<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Buranapraditkun (2011) Viral Escape from a Novel Immunodominant HLA-Cw*0102-Restricted Gag Epitope in HIV-1 Clade A/E Infection PLoS One. 2011;6(8):e23603. 7.87e-161 100 100 Naive Plasma Direct PCR HLA

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AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
HM6276545001_Gag_dbThailand27-Aug-2004genomic DNA12316A,14S,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
HM6276555002_Gag_dbThailand10-Sep-2004genomic DNA12316A,14S,31G,33N,54M,58I,79D,87Q,92P,96I,116T,128D,178T,200S,203R,207T,208G,225S
HM6276565003_Gag_dbThailand10-Sep-2004genomic DNA12316A,14P,15V,31G,33N,54M,58I,86I,87Q,91F,92P,96L,120S,128D,178T,200S,207T,208G,225S
HM6276575004_Gag_dbThailand10-Sep-2004genomic DNA12316A,14P,15L,31G,33N,54M,58I,78V,83T,92P,128D,148V,178T,200S,207S,208G,225S
HM6276585005_Gag_dbThailand10-Sep-2004genomic DNA12316A,14P,15L,31G,33N,54M,58I,78V,83T,92P,94R,128D,148V,178T,200S,207S,208G,225S
HM6276595006_Gag_dbThailand11-Sep-2004genomic DNA12316A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
HM6276605008_Gag_dbThailand16-Sep-2004genomic DNA12316A,14P,15L,31G,33N,54M,58I,83I,92P,120G,123S,128D,148V,178T,200S,207T,208G,225S
HM6276615011_Gag_dbThailand20-Sep-2004genomic DNA12316T,14P,15L,31G,33N,54M,58I,92P,110N,128D,148V,178T,200S,207T,208G,225S
HM6276625016_Gag_dbThailand08-Dec-2004genomic DNA12316A,14S,15L,31G,33N,54M,58I,83I,92P,110N,120S,128D,148V,178T,200S,207T,208G,225S,229K
HM6276635017_Gag_dbThailand08-Dec-2004genomic DNA12316A,10W,15V,16T,31G,33N,54M,58I,83L,110N,120S,128D,148V,178T,183H,200S,207T,208G,225S
HM6276645018_Gag_dbThailand08-Dec-2004genomic DNA12316A,14P,15L,31G,33N,54M,58I,68I,79D,83L,92P,110N,120S,128D,148V,178T,183H,200S,207T,208G,225S
HM6276655019_Gag_dbThailand08-Dec-2004genomic DNA12316A,14S,15L,31G,33N,54M,58I,83I,92P,120S,128D,148V,178T,200S,207T,208G,225S
HM6276665020_Gag_dbThailand08-Dec-2004genomic DNA12316A,14S,15L,31G,33N,54M,58I,87Q,92P,110N,120S,128D,148V,149G,178T,183A,200S,207T,208G,225S
HM6276675021_Gag_dbThailand17-Dec-2004genomic DNA12316T,14P,15L,31G,33N,54M,58I,83L,92P,128D,148V,178T,200S,207T,208G,225S
HM6276685022_Gag_dbThailand17-Dec-2004genomic DNA12316A,14P,15L,31G,33N,54M,58I,92P,128D,148V,165I,178T,200A,204S,207T,208G,210S,225S
HM6276695023_Gag_dbThailand22-Dec-2004genomic DNA12316A,14P,15L,31G,33N,54M,58I,83I,92P,120G,123A,128D,148V,149G,200S,207T,208G,225S
HM6276705024_Gag_dbThailand22-Dec-2004genomic DNA12316A,14P,15V,31G,33N,54M,58I,83I,92P,120S,121T,128D,148V,178T,200S,203R,207T,208G,225S
HM6276715026_Gag_dbThailand28-Dec-2004genomic DNA12316A,14S,15L,31G,33N,54M,58I,92P,110N,120S,128D,160S,200S,207T,208G,225S
HM6276725027_Gag_dbThailand11-Jan-2005genomic DNA12316A,14P,15L,27I,31G,33N,54M,58I,71D,79D,83T,92P,128D,148V,169F,178T,200S,207T,208G,225S
HM6276735028_Gag_dbThailand11-Jan-2005genomic DNA12316A,14P,15L,31G,33N,54M,58I,92P,120G,123A,128D,148V,178T,200S,207T,208G,225S
