<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Fischer (2012) Distinct Evolutionary Pressures Underlie Diversity in Simian Immunodeficiency Virus and Human Immunodeficiency Virus Lineages J. Virol. 86 (24), 13217-13231 (2012) 3.74e-112 24          

Download sequences

AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
JX860407CFU212USA1986genomic DNAsubtype: smm22312P,5Q,6V,7G,9N,10Y,13L,14P,15L,26L,31K,33G,34A,37V,39G,41Q,47C,50Y,52I,54Q,58C,61E,68I,69I,70R,72I,79D,82L,83Q,86~,87Q,88P,92P,93A,96L,98D,111V,112E,116Q,119Y,120R,121Q,122Q,122Q_N,128N,131R,135Q,139Q,141C,146N,149N,153V,154K,162Q,163S,171S,177T,178D,179P,180A,187Q,191I,200L,201V,204G,207M,208N,209P,215L,226Q,230L,231M
JX860408CFU226_F5USA1986genomic DNAsubtype: smm22312P,5Q,6V,7G,9N,10Y,13L,14P,15L,26L,31K,33G,34A,37V,39G,41Q,47C,50Y,52I,54Q,58C,61E,68I,69I,70R,72I,79D,82L,83Q,86~,87Q,88P,92P,93A,96L,98D,111V,112E,116Q,119Y,120R,121Q,122Q,122Q_N,128N,131R,135Q,139Q,141C,146N,149N,153V,154K,162Q,163S,171S,177T,178D,179P,180A,187Q,191I,200L,201V,204G,207M,208N,209P,215L,226Q,230L,231M
JX860411CFU233_F1USA1986genomic DNAsubtype: smm22312P,5Q,6V,7G,9N,10Y,13L,14P,15L,26L,31K,33G,34A,37V,39G,41Q,47C,50Y,52I,54Q,58C,61E,68I,69I,70R,72I,79D,82L,83Q,86~,87Q,88P,92P,93A,96L,111V,112E,116Q,119Y,120R,121Q,122Q,122Q_N,128N,131R,135Q,139Q,141C,146N,149N,153V,154K,162Q,163S,171S,177T,178D,179P,180A,187Q,191I,200L,201V,204G,207M,208N,209P,215L,226Q,230L,231M
JX860413D215USA2005genomic DNAsubtype: smm22312P,5Q,6V,7G,9N,10Y,11I,14P,15L,26L,31K,33G,34A,37V,39G,41Q,47C,50Y,52V,54Q,58C,61E,68I,69I,70R,72I,79D,82L,83Q,86~,87Q,88P,91L,92P,93A,96L,100T,111V,112D,116Q,119Y,120R,121Q,122Q,122Q_N,124V,128N,131R,135Q,139Q,141C,146N,149N,154K,159K,162Q,163S,171S,177T,178D,179P,180A,187Q,191I,200L,201V,204G,207M,208N,209P,215L,226Q,230L,231M
JX860414FTqUSA2006genomic DNAsubtype: smm22312P,5Q,7G,9N,10Y,13L,14P,15L,26L,31K,33G,34A,37V,39G,41Q,47C,50Y,52I,54Q,58C,61D,68I,69I,70R,72I,79D,82L,83Q,86Q,87P,88M,92P,93A,96L,98D,111V,112E,116E,119Y,120R,121Q,122Q,122Q_N,128N,131R,135Q,139Q,141C,146N,149N,153V,154K,162Q,163A,171S,177T,178D,179P,180A,187Q,191I,200V,204G,207M,208N,209P,216S,226Q,230L,231M
