<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Pessoa (2016) Ultra-Deep Sequencing of HIV-1 near Full-Length and Partial Proviral Genomes Reveals High Genetic Diversity among Brazilian Blood Donors PLoS ONE 11 (3), E0152499 (2016) 1.9e-167 192 192 Naive PBMC NGS Molecular epidemiology

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AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
KT42786710BR_084RJ_1Brazil2010genomic DNAPBMCsubtype: B12316L,14S,15L,83L,154K,171V,177S,208H
KT42769010BR_MG006Brazil2010genomic DNAPBMCsubtype: BF1123127I,83L,86P,87Q,96I,98D,110N,116R,120S,148V,178T,194S
KT42768910BR_MG009Brazil2010genomic DNAPBMCsubtype: B12316L,96I,116T,180D
KT42768810BR_MG011Brazil2010genomic DNAPBMCsubtype: B12316L,75D,96L,116A,120H
KT42768710BR_MG012Brazil2010genomic DNAPBMCsubtype: B12316L,83L,178T
KT42768610BR_MG013Brazil2010genomic DNAPBMCsubtype: B12316L,41A,75D,83L,91V,116A,132K,136I,191I
KT42768510BR_MG014Brazil2010genomic DNAPBMCsubtype: B12316L,14P,41T,83L,87Q,91H,92P,96I,116A,180D,203R
KT42768410BR_MG016Brazil2010genomic DNAPBMCsubtype: B12316L,83L,180D,225S
KT42768310BR_MG018Brazil2010genomic DNAPBMCsubtype: B12316L,44A,87Q,96I,116A,123A,154K,208G,225S
KT42768210BR_MG020Brazil2010genomic DNAPBMCsubtype: B12316L,15L,36T,76K,83L,87Q,91V,96I,116A,136M,148I,154K,160S,208G
KT42783710BR_MG023_1Brazil2010genomic DNAPBMCsubtype: BF112316L,15L,41T,52I,71D,87Q,92P,96I,116Q,120S,124V,134V,148V,169F,178T,187D,200N,203R,208G
KT42768110BR_MG024Brazil2010genomic DNAPBMCsubtype: B12316L,27I,83L,86Q,87Q,120S,148V,178T,225S
KT42768010BR_MG028Brazil2010genomic DNAPBMCsubtype: B12316L,79D,83L,91V,116A,120S,128D,136M,154K,171V,183S,225S
KT42767910BR_MG030Brazil2010genomic DNAPBMCsubtype: BF112316L,14P,83L,91V,137R,180D,197N,212K,213K,222R
KT42784010BR_MG031_1Brazil2010genomic DNAPBMCsubtype: B12316L,14P,44A,79D,83L,110N,116A,120G,123A,136M,148V,154K,180D
KT42767810BR_MG032Brazil2010genomic DNAPBMCsubtype: C12316L,14P,17A,41T,71D,83L,91V,96L,113D,116A,124V,148V,154K,169F,178T,188S,194S,203R,208G,210S,225S
KT42767710BR_MG037Brazil2010genomic DNAPBMCsubtype: C12316L,14P,41T,71D,83L,91V,96L,116A,124V,128D,148S,169F,180D,187D,207Q,208G
KT42767610BR_MG038Brazil2010genomic DNAPBMCsubtype: B12316L,71D,83L,180D
KT42767510BR_MG039Brazil2010genomic DNAPBMCsubtype: B123114S,27I,83L,86Q,87Q,91N,96I,98D,116A,128D,148V
KT42767410BR_MG040Brazil2010genomic DNAPBMCsubtype: C12316A,11T,13H,14P,16T,41T,71D,83T,86A,91P,116A,124V,148V,154K,169F,178T,180D,187D,203R,208G
KT42767310BR_MG041Brazil2010genomic DNAPBMCsubtype: B12316L,83L,154K,178T
KT42767210BR_MG043Brazil2010genomic DNAPBMCsubtype: BF112316L,27I,148V,180D,226HR