HM6276745029_Gag_dbThailand11-Jan-2005genomic DNA12316A,14P,31G,33N,54M,58I,92P,128D,148V,178T,204S,207T,208G,225S
HM6276755030_Gag_dbThailand11-Jan-2005genomic DNA12316A,14P,15V,31G,33N,54M,58I,79D,83T,92P,128D,148V,178T,200S,207T,208G,225S
HM6276765034_Gag_dbThailand13-Jan-2005genomic DNA12316A,14P,15L,31G,33N,54M,58I,87Q,91F,92P,96L,110N,116A,120H,128D,148V,154K,178T,200S,208G,225S
HM6276775035_Gag_dbThailand18-Jan-2005genomic DNA12316A,14P,15V,31G,33N,54M,58I,87Q,92P,96L,110N,128D,148V,149G,200S,207T,208G,210S,225S
HM6276785036_Gag_dbThailand18-Jan-2005genomic DNA12314H,6A,10A,15V,31G,33N,54M,58I,92P,128D,146K,148V,154K,163E,171I,178T,200A,207T,208G,225S
HM6276795038_Gag_dbThailand24-Jan-2005genomic DNA12316A,14P,15V,31G,33N,54M,58I,83T,92P,120S,128D,148V,178T,200A,207T,208G,225S
HM6276805039_Gag_dbThailand25-Jan-2005genomic DNA12316A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
HM6276815040_Gag_dbThailand25-Jan-2005genomic DNA12316A,14P,15V,31G,33N,54M,58I,71D,92P,120S,128D,148V,149G,154K,178T,200S,207T,208G,225S
HM6276825042_Gag_dbThailand25-Jan-2005genomic DNA12316A,14P,15V,31G,33N,54M,58I,92P,120S,128D,178T,200S,207T,208G,225S
HM6276835047_Gag_dbThailand01-Mar-2005genomic DNA12316A,14P,15L,31G,33N,54M,58I,87Q,92P,96L,120G,123S,128D,148V,200S,207T,208G,225S
HM6276845048_Gag_dbThailand01-Mar-2005genomic DNA12316A,14P,15L,31G,33N,54M,58I,83I,87Q,91F,92P,96L,98D,116R,128D,148V,178T,200S,207T,208G,210S,225S
HM6276855061_Gag_dbThailand20-Sep-2005genomic DNA12316A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
HM6276865072_Gag_dbThailand22-Dec-2005genomic DNA12316A,14P,15L,31G,33N,54M,58I,92P,96I,110N,120G,123A,148V,178T,200S,207T,208G,225S
HM6276875073_Gag_dbThailand29-Dec-2005genomic DNA12316A,14P,15L,31G,33N,54M,58I,79D,83A,92P,128D,148V,178T,200S,207T,208G,225S
HM6276885074_Gag_dbThailand05-Jan-2006genomic DNA12316A,14S,15L,31G,33N,54M,58I,83L,92P,120S,128D,148V,178T,200S,207T,208G,225S
HM6276895075_Gag_dbThailand10-Jan-2006genomic DNA12316A,11I,14P,15V,31G,33N,54M,58I,92P,124V,128D,148V,178T,200S,207T,208G,225S
HM6276905079_Gag_dbThailand04-Apr-2006genomic DNA12316A,31G,33N,54M,58I,87Q,92P,96I,120G,123S,148V,154K,178T,200S,203R,208G,225S
HM6276915081_Gag_dbThailand11-Apr-2006genomic DNA12316A,14P,15L,31G,33N,54M,58I,83L,92P,128D,148V,178T,200S,207T,208G,225S
HM6276925082_Gag_dbThailand11-Apr-2006genomic DNA12316A,11I,14P,15L,27I,31G,33N,54M,58I,64G,92P,111I,120G,128D,178T,200S,207T,208G,225S
HM6276935083_Gag_dbThailand24-Apr-2006genomic DNA12316A,14P,31G,33N,54M,58I,92P,128D,178T,200S,207T,208G,225S
HM6276945085_Gag_dbThailand01-May-2006genomic DNA12316A,14P,15L,27I,31G,33N,45D,54M,58I,64G,83L,92P,120G,123S,128D,148V,154K,178T,200S,207T,208G,225S
HM6276955086_Gag_dbThailand09-May-2006genomic DNA12316A,31G,33N,54M,58I,87Q,92P,96I,98D,116A,128D,148V,178T,200S,207T,208G,225S