JX860415G078USA2004genomic DNAsubtype: smm22312P,5Q,6V,7G,9N,10Y,11T,13L,14P,15L,26L,31R,33G,34A,37V,39G,41Q,47C,50Y,52I,54Q,58C,61E,68I,69I,70R,72I,79D,82L,83Q,86~,87Q,88P,91L,92P,93A,96L,111V,112D,116Q,119Y,120R,121Q,122Q,122Q_N,128N,131R,135Q,139Q,141C,146N,148M,149N,153V,154K,162Q,163S,171C,177T,178D,179P,180A,187Q,191I,200L,201V,204G,207M,208N,209P,215L,226Q,230L,231M
JX860416G932USA2004genomic DNAsubtype: smm22312P,5Q,6V,7G,9N,10Y,11T,13L,14P,15L,26L,31K,33G,34A,37V,39G,41Q,47C,50Y,52I,54Q,58C,61E,68I,69I,70R,72I,79D,82L,83Q,86~,87Q,88P,92P,93A,96L,98D,111V,112E,116Q,119Y,120R,121Q,122Q,122Q_N,128N,131R,135Q,139Q,141C,146N,149N,153V,154K,162Q,163S,171S,177T,178D,179P,180A,187Q,191I,200L,201V,204G,207M,208N,209P,215L,221I,226Q,230L,231M
JX860417M919USA2004genomic DNAsubtype: smm22312P,5Q,6V,7G,9N,10Y,11T,13L,14P,15L,26L,31K,33G,34A,37V,39G,41Q,47C,50Y,52I,54Q,58C,61E,68I,69I,70R,72I,79D,82L,83Q,86~,87Q,88P,92P,93A,96L,98D,111V,112E,116Q,119Y,120R,121Q,122Q,122Q_N,128N,131R,135Q,139Q,141C,146N,148V,149N,154K,162Q,163S,171S,177T,178D,179P,180A,187Q,191I,200L,201V,204G,207M,208N,209P,215L,226Q,230L,231M
JX860418M922USA2004genomic DNAsubtype: smm22312P,5Q,6V,7G,9N,10Y,11T,13L,14S,15L,26L,31K,33G,34A,37V,39G,41Q,47C,50Y,52I,54Q,58C,61E,68I,69V,70R,72I,79D,82L,83Q,86~,87Q,88P,91L,92P,93A,96L,111V,112E,116Q,119Y,120R,121Q,122Q,122Q_N,128N,131R,135Q,139Q,141C,146N,149N,153V,154K,162Q,163S,171S,177T,178D,179P,180A,187Q,191I,200L,201V,204G,207M,208N,209P,210S,215L,226Q,230L,231M
JX860419M923USA2004genomic DNAsubtype: smm22312P,5Q,6V,7G,9N,10Y,13L,14P,15L,26L,31K,33G,34A,37V,39G,41Q,47C,50Y,52I,54Q,58C,61E,68I,69I,70R,72I,79D,82L,83Q,86~,87Q,88P,91L,92P,93A,96L,111V,112E,116Q,119Y,120R,121Q,122Q,122Q_N,128N,131R,135Q,139Q,141C,146N,149N,153V,154K,160S,162Q,163S,171S,177T,178D,179P,180A,187Q,191I,200L,201V,204G,207M,208N,209P,215L,226Q,230L,231M
JX860420M926USA2004genomic DNAsubtype: smm22312P,5Q,6V,7G,9N,10Y,13L,14P,15L,26L,31K,33G,34A,37V,39G,41Q,47C,50Y,52I,54Q,58C,61E,68I,69V,70R,72I,79D,82L,83Q,86~,87Q,88P,91L,92P,93A,96L,111V,112D,116Q,119Y,120R,121Q,122Q,122Q_N,128N,131R,135Q,139Q,141C,146N,148V,149N,154K,162Q,163S,171G,177T,178D,179P,180A,187Q,191I,200L,201V,204G,207M,208N,209P,215L,226Q,230L,231M
JX860421M934USA2004genomic DNAsubtype: smm22312P,5Q,6V,7G,9N,10Y,13L,14P,15L,26L,31K,33G,34A,37V,39G,41Q,47C,50Y,52I,54Q,58C,61E,68I,69V,70R,72I,79D,82L,83Q,86~,87Q,88P,91L,92P,93A,96L,111V,112E,116Q,119Y,120R,121Q,122Q,122Q_N,128N,131R,135Q,139Q,141C,146N,149N,154K,160T,162Q,163S,171G,177T,178D,179P,180A,187Q,191I,200L,201V,204G,207M,208N,209P,215L,226Q,230L,231M
