<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb
#PtsARTSourceCloningStudyType
Nomura (2013) Significant Reductions in Gag-Protease-Mediated HIV-1 Replication Capacity during the Course of the Epidemic in Japan J. Virol. 87 (3), 1465-1476 (2013) 1.61e-169 174 156 Naive Plasma Direct PCR Molecular epidemiology

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AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
JX264247IMS020Japan2007genomic RNA12316L,15L,45D,83L,87Q,91N,92P,96I,116A,148S,194S
JX264248IMS146Japan1992genomic RNA12316A,11T,14P,15L,31G,33N,54M,58I,83I,92P,128D,148V,178T,200S,207T,208G,225S
JX264249IMS257Japan1994genomic RNA12316M,14P,83L,91V,154K,171V,180D
JX264250IMS265Japan1995genomic RNA12316A,14P,15L,31G,33N,54M,58I,92P,96I,128D,148V,178T,200S,207T,208G,225S
JX264251IMS305Japan1996genomic RNA12316L,83L,194S
JX264252IMS348Japan1996genomic RNA12316L,14P,15L,83L,120H,208G
JX264411IMS367Japan1996genomic RNA12316L,15L,41T,83L,154K
JX264253IMS375Japan1996genomic RNA12316L,75DE,83L,120H,208G,216S
JX264254IMS387Japan1996genomic RNA123115L,41T,83L,86P,87Q,91V,96I,98DE,120S,148S,154K,225S
JX264255IMS398Japan1997genomic RNA12316L,14P,83L,86P,87Q,120S,123S,148V,154K,178T,200H,216A,225S
JX264256IMS403Japan1997genomic RNA12316L,27I,36I,41T,75D,79D,83L,86P,87Q,98D,116AG,120S,148V,154K,194S,209P,225GS
JX264257IMS404Japan1997genomic RNA12316L,14S,15L,27I,83L,148V
JX264258IMS414Japan1997genomic RNA12316L,14S,15L,41T,83L,87Q,91N,92P,96L,148S,154K,194S,200N,225S
JX264259IMS417Japan1997genomic RNA12316L,14P,44A,83L,91V,154KR
JX264260IMS441Japan1997genomic RNA12316A,11T,14P,31G,33N,54M,58I,92P,128D,148V,178T,204S,207T,208G,225S
JX264261IMS449Japan1998genomic RNA12316L,15L,27I,83L,87Q,91H,92P,120H,148V,149C,154K,225S
JX264262IMS451Japan1998genomic RNA12316L,83L,91H,92P,116A,194S,230I
JX264263IMS454Japan1998genomic RNA12316IMV,14P,83L,91IV,98DE,116EV,148AT,152DE,154K,171AITV,180D
JX264264IMS457Japan1998genomic RNA12316L,83L,91V,96L,148S,154K,225S
JX264265IMS459Japan1998genomic RNA12316L,83L,91V,154K
JX264266IMS460Japan1998genomic RNA12316L,14P,27I,41T,83L,86P,87Q,91V,96I,98D,116Q,148V,180D,199R,225S
JX264267IMS464Japan1998genomic RNA12316L,15L,83L,86A,87Q,91V,96I,98D,116A,148S,154K,170R,225A
JX264268IMS467Japan1998genomic RNA12316M,14P,83L,154K,171V,187D
JX264269IMS472Japan1998genomic RNA12316L,27I,75D,83L,86T,87Q,91L,208G
JX264270IMS479Japan1999genomic RNA123114P,27I,36I,79D,83L,91V,128D,148V,180D,210S,225S
JX264271IMS484Japan1999genomic RNA12316L,83L,154K,225S
JX264272IMS486Japan1999genomic RNA12316L,83L,87Q,91V,96I,116A,120H,128D,148S,154K,170R
JX264273IMS491Japan1999genomic RNA12316L,27I,83L,86A,87Q,91N,92P,120S,148V,170T,194S,225S,230I
JX264274IMS496Japan1996genomic RNA123183L,136M,154K,194S
JX264275IMS504Japan1999genomic RNA12312IV,6A,14S,15L,31G,33N,54M,58I,86A,87Q,92P,96L,120S,148V,178T,200S,203R,207T,208G,210S,225S
