Q,91V,110N,116A,120H,148V
AY8570896180994Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,14AP,41A,54L,83M,91IV,116AG,120H,124IV,128DE,132K,136IM,154K,170KR,171AITV,180D,225S
AY8570906200565Australiagenomic DNAderived by direct sequencing from bulk PCRamplification923117PR,80*W,83L,206GR,229KR
AY856974630464Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,17PR,27I,41T,75D,83L,87Q,91V,120S,154K,194S
AY8570936357992Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316A,11GV,14P,15V,31G,33N,54M,58I,61D,83L,87Q,92P,96L,110N,128D,146R,148I,154K,178T,200S,207T,208G,215L,225S
AY8570946390757Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,15L,27I,41T,83L,91A,116A,120S,148V,180D,225S
AY8570976570158Australiagenomic DNAderived by direct sequencing from bulk PCRamplification2123127I,41T,48PT,50G,83L,87Q,91V,96I,116T,120S,128D,148V,154K,163DE,169F,178T,180D,187D,203R,208G,225S
AY8570986572760Australiagenomic DNAderived by direct sequencing from bulk PCRamplification2623154PT,83L,136M,143KR,144KR,216A,225S
AY8571006634522Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12314QR,6L,13N,14P,83L,91A,96L,107S,120S,136M,154K,225A
AY8571036760258Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12312L,6L,27I,83L,87Q,91V,148V,183H
AY8571046774973Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,68I,83L,120HN,128D,204AV,216A
AY8571056785343Australiagenomic DNAderived by direct sequencing from bulk PCRamplification2523183L,91V,180DE,194S,230I
AY8571076860793Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,14P,17PR,72A,83T,120H,148V,180D
AY8571086900694Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316M,15L,41A,75D,83L,116A,124IT
AY85695770057Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,75D,83L,180D
AY8571107130706Australiagenomic DNAderived by direct sequencing from bulk PCRamplification123154I,83L,87Q,91V,148V,154K,170R,210S,225S
AY8571127270458Australiagenomic DNAderived by direct sequencing from bulk PCRamplification1823127I,83L,86A,87Q,91V,96L,116A,120H,154K,178T
AY8571157314403Australiagenomic DNAderived by direct sequencing from bulk PCRamplification123127I,29K,39V,83T,98DE,120H,148V
AY8571187420338Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316A,11T,14S,15L,25EK,31G,33N,54M,58I,92P,110N,128D,135IT,148V,200S,207T,208G
AY8571197480094Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12314P,6L,7P,9P,14P,17PR,44AS,50X,54I,76G,77G,116A,131R,154K,171V,194S,225S
AY8571237645574Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,14P,41A,83M,86P,87Q,96I,98D,116T,132K,136M,153*,154K,161V,170R,178T,183NT,194S,202F
AY8571247688121Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,15L,41T,71DE,83L,87Q,91V,96I,98D,116A,120H,148S,154K,180D,208G,225S
AY8571257698731Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,41T,83L,87Q,115V,120S,128D,148A
AY8571277894552Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,15L,27I,83L,110N,120H,148V,225S
AY8571287974623Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,83L,194S,225S,230I
AY8571308020458Australiagenomic DNAderived by direct sequencing from bulk PCRamplification723114P,15L,31G,33N,54M,58I,83I,92P,128D,148AITV,149GS,160PS,200S,207T,208G,225S
AY8571328090387Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12315Y,6L,13P,15IL,27I,41T,83L,91HILN,148V,154KR,180D,199R,201IL,208G,225S
AY856979810837Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,14P,15V,24LV,27I,32FS,34AP,35DE,39W,40FV,41T,44X,45X,46X,47X,48X,49X,50X,51X,52X,53X,54X,55X,56X,57X,58X,59X,60X,61X,62X,63X,64X,65X,66X,67X,68X,69X,70X,71V,83L,86A,116A,120G,124V,128D,132K,148I,154K,169F,178T,180D,187D,203R,208G,210S,225S
AY8571338130991Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,15L,17PR,83L,120H,180D,208G
AY8571348145692Australiagenomic DNAderived by direct sequencing from bulk PCRamplification2023127I,30KR,83T,120H,148V,178T,225S
AY856980830534Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,15L,41A,83L,120H,132K,136M,148A,154K,225S
AY8571358315662Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,10X,11X,12X,13X,14X,15X,16X,17~,18~,19~,20~,21~,22X,23X,24X
AY8571368330785Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,14P,15L,27I,83I,148V,225GS,229KR
AY8571378420868Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316M
AY8571388440328Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316V,14P,16A,41T,83L,87Q,91P,96L,116A,120H,128D,180D,203R
AY8571408594192Australiagenomic DNAderived by direct sequencing from bulk PCRamplification123114P,44A
AY8571418600704Australiagenomic DNAderived by direct sequencing from bulk PCRamplification823183AMTV,91IV,116AG,194S,208G,213DE
AY8571438620835Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,8GR,10IM,14AP,41A,83L,116AG,132K,136M,149NS,170KR,194S
AY8571448634991Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,14P,79D,83L,154K,178T
AY8571458665145Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,27I,54M,58I,71D,83L,86A,87Q,91F,92P,120S,128D,148V,169F,178T,180D,203R,207S,208G
AY8571478726292Australiagenomic DNAderived by direct sequencing from bulk PCRamplification1823183L,154KR,171IT,180D
AY8571488754132Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316M,14P,41T,83L,180D,207Q,208G
AY8571518760552Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316M,14P,60EG,62HY,83M,148V,225S
