<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Han (2013) High Prevalence of HIV-1 Intersubtype B'/C Recombinants among Injecting Drug Users in Dehong, China PLoS ONE 8 (5), E65337 (2013) 1.31e-167 88 95 Uncertain Plasma Direct PCR; SGS Molecular epidemiology

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AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
KC18910405YNLC186China2005genomic RNA12316L,14P,27I,41T,67E,68I,71D,83L,91V,116A,120S,124V,128D,148V,154K,169F,178T,180D,187D,203R,210S,225S
KC89900205YNRL01sgChina2005genomic RNA12316L,14P,41T,71D,83L,110S,116A,120A,121T,124V,128D,154K,169F,178T,180D,187D,203R,208G,210S,211I
KC18910505YNRL035China2005genomic RNA12316L,14P,44A,83L,91V,148S,180D,225S
KC18910605YNRL043China2005genomic RNA12316L,68I,71D,83L,91N,116A,120S,123PR,124V,128D,169F,178T,180D,187D,203R,208G,210S,211I,225S
KC89900005YNRL05sgChina2005genomic RNA12316L,14P,41T,71D,83L,86I,91V,110S,116A,120G,124V,128D,169F,178T,180D,187D,203R,208G,225S
KC89897505YNRL07sgChina2005genomic RNA12316L,68I,71D,83L,91N,110S,116A,120S,124V,128D,154K,169F,178T,180D,187D,203R,208G,210S,211I,225S
KC89897605YNRL08sgChina2005genomic RNA12316L,14P,41T,68I,71D,83L,91N,92P,116A,120S,123A,124V,128D,154K,169F,178T,180D,187D,200N,203R,208G,210S,211I,225S
KC89897705YNRL09sgChina2005genomic RNA12316L,14P,44A,68I,71D,83L,110S,116A,120S,124V,128D,154K,169F,178T,180D,187D,203R,208G,210S,211I,225S
KC18910705YNRL17China2005genomic RNA12316L,14P,41T,71D,75D,83L,116A,120S,124V,128D,154K,169F,178T,180D,187D,203R,208G,210S,211I,225S
KC89900605YNRL17sgChina2005genomic RNA12316L,14P,41T,71D,75D,83L,116A,120S,124V,128D,154K,169F,178T,180D,187D,203R,208G,210S,211I,225S
KC18910805YNRL19China2005genomic RNA12316L,14P,71D,83L,91V,110S,116A,120S,124V,128D,154K,169F,178T,180D,187D,203R,208G,210S,211I,225S
KC89897805YNRL20sgChina2005genomic RNA12316L,14P,41T,71D,75D,83L,116A,120S,124V,128D,154K,169F,178T,180D,187D,203R,208G,210S,211I,225S
KC89897905YNRL25sgChina2005genomic RNA12316L,68I,71D,83L,116A,120S,124V,128D,154K,169F,178T,180D,187D,203R,208G,210S,211I,225S
KC18910905YNRL34China2005genomic RNA12316L,14P,71D,83L,110S,116A,120G,124V,128D,154K,169F,178T,180D,187D,203R,208G,210S,211I,225S,230I
KC18911006YNLC002China2006genomic RNA12316L,14P,27I,41T,71D,83L,110N,116A,120G,124V,128D,154K,169F,178T,180D,203R,208G,210S,225S
KC18911106YNLC005China2006genomic RNA12316L,14P,83L,180D,225S,230I
KC18911206YNLC007China2006genomic RNA12316L,14P,83L,91V,128D,148S,154K,180D,225S,230I
KC18911306YNLC016China2006genomic RNA12316L,15L,31S,41T,71D,83L,91A,110S,116A,120S,128D,154K,169F,171C,178T,180D,187D,203R,207A,208G,225S