KT42767110BR_MG044Brazil2010genomic DNAPBMCsubtype: B12316L,83L,136M,194S,208G
KT42767010BR_MG045Brazil2010genomic DNAPBMCsubtype: B12316L,10A,14T,15M,27I,83L,91V,116A,120H,128D,136I,148V,154K,178T,180D,216S
KT42766910BR_MG049Brazil2010genomic DNAPBMCsubtype: B12316L,41T,50G,59I,83L,87Q,91V,120S,148S,203R,208T,209P,216V
KT42784210BR_MG050_1Brazil2010genomic DNAPBMCsubtype: C12316L,14P,27I,41T,71D,79D,83L,91V,116A,120A,124V,148V,154K,169F,178T,188S,203R,208G
KT42784510BR_MG051Brazil2010genomic DNAPBMCsubtype: B12316L,27I,41T,83T,116A,128D,194S,208G
KT42766810BR_MG052Brazil2010genomic DNAPBMCsubtype: B12316L,83T,110N,116A,120G,123A,154K,171V,180D,210S,225S
KT42774710BR_PE003Brazil2010genomic DNAPBMCsubtype: B12316L,23*W,41T,80*W,83L,86A,87Q,91V,98D,106R,120S,154K,180D,194S
KT42774610BR_PE005Brazil2010genomic DNAPBMCsubtype: BF112316M,27I,45D,50S,54A,58I,71D,83M,87Q,96I,110N,116Q,120S,148V,169F,171A,178T,183G,187D,203R,208G,211I
KT42774510BR_PE006Brazil2010genomic DNAPBMCsubtype: B12316L,83M,86Q,87Q,91V,96L,120S,124V,128D,154K,179L,208G
KT42774410BR_PE012Brazil2010genomic DNAPBMCsubtype: B12316L,14P,15L,41T,91V,120S,135V,148V,154K,171V,180D,225S
KT42774310BR_PE013Brazil2010genomic DNAPBMCsubtype: B12312L,6H,27I,41T,68I,72A,83L,86Q,87Q,96I,116T,120G,148V,149G,154K
KT42774210BR_PE014Brazil2010genomic DNAPBMCsubtype: B12316L,14P,83L,86P,87Q,96I,98D,116T,136M,154K,178T,225S
KT42774110BR_PE015Brazil2010genomic DNAPBMCsubtype: B12316L,14P,27I,41T,71D,83L,87Q,91V,96I,110N,116T,148V,180D,191I
KT42786910BR_PE017Brazil2010genomic DNAPBMCsubtype: B12316L,14S,15L,83L,91V,96L,120S,124V,128D,136M,177C,179L
KT42774010BR_PE019Brazil2010genomic DNAPBMCsubtype: B12316L,14P,58A,83L,86P,87Q,91V,96I,98D,116T,180D,207T,208G
KT42773910BR_PE020Brazil2010genomic DNAPBMCsubtype: B12316F,27I,36I,71D,83L,87Q,91V,96L,100K,121T,128D,136I,154K,167Q,179V,225S
KT42773810BR_PE021Brazil2010genomic DNAPBMCsubtype: B12316L,14P,44A,83L,87P,91V,96I,98D,116T
KT42773710BR_PE022Brazil2010genomic DNAPBMCsubtype: B12316L,14P,15L,83L,87Q,91V,120H,128D,136M,137E,180D,208G
KT42773610BR_PE023Brazil2010genomic DNAPBMCsubtype: C12316L,14N,15L,27I,41T,71D,83L,86A,87Q,91V,96I,116A,124V,148V,154K,169F,178T,187D,208G,210S,225S
KT42773510BR_PE024Brazil2010genomic DNAPBMCsubtype: B12316L,27I,83L,87Q,91V,120S,123A,148V
KT42773410BR_PE028Brazil2010genomic DNAPBMCsubtype: B12316L,27I,41T,71D,83L,86A,87Q,91V,96I,116T,120S,148V,154K,180D,191I
KT42773310BR_PE030Brazil2010genomic DNAPBMCsubtype: B12316L,83L,96L,116A,120H
KT42773210BR_PE031Brazil2010genomic DNAPBMCsubtype: B12316L,83T,91V,120H,180D,225S,230I
KT42773110BR_PE033Brazil2010genomic DNAPBMCsubtype: B12316L,14P,79D,83L,86Q,87Q,96I,116T,120S,148V,154K,171V,183G