HM6276965090_Gag_dbThailand25-May-2006genomic DNA12316A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
HM6276975092_Gag_dbThailand29-May-2006genomic DNA12316A,11A,14P,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
HM6276985094_Gag_dbThailand21-Jun-2006genomic DNA12316A,14P,15L,31G,33N,54M,58I,92P,120S,123S,128D,148V,178T,200S,207T,208G,225S
HM6276995095_Gag_dbThailand26-Jun-2006genomic DNA12316A,11M,14P,15L,31G,33N,41T,54M,58I,61D,62Q,68I,87Q,91V,146K,148V,149G,178T,191I,200S,207T,208G,225S
HM6277005096_Gag_dbThailand26-Jun-2006genomic DNA12316A,14P,15V,31G,33N,54M,58I,59I,87Q,91F,92P,128D,148V,149G,178T,200S,207T,208G,225S
HM6277015097_Gag_dbThailand27-Jun-2006genomic DNA12316A,14S,15L,31G,33N,54M,58I,83L,92P,120S,128D,148V,178T,200S,207T,208G,225S
HM6277025098_Gag_dbThailand28-Jun-2006genomic DNA12316A,14S,15L,31G,33N,54M,58I,92P,110N,120S,128D,148V,149G,200S,207T,208G,225S
HM6277035099_Gag_dbThailand03-Jul-2006genomic DNA12316A,11T,14P,15V,27I,30R,31G,33N,36I,58I,83L,87Q,92P,96L,146K,148V,154K,178T,191I,200A,207T,208G,225S
HM6277535102_Gag_dbThailand05-Jul-2006genomic DNA12316A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
HM6277525103_Gag_dbThailand05-Jul-2006genomic DNA12316A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
HM6277515106_Gag_dbThailand07-Jul-2006genomic DNA12316A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
HM6277505107_Gag_dbThailand12-Jul-2006genomic DNA12316A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
HM6277495108_Gag_dbThailand15-Jul-2006genomic DNA12316T,14P,15L,27I,31G,33N,54M,58I,71D,79D,83L,92P,120G,123S,128D,148V,154K,178T,200S,207T,208G,225S
HM6277485110_Gag_dbThailand13-Jul-2006genomic DNA12316A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
HM6277475114_Gag_dbThailand15-Sep-2006genomic DNA12316T,14P,15L,31G,33N,54M,58I,92P,110N,128D,148V,178T,200S,207T,208G,225S
HM6277465115_Gag_dbThailand14-Sep-2006genomic DNA12316A,14P,15L,31G,33N,41T,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
HM6277455116_Gag_dbThailand27-Sep-2006genomic DNA12316A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,210S,225S
HM6277445118_Gag_dbThailand28-Sep-2006genomic DNA12316V,14S,15V,31G,33N,54M,58I,83I,92P,120S,124V,128D,148V,149G,200S,207T,208G,225S
HM6277435119_Gag_dbThailand28-Sep-2006genomic DNA12316A,14S,15L,31G,33N,54M,58I,92P,110N,120S,128D,148V,154K,178T,200S,207T,208G,225S
HM6277425122_Gag_dbThailand09-Oct-2006genomic DNA12316A,14P,15L,31G,33N,54M,58I,92P,128D,148V,149G,200S,207T,208G,230I
HM6277415123_Gag_dbThailand09-Oct-2006genomic DNA12316A,14P,15L,31G,33N,54M,58I,83L,92P,128D,148V,178T,200S,207T,208G,225S
HM6277405124_Gag_dbThailand11-Oct-2006genomic DNA12316A,14P,15V,31G,33N,54M,58I,79D,83L,87Q,92P,96I,110N,116A,120S,128D,148V,178T,200S,207T,208G,210S,225S
HM6277395125_Gag_dbThailand12-Oct-2006genomic DNA12316A,11A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