AY8571528764142Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,27I,83FL,86AV,87Q,91V,120S,148V,180D
AY856982880192Australiagenomic DNAderived by direct sequencing from bulk PCRamplification1023117PR,83L,91P,96L,154K,178T,225S
AY8571538820638Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,15L,41T,83L,87Q,91V,136M,154K,180D,187D
AY8571548820868Australiagenomic DNAderived by direct sequencing from bulk PCRamplification1323114P,15L,17PR,31G,33N,54M,58I,92P,128D,148V,178T,200S,207AT,208G,225S
AY856983884351Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,14P,27I,68X,69X,70X,71V,79D,83L,148V,180D,225S
AY8571558864202Australiagenomic DNAderived by direct sequencing from bulk PCRamplification1923144A,83L,116A,123AP,148V,188ST,208AG,210KNT,216AT
AY8571588944972Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,14P,27I,41T,47AP,71D,87Q,91V,96I,116T,128D,148V,169F,178T,180D,187D,203R,208G,225S
AY8571609050046Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,83L,120H,180D,225S,230I
AY8571619050428Australiagenomic DNAderived by direct sequencing from bulk PCRamplification823115L,83L,120H,154K,160PS,208G,213D
AY8571629060341Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316M,27I,75D,83L,86A,87Q,120S,154K,225S
AY8571639060793Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,10A,15L,91V,153IT,154K
AY8571659125091Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,41A,83L,120H,132K,136M,183S,199KR
AY8571669172821Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316M,17PR,83L,120H
AY8571689200816Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316A,11T,14S,26A,27I,41T,54M,58I,71V,83L,225S
AY8571709290777Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,27I,41T,50T,71D,83L,87Q,91H,92P,93A,116A,120S,148V,154K,169F,178T,187D,203R,208G,210S
AY8571719300435Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,15L,83L,116A,148V,180D,230IV
AY8571749340158Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,27I,41T,71D,83L,87P,91V,96I,98D,116T,120NS,128D,148V,154K,169F,177S,178T,187D,203R,208G,210S
AY8571759420758Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316A,14S,15L,31G,33N,41T,54M,58I,83IV,86I,87Q,92P,96I,116T,128D,148V,149G,154K,178T,200S,203R,207AT,208G,225S
AY8571769430718Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,71DE,83L,86P,87Q,96I,116T,120S,126IV,199KR
AY8571809590727Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316M,15L,16T,83L,91T,120S,148I,154K,178T,225S
AY8571829762120Australiagenomic DNAderived by direct sequencing from bulk PCRamplification1123117PR,83L,188IT
AY8571839764853Australiagenomic DNAderived by direct sequencing from bulk PCRamplification2623183M,120H,148V,180D
AY8571849835043Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,15L,17PR,23*W,66LM,80*W,83L,91V,100KR,148V,156GR,180D,184*W
AY838624985MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,13N,14P,27I,41T,71D,83L,91P,116A,118I,120S,128D,148V,169F,178T,180D,187D,203R,208G,225S
AY8571859890487Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316L,15L,27I,68I,83L,131R,148V,180D,199R
AY8571869970445Australiagenomic DNAderived by direct sequencing from bulk PCRamplification12316A,11T,14S,15M,27I,54M,58I,71D,83L,86A,87Q,91F,92P,120S,128D,148V,169F,178T,180D,203R,207S,208G
AY838568J112MASouth Africa: Durbangenomic RNAfrom heterosexual female patient J112MAwho attended a prenatal clinicsubtype: C12316L,27I,41T,71D,83L,107S,116A,120S,124V,128D,148V,169F,171V,178T,200A,203R,225S
AY838626J129MSouth Africa: Durbangenomic RNAblood from heterosexual female motherof child who attended pediatric clinicsubtype: C12316L,27I,41T,71D,91P,96L,116A,120S,124V,128D,148V,154K,169F,171V,180D,187D,208G,210S,225S
AY838627PS-001MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C123114P,27I,41T,71D,83L,91N,96L,116A,124V,128D,148V,154K,169F,171V,178T,180D,187D,203R,210S
AY838628PS-005MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,15L,27I,31G,33N,41T,71D,83L,110S,116A,120S,124M,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
AY838629PS-006MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,27I,41T,71D,83L,116A,124V,128D,148V,169F,171C,178T,180D,187D,203R,208G,225S
AY838630PS-009MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,27I,41T,71D,83L,91V,116A,120G,123A,128D,148V,154K,169F,177S,178T,187D,203R,207S,208G,225A
AY838631PS-014MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,16T,27I,41T,71D,75D,83L,116A,120S,124V,148V,169F,178T,180D,187D,191I,207S,208G
AY838632PS-017MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,14P,27I,41T,71D,83L,116A,124V,128D,148V,154K,169F,178T,180D,200I,203R,204G,208G
AY838633PS-019MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,27I,41T,71D,83L,116A,124V,128D,148V,169F,178T,180D,187D,191I,203R,210S,225S
AY838634PS-020MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,15L,27I,41T,71D,83L,116A,124V,148V,154K,169F,178T,180D,187D,203R,208G,225S
AY838635PS-021MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316L,15L,27I,41T,83L,116A,120S,128D,148V,154K,169F,171I,178T,180D,203R,208G
AY838637PS-022MSouth Africa: Durbangenomic RNAblood from heterosexual female patientwho attended prenatal clinicsubtype: C12316M,27I,41T,71D,83L,91V,96V,98D,100T,116A,120S,124V,148V,154K,169F,178T,180D,203R,210S,225S