KT42773010BR_PE035Brazil2010genomic DNAPBMCsubtype: B12316L,14P,83L,86P,87Q,96I,110N,116A,148V,183G
KT42772910BR_PE036Brazil2010genomic DNAPBMCsubtype: B12316L,14P,83L,87Q,91V,96L,110N,116A,120S,124V,128D,177C,179L
KT42772810BR_PE037Brazil2010genomic DNAPBMCsubtype: B12316L,15L,83L,120H,148V,180D
KT42772710BR_PE038Brazil2010genomic DNAPBMCsubtype: B12316L,15L,27I,83L,116A,148V,178T
KT42772610BR_PE039Brazil2010genomic DNAPBMCsubtype: B12316L,27I,83L,98D
KT42772510BR_PE040Brazil2010genomic DNAPBMCsubtype: B12316L,27I,83L,148I
KT42772410BR_PE041Brazil2010genomic DNAPBMCsubtype: B123115L,27I,83L,86A,87Q,91V,96L,116A,120H,124V,148V,180D,225S
KT42772310BR_PE042Brazil2010genomic DNAPBMCsubtype: B12316L,83L,86A,87Q,91V,112A,120S,124V,154K,170R,180D,194S,210S
KT42772210BR_PE043Brazil2010genomic DNAPBMCsubtype: B12316L,53DN,83L,87Q,91V,96L,110N,116A,120S,124V,128D,136M,177C,179L,187D,208G
KT42772110BR_PE044Brazil2010genomic DNAPBMCsubtype: B12316L,15M,27I,71D,83M,87Q,91V,96L,116A,120H,154K,156GR,167QR,180D,184*W,206GR
KT42772010BR_PE045Brazil2010genomic DNAPBMCsubtype: B12314R,6L,27I,71D,83M,116D,120R,148V,154K,180D
KT42771910BR_PE047Brazil2010genomic DNAPBMCsubtype: B12316IL,83LV,86ALPV,87HQ,96IM,98DE,116AGRT
KT42771810BR_PE048Brazil2010genomic DNAPBMCsubtype: B12316L,27I,83L,87P,91V,98D,107S,120S,148V,183T
KT42771710BR_PE049Brazil2010genomic DNAPBMCsubtype: B12316L,14P,15L,41T,83L,96L,110N,116A,120H,128D,154K,180D,225S
KT42771610BR_PE051Brazil2010genomic DNAPBMCsubtype: B12316L,14P,72A,83L,86P,87Q,96I,116T,148S,154K,160S
KT42771510BR_PE052Brazil2010genomic DNAPBMCsubtype: B12316L,14P,41T,75D,83M,91A,120S,135V,154K,171I,180D,225S
KT42771410BR_PE054Brazil2010genomic DNAPBMCsubtype: B12316L,14P,83L,178T,225S
KT42784810BR_PE057_1Brazil2010genomic DNAPBMCsubtype: B12316L,15L,27I,83L,136M,148V,149G,154K,194S,225S
KT42771310BR_PE058Brazil2010genomic DNAPBMCsubtype: B12316M,83L,154K,194S,220EG,222GR,223GR,229KR
KT42787010BR_PE061Brazil2010genomic DNAPBMCsubtype: B12316L,27I,41A,45D,54S,83L,92V,93Q,96I,116T,120S,148V,154K,194S
KT42785010BR_PE062_1Brazil2010genomic DNAPBMCsubtype: B12316L,14P,83L,87Q,91V,96L,120S,128D,154K,179L,208G
KT42787110BR_PE063Brazil2010genomic DNAPBMCsubtype: BF112316L,27I,44A,71D,83L,87Q,92P,96I,116Q,120S,148V,154K,169F,171V,178T,187D,225S
KT42764610BR_PE065_1Brazil2010genomic DNAPBMCsubtype: B123114P,41A,83L,116A,132K,136I,154K,170R
KT42771210BR_PE067Brazil2010genomic DNAPBMCsubtype: B12316L,14P,83L,91V,120S,123S,154K,171V,180D
KT42771110BR_PE068Brazil2010genomic DNAPBMCsubtype: B12314R,6L,14P,16T,31N,41T,71D,83M,87Q,96I,116A,120G,128D,135V,136M,154K,180D
KT42771010BR_PE069Brazil2010genomic DNAPBMCsubtype: BF112316L,50G,59I,71D,83L,87Q,91V,120S,128D,180D