JX264276IMS507Japan2000genomic RNA12316L,83L,86A,87Q,96I,116T,154K,170KR
JX264277IMS509Japan2000genomic RNA123141T,83L,148S,154K,194S
JX264278IMS516Japan2000genomic RNA12316M,83L,86I
JX264279IMS517Japan2000genomic RNA12316L,15L,78V,83L,116A,120S,154K,225S
JX264280IMS525Japan2001genomic RNA12316A,9H,14P,15M,27I,41T,54M,58I,71D,75D,92P,120S,124V,135V,148V,169F,178T,187D,199R,200S,225S
JX264281IMS526Japan2001genomic RNA12316M,83L,96IM,178T
JX264282IMS527Japan2001genomic RNA12316M,83L,178T
JX264283IMS530Japan2001genomic RNA12316L,83L,154K,225S,230I
JX264284IMS531Japan2001genomic RNA12316L,86A,87Q,91H,92P,96I,116A,194S,208G
JX264285IMS536Japan2001genomic RNA12316L,78V,83L,154K
JX264286IMS538Japan2001genomic RNA12316M,14P,83L,225S
JX264287IMS539Japan2001genomic RNA12316M,27I,50S,54L,79D,83L,120S,121T,123A,154K,171V
JX264288IMS540Japan2001genomic RNA12316L,83L,120H,208G
JX264289IMS541Japan2001genomic RNA12316L,83L,148V,180D
JX264290IMS542Japan2001genomic RNA12312V,6L,15L,41T,83L,120H,148V,180D,225S
JX264291IMS543Japan2001genomic RNA12316L,14P,27I,78S,83T,87Q,116A,148V,149G
JX264292IMS549Japan2001genomic RNA12316L,14P,15L,41T,83L,87Q,91V,96I,98D,116A,120H,154K,180D,210S,225S
JX264293IMS551Japan2001genomic RNA12316L,15L,27I,41T,71DE,83L,86A,87Q,91V,96I,116T,148V,154K,180D,210ST
JX264294IMS564Japan2002genomic RNA12312V,6M,14P,41T,83L,154K,171V
JX264295IMS571Japan2002genomic RNA12316L,27I,51E,75D,83L,86AV,87PQ,91H,92P,116A,194S
JX264296IMS572Japan2002genomic RNA12316L,15L,27I,36I,41T,83L,87P,91V,96I,98D,116A,120H,154K,209P,225S
JX264297IMS573Japan2002genomic RNA12316L,15L,41T,78S,83L,87PQ,91H,92P,116A,148S,154K,180D,210S,225A,230I
JX264298IMS574Japan2002genomic RNA123114P,83L,194S
JX264299IMS578Japan2002genomic RNA12316L,14P,44A,83L,86P,87Q,120S,194S,208G,225S
JX264300IMS579Japan2002genomic RNA12316L,83L,87Q,91N,92P,96L
JX264412IMS581Japan2002genomic RNA12316L,14P,27I,41T,83I,86A,87Q,91H,92P,116A,120S,124V,180D
JX264301IMS582Japan2002genomic RNA12316L,83L,91V
JX264302IMS584Japan2002genomic RNA12316M,14P,83L,154K,171V,180D
JX264303IMS587Japan2002genomic RNA12316L,27I,41T,83L,86P,87Q,120S,124V,154K,194S
JX264304IMS589Japan2003genomic RNA12316L,14P,72A,83L,87HQ,91AV,120S,148S,154K
JX264305IMS592Japan2003genomic RNA12316L,36I,83L,116A,128D,136M,225S
JX264306IMS601Japan1994genomic RNA12316L,83L,154KR
JX264413IMS602Japan2003genomic RNA12316L,27I,41T,83L,86P,87Q,120S,124V,154K,194S
JX264307IMS603Japan2003genomic RNA12316L,27I,41T,83L,87Q,91H,92P,96L,116A,120H,124V
JX264308IMS604Japan2003genomic RNA12316A,11I,14N,15L,27I,54M,58I,71D,83L,91V,111P,116A,120S,128D,148V,153V,154K,169F,171I,178T,183G,191I,200S,203R,207S,208G
JX264309IMS610Japan2003genomic RNA12316M,14P,83L,154K,171V
JX264310IMS612Japan2003genomic RNA12316L,83L,87Q,91N,92P,96L,225S
JX264311IMS613Japan2003genomic RNA12316M,14P,27I,50A,79D,83L,87Q,91V,96L,120S,124V,154K
