<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Zhao (2021) Identification, Genetic Characterization and Validation of Highly Diverse HIV-1 Viruses for Reference Panel Development Viruses 13 (7), 1417 (2021) 1.88e-149 37 36 Naive Plasma Direct PCR Molecular epidemiology

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AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
MN15348405CMBDSH19Cameroon2005genomic RNAsubtype: G12316A,10P,11I,15L,27I,71D,86R,87Q,96I,100S,115V,116R,120S,148V,154K,169F,178T,180D,187D,203R,208G,225S,230I
MN15349206CMACR076Cameroon2006genomic RNAsubtype: CRF01_AE,F2,19,22,3712316L,15L,27I,41T,71D,83L,86A,87Q,91F,92P,93A,96L,98D,116A,120Q,124V,148V,169F,178T,180D,187D,208G,225S,230I
MN15347706CMARC01Cameroon2006genomic RNAsubtype: CRF02_AG12316A,11I,14N,15L,27I,31G,54M,58I,71D,91V,110N,115M,116N,120S,128D,148V,169F,200S,207T,208G,210S
MN15349606CMARC055Cameroon2006genomic RNAsubtype: CRF02_AG, A112316A,11T,14S,15M,27I,54M,58I,71D,83L,92P,120S,128D,148V,169F,183H,200S,207T,208G,225S
MN15349306CMARC09Cameroon2006genomic RNAsubtype: CRF02_AG,A112316A,11T,14S,15M,21S,27I,54M,58I,71D,83T,92P,110N,120G,124V,148V,169F,178T,180D,200S,207T,208G,225S,230I
MN15347906CMARC10Cameroon2006genomic RNAsubtype: CRF02_AG12316V,11T,14N,15L,27I,54M,58I,71D,83T,87R,91L,92P,120S,124V,148V,169F,180D,207T,208G,225S
MN15348006CMARC11Cameroon2006genomic RNAsubtype: CRF02_AG12316A,14P,15M,26A,27I,30R,41T,54M,58I,71D,87Q,92P,96L,120S,135V,148V,154K,162K,169F,171A,178T,188S,200S,207T,208G,230I
MN15348106CMARC13Cameroon2006genomic RNAsubtype: CRF06_xpc12316A,15V,27I,54L,58I,71D,83L,92P,96I,120S,128D,148V,169F,178T,187D,208G,211I
MN15348206CMBDSH13Cameroon2006genomic RNAsubtype: CRF02_AG, G12316A,11T,14S,15M,27I,54M,58I,71D,79D,83T,92P,120S,124V,148V,169F,178T,200S,203R,208G
MT34941906CMLPH19AMCameroon2006genomic RNAsubtype: CRF0212316A,14S,26A,27I,41T,54M,58I,71D,83T,87Q,92P,120S,135V,148V,169F,178T,200S,203R,208G
MN15349106CMLPH19C17Cameroon2006genomic RNAsubtype: A112312V,6A,11T,14S,15L,27I,50T,54M,58I,71D,83L,86I,91V,92P,111T,120S,128D,148V,154K,169F,178T,183G,200S,203R,207A,208G
MN15348908CMARC092Cameroon2008genomic RNAsubtype: CRF02_AG,D,A1,6,22,1912316A,11T,12Y,14S,15L,27I,71D,83T,86Q,87Q,91L,92P,96L,148V,154K,169F,178T,183G,187D,203R,208G,225S
MN15348608CMBDSH131Cameroon2008genomic RNAsubtype: CRF02_AG12316A,11T,14N,15M,27I,54M,58I,71D,83L,92P,120S,121T,128D,148V,154K,169F,178T,183G,187D,200S,207T,208G
MN15348308CMBDSH132Cameroon2008genomic RNAsubtype: F212316L,15L,27I,50S,71D,83L,87Q,96I,110N,116A,120S,124V,148V,154K,169F,183G,187D,208G
MN15348708CMBDSH138Cameroon2008genomic RNAsubtype: CRF22_O1A112313M,6A,15L,31G,33N,54M,58I,71D,83M,91N,92P,116A,120G,124V,148V,169F,178T,180D,200S,207T,208G
MN15348508CMBDSH24Cameroon2008genomic RNAsubtype: F212316L,11M,14N,27I,41T,71D,83L,86A,87Q,91H,92P,93A,116A,120S,124V,148V,154K,169F,177G,178T,180D,187D,203R,208G,210S,230I
MN15348808CMBDSH25Cameroon2008genomic RNAsubtype: D12316L,27I,33N,83L,87Q,96I,116A,120S,124V,148V,180D,205M,208G