KT42785210BR_PE070_1Brazil2010genomic DNAPBMCsubtype: B12316L,37V,83L,87Q,120S,139H,225S
KT42770910BR_PE072Brazil2010genomic DNAPBMCsubtype: B12316L,14T,50S,83L,91A,120S,128D,159K,178T,222E
KT42770810BR_PE074Brazil2010genomic DNAPBMCsubtype: B12316L,15M,16T,27I,50S,83M,86A,87Q,91L,96L,116T,154K,178T,210S
KT42770710BR_PE076Brazil2010genomic DNAPBMCsubtype: B12316L,15L,41T,91AV,116EGQR,120S,154K,180D,191I,199R,205M,208G
KT42770610BR_PE077Brazil2010genomic DNAPBMCsubtype: B12316L,14P,15L,16T,79D,83L,91V,120S,148V,154K,171V,180D
KT42770510BR_PE078Brazil2010genomic DNAPBMCsubtype: BF112316L,75D,83L,180D,230I
KT42770410BR_PE079Brazil2010genomic DNAPBMCsubtype: B12316L,15L,27I,30R,83L,96I,110N,116A,148I,180D
KT42787210BR_PE081Brazil2010genomic DNAPBMCsubtype: B12316L,41T,83T,91T,110N,120S,135V,136M,154K,171V,180D
KT42770310BR_PE082Brazil2010genomic DNAPBMCsubtype: B12316L,41T,91V,120S,135V,136M,154K,171V,180D,225S
KT42770210BR_PE083Brazil2010genomic DNAPBMCsubtype: B12316L,14P,15L,83L,116A,123G,124V
KT42787310BR_PE089Brazil2010genomic DNAPBMCsubtype: B12316L,41T,83L,154K,194S,230I
KT42770110BR_PE093Brazil2010genomic DNAPBMCsubtype: B12316L,83M,87Q,91V,96L,120S,124V,128D,154K,179L,208G
KT42770010BR_PE095Brazil2010genomic DNAPBMCsubtype: B12316L,14P,83I,87Q,96I,116T,178T,210S,225S
KT42769910BR_PE096Brazil2010genomic DNAPBMCsubtype: B12316L,15L,27I,33N,83L,116N,120S,148V,180D,194S,208G,225S,230I
KT42769810BR_PE099Brazil2010genomic DNAPBMCsubtype: BF112316L,14P,44A,83L,96I,97K,110N,116A,180D,225S,230I
KT42769710BR_PE101Brazil2010genomic DNAPBMCsubtype: B12316H,11I,41T,50H,71D,83T,87Q,91V,98D,116A,120S,154K,180D,199R,216S
KT42769610BR_PE103Brazil2010genomic DNAPBMCsubtype: B12316L,14P,83L,86A,87Q,91V,96I,98D,110N,116A,120A,128D,154K,179L,194S,208G
KT42769510BR_PE105Brazil2010genomic DNAPBMCsubtype: B123114P,15L,83M,87Q,91V,120S,148V,180D,225S
KT42769410BR_PE106Brazil2010genomic DNAPBMCsubtype: B12316L,14P,16A,41T,83L,91A,120S,135V,154K,225S
KT42769310BR_PE108Brazil2010genomic DNAPBMCsubtype: B12316L,83L,86I,91V,116A,120S,124V,128D,136M,177C,179L,187D,208G
KT42769210BR_PE110Brazil2010genomic DNAPBMCsubtype: B12316L,14P,83L,91V,110N,116A,120G,124V,128D,136M,177C,179L,187D,208G
KT42785410BR_PE111_1Brazil2010genomic DNAPBMCsubtype: B12316L,83L,87Q,91V,96L,154K
KT42769110BR_PE112Brazil2010genomic DNAPBMCsubtype: B12316L,14P,83L,87Q,91V,96I,116A,180D,225S,230I
KT42779310BR_RJ001Brazil2010genomic DNAPBMCsubtype: BCF112316V,27I,71D,87Q,92P,96I,116Q,148V,169F,178T,183G,187D,207T,208G,225S
KT42785910BR_RJ004_1Brazil2010genomic DNAPBMCsubtype: B12316L,27I,83M,87Q,91V,120S,148V,178T
KT42779210BR_RJ005Brazil2010genomic DNAPBMCsubtype: B123127I,83L,86P,87Q,91V,120G,124V,148V,178T
