<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Vergne (2016) Biological and genetic characteristics of HIV infections in Cameroon reveals dual group M and O infections and a correlation between SI-inducing phenotype of the predominant CRF02_AG variant and disease stage Virology 310 (2), 254-266 (2003) 2.42e-169 91 49 Mixed Plasma; PBMC Direct PCR Molecular epidemiology

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AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
AJ55501401CM.MP1538Cameroongenomic DNAp24 sequence12246A,54M,58I,71D,83T,92P,120G,124V,131R,148V,169F,178T,183G,187D,200N,203R,208G,210S
AJ55501501CM.MP1539Cameroongenomic DNAp24 sequence12316A,11T,15L,27I,31G,33N,54M,58I,71D,79D,92P,110N,120S,148V,169F,200S,207T,208G
AJ55501601CM.MP1540Cameroongenomic DNAp24 sequence12262Y,3R,6A,11T,14N,15M,27I,54M,58I,71D,110N,120S,148V,169F,183G,187D,200S,208G,210N,226P
AJ55501701CM.MP1541Cameroongenomic DNAp24 sequence12196A,27I,41T,54M,58I,71D,83T,92P,120S,135V,148V,169F,178T,187G,188N,203R,208G,217S
AJ55501801CM.MP1544Cameroongenomic DNAp24 sequence12306A,10P,11I,15M,26A,27I,41T,54M,58I,71D,83M,86A,87Q,91V,120S,148V,169F,178T,183H,200S,203R,208G,225X
AJ55501996CM.MP339Cameroongenomic DNAp24 sequence22196A,11P,14G,27I,54M,58I,71D,87Q,92P,96I,98D,120S,128D,148V,169F,178T,200S,207T,208G
AJ55502096CM.MP522Cameroongenomic DNAp24 sequence12276A,14S,15M,27I,31G,41T,54M,58I,71D,83A,86M,87Q,91L,92P,96I,120S,135V,148V,169F,177C,178T,180D,194S,200S,203R,208G,225S
AJ55502196CM.MP540Cameroongenomic DNAp24 sequence22236A,11T,14N,15M,27I,54M,58I,71D,83T,91T,115V,120S,148V,169F,178T,200S,203R,209P,210S
AJ55504897CM.K1065Cameroongenomic DNAp24 sequence12305X,6A,11I,14N,15L,27I,31G,54M,58I,71D,83L,92P,98D,111P,120S,128D,148V,154K,169F,178T,200S,203R,207T,208G
AJ55504397CM.K1068Cameroongenomic DNAp24 sequence12316A,71D,83I,86P,87Q,88V,92P,96I,116R,120S,148V,169F,178T,183G,187D,203R,208G,225X
AJ55508597CM.K1102Cameroongenomic DNAp24 sequence32255T,6F,15L,27I,33N,83L,91A,120S,148V,178T,191I,208G,220E,225T
AJ55507697CM.K1103Cameroongenomic DNAp24 sequence12316A,11I,14S,27I,50G,54M,58I,71D,91N,92P,96L,120G,128D,148V,169F,171A,178T,180D,200S,207T,208G,225S
AJ55507297CM.K1107Cameroongenomic DNAp24 sequence12316A,11I,14N,15L,27I,54M,58I,71D,92P,111P,116A,120S,124V,128D,148V,169F,200S,203R,208G,225X
AJ55506097CM.K1110Cameroongenomic DNAp24 sequence12316A,11T,14S,27I,54M,58I,71D,75D,92P,120S,135V,148V,169F,178T,200S,203R,208G,225S
AJ55505997CM.K1112Cameroongenomic DNAp24 sequence12316A,11T,14N,15L,27I,54M,58I,71D,120S,148V,169F,178T,200S,207T,208G
AJ55507497CM.K1123Cameroongenomic DNAp24 sequence22286A,14N,27I,54M,58I,71D,79D,83T,91V,96L,115V,120S,124V,148V,169F,178T,200S,203R,208G,217S,225S