KC18911406YNLC019China2006genomic RNA12316L,14P,83L,91V,128D,180D,225S,230I,231M
KC18911506YNLC021China2006genomic RNA12316L,14P,79D,83L,91V,148A,180D,225S,230I
KC18911606YNLC027China2006genomic RNA12316L,14P,41T,83L,91V,123A,180D,209C,225S,230I
KC89898006YNLC028sgChina2006genomic RNA12316L,14P,41T,71D,83L,87P,116A,120G,124V,128D,169F,178T,180D,187D,203R,210S,225S
KC18911706YNLC030China2006genomic RNA12316L,14P,79D,83L,148S,154K,180D,225S
KC18911806YNLC031China2006genomic RNA12316L,14P,15L,41T,83L,87Q,91V,96I,98D,120H,180D,203R,230I
KC18911906YNLC032China2006genomic RNA12314R,14P,41T,79D,83L,87P,91V,116D,120H,148S,154K,180D,203R,225S
KC18912006YNLC038China2006genomic RNA12316L,10K,14P,41T,71D,83L,91V,107S,116A,120G,124V,128D,148S,154K,169F,180D,187D,203R,208G,225S
KC18912106YNLC040China2006genomic RNA12312V,6L,14P,41T,83L,91V,180D,225S,230I
KC18912206YNLC045China2006genomic RNA12313G,5K,6L,14P,27L,33T,35*,45Q,51H,79D,83L,148S,180D,225S
KC18912306YNLC049China2006genomic RNA12316L,14P,27I,41T,71D,83L,91V,96L,115V,116A,120A,124V,128D,148V,154K,169F,171C,178T,187D,207S,208G,210S,211I,225S
KC18912406YNLC051China2006genomic RNA12316L,14P,83L,87Q,91V,120S,123A,154K,180D,199R,225S
KC18912506YNLC052China2006genomic RNA12316L,14P,41T,71D,83L,91V,116A,120G,124V,154K,169F,178T,180D,187D,203R,208G,225S
KC18912606YNLC053China2006genomic RNA12316L,14P,18G,41A,83M,91V,132K,148S,172I,180D,185I,225S,230I
KC18912706YNLC054China2006genomic RNA12316L,14P,41T,79D,83L,148S,180D,203R,225S
KC18912806YNLC055China2006genomic RNA12313L,6L,14P,15L,41T,83L,87Q,91V,96V,116A,120H,180D,207S,208G,210S,211I,225S
KC18912906YNLC26China2006genomic RNA12316L,14P,83L,91V,148S,160S,180D,225S,230I
KC89898106YNRL106sgChina2006genomic RNA12316L,14P,71D,83L,91V,116A,120S,124V,128D,154K,169F,178T,180D,187D,203R,208G,210S,211I,225S
KC18913006YNRL115China2006genomic RNA12313M,6L,9R,15V,18T,27I,33I,35Q,41T,45*,63H,67L,71D,83L,87Q,91A,94R,95R,97I,101R,104V,110S,116A,120S,124V,128D,154K,169F,178T,187D,203R,208G,225S
KC89898207YNLC08sgChina2007genomic RNA12316L,14P,71D,116A,120S,124V,128D,154K,169F,178T,180D,203R,208G,210S,211I,225S
KC89900107YNLC13sgChina2007genomic RNA12316L,14P,71D,83L,116T,120G,124V,128D,154K,169F,178T,180D,187D,203R,208G,210S,211I,225S
KC89898307YNLC18sgChina2007genomic RNA12316L,14P,79D,83L,87Q,91V,148S,160S,180D,225S
KC89900707YNLC22sgChina2007genomic RNA12316L,14P,44A,83L,91V,180D,225S
KC89898409YNLC10sgChina2009genomic RNA12316L,14P,41T,83L,87Q,91N,92P,120S,123A,154K,180D,199R,225S
KC89898509YNLC216002sgChina2009genomic RNA12316L,14P,41T,79D,83L,120S,148A,154KR,180D,225S
KC18913209YNLC216003China2009genomic RNA12316L,14P,71D,83L,91V,116A,120G,121A,122T,124V,128D,154K,169F,178T,180D,187D,203R,208G,210S,211I,225S
