<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Cho (2021) Sequence Length of HIV-1 Subtype B Increases over Time: Analysis of a Cohort of Patients with Hemophilia over 30 Years Viruses 13 (5), 806 (2021) 4.44e-170 31 31 Naive Plasma; PBMC Direct PCR Molecular epidemiology

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AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
MW40534101KBH3South KoreaMar-200117530;16685;16686;16genomic DNAsubtype: D12316L,14P,15L,33N,41T,54S,58A,83L,96L,120S,139Y,148V,149G,154K,207A,208G,210S,225S
MW88160901KBH7South KoreaJul-200117947;17844;17936;17genomic DNAsubtype: D12316L,14P,15L,33N,41T,54S,58A,83L,96L,120S,148V,149G,154K,178T,207A,208G,210S,225S
MW40534203KBH1aSouth KoreaJan-200317849;16695;17858;17genomic DNAsubtype: D12316L,14P,15L,33N,41T,54S,58A,78S,83L,87Q,96I,120S,148V,149G,154K,207A,208G,210S,225S,230I
MW40534303KBH1bSouth KoreaJan-200317850;16696;859;1785genomic DNAa gross deletion of 537 bp covering vif, vpr, andtat gene;subtype: D12316L,14P,15L,33N,41T,54S,58A,83L,96L,120S,148V,149G,154K,178T,207A,208G,210S,225S
MW40533007CSR1South KoreaJan-20073113;3169;3170;3128;genomic DNAsubtype: B123183L,136M
MW40532507KDE12-HP-9South KoreaDec-20074467;6011;7399;7402;genomic DNAsubtype: Korean Subclade B12316L,83L,154K
MW40531511CSR3-17800South KoreaMar-2011genomic DNAsubtype: B12296L,83L,136M,201F,210P,212K,216N,221M,223R,224T,226P,228T
MW40531711CSR3-17803South KoreaMar-2011genomic DNAsubtype: B12316L,83L,136M
MW40533111CSR3aSouth KoreaMar-201117802;17809;8413;178genomic DNAsubtype: B123114P,83L,136M
MW40533211CSR3bSouth KoreaMar-201112446;17809-1;8414;1genomic DNAsubtype: B12316L,83L,136M
MW40533312CSR12South KoreaDec-201212200;11636a;17806;1genomic DNAsubtype: B12316L,83L,136M
MW40532412LJW12-HP-3South KoreaDec-201210882;10884;10872;10genomic DNAsubtype: Korean Subclade B12316L,27I,75D,83L,87Q,91H,92P,116A,208G
MW40531112Lsw3-HP-15-17171South KoreaMar-2012genomic DNAsubtype: Korean Subclade B12316L,9H,27I,54P,82K,83L,90S,94C,97K,208G,211I,225S
MW40532913KYY2South KoreaFeb-201311628;11985;11635;11genomic DNAsubtype: Korean Subclade B123114P,27I,83L,91V,120H,124V,148S,154K,225S
MW40532614KMK2-HP-13South KoreaFeb-201417766;12911;12926;12genomic DNAsubtype: Korean Subclade B12316L,83L,120H,154K,170R,194S
MW40531815CSR6-17710South KoreaJun-2015genomic DNAsubtype: B12316L,15L,83L,136M,208G
MW40533415CSR6aSouth KoreaJun-201517708;17740;17736;17genomic DNAsubtype: B12316L,15L,83L,87Q,91V,136M,178T,208G
MW40533515CSR6bSouth KoreaJun-201517709;17742;17743;17genomic DNAsubtype: B12316L,15L,83L,87Q,136M,208G
MW40533615CSR8South KoreaOct-201517804;17817;17820;17genomic DNAsubtype: B12316L,15L,83L,87Q,91V,136M,208G
MW40533716CSR7South KoreaJul-201617799;17818;17831;17genomic DNAsubtype: B12316L,24I,27L,29Q,42P,46R,50R,51Y,67H,68I,70R,73L,83L,98D,136M,171I,177V,178T,209V
MW40531916CSR7-17798sSouth KoreaJul-2016genomic DNAsubtype: B12316L,83L,136M
MW40530916LJW2-HP-3-17061South KoreaFeb-2019genomic DNAsubtype: Korean Subclade B12316L,27I,75D,83L,87Q,91H,92P,116A,123L,154S,160A,170T,208G
MW40531018SHJ5-HP-10-17773South KoreaMay-2018genomic DNAsubtype: Korean Subclade B1023110I,23*,27I,75K,80*,83L,89R,96I,100K,102N,106R,116R,117*,127E,128K,133*,148V,156R,165I,184*,206R,208G,212K,213D,220R,222E,223R
MW40527618SHJ5-HP-10-17776aSouth KoreaMay-2018genomic DNAsubtype: Korean Subclade B1922521I,26L,27I,30N,35K,36I,43F,45V,46V,50S,51Y,54S,56R,59L,73F,74L,79*,83L,91F,95P,97T,100G,102T,104L,106*,120Y,125L,126L,131N,140T,141S,142L,145F,154I,157L,162I,163Y,166Y,172P,178F,182*,183Y,187H,194V,199L,202F,204I,206*,208R,209T,212*,213Q,217S,219R,220A,223R,225R
MW40530720LJW2-HP-2-17380South KoreaFeb-2002genomic DNAsubtype: Korean Subclade B12312L,3G,6L,27I,73L,75D,83L,87Q,91H,92P,116A,159*,161C,166A,208G
MW40533893MHI10South KoreaOct-19934800;17537;17541;168genomic DNAsubtype: CRF02_AG12316A,11T,14P,15M,27I,41T,54M,58I,71D,92P,110N,120S,135V,148V,169F,178T,200S,203R,208G
MW88161094KBH10South KoreaOct-199417945;17842-2;17863;genomic DNAsubtype: D12316L,14P,15L,33N,54S,58A,83L,87T,120S,148V,149G,180D,203Q,207S,208G,209D,210S,214I,216A,220E,221M,225S
MW40533995KBH4aSouth KoreaApr-199517725;17727;17842;17genomic DNAsubtype: D12316L,14P,15L,33N,54S,58A,83L,87Q,120S,148V,149G,207A,208G,210S,225S
MW40534095KBH4bSouth KoreaApr-199517725;17727;17842-1;genomic DNAsubtype: D12316L,14P,15L,33N,54S,58A,83L,87Q,120S,148V,149G,207A,208G,210S,225S
MW40532797JHS8a-HP-18South KoreaOct-19974828;17771;17779;987genomic DNAsubtype: Korean Subclade B12316L,83L,208G
MW40532897JHS8b-HP-18South KoreaOct-199717772;17777;9870;177genomic DNAsubtype: Korean Subclade B12316L,83L,187D,208G

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