AJ55506997CM.K1131Cameroongenomic DNAp24 sequence12316A,14S,27I,54M,58I,71D,83I,96I,120H,128D,148V,169F,171A,178T,180D,200S,207V,208G
AJ55504597CM.K1143Cameroongenomic DNAp24 sequence12306A,11T,14S,15L,27I,31G,33N,54M,58I,71D,83L,92P,120S,128D,148V,154K,169F,178T,187D,200S,207T,208G,225X
AJ55508897CM.K1191Cameroongenomic DNAp24 sequence72317S,14P,27I,71D,79D,83L,87Q,88V,92P,96I,116A,120S,124V,148V,154K,169F,171C,178T,183G,187D
AJ55502497CM.MP568Cameroongenomic DNAp24 sequence22316A,11I,14P,15M,27I,54M,58I,71D,92P,110N,120S,128D,148V,169F,178T,183G,203R,208G
AJ55502297CM.MP569Cameroongenomic DNAp24 sequence12266A,11I,14P,15M,27I,41T,54M,58I,71D,83T,87Q,91F,92P,128D,148V,169F,178T,199R,200S,203R,208G
AJ55502397CM.MP570Cameroongenomic DNAp24 sequence12266A,11T,14S,15M,27I,54M,58I,71D,83M,120S,148V,169F,171A,178T,180D,200S,207T,208G
AJ55502597CM.MP573Cameroongenomic DNAp24 sequence12316A,14S,15M,27I,54M,58I,71D,92P,120S,135V,148V,154K,169F,171V,177G,178T,190M,203R,204G,208G,225S
AJ55502697CM.MP578Cameroongenomic DNAp24 sequence22286A,11T,14N,15M,27I,54M,58I,71D,83T,92P,120S,128D,148V,169F,178T,183S,190M,200S,203R,208G,225X
AJ55502797CM.MP581Cameroongenomic DNAp24 sequence12306A,11T,14N,41T,54M,58I,71D,91A,96I,116A,120S,128D,148V,169F,178T,180D,200S,203R,208G
AJ55502897CM.MP582Cameroongenomic DNAp24 sequence1122614T,15L,27I,54M,58I,71D,83L,92P,111P,116A,120G,124V,128D,148V,154K,169F,178T,183G,200S,203R,207T,208G,226Q
AJ55509497CM.MP584Cameroongenomic DNAp24 sequence1321814S,15M,27I,41T,54M,58I,71D,75D,83T,92P,116A,118I,120G,135V,148V,169F,178T,187D,200S,203R,208G
AJ55502997CM.MP631Cameroongenomic DNAp24 sequence12316A,14N,27I,45D,54M,58I,71D,83L,115V,116A,120S,128D,148V,169F,178T,180D,207T,208G
AJ55503097CM.MP635Cameroongenomic DNAp24 sequence22312L,6A,11T,14S,15M,27I,54M,58I,71D,83M,110N,120S,148V,169F,187D,200S,203R,208G,230I
AJ55503197CM.MP638Cameroongenomic DNAp24 sequence12316A,27I,41T,54M,58I,71D,92P,94N,120G,124V,135V,148V,169F,178T,208G
AJ55503297CM.MP640Cameroongenomic DNAp24 sequence12216A,11I,14S,15L,27I,54M,58I,71D,83L,87Q,92P,96L,111P,120G,128D,148V,154K,169F,171C,178T,183G,200S,203R,207S,208G
AJ55503397CM.MP642Cameroongenomic DNAp24 sequence12186A,27I,54M,58I,71D,83T,92P,116A,120S,124V,135V,148V,169F,178T,179L,203R,208G
AJ55503497CM.MP643Cameroongenomic DNAp24 sequence12316A,11T,14N,15M,27I,54M,58I,71D,83T,92P,120S,148V,169F,178T,199R,200S,208G
AJ55503797CM.MP646Cameroongenomic DNAp24 sequence1023114N,27I,54M,58I,71D,72A,83T,120S,148V,169F,178T,200S,207T,208G
AJ55503897CM.MP650Cameroongenomic DNAp24 sequence12316A,11I,14N,27I,45D,54V,58I,71D,83L,91V,115V,120S,128D,148V,169F,178T,187D,200S,208G