KC18913309YNLC216004China2009genomic RNA12316L,14P,15L,41T,71D,83L,110S,116A,120G,124V,154K,169F,171V,178T,180D,187D,203R,210S,225S,230I
KC18913409YNLC216005China2009genomic RNA12316L,14P,41T,71D,83L,96L,110S,116A,120S,124V,128D,154K,169F,178T,180D,187D,203R,208G,225S
KC18913509YNLC216018China2009genomic RNA12313M,4H,6L,9K,10L,12R,14P,15L,18T,27G,33N,41T,45K,71A,83L,84P,91V,116A,120G,124V,154K,169F,178T,180D,187D,203R,208G,225S
KC89898609YNLC216027sgChina2009genomic RNA12316L,14P,41T,83L,91V,128D,148S,154K,180D,225S,230I
KC18913609YNLC216029China2009genomic RNA12316L,14P,41T,83L,91V,128D,180D,208G,225S
KC89898709YNLC216031sgChina2009genomic RNA12316L,14P,27I,41T,71D,91V,116A,120G,122Q,124V,128D,148I,154K,169F,178T,180D,187D,203R,210S,225S
KC89898809YNLC216036sgChina2009genomic RNA12316L,14P,32L,58S,83L,91V,180D,213D,216I,225S
KC18913709YNLC216038China2009genomic RNA12316L,14P,83L,91V,160S,180D,225S
KC18913809YNLC216043China2009genomic RNA12316L,14P,83L,91V,148V,172I,177P,179P,180D,184R,189S,199N,202I,203I,205S,208P,209P,211S,214V,225S,227N
KC18913909YNLC216053China2009genomic RNA12316L,14P,79D,83L,91V,148S,160S,180D,225S
KC18914009YNLC216055China2009genomic RNA12316A,14P,15M,31G,54M,58I,92P,128D,148V,156R,158T,168W,170N,172I,177P,178T,179P,180Q,184R,187A,189M,192L,194K,197A,200S,203I,208G,210S,225S
KC89898909YNLC492sgChina2009genomic RNA12316L,14P,41T,71D,83L,91V,110S,116A,120S,124V,128D,169F,178T,180D,187D,203R,208G,225S
KC89899009YNLC494sgChina2009genomic RNA12316L,14P,41T,83L,91N,92P,154K,180D,199R,225S
KC89899109YNLC496sgChina2009genomic RNA12316L,83L,180D,208V,225S
KC89899209YNLC497sgChina2009genomic RNA12316L,14P,27I,41T,71D,83L,91P,96L,116A,124V,128D,148V,169F,178T,180D,187D,203R,208G,225S
KC89899309YNLC499sgChina2009genomic RNA12316L,14P,71D,83L,91V,96L,110S,116A,120A,124V,128D,148I,154K,169F,178T,180D,187D,203R,208G,210S,211I,225S
KC89899409YNLX047sgChina2009genomic RNA12316L,14P,71D,83L,91V,116A,120S,124V,128D,154K,169F,178T,180D,187D,203R,208G,210S,211I,225S
KC89899509YNLX090sgChina2009genomic RNA12316L,14P,41T,63P,71D,83L,116A,124V,128D,169F,178T,180D,187D,203R,208G,210S,225S
KC89899609YNLX133sgChina2009genomic RNA12316L,14P,41T,71D,83L,115V,116A,120G,124V,128D,154K,169F,170R,171V,178T,180D,187D,203R,210S,225S
KC89900809YNLX19sgChina2009genomic RNA12316L,14P,79D,83L,91V,148S,160S,180D,225S
KC18913109YNLX219003China2009genomic RNA12316L,14P,41T,71D,83L,116A,120G,124V,128D,154K,169F,178T,187D,203R,210S,215T,225S
KC18914109YNLX219006China2009genomic RNA12316L,14P,41T,71D,72A,83L,91IV,116A,118I,120G,124V,154K,169F,178T,180D,187D,203R,208G
