<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Iweriebor (2012) Molecular epidemiology of HIV in two highly endemic areas of northeastern South Africa Arch. Virol. 157 (3), 455-465 (2012) 3.9e-152 42 42 Naive Plasma Direct PCR Molecular epidemiology

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AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
GU20171107B10ZASouth Africa2007genomic DNAdrug naive patient12166L,10L,15L,27I,31G,33N,41T,71D,83L,91A,96L,107S,116A,124V,128D,148V,154K,169F,177C,178T,180D,187D,200N,202K,203S,204I,205E,206D,207A,208G
GU20175207B11ZASouth Africa2007genomic DNAdrug naive patient12166A,11I,23G,35R,41T,71D,83L,91V,99A,116A,121T,143G,148V,154K,169F,177C,180D,187D,201F,203R,208G,209P
GU20172007B13ZASouth Africa2007genomic DNAdrug naive patient12136L,27I,31S,33F,35Q,41P,71D,91V,110N,115V,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S
GU20171307B14ZASouth Africa2007genomic DNAdrug naive patient12166L,27I,29G,30E,41T,71D,83T,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S
GU20171407B158ZASouth Africa2007genomic DNAdrug naive patient12166L,27I,41T,71D,83L,87Q,91V,116A,120S,128D,148V,154K,163E,169F,177S,178T,187D,202K,203S,204I,205A,208G,210S
GU20170907B159ZASouth Africa2007genomic DNAdrug naive patient12166A,13T,14P,15L,16T,24E,26L,27I,31N,32S,35K,41T,71D,78X,79X,80M,83I,84L,89X,91V,93X,98X,101E,116A,119X,120S,124F,128D,134X,138X,141X,142S,143K,145V,148V,149R,154K,169F,177C,178T,180D,187D,200N,202K,203S,204I,205E,206D,207A,208G
GU20174907B15ZASouth Africa2007genomic DNAdrug naive patient12163G,6A,13T,14P,15L,16T,27I,31N,41T,71D,75D,83L,116A,120G,148V,154K,160S,169F,177T,178T,180D,187D,203R,206V,207A,208G,210S
GU20175007B18ZASouth Africa2007genomic DNAdrug naive patient12166H,14S,15L,27I,30L,31T,32R,33N,41T,71D,83L,91V,115V,116N,120S,128D,148V,154K,169F,178T,187D,203R,208G,210N
GU20171207B2ZASouth Africa2007genomic DNAdrug naive patient12166L,15I_S,27I,30~,36I,53K,58V,71D,79X,80X,83L,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,205L_P,208G,210S
GU20171507B36ZASouth Africa2007genomic DNAdrug naive patient12166L,14P,15L,27I,31G,33N,41T,71D,83L,91V,115V,116N,120S,128D,148V,154K,156E,169F,178T,187D,203R,205L_P,208G,210S
GU20174807B5ZASouth Africa2007genomic DNAdrug naive patient12166A,11I,30P,36I,41A,56M,57T,59G,71D,83L,91V,107V,116A,120S,124V,128D,148V,154K,169F,178T,187D,200I,204G,208G
GU20175107B6ZASouth Africa2007genomic DNAdrug naive patient12166L,14P,15L,27I,29D,30E,31G,32V,33Q,41T,71D,83L,91V,107S,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
GU20175307B8ZASouth Africa2007genomic DNAdrug naive patient12166L,14S,15L,27I,28A,30S,41T,71D,96I,116A,120S,124V,148V,169F,178T,180D,203R,206D,208G,213D
GU20172107B9ZASouth Africa2007genomic DNAdrug naive patient12126L,27I,33N,41T,49L,71D,83L,91A,96L,107S,116A,124V,128D,148V,154K,169F,177C,178T,180D,187D,200N,203R,208G
GU20173507M10ZASouth Africa2007genomic DNAdrug naive patient12156H,27I,28A,30M,31G,33H,35R,41T,67P,71D,83L,91V,115V,116~,120S,128D,147H,148V,152K,154K,169F,178T,180D,187D,200S,203R,208G,210N,215T
GU20172407M11ZASouth Africa2007genomic DNAdrug naive patient12146P,14S,27I,41T,71D,83L,91A,96L,107S,116A,124V,128D,148V,154K,169F,177C,178T,180D,187D,203R,208G
GU20172807M12ZASouth Africa2007genomic DNAdrug naive patient12046H,14P,16A,27I,41T,71D,91V,116A,120G,135V,148V,154K,169F,178T,187D,204Q
GU20174407M13ZASouth Africa2007genomic DNAdrug naive patient121527I,31G,33N,41T,71D,91V,116A,148V,154K,169F,178T,187D,202N,203S,204I,205S,206V,207A,208R
GU20174007M15ZASouth Africa2007genomic DNAdrug naive patient12146L,14P,15L,27I,28G,29S,30R,31G,33Q,41T,57I,71D,83L,110N,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208R,208R_R,210S
GU20174107M16ZASouth Africa2007genomic DNAdrug naive patient12156L,14P,27I,36I,41T,71D,83L,84N,87R,91V,98D,110N,116A,120S,124V,148V,154K,169F,178T,180D,187D,203R,208V,211I