KT42779110BR_RJ008Brazil2010genomic DNAPBMCsubtype: B12316L,83L,194S
KT42779010BR_RJ009Brazil2010genomic DNAPBMCsubtype: BC12316L,15V,27I,41T,71D,83L,91V,96L,116A,124V,128D,132K,136I,148V,154K,169F,178T,180D,187D,203R,208G
KT42764910BR_RJ012Brazil2010genomic DNAPBMCsubtype: BF112316L,27I,87Q,110N,120S,154K,171V,194S,225S
KT42778910BR_RJ014Brazil2010genomic DNAPBMCsubtype: BF112316L,15L,27I,71D,83I,92P,116Q,120S,124V,148V,169F,178T,187D,208G
KT42778810BR_RJ016Brazil2010genomic DNAPBMCsubtype: B12316L,27I,41A,83L,91V,132K,136M,154K,178T,225S
KT42778710BR_RJ017Brazil2010genomic DNAPBMCsubtype: B12316L,12Y,15L,41T,50A,83L,87Q,111P,120S,148V,170R,178T,194S
KT42786210BR_RJ018_1Brazil2010genomic DNAPBMCsubtype: B12316M,27I,36I,41A,83L,86P,87Q,91V,116N,120S,126I,132K,136I,148V
KT42778610BR_RJ019Brazil2010genomic DNAPBMCsubtype: B12316L,83L,154K,180D
KT42778510BR_RJ020Brazil2010genomic DNAPBMCsubtype: B123114P,27I,29D,36I,71D,83L,87Q,91V,96L,120H,128D,132K,148V,180D,210S,225A
KT42778410BR_RJ024Brazil2010genomic DNAPBMCsubtype: B12316L,27I,83L,91A,120S,148V,183G,225S,230I
KT42778310BR_RJ025Brazil2010genomic DNAPBMCsubtype: B12316L,83L,160S
KT42778210BR_RJ029Brazil2010genomic DNAPBMCsubtype: BF112316T,11I,12Y,14S,15L,27IV,41T,71D,83L,87Q,92P,96I,110N,116Q,117*W,120NS,124V,148AV,154K,169F,178T,183G,187D,191I,203R,208G,225S
KT42778110BR_RJ030Brazil2010genomic DNAPBMCsubtype: B12316L,14P,15L,27I,41T,71D,83M,87Q,91H,92P,93A,96L,110N,116A,120H,128D,148V,154K,169F,178T,187D,208G
KT42778010BR_RJ031Brazil2010genomic DNAPBMCsubtype: BF112316L,83L,216S
KT42777910BR_RJ036Brazil2010genomic DNAPBMCsubtype: BF112316Q,11T,12Y,14S,15L,27I,71D,83L,92P,116Q,120S,124V,148V,169F,178T,187D,191I,207V,208G,225S
KT42777810BR_RJ039Brazil2010genomic DNAPBMCsubtype: BC12316A,14S,27I,41T,71D,83L,91A,116A,120S,128D,148V,154K,169F,178T,187D,203R,204G,207Q,208G,210S
KT42765010BR_RJ040Brazil2010genomic DNAPBMCsubtype: BF112316L,14P,15L,27I,41T,83I,91V,120G,148V,180D,208G,210S
KT42777710BR_RJ042Brazil2010genomic DNAPBMCsubtype: B12316L,83L,180D
KT42777610BR_RJ044Brazil2010genomic DNAPBMCsubtype: BF112313I,6Q,12Y,14S,15L,44A,71D,83L,110N,116Q,120S,148V,169F,178T,183G,187D,208G,210S,225S
KT42777510BR_RJ052Brazil2010genomic DNAPBMCsubtype: B12316L,41A,78AG,83L,96I,116T,120S,125Q,154K,225S
KT42777410BR_RJ055Brazil2010genomic DNAPBMCsubtype: BF112316L,15L,27I,71D,83T,92P,110S,116Q,120S,124V,148V,169F,178T,187D,208G,225S
KT42786510BR_RJ056Brazil2010genomic DNAPBMCsubtype: B12316L,27I,36I,41A,83M,110S,132K,136I,148V,178T
KT42777310BR_RJ063Brazil2010genomic DNAPBMCsubtype: CDK12316L,15L,27I,83L,91V,116A,120S,123A,148V,180D,208Q,225S
KT42777210BR_RJ064Brazil2010genomic DNAPBMCsubtype: B12316L,14S,15L,83L,116A,136M,208G