JX860422M935USA2004genomic DNAsubtype: smm22312P,5Q,6V,7G,9N,10Y,11T,13L,14P,15L,26L,31K,33G,34A,37V,39G,41Q,47C,50Y,52I,54Q,58C,61E,68I,69V,70R,72I,79D,82L,83Q,86~,87Q,88P,92P,93A,96L,98D,111V,112E,116Q,119Y,120R,121Q,122Q,122Q_N,128N,131R,135Q,139Q,141C,146N,149N,154K,162Q,163S,171S,177T,178D,179P,180A,187Q,191I,200L,201V,204G,207M,208N,209P,215L,221I,226Q,230L,231M
JX860423M940USA2004genomic DNAsubtype: smm22312P,5Q,6V,7G,9N,10Y,11T,13L,14P,15L,26L,31R,33G,34A,37V,39G,41Q,47C,50Y,52I,54Q,58C,61E,68I,69I,70R,72I,79D,82L,83Q,86Q,87X,88X,91L,92P,93A,96L,111V,112D,116Q,119Y,120R,121Q,122Q,122Q_N,128N,131R,135Q,139Q,141C,146N,148V,149N,153V,154K,162Q,163S,171C,177T,178D,179P,180A,187Q,191I,200L,201V,204S,207M,208N,209P,215L,226Q,230L,231M
JX860424M946USA2004genomic DNAsubtype: smm22312P,5Q,6V,7G,9N,10Y,13L,14P,15L,26L,31K,33G,34A,37V,39G,41Q,47C,50Y,52I,54Q,58C,61E,68I,69V,70R,72I,79D,82L,83Q,86~,87Q,88P,91L,92P,93A,96L,111V,112E,116Q,119Y,120R,121Q,122Q,122Q_N,128N,131R,135Q,139Q,141C,146N,149N,154K,160T,162Q,163S,171G,177T,178D,179P,180A,187Q,191I,200L,201V,204G,207M,208N,209P,215L,226Q,230L,231M
JX860425M947USA2004genomic DNAsubtype: smm22312P,5Q,6V,7G,9N,10Y,11T,13L,14P,15L,26L,31K,33G,34A,37V,39G,41Q,47C,50Y,52I,54Q,58C,61E,68I,69I,70R,72I,79D,82L,83Q,86~,87Q,88P,92P,93A,96L,98D,111V,112D,116Q,119Y,120R,121Q,122Q,122Q_N,128N,131R,135Q,139Q,141C,146N,149N,153V,154K,162Q,163S,171S,177T,178D,179P,180A,187Q,191I,200L,201V,204G,207M,208N,209P,215L,226Q,230L,231M
JX860426M949USA2004genomic DNAsubtype: smm22312P,5Q,6V,7G,9N,10Y,13L,14P,15L,26L,31R,33G,34A,37V,39G,41Q,47C,50Y,52I,54Q,58C,61E,68I,69V,70R,72I,79D,82L,83Q,86~,87Q,88P,91L,92P,93A,96L,111V,112D,116Q,119Y,120R,121Q,122Q,122Q_N,128N,131R,135Q,139Q,141C,146N,149N,153V,154K,162Q,163S,171S,177T,178D,179P,180A,187Q,191I,200L,201V,204G,207M,208N,209P,215L,216S,226Q,230L,231M
JX860427M950USA2004genomic DNAsubtype: smm22312P,5Q,6V,7G,9N,10Y,13L,14P,15L,26L,31K,33G,34A,37V,39G,41Q,47C,50Y,52I,54Q,58C,61E,68I,69I,70R,72I,79D,82L,83Q,86~,87Q,88P,91L,92P,93A,96L,111V,112E,116Q,119Y,120R,121Q,122Q,122Q_N,128N,131R,135Q,139Q,141C,146N,149N,154K,162Q,163S,171S,177T,178D,179P,180A,187Q,191I,200L,201V,204G,207M,208N,209P,210S,215L,221I,226Q,230L,231M