KC18914209YNLX219028China2009genomic RNA12316L,14P,41T,71D,83L,110S,116A,120S,124V,128D,169F,178T,180D,187D,203R,208G,210S,225S
KC89900909YNLX219037sgChina2009genomic RNA12316L,14P,71D,83L,91V,116A,120G,121A,122T,124V,128D,154K,169F,178T,180D,187D,203R,208G,210S,211I,225S
KC18914309YNLX219051China2009genomic RNA12316L,14P,18T,27G,33N,41T,71D,83L,110S,116A,124V,128D,154K,169F,178T,180D,187D,203R,210S,225S
KC18914409YNLX219053China2009genomic RNA12316L,14P,83L,91V,180D,225S,230I
KC89899709YNLX227203sgChina2009genomic RNA12316L,14P,16T,41T,83L,91V,120S,154K,180D,225S,230I
KC18914509YNRL215005China2009genomic RNA12316L,14P,71D,83L,86I,110S,116A,120S,124V,128D,154K,169F,178T,180D,187D,203R,208G,210S,211I,225S
KC89899809YNRL215009sgChina2009genomic RNA12316L,14P,83L,91V,180D,225S,230I
KC18914609YNRL215012China2009genomic RNA12313M,6L,18T,27I,33I,35Q,41T,45*,71D,83L,86L,112H,116A,120S,124V,128D,140I,154K,169F,171V,178P,187D,194S,203R,225S
KC18914709YNRL215013China2009genomic RNA12316L,14P,71D,78V,83L,86I,96I,116T,120G,123LP,124V,128D,147L,154K,166V,169F,177T,178T,186P,187D,200A,203R,208G,210S,211I,225S
KC89901009YNRL215025sgChina2009genomic RNA12316M,14P,16T,41T,83L,91A,96I,120S,154K,225S
KC18914809YNRL215030China2009genomic RNA12316L,14P,43I,45G,46R,54N,71D,83L,91V,110S,116A,120G,124V,128D,154K,169F,178T,180D,187D,203R,208G,210S,211I,225S
KC89901109YNRL215042sgChina2009genomic RNA12316L,14P,91V,180D,210S,225S
KC89901209YNRL215050sgChina2009genomic RNA12316L,14P,27I,41T,71D,83L,91H,92V,116A,120S,124V,128D,148V,169F,178T,180D,187D,203R,208G,225S
KC18914909YNYJ217006China2009genomic RNA12316L,14P,71D,83L,110S,116A,120S,124V,128D,154K,169F,178T,180D,203R,208G,210S,211I,225S,229G
KC89901309YNYJ217010sgChina2009genomic RNA12316L,14P,83L,91V,180D,225S,230I
KC18915009YNYJ217013China2009genomic RNA12316L,14P,15L,41T,71D,83L,107S,110S,116A,120G,124V,128D,154K,169F,178T,180D,187D,203R,210S,225S
KC89901409YNYJ217016sgChina2009genomic RNA12316L,14P,31AP,41T,71D,75D,83L,110S,116A,120S,124V,128D,154K,169F,178T,180D,187D,203R,208G,210S,211I,225S
KC18915109YNYJ217036China2009genomic RNA12316L,27I,41T,71D,83I,91IV,116A,120A,124V,169F,178T,187D,203R,208G,225S
KC18915209YNYJ217040China2009genomic RNA12316L,41T,71D,83L,91V,98D,116T,120S,124V,128D,136M,169F,178T,180D,187D,203R,208G,225S
KC18915309YNYJ217055Chinagenomic RNA12316L,14P,71D,83L,91V,110S,116A,120S,124V,128D,148I,154K,169F,178T,180D,187D,203R,208G,210S,211I,225S
KC89899909YNYJ473sgChina2009genomic RNA12316L,14P,27I,83L,91V,123A,148V,180D,225S,230I
KC89901509YNYJ479sgChina2009genomic RNA12316L,14P,71D,83L,91V,116A,120S,124V,128D,148S,154K,169F,178T,180D,203R,208G,210S,211I,225S

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