AJ55503997CM.MP653Cameroongenomic DNAp24 sequence12316A,11T,14S,54M,58I,71D,83L,110N,116A,120G,128D,148V,169F,178T,180D,200S,203R,208G
AJ55504097CM.MP681Cameroongenomic DNAp24 sequence12316A,11T,12Y,14N,15M,27I,47C,54M,58I,71D,79D,83T,115V,120S,148V,169F,178T,191I,200S,207T,208G,216S
AJ55504197CM.MP689Cameroongenomic DNAp24 sequence12316A,15M,27I,33N,41T,54M,58I,71D,83T,92P,116A,120A,124V,135V,148V,169F,178T,200S,203R,208G,225X
AJ55504297CM.MP690Cameroongenomic DNAp24 sequence12316A,11T,14T,15M,27I,54M,58I,71D,83L,91V,115V,120S,128D,148V,169F,178T,200S,207T,208G
AJ55503597CM.MP696Cameroongenomic DNAp24 sequence12316A,11T,15M,27I,41T,54M,58I,71D,87Q,92P,96I,98D,116Q,120S,148V,169F,178T,180D,203R,208G
AJ55503697CM.MP703Cameroongenomic DNAp24 sequence12276A,14S,15M,27I,54M,58I,71D,83T,92P,120G,122Q,124V,128D,131R,148V,154K,169F,178T,180D,200S,203R,208G,225A,226I
AJ55504497CM.MP704Cameroongenomic DNAp24 sequence12206A,13N,14P,15M,54M,58I,71D,92P,120S,128D,169F,178T,191I,200S,207T,208G
AJ55506698CM.K1097Cameroongenomic DNAp24 sequence22286A,27I,54M,58I,71D,92P,118I,120G,148V,154K,169F,177G,178T,190M,203R,208G,225X
AJ55506598CM.K1153Cameroongenomic DNAp24 sequence12316A,15V,27I,54M,58I,71D,83L,92P,120S,128D,148V,169F,178T,208G,213D,219X
AJ55509198CM.K1161Cameroongenomic DNAp24 sequence22286A,15V,31G,33N,54M,58I,71D,83M,91N,92P,116A,120S,124V,148V,169F,178T,183H,200S,207T,208G
AJ55505498CM.K1162Cameroongenomic DNAp24 sequence12266A,11T,14S,15M,27I,31G,54M,58I,71D,92P,110N,115M,120S,135V,148V,169F,190M,200S,203R,208G
AJ55507098CM.K1163Cameroongenomic DNAp24 sequence12316A,15V,27I,54M,58I,71D,83T,92P,120S,135V,148V,169F,178T,203R,208G
AJ55509098CM.K1167Cameroongenomic DNAp24 sequence22286A,71D,83L,86P,87Q,92P,96I,116R,120S,148V,169F,178T,183G,187D,203R,208G,225S
AJ55505798CM.K1169Cameroongenomic DNAp24 sequence12316A,14S,27I,41T,54M,58I,71D,83T,91V,128D,148V,169F,178T,180D,203R,208G,225S,228X,230I
AJ55508498CM.K1176Cameroongenomic DNAp24 sequence12316L,15L,27I,83L,116A,148V,180D,208G
AJ55509398CM.K1183Cameroongenomic DNAp24 sequence12316A,15L,31G,33N,54M,58I,71D,91N,92P,110N,120S,148V,169F,177C,178T,187D,200S,207T,208G
AJ55507798CM.K1189Cameroongenomic DNAp24 sequence12166A,10W,11T,14S,15M,27I,54M,58I,71D,92P,110N,120S,135V,148V,169F,178T,200S,203R,208G
AJ55505398CM.K1194Cameroongenomic DNAp24 sequence12316A,15V,27I,54M,58I,71D,83T,92P,120S,135V,148V,169F,178T,203R,208G,225INST
AJ55500698CM.K1211Cameroongenomic DNAp24 sequence12316A,11T,14G,15M,27I,54M,58I,71D,92P,120S,148V,154K,169F,178T,183G,187D,203R,208G,225H