JX860428M951USA2004genomic DNAsubtype: smm22312P,5Q,6V,7G,9N,10Y,11T,13L,14P,15L,26L,31R,33G,34A,37V,39G,41Q,47C,50Y,52I,54Q,58C,61E,68I,69I,70R,72I,79D,82L,83Q,86~,87Q,88V,91L,92P,93A,96L,111V,112D,116Q,119Y,120R,121Q,122Q,122Q_N,124V,128N,131R,135Q,139Q,141C,146N,148M,149N,154K,162Q,163S,171C,177T,178D,179P,180A,187Q,191I,200L,201V,204G,207M,208N,209P,215L,226Q,230L,231M
JX860429M952USA2004genomic DNAsubtype: smm22312P,5Q,6V,7G,9N,10Y,13L,14P,15L,26L,31K,33G,34A,37V,39G,41Q,47C,50Y,52I,54Q,58C,61E,68I,69V,70R,72I,79D,82L,83Q,86~,87Q,88P,91L,92P,93A,96L,111V,112E,116Q,119Y,120R,121Q,122Q,122Q_N,128N,131R,135Q,139Q,141C,146N,149N,154K,162Q,163N,171S,177T,178D,179P,180A,187Q,191I,200L,201V,204G,207M,208N,209P,215L,226Q,230L,231M
JX860430SIVsmCI2Cote d'Ivoire1979genomic DNAsubtype: smm22312P,5Q,6V,7G,9N,10Y,11T,13L,14P,15L,26L,27I,31K,33G,34A,37V,39G,41Q,47C,50Y,52I,54Q,58C,61E,68I,69I,72I,79D,82L,83Q,86X,87X,88V,91L,92P,93A,96L,100S,111V,112D,116Q,120G,122K,124V,128N,131R,135Q,139Q,141C,146N,149N,153V,154K,162Q,163S,171S,177T,178D,179A,180A,187Q,191I,200L,201V,204G,207M,208N,209P,215L,221I,226Q,230L,231M
JX860431SIVsmLIB1Liberia1989genomic DNAsubtype: smm22312P,5Q,6M,7G,9N,10Y,13L,14P,15L,23*,26L,31K,33G,34A,37V,39G,41Q,47C,50Y,52I,54Q,58C,61E,68I,69I,70R,72I,79D,80*,82L,83Q,86~,87Q,88P,89S,92P,93A,96L,111V,112D,116Q,120G,122K,128N,131R,135Q,137R,139Q,141C,146N,149N,153V,154K,162Q,163S,171S,177T,178D,179P,180A,187Q,191I,200L,201V,204G,207M,208N,209P,215L,226Q,230L,231M
JX860432SIVsmSL92ASierra Leone1992genomic DNAsubtype: smm22312P,5Q,6V,7G,9N,10Y,13L,14P,15L,26L,31K,33G,34A,37V,39G,41Q,47C,50Y,52I,54Q,58C,61E,68I,69I,70R,72I,79D,82L,83Q,86~,87Q,88P,91L,92P,93A,96L,111V,112E,116Q,120G,121L,128N,131R,135Q,139Q,141C,146N,148V,149N,154K,162Q,163S,171S,177T,178D,179P,180A,187Q,191I,200L,201V,204G,207M,208N,209P,215L,226Q,230L,231M
JX860433SIVsmSL92BSierra Leone1992genomic DNAsubtype: smm22312P,5Q,6V,7G,8N,9N,10Y,13T,14P,15L,26L,31K,33G,34A,37V,39G,41Q,47C,50Y,52I,54Q,58C,61E,68I,69I,70R,72M,79D,82L,83Q,86R,87G,88Q,89Q,91A,92Q,93P_A,95G,96L,100S,110N,111P,112N,116E,119Y,120R,120R_A,121Q,122N,124V,128D,131R,135Q,139Q,141C,146N,149N,153V,154K,162Q,163S,171S,177T,178D,179P,180A,187Q,191I,200L,201V,204G,207M,208N,209P,215L,226Q,230L,231M

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