KT42777110BR_RJ067Brazil2010genomic DNAPBMCsubtype: B12316L,27I,75D,83L,91V,116A,120S,148V,180D
KT42777010BR_RJ068Brazil2010genomic DNAPBMCsubtype: B12316L,14P,15L,27I,29D,41T,83M,87Q,88Q,110N,120S,148V,179A
KT42765110BR_RJ075Brazil2010genomic DNAPBMCsubtype: B12316L,27I,41T,71D,75D,92P,116Q,120S,124V,148V,154K,169F,178T,183G,187D,200I,204G,208G,225S
KT42776910BR_RJ078Brazil2010genomic DNAPBMCsubtype: B12312L,5S,6P,11T,12Y,14S,41T,64G,83L,87Q,91V,96V,116T,120S,148V,154K,178T,179P,200S,211I
KT42776810BR_RJ079Brazil2010genomic DNAPBMCsubtype: B12316L,83L
KT42776710BR_RJ081Brazil2010genomic DNAPBMCsubtype: B12316L,41T,71D,83L,91V,154K,170R,180D,187D,203R,208G
KT42776610BR_RJ083Brazil2010genomic DNAPBMCsubtype: B12316M,10I,41T,83L,86P,87Q,91V,96I,98D,116T,136M,154K,194S,208G,216S,225S
KT42776510BR_RJ085Brazil2010genomic DNAPBMCsubtype: B12316L,14P,27I,83L,148V,149G,178T
KT42776410BR_RJ086Brazil2010genomic DNAPBMCsubtype: B12316A,11T,12Y,14S,44A,75D,83L,86T,87Q,91V,120S,178T,200H,225S
KT42776310BR_RJ088Brazil2010genomic DNAPBMCsubtype: B123115L,50S,83L,87Q,91V,120S,154K,167RW,225S
KT42776210BR_RJ089Brazil2010genomic DNAPBMCsubtype: B12316L,27I,83L,91V,148V
KT42776110BR_RJ090Brazil2010genomic DNAPBMCsubtype: B12316L,14P,15L,27I,41T,83L,86P,87Q,98G,120S,148I,154K,225S
KT42776010BR_RJ091Brazil2010genomic DNAPBMCsubtype: BC12316L,15L,27I,83L,91V,120H,148V,154K,180D,225S
KT42775910BR_RJ093Brazil2010genomic DNAPBMCsubtype: BF112316L,14P,15L,27I,36I,71D,79D,83L,92P,116Q,120S,124V,148V,154K,169F,178T,187D,203R,208G,225S
KT42775810BR_RJ094Brazil2010genomic DNAPBMCsubtype: BF1123114P,15L,44A,71D,83L,92P,110S,116A,120A,124V,148V,154K,169F,178T,187D,208G
KT42775710BR_RJ097Brazil2010genomic DNAPBMCsubtype: B12316L,27I,83L,86P,87Q,91V,148V,178T,225S,229K,230I
KT42775610BR_RJ098Brazil2010genomic DNAPBMCsubtype: B123183L,120H,128D,136I,154K,178T,225S
KT42775510BR_RJ099Brazil2010genomic DNAPBMCsubtype: B12316L,14P,27I,83L,87Q,91V,96I,110N,116A,148I,154K,178T,225S
KT42775410BR_RJ100Brazil2010genomic DNAPBMCsubtype: B12316L,14S,15L,31G,33N,83L,91V,148V,178T,207T,208G
KT42775310BR_RJ101Brazil2010genomic DNAPBMCsubtype: B12316L,27I,36I,83L,120H,128D,148V,154K,171V,180D,225S
KT42775210BR_RJ103Brazil2010genomic DNAPBMCsubtype: C12316L,11T,14P,27I,41T,71D,91V,116A,120G,124V,148V,154K,169F,170R,178T,180D,187D,203R,208G
KT42765210BR_RJ104Brazil2010genomic DNAPBMCsubtype: BF112316L,31G,33N,41A,71D,83L,92P,112A,116Q,120S,124V,132K,148V,154K,169F,178T,183G,191T,208G
KT42765310BR_RJ105_1Brazil2010genomic DNAPBMCsubtype: B12316L,83L
KT42775110BR_RJ106Brazil2010genomic DNAPBMCsubtype: B12316L,50G,59I,83L,87Q,116A,120S,128D,154K,160S,178T