AJ55504698CM.K1229Cameroongenomic DNAp24 sequence22316A,14P,15L,31G,33N,41T,54M,58I,71D,83I,87Q,91Y,92P,96L,98D,110N,112A,116Q,120S,128D,131R,135V,148V,169F,178T,180D,191I,200S,203R,207T,208G
AJ55505898CM.K1230Cameroongenomic DNAp24 sequence12316A,11T,14S,15M,27I,50G,54M,58I,71D,83T,86I,87Q,91L,92P,96I,111T,115M,116A,120S,139H,148V,169F,178T,180D,187D,200S,203R,208G
AJ55505698CM.K1243Cameroongenomic DNAp24 sequence12316A,14T,15M,27I,58I,68I,71D,75D,78L,79D,83T,92P,96I,110N,116A,120A,121T,128D,148V,169F,171A,174S,180D,187D,200S,207T,208G,211I,225S
AJ55505198CM.K1245Cameroongenomic DNAp24 sequence12316A,11T,14N,15L,54M,58I,71D,83L,87Q,91V,120S,128D,148V,154K,169F,178T,187D,200S,208G,226L,228Q,229E
AJ55508698CM.K2001Cameroongenomic DNAp24 sequence722214N,16X,18K,27I,71D,83L,87Q,92P,97K,110N,116A,120S,124V,137R,148V,154K,162K,169F,178T,183G,185I,187D,206R,208K,222R
AJ55505598CM.K2002Cameroongenomic DNAp24 sequence12316A,11T,14P,15M,27I,41T,54M,58I,71D,83I,91V,110N,120S,135V,148V,169F,178T,180D,203R,208G
AJ55506798CM.K2007Cameroongenomic DNAp24 sequence12266A,11I,54M,58I,71D,75D,83I,91V,92P,120S,135V,148V,169F,177G,178T,203R,208G
AJ55507898CM.K2022Cameroongenomic DNAp24 sequence12316A,11T,14S,15M,27I,54M,58I,71D,83I,120S,148V,169F,178T,183S,200S,207T,208G
AJ55500498CM.MP1032Cameroongenomic DNAp24 sequence12206A,11T,12Y,13N,14P,15L,16T,27I,31G,71D,92P,110N,120S,148V,154K,169F,178T,203R,208G
AJ55500598CM.MP1071Cameroongenomic DNAp24 sequence12206A,14S,27I,54M,58I,71D,79D,83L,86A,92Q,120S,128D,148V,169F,171A,178T,180D,200S,207T,208G
AJ55506199CM.K1228Cameroongenomic DNAp24 sequence12316A,11T,12Y,27I,41T,54M,58I,71D,75D,83A,87Q,92P,111I,120S,135V,148V,169F,178T,203R,208G,225S
AJ55507199CM.K1239Cameroongenomic DNAp24 sequence12316A,11T,12Y,14N,15M,27I,54M,58I,71D,83I,92P,120S,128D,148V,169F,171I,199R,200S,207S,208G
AJ55508799CM.K1242Cameroongenomic DNAp24 sequence22315I,6F,14S,15L,27I,71D,83L,87Q,92P,96I,116T,124V,148V,169F,178T,187D,208G,225S
AJ55508199CM.K1244Cameroongenomic DNAp24 sequence12296A,14X,15V,54M,58I,71D,83I,87Q,91V,92P,120S,124V,131R,148V,154K,169F,180D,183G,200S,203R,207A,208G,229E
AJ55507399CM.K1265Cameroongenomic DNAp24 sequence12306A,10W,11T,14N,27I,54V,58I,71D,83I,120S,128D,148V,169F,178T,187D,200S,208G,221M
AJ55506899CM.K1268Cameroongenomic DNAp24 sequence12306A,14T,15M,27I,54M,58I,71D,83L,92P,110N,120S,128D,148V,169F,178T,188S,200S,207T,208G,225S,230S
AJ55508299CM.K1273Cameroongenomic DNAp24 sequence22316A,14P,54M,58I,71D,86A,87Q,96I,98D,110N,116A,120G,131R,148V,154K,169F,171A,178T,183G,187D,191I,203R,204G,207Q,208G,210S
AJ55509299CM.K1274Cameroongenomic DNAp24 sequence12306A,9H,14P,15L,31G,33N,54M,58I,71D,78V,83M,91N,92P,120S,148V,169F,171V,178T,200S,207S,208G,229K,230S