JX264312IMS617Japan2003genomic RNA12316L,14G,27I,36I,41T,71D,79D,83L,91A,120S,135V,148A,180D
JX264313IMS618Japan2003genomic RNA12316L,71D,83L,87P,180D
JX264314IMS621Japan2003genomic RNA12316L,27IV,83L,87Q,91HN,92P,98DE,116A,178ST,194S,208AG
JX264315IMS624Japan2003genomic RNA12316L,14P,41T,44A,83L,86A,87Q,120S,154K,170KR
JX264316IMS625Japan2003genomic RNA12316L,27I,71D,83L,87P,91V,96IM,98D,116AGRT,120S,148V,180D
JX264317IMS626Japan2003genomic RNA12316L,27I,78S,83L,87HP,98D,120S,154KR,225S
JX264318IMS631Japan2003genomic RNA12316L,83L,116AG,180D,200L,204S,208G
JX264319IMS632Japan2004genomic RNA12316L,15L,27I,41T,83L,91N,92P,154K,160S,194S
JX264320IMS637Japan2003genomic RNA12316M,14P,83L,154K,171V
JX264321IMS640Japan2004genomic RNA12316A,14P,27I,83M,86AV,87Q,148V,178T,210S,225S
JX264322IMS642Japan2004genomic RNA12316A,14P,41T,91V,120H,135V,154K
JX264323IMS643Japan2004genomic RNA12316L,27I,83L,87HQ,91N,92P,148V,194S,225S,230I
JX264324IMS648Japan2004genomic RNA12316L,83L,96IM,120H
JX264325IMS649Japan2004genomic RNA12316M,14P,15L,27I,36I,41T,83L,135V,146C,154K,171V,225S
JX264326IMS653Japan2004genomic RNA12316L,27I,83L,91N,92P,148IV,194S,230I
JX264327IMS654Japan2004genomic RNA12316L,27I,41T,83L,86P,87Q,91L,154K,208G
JX264328IMS658Japan2004genomic RNA12316L,27I,83L,87Q,91N,92P,154K,194S,225S
JX264329IMS661Japan2004genomic RNA12316L,15L,27I,36I,83L,116A,120H,128D,136M,148V,178T,225S
JX264330IMS662Japan2004genomic RNA12316L,15L,41T,87Q,91H,92P,116A,120NS,154K,180D
JX264331IMS671Japan2004genomic RNA12316L,14T,15M,27I,83L,91A,116A,128D,136M,154K,178T
JX264414IMS673Japan2004genomic RNA12316L,15L,83L,87Q,91N,92P,116A,148ST,154K,170R,194S,225GS
JX264332IMS675Japan2004genomic RNA12316M,27I,83L,86A,87Q,96I,116T,148V
JX264333IMS679Japan2004genomic RNA12316L,83L,91N,92P,116A,194S,208G,225S,230I
JX264334IMS681Japan2004genomic RNA12316L,14P,44A,83L,86A,87Q,120S,154K,170R
JX264335IMS683Japan2004genomic RNA12316A,87Q,91AV,120H,154K,225S
JX264336IMS689Japan2004genomic RNA12316L,14P,72A,78S,83L,86Q,87Q,91Y,92P,116A,120S,124V,154K,194S
JX264337IMS696Japan2005genomic RNA12316A,14P,15L,31G,33N,54M,58I,71D,83L,92P,128D,148V,149G,178T,200S,207T,208G,225S
JX264338IMS698Japan2005genomic RNA12316L,83L,91V,148S,180D,194S,208AG,225S
JX264339IMS701Japan2005genomic RNA12316L,75D,83L,180D
JX264340IMS702Japan2005genomic RNA12316L,27I,83L,87Q,91N,92P,154K,194S,225S
JX264341IMS708Japan2005genomic RNA12316L,14P,27I,41T,83L,120H,128D,148S,154K,225A
JX264342IMS709Japan2005genomic RNA12316M,83L,110N,180D
JX264343IMS711Japan2005genomic RNA12316L,14P,27I,41T,79DE,83L,86A,87Q,91DHN,92P,116A,120S,124V,148A,180D,225S,230I
JX264344IMS712Japan2005genomic RNA12316L,15L,27I,83L,120H,148V,208G
JX264345IMS715Japan2005genomic RNA12316L,83L,96LM
JX264346IMS716Japan2005genomic RNA12316L,14P,72A,83L,86P,87Q,91Y,92P,116A,120S,124V,154K,194S