KT42775010BR_RJ107Brazil2010genomic DNAPBMCsubtype: B12316L,83L,87Q,91V,120S,136M,154K,180D,205M,208G,225S
KT42774910BR_RJ110Brazil2010genomic DNAPBMCsubtype: B12316L,14AS,27I,36I,83L,120H,128D,148V,154K,171V,180D,225S
KT42774810BR_RJ111Brazil2010genomic DNAPBMCsubtype: B12316L,83L,91V,154K,170R,194S
KT42783110BR_SP001Brazil2010genomic DNAPBMCsubtype: B12316L,27I,83L,91V,116A,120S,123A,148V,178T,194S,208G,225S
KT42783010BR_SP002Brazil2010genomic DNAPBMCsubtype: B12316L,83L
KT42782910BR_SP004Brazil2010genomic DNAPBMCsubtype: B123114P,16T,27I,83L,86P,87Q,96I,116T,148V,180D,194S
KT42782810BR_SP005Brazil2010genomic DNAPBMCsubtype: BF112316A,11I,14S,50S,54I,71D,79D,83L,92P,116Q,120S,124V,128D,148V,154K,169F,177C,178T,183G,187D,208G,210S,225A
KT42782710BR_SP006Brazil2010genomic DNAPBMCsubtype: B12316L,15M,16T,41A,54L,83T,91V,110N,116A,132K,136I,154K,194S
KT42782610BR_SP007Brazil2010genomic DNAPBMCsubtype: B12316M,14P,27I,41T,78S,83L,120H,124V,154K,178T
KT42782510BR_SP010Brazil2010genomic DNAPBMCsubtype: BF112316L,44A,71D,83L,92P,116Q,120S,124V,148V,154K,169F,180D,183G,187D,205M,208G
KT42782410BR_SP012Brazil2010genomic DNAPBMCsubtype: B12316L,14P,15L,83L,120H,148V,180D
KT42782310BR_SP013Brazil2010genomic DNAPBMCsubtype: BF1123141T,83L,87Q,91V,96I,116A,124V,154K,180DE,225S
KT42782210BR_SP015Brazil2010genomic DNAPBMCsubtype: BC12316L,15L,83L,120HN,148V,180D
KT42782110BR_SP016Brazil2010genomic DNAPBMCsubtype: B12316L,41T,71D,83L,154K,180DE,199KR,208G,225A
KT42782010BR_SP018Brazil2010genomic DNAPBMCsubtype: BF112316L,15L,27I,41T,50S,54S,71D,83I,92P,116Q,120S,124V,148V,169F,178T
KT42781910BR_SP019Brazil2010genomic DNAPBMCsubtype: B12316L,7QR,15L,27I,83L,87Q,110N,116A,120S,136M,148I,178T,210ST,225S
KT42765710BR_SP020_1Brazil2010genomic DNAPBMCsubtype: B12316L,33N,68I,83L,87Q,91V,96I,120H,132K,136M,180D
KT42781810BR_SP023Brazil2010genomic DNAPBMCsubtype: CF112316L,14P,17A,41T,71D,83L,91V,116A,120S,124V,135V,146R,148A,149N,154K,169F,177G,180D,199R,208G,210S,230I
KT42765910BR_SP024_1Brazil2010genomic DNAPBMCsubtype: B12316L,27I,83L,120H,148V,180D
KT42781710BR_SP025Brazil2010genomic DNAPBMCsubtype: C12316L,41T,67E,68I,71D,83L,116A,124V,128D,148V,154K,169F,178T,187D,203R,204G,207A,208G,210S
KT42781610BR_SP026Brazil2010genomic DNAPBMCsubtype: CRF71_BF1123150T,71D,83L,87Q,92P,96I,110N,116Q,120S,124V,148V,169F,180D,183G,187D,203R,208G,210S,230I
KT42781510BR_SP027Brazil2010genomic DNAPBMCsubtype: B12316L,41A,83L,91V,110N,116A,132K,136M,229KR
KT42781410BR_SP029Brazil2010genomic DNAPBMCsubtype: F112316L,14P,44A,71D,83L,92P,116Q,120S,124V,148V,169F,178T,183G,187D,208G,225S
KT42781310BR_SP030Brazil2010genomic DNAPBMCsubtype: B12316L,14S,15L,27I,41T,83L,86T,87Q,91V,96I,116A,120S,124V,154K,208G