AJ55500799CM.K1282Cameroongenomic DNAp24 sequence12306A,11T,14S,41T,54M,58I,71D,116A,120S,128D,148V,169F,178T,180D,200S,203R,208G
AJ55506499CM.K1285Cameroongenomic DNAp24 sequence12306A,11A,12Y,14S,15M,27I,31G,41T,54M,58I,71D,92P,115T,120S,135V,148V,169F,178T,200S,208G
AJ55504799CM.K1290Cameroongenomic DNAp24 sequence12316A,11T,15L,31G,33N,54M,58I,71D,83I,92P,110N,120S,128D,148V,169F,178T,187D,200S,207T,208G
AJ55505299CM.K1291Cameroongenomic DNAp24 sequence12316F,27I,36I,79D,83M,116A,124V,148V,225S
AJ55507599CM.K1292Cameroongenomic DNAp24 sequence12316A,14S,15M,27I,54M,58I,71D,79D,83A,92P,120S,135V,148V,169F,178T,190M,200S,203R,208G,225S
AJ55508999CM.K1295Cameroongenomic DNAp24 sequence82299K,10L,71D,83L,86P,87Q,92P,96I,115V,116T,120S,148V,169F,171A,180D,187D,207I,208G,225X
AJ55508399CM.K1299Cameroongenomic DNAp24 sequence12296M,14V,15L,27I,50V,83L,87Q,91V,120S,148V,178T,208G,210S
AJ55504999CM.K1300Cameroongenomic DNAp24 sequence22312K,6L,27I,41T,83L,87Q,91V,120S,143K,148V,178T,208G,216S,225X
AJ55508099CM.K1304Cameroongenomic DNAp24 sequence12312K,6A,54M,58I,71D,83I,91A,92P,120G,124V,131R,148V,154K,169F,178T,183G,187D,191I,200S,203R,208G,225S
AJ55505099CM.K1305Cameroongenomic DNAp24 sequence12316A,14T,15L,27I,54M,58I,71D,83L,92P,111P,120S,128D,148V,154K,169F,178T,180D,200A,203R,207T,208G
AJ55501099CM.K1311Cameroongenomic DNAp24 sequence12316A,11T,26A,27I,41T,54M,58I,71D,75D,92P,120S,135V,148V,169F,178T,203R,208G
AJ55506399CM.K1326Cameroongenomic DNAp24 sequence22316X,11T,14N,27I,54M,58I,71D,83I,115V,120S,128D,148V,169F,178T,200A,207T,208G,225S
AJ55507999CM.K2029Cameroongenomic DNAp24 sequence22316A,11T,14S,15M,27I,41T,45D,54M,58I,71D,83T,91V,112H,115V,116T,120S,132K,148V,169F,178T,200S,203R,208G,225X
AJ55506299CM.K2035Cameroongenomic DNAp24 sequence12312K,6A,10W,11T,14S,15M,27I,54M,58I,71D,120S,148V,169F,178T,200S,203R,204G,208G,226HLPR
AJ55500899CM.MP1378Cameroongenomic DNAp24 sequence12316A,11T,14S,15M,27I,54M,58I,71D,83L,92P,120G,123A,128D,148V,154K,169F,171A,178T,180D,187D,200Q,207T,208G
AJ55500999CM.MP1380Cameroongenomic DNAp24 sequence12316L,15L,27I,71D,83L,87Q,92P,96I,116A,120S,124V,148V,169F,178T,187D,208G,225S
AJ55501199CM.MP1392Cameroongenomic DNAp24 sequence12296X,13N,14P,15L,26A,31N,33N,36I,41T,54M,58I,59I,71D,87Q,92P,96L,107S,110N,115V,120S,148V,169F,178T,180P,200A,203R,207T,208G,225S
AJ55501299CM.MP1416Cameroongenomic DNAp24 sequence12306A,71D,83L,86R,87P,91L,92P,96L,100S,102G,116R,120S,148V,169F,178T,183G,187D,203R,208G,225S
AJ55501399CM.MP1418Cameroongenomic DNAp24 sequence12296A,11T,14S,26A,27I,41T,54M,58I,71D,83T,92P,120S,135V,148V,169F,178T,200S,203R,208G,217S,225S

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