JX264416IMS718Japan2004genomic RNA12316L,83L,91N,92P,194S
JX264417IMS719Japan2005genomic RNA12316L,27IV,83L,87Q,91H,92P,116A,180D,208G,225S,230I
JX264347IMS721Japan2005genomic RNA12314R,83L,86A,87HQ,91V,116D,136M,194S,229K,230I
JX264348IMS722Japan2005genomic RNA12316M,14P,50S,54L,79D,83ALSV,120G,123A,154K,171V,180D,225S
JX264349IMS723Japan2005genomic RNA12316L,14P,27I,41T,83L,87Q,91N,92P,110N,120S,154K,194S,225A
JX264350IMS725Japan2005genomic RNA12316L,14P,27I,41T,83L,87Q,91N,92P,120S,154K,194S,225A
JX264351IMS729Japan2005genomic RNA12316L,15L,27I,41T,83M,86A,87Q,91V,96I,98D,116T,120S,148V,152E,154K,180D,225S
JX264352IMS730Japan2005genomic RNA12316L,14P,83L,91N,92P,180D,194S,225S,230I
JX264353IMS735Japan2005genomic RNA12316M,14P,27I,50A,79D,83L,87Q,91V,96L,120S,124V,154K
JX264354IMS738Japan2006genomic RNA12316L,15L,83L,91V,116A,148V,180D,225S,230I
JX264355IMS741Japan2006genomic RNA12316L,14P,15L,27I,83L,86A,87Q,91V,94N,98D,120S,154K,225S
JX264356IMS742Japan2006genomic RNA12316L,41T,83L,87Q,91N,92P,96I,116A,148S,154K,180D,194S,230I
JX264357IMS744Japan2006genomic RNA12316L,14P,15L,27I,71D,83L,86A,87Q,91A,94N,98D,120S,148V,149G,154K
JX264358IMS745Japan2006genomic RNA12316M,14P,83L,154K,171V,180D
JX264359IMS748Japan2006genomic RNA12316L,14P,27I,83L,86A,87Q,91M,94N,96L,98D,120S,148V,180D
JX264360IMS750Japan2006genomic RNA12316L,83L,91N,92P,194S
JX264361IMS754Japan2006genomic RNA12316L,83L,91N,92P,194S,225S,230I
JX264362IMS761Japan2006genomic RNA12316L,14P,72A,83L,86P,87Q,91H,92P,116A,120S,124V,154K,194S
JX264363IMS765Japan2006genomic RNA12316L,83L,87Q,120S,136M
JX264364IMS767Japan2006genomic RNA12316M,14P,83L,154K,171V,180D
JX264418IMS770Japan2006genomic RNA123183L,87Q,116N,120S,136M,154K,194S
JX264365IMS774Japan2006genomic RNA12316L,14P,27I,83M,86A,87Q,91H,92P,116A,120S,124V,148I,180D
JX264419IMS779Japan2006genomic RNA12316L,83L,91N,92P,194S
JX264366IMS780Japan2006genomic RNA12316L,27IV,36L,83L,116A,128DE,136M,148A,154KR,225S
JX264367IMS782Japan1996genomic RNA123183L,87Q,91N,92P,96IM,116A,148S,154K,225S
JX264368IMS800Japan2006genomic RNA12316M,14P,27I,41L,69I,83L,91V,154K,171V,203KR
JX264369IMS802Japan2007genomic RNA12316L,14P,27I,41T,83L,86A,87Q,91H,92P,116A,124V,180D,225S
JX264370IMS806Japan2007genomic RNA12316L,14P,83L,87Q,91N,92P,136M,149G,154K,194S,225S,230I
JX264371IMS815Japan2007genomic RNA12316L,14P,15L,27I,83L,86A,87Q,91V,94N,98D,120S,148V,180D
JX264372IMS823Japan2007genomic RNA12316M,14P,41T,83L,91V,110N,120S,154K,171V,180D
JX264373IMS824Japan2007genomic RNA12316L,14P,27I,41T,83M,86A,87Q,91H,92P,116A,120S,124V,180D
JX264374IMS828Japan2007genomic RNA12316L,15L,27I,41T,75D,83L,87P,91N,92P,116A,148A,154K,225A
JX264375IMS829Japan2007genomic RNA12316M,14P,83L,154K,171V,180D
JX264376IMS830Japan2007genomic RNA12316L,27I,71D,83L,148V,180D
JX264377IMS832Japan2007genomic RNA12316L,83L,87Q,91N,92P,96I,116A