GU20172907M17ZASouth Africa2007genomic DNAdrug naive patient12136L,14P,27I,30R,30R_D,41T,71D,96I,116A,120S,124V,148V,169F,178T,180D,203R,206D,208G,213D
GU20173107M18ZASouth Africa2007genomic DNAdrug naive patient12156L,18K,19N,20F,21E,22M,23Q,27I,28R,29S,30S,31K,32A,33F,41T,71D,83L,91V,99T,116Q,120S,128D,148V,154K,169F,178T,180D,203R,208G
GU20172607M19ZASouth Africa2007genomic DNAdrug naive patient12146L,14P,27I,29Q,35R,41T,83L,86A,87Q,91V,110N,116N,120G,131R,148V,154K,178T,180D,200I,204D,205K,206T,207T,208V,209L,210R,211S
GU20172507M22ZASouth Africa2007genomic DNAdrug naive patient12126L,14P,15L,27I,41T,43F,71D,91V,110N,116A,120S,128D,148V,169F,178T,180D,187D,202K,202K_H,203R,208G,212R
GU20173807M25ZASouth Africa2007genomic DNAdrug naive patient12156L,27L,41T,71D,83L,107S,110N,116A,120G,128D,148V,154K,169F,187D,203R,208G
GU20172207M27ZASouth Africa2007genomic DNAdrug naive patient12126L,14P,15L,27I,41T,71D,91V,110N,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,207T,208P,209R,210A,212G
GU20171807M2ZASouth Africa2007genomic DNAdrug naive patient12126L,14P,15L,27I,31G,33N,41T,71D,83L,91V,115V,116N,120S,128D,148V,154K,169F,178T,186A,187D,202F,204S,204S_R,205M,206R,207E,208G
GU20173407M3ZASouth Africa2007genomic DNAdrug naive patient12106L,10X,13L,14S,18X,27I,28R,29R,29R_M,41T,54A,58V,71D,91V,116A,120S,124V,148V,154K,169F,178T,180D,187D,199R,203R,204G,208G,210A
GU20173907M4ZASouth Africa2007genomic DNAdrug naive patient12156L,14P,15L,24G,26S,27N,28Q,30W,31E,32G,33F,41T,71D,83L,86A,87Q,91V,96I,110N,116T,135V,148V,154K,169F,177S,187D,191I,207T,208G,210S
GU20174607M7ZASouth Africa2007genomic DNAdrug naive patient12156L,27I,41T,71D,83L,91V,116A,120S,124V,128D,148V,169F,178T,180D,203R,208G,213D
GU20174307M8ZASouth Africa2007genomic DNAdrug naive patient12156L,14S,15L,18T,28D,29R,30S,31R,32L,33E,34S,41T,71D,83T,87P,91V,96L,98D,115V,116A,120A,124V,148V,169F,178T,187D,200S,208G,210S,215T
GU20174707M9ZASouth Africa2007genomic DNAdrug naive patient12156L,14P,15L,27I,41T,71D,91V,116A,124V,128D,148V,154K,169F,178T,180D,187D,202I,203~,207P_W,208V,213K,214L,215L
GU20173307V10ZASouth Africa2007genomic DNAdrug naive patient12146L,20L_L,25S,26I,27~,36I,41T,71D,83L,91L,92V,96P,110N,116A,120S,128D,148V,154K,169F,178T,200S,203R,205L_V,206D,208G
GU20173707V12ZASouth Africa2007genomic DNAdrug naive patient12156L,14P,15L,41T,71D,91V,116A,120G,124V,148V,154K,169F,178T,180D,187D,201F,203R,204G,208G,209X
GU20174207V1ZASouth Africa2007genomic DNAdrug naive patient12156L,8W,27I,41T,71D,89W,91V,116A,120S,128D,148V,154K,169F,171I,187D,191I,201F,204S,206V,207I,208G
GU20170807V2ZASouth Africa2007genomic DNAdrug naive patient12166L,14P,15L,27I,41T,71D,83L,116A,120S,128D,148V,169F,178T,187D,200N,202K,203S,204I,205E,206D,207A,208G
GU20172307V4ZASouth Africa2007genomic DNAdrug naive patient12146A,14S,29A,41T,57P,71D,91V,116A,120G,124V,148V,154K,169F,178T,180D,187D,201F,203R,204G,208G,211X
GU20173207V5ZASouth Africa2007genomic DNAdrug naive patient12136L,14P,27I,29M,41T,71D,83L,116A,120S,128D,141L,148V,155P,169F,176K,178T,187D,188P,195T,203R,208G,213M
GU20173607V6ZASouth Africa2007genomic DNAdrug naive patient12136L,15L,19N,24A,25V,26K,36I,41T,71D,83L,91L,92V,96P,110N,116A,120S,128D,148V,154K,169F,178T,200S,203R,205L_VH,207T,208C
GU20172707V7ZASouth Africa2007genomic DNAdrug naive patient12146L,14P,27I,29Q,41T,71D,83I,91A,96L,107A,116A,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
GU20174507V8ZASouth Africa2007genomic DNAdrug naive patient12146L,27I,41T,71D,83I,87Q,91V,96I,98D,116A,124V,148V,154K,169F,178T,187D,202I,203E,204H,204H_N,205Y,208E
GU20173007V9ZASouth Africa2007genomic DNAdrug naive patient12156A,14S,26E,27S,28R,28R_P,39~,41T,71D,91V,116A,120S,128D,148V,154K,169F,171I,187D,191I,204S,207S,208G

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