MN15349408CMBDSH9Cameroon2008genomic RNAsubtype: CRF02_AG12316A,11T,14S,15M,27I,54M,58I,71D,92P,120S,135V,148V,169F,178T,200S,203R,208G
MN15349508CMNYU1003Cameroon2008genomic RNAsubtype: CRF02_AG12316A,10W,11T,14N,27I,54M,58I,71D,79D,83T,91V,120S,148V,160S,169F,178T,200N,203R,208G
MN15347808CMNYU707Cameroon2008genomic RNAsubtype: CRF02_AG12316A,14P,15M,27I,31G,41T,48V,54M,58I,71D,83T,92P,110N,120G,135V,148V,169F,178T,180D,194S,203R,208G
MN15349008CMNYU997Cameroon2008genomic RNAsubtype: CRF02_AG,A112316A,10W,11I,14N,27I,48A,54M,58I,68I,71D,79D,83T,91V,120S,128D,146C,148V,154K,169F,171V,177G,178T,200S,203R,208G,225S
MN15349710CMLB008Cameroon2010genomic RNAsubtype: CRF02_AG,36,18,A112316A,10W,11I,14T,26A,27I,30R,45D,47C,54M,58I,71D,79D,83T,120S,148V,154K,169F,177S,200S,203R
MN15347510CMLB018Cameroon2010genomic RNAsubtype: CRF18_cpx12316A,11T,14P,15M,16T,26A,27I,30R,54M,58V,71D,79D,83T,87Q,92P,96L,120S,148V,169F,177G,180D,200S,207S,208G
MT34940610CMLB030Cameroon2010genomic RNAsubtype: G12316A,14S,15L,27I,41T,71D,83L,86Q,87Q,96I,110N,116A,120S,148V,154K,169F,178T,180D,187D,203R,207A,208G,225S
MT34940710CMLB040Cameroon2010genomic RNAsubtype: G, BG12316A,10P,15L,41T,71D,83T,86Q,87Q,96I,110N,115V,116A,120G,148V,154K,169F,178T,180D,187D,203R,208G
MT34940910CMLB070Cameroon2010genomic RNAsubtype: CRF0212316A,14S,26A,27I,41T,54M,58I,71D,83T,91V,135V,148V,169F,178T,180D,203R,208G
MT34941010CMLB071Cameroon2010genomic RNAsubtype: CRF2212316A,15L,27I,31G,33N,54M,58I,71D,83I,91N,92P,120G,148V,169F,178T,180D,207T,208G
MT34941110CMLB075Cameroon2010genomic RNAsubtype: CRF0212316A,26A,27I,41T,45D,54M,58I,71D,83L,87Q,92P,96I,120S,135V,148V,169F,178T,203R,208G,230I
MT34941210CMLB077Cameroon2010genomic RNAsubtype: CRF0212316A,10L,11T,14S,15M,41T,54M,58I,71D,91V,132K,135V,136I,148V,169F,178T,183G,187D,200S,203R,208G
MT34940810CMLB088Cameroon2010genomic RNAsubtype: CRF0212316A,10W,11T,14N,27I,36I,48A,54V,58V,71D,79D,83T,86P,120S,128D,148V,169F,178T,200S,203R,208G
MT34941310CMLB092Cameroon2010genomic RNAsubtype: CRF2212316A,15V,27I,31G,33N,54M,58I,71D,87Q,91H,92P,120S,148V,169F,178T,187D,200S,207T,208G
MT34941410CMLB097Cameroon2010genomic RNAsubtype: CRF0212316A,10W,11T,14N,27I,45D,54V,58I,71D,83M,120S,128D,148V,169F,178T,180D,200S,203R,208G
MT34941511CMLB115Cameroon2011genomic RNAsubtype: CRF0212316A,14S,15M,27I,54M,58I,91Y,92P,97K,120S,131R,148V,169F,171A,178T,180D,190M,200S,201M,208G
MT34941611CMMDC211Cameroon2011genomic RNAsubtype: CRF2212316A,11I,15V,31G,33N,54M,58I,71D,91N,92P,96V,116A,120S,148V,169F,178T,200S,203R,207T,208G
MT34941711CMMDC224Cameroon2011genomic RNAsubtype: F212316L,14T,27I,71D,83L,86A,87Q,91V,116A,120S,124V,148V,154K,169F,178T,183G,187D,208G,230I
MT34941811CMMDC241Cameroon2011genomic RNAsubtype: CRF22, A1, 3512314T,6A,11I,12Y,14S,15L,27I,31G,33N,54M,58I,71D,83L,91A,92P,111P,115V,120G,128D,148V,169F,178T,180D,200S,203R,207T,208G
MN15347617CMMDC6542Cameroon2017genomic RNAsubtype: CRF01_AE, F212316L,27I,71D,87Q,92P,96I,116A,120S,124V,148V,169F,183G,187D,208G

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