JX264378IMS840Japan2007genomic RNA12316L,15L,83L,120H
JX264379IMS841Japan2007genomic RNA12316L,41T,83L,87Q,91N,92P,93A,96I,116A,154K,180D,194S,230I
JX264380IMS849Japan2007genomic RNA12316L,14P,27I,75D,83L,87Q,91H,92P,116A,148V,149G,154K
JX264381IMS850Japan2008genomic RNA12316L,14P,83I,91H,92P,180D
JX264382IMS852Japan2008genomic RNA12316L,27I,83M,120S,148V,154K,178T,194S,225S,230I
JX264383IMS854Japan2008genomic RNA12316L,14P,72A,83L,91A,120S,154K
JX264384IMS857Japan2008genomic RNA12316L,14P,27I,41T,83L,87Q,91N,92P,110NT,120S,154K,194S,225A
JX264385IMS860Japan2008genomic RNA12316L,83L,87Q,91H,92P,93A,120H,180D,194S,208G
JX264386IMS862Japan2008genomic RNA12316L,27I,75D,83L,86I,154K,225S
JX264387IMS864Japan2008genomic RNA12316L,15L,27I,41T,86P,87Q,91V,96I,116T,120S,148V,149C,154K,180D,199R,225S
JX264388IMS866Japan2008genomic RNA12316M,14P,83L,86A,87Q,91V,120S,154K,171V,180D
JX264389IMS867Japan2008genomic RNA12316L,71D,83L,86A,87Q,92P,96I,116Q,120G,124V,169F,178T,187D,208G
JX264390IMS870Japan2008genomic RNA12316M,14P,83L,154K,171V,180D
JX264391IMS874Japan2006genomic RNA12316L,14P,83L,87Q,91H,92P,120H,194S,230I
JX264392IMS880Japan2008genomic RNA12316L,71D,83L,86A,87Q,92P,96I,116Q,120G,124V,169F,178T,187D,208G
JX264393IMS881Japan2008genomic RNA12316M,14P,83L,154K,171V,180D,210ST,225S
JX264394IMS882Japan2008genomic RNA12316L,27I,83L,87Q,91H,92P,148I,154K,194S
JX264420IMS883Japan2008genomic RNA12316V,12Y,41T,83M,86P,87Q,96I,111P,115M,116T,120S,148A,154K,178T,225S
JX264395IMS892Japan2008genomic RNA12316L,14P,27I,41T,83L,87Q,91N,92P,120S,154K,194S,225AT
JX264396IMS895Japan2008genomic RNA12316L,14P,83L,120HN,128D,154K,171V,183G
JX264397IMS919Japan2008genomic RNA12316L,15L,27I,41T,75D,83M,86A,87Q,91V,96I,98D,116T,120S,148V,152E,154K,180D,225S
JX264398IMS920Japan2008genomic RNA12316L,27I,75D,83L,91H,92P,116A,148I,194S
JX264399IMS921Japan2008genomic RNA12316L,83L,96I,116A,225S
JX264400IMS922Japan2008genomic RNA12316L,10A,15L,83AT
JX264401IMS923Japan2008genomic RNA12316L,33N,83L,87Q,91H,92P,96I,116T,154K,194S,225S,230I
JX264402IMS924Japan2008genomic RNA12316L,14P,16A,41T,72V,79D,83L,91A,96L,120S,135V,136I,148A,208G
JX264403IMS925Japan2008genomic RNA12316L,14P,83L,91N,92P,148AV,149GS,180D
JX264404IMS927Japan2008genomic RNA12316L,83L,87Q,91N,92P,96I,116A
JX264405IMS929Japan2008genomic RNA12316M,14P,83L,96IM,116A,154K,171V
JX264406IMS930Japan2008genomic RNA12316L,14P,27I,41T,83L,87Q,91N,92P,110N,120S,154K,194S,225S
JX264407IMS933Japan2008genomic RNA12316L,27I,41T,83L,87Q,91H,92P,120S,154K,194S,208G
JX264408IMS936Japan2009genomic RNA12316L,27I,41T,78G,83L,86A,87Q,96I,116T,120S,148V,178T,210S
JX264422IMS951Japangenomic RNA12316L,27I,83L,87Q,91N,92P,120S,154K,194S,225S
JX264409IMS955Japan2009genomic RNA12316M,14P,27I,50S,54L,79D,83L,91V,120S,121T,123A,154K,171V
JX264410IMS960Japan2009genomic RNA12316M,14P,78S,79D,83L,87Q,91V,98D,120S,154K,171V,194S