KT42781210BR_SP031Brazil2010genomic DNAPBMCsubtype: BC12316A,27I,41T,71D,83M,87Q,91V,98D,116A,120G,124V,148V,154K,169F,178T,183H,203R,208G
KT42781110BR_SP032Brazil2010genomic DNAPBMCsubtype: B12316L,14S,15L,27I,41T,83L,86T,87Q,91V,96I,116A,120S,124V,154K,208G
KT42781010BR_SP033Brazil2010genomic DNAPBMCsubtype: C12316H,14P,27I,41T,71D,116T,120S,148V,154K,169F,178T,180D,187D,203R,208G,210S
KT42780910BR_SP035Brazil2010genomic DNAPBMCsubtype: BF112316L,36I,41T,83L,87Q,91V,96I,116A,123A,148V,154K,180D
KT42780810BR_SP036Brazil2010genomic DNAPBMCsubtype: B12316L,15L,33N,83L,86P,87Q,91V,96I,110S,116T,120S,124V,148V,180D
KT42780710BR_SP037Brazil2010genomic DNAPBMCsubtype: BF112316L,14S,27I,71D,83L,86A,87Q,92P,96I,98D,116Q,120S,124V,148V,169F,178T,187D
KT42766110BR_SP039_1Brazil2010genomic DNAPBMCsubtype: B12316L,15L,27I,50S,83L,120H,128D,148V,154K,178T
KT42780610BR_SP041Brazil2010genomic DNAPBMCsubtype: C12316L,14P,17A,27I,41T,71D,83L,91V,107S,116A,120S,124V,128D,148V,154K,169F,178T,187D,208G,210S
KT42780510BR_SP044Brazil2010genomic DNAPBMCsubtype: B12316L,23S,41T,80S,82K,87Q,89R,100K,106R,116R,117S,120S,127R,133S,156R,162K,180D,184S
KT42780410BR_SP047Brazil2010genomic DNAPBMCsubtype: B12316L,41A,72V,83I,116A,132K,136M,148S,154K,194AS
KT42780310BR_SP051Brazil2010genomic DNAPBMCsubtype: B12316L,27I,83L,110N,116A,148V,180D
KT42780210BR_SP052Brazil2010genomic DNAPBMCsubtype: B12316L,14P,16A,27I,83L,91V,116A,128D,187D,208G,225S
KT42780110BR_SP054Brazil2010genomic DNAPBMCsubtype: BF112316L,27I,83L,148V,178T
KT42780010BR_SP060Brazil2010genomic DNAPBMCsubtype: C12316L,14P,15M,17A,41T,71D,83L,91V,96L,110N,116A,124V,148V,154K,169F,178T,188S,194S,203R,208G,210S
KT42779910BR_SP062Brazil2010genomic DNAPBMCsubtype: B12316L,44A,83L,148V,180D
KT42779810BR_SP063Brazil2010genomic DNAPBMCsubtype: BF112316V,27I,71D,92P,116Q,120S,124V,148V,169F,178T,187D,208G,210N,225S
KT42779710BR_SP065Brazil2010genomic DNAPBMCsubtype: B12316L,14P,79D,83L,86P,87Q,96I,107S,116T,120S,154K,171I,183T,225S
KT42779610BR_SP067Brazil2010genomic DNAPBMCsubtype: B12312V,6L,12Y,14G,15L,27I,30R,41T,46R,59I,68I,83L,87Q,91V,96I,98D,115V,116Q,120G,123S,128D,154K,178T,225S
KT42779510BR_SP068Brazil2010genomic DNAPBMCsubtype: BF1123115L,27I,71D,92P,116Q,120S,124V,148V,169F,178T,187D,208G,210S
KT42766310BR_SP070_1Brazil2010genomic DNAPBMCsubtype: F112316L,14S,15L,27I,41A,45D,71D,91V,92P,116Q,120S,124V,132K,148A,154K,169F,178T,187D,191I,208G,210S,225S
KT42766610BR_SP073_1Brazil2010genomic DNAPBMCsubtype: B12316L,14P,27I,83L,148V,180D
KT42779410BR_SP074Brazil2010genomic DNAPBMCsubtype: B12316L,14S,15L,83L,96I,116A,225S,229K,230I

Database

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Team