HM6277385126_Gag_dbThailand12-Oct-2006genomic DNA12316A,14P,15L,31G,33N,54M,58I,83I,87Q,92P,96L,120G,123S,128D,148V,178T,200S,207T,208G,225S
HM6277375127_Gag_dbThailand17-Oct-2006genomic DNA12316A,11I,14P,15L,31G,33N,54M,58I,92P,111I,120S,128D,178T,191I,200S,203R,207T,208G,225S
HM6277365129_Gag_dbThailand30-Oct-2006genomic DNA12316A,14P,15V,31G,33N,54M,58I,83T,92P,120S,128D,148V,149G,178T,199R,200S,203R,207T,208G,225S
HM6277355130_Gag_dbThailand16-Nov-2006genomic DNA12316A,11T,14P,15L,31G,33N,54M,58I,61D,83L,92P,113D,128D,146R,148V,154K,178T,200A,207T,208G,225S
HM6277345131_Gag_dbThailand16-Nov-2006genomic DNA12316A,14P,15L,31G,33N,54M,58I,83I,92P,110N,128D,148V,178T,200S,207T,208G,225S
HM6277335132_Gag_dbThailand22-Nov-2006genomic DNA12316A,14P,15L,31G,33N,41T,58I,83L,92P,146R,148V,154K,178T,200A,207T,208G,225S
HM6277325133_Gag_dbThailand28-Nov-2006genomic DNA12316A,14S,15L,27I,31G,33N,54M,58I,83L,92P,128D,148V,178T,200S,207T,208G,225S
HM6277315134_Gag_dbThailand14-Dec-2006genomic DNA12316A,11I,14P,15L,31G,33N,54M,58I,83L,86A,91V,92Q,98D,128D,148V,154K,162K,178T,200S,207T,208G,225S
HM6277305135_Gag_dbThailand19-Dec-2006genomic DNA12316A,14P,31G,33N,54M,58I,59I,83L,92P,128D,148V,149G,178T,200S,207T,208G,225S
HM6277295137_Gag_dbThailand08-Jan-2007genomic DNA12316T,15L,31G,33N,54M,58I,92P,111I,128D,148V,178T,200S,203R,204S,207A,208G,210S,225S
HM6277285138_Gag_dbThailand10-Jan-2007genomic DNA12316A,11T,14P,15L,31G,33N,54M,58I,92P,111I,128D,148V,178T,200S,203R,204G,207T,208G,225S
HM6277275145_Gag_dbThailand14-Feb-2007genomic DNA12316A,14P,15L,31G,33N,54M,58I,83L,92P,128D,148V,178T,200S,207T,208G,225S
HM6277265147_Gag_dbThailand15-Feb-2007genomic DNA12316A,14P,15L,31G,33N,54M,58I,83L,92P,128D,148I,178T,200S,207T,208G,225S
HM6277255148_Gag_dbThailand15-Feb-2007genomic DNA12316A,14S,15L,31G,33N,54M,58I,92P,110N,120G,123A,128D,148V,178T,200S,207T,208G,225S
HM6277245154_Gag_dbThailand22-Feb-2007genomic DNA12316A,14P,15V,31G,33N,54M,58I,92P,120S,123A,128D,148V,178T,200S,207T,208G,225S
HM6277235156_Gag_dbThailand22-Feb-2007genomic DNA12316A,14P,15L,31G,33N,54M,58I,83L,92P,112P,120S,128D,148V,178T,200S,207T,208G,225S
HM6277225157_Gag_dbThailand28-Feb-2007genomic DNA12316A,15V,31G,33N,54M,58I,83I,87Q,92P,96I,116T,128D,148V,178T,200S,207T,208G,225S
HM6277215158_Gag_dbThailand28-Feb-2007genomic DNA12316A,15V,31G,33N,54M,58I,83I,96I,116A,128D,148V,154K,178T,200S,207T,208G,225S
HM6277205160_Gag_dbThailand01-Mar-2007genomic DNA12316T,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,208G,225S
HM6277195162_Gag_dbThailand07-Mar-2007genomic DNA12316A,14S,15L,31G,33N,47S,54M,58I,92P,120S,128D,148V,163E,178T,200S,207T,208G,225S
HM6277185163_Gag_dbThailand07-Mar-2007genomic DNA12316A,11T,14S,15L,27I,31G,33N,54M,58I,86A,87Q,91F,92P,96L,98D,128D,148V,162K,178T,200S,207T,208G,216L,225S
HM6277175164_Gag_dbThailand15-Mar-2007genomic DNA12316A,11T,15L,31G,33N,54M,58I,71D,92P,128D,148V,149G,178T,200S,207T,208G,225S
HM6277165165_Gag_dbThailand15-Mar-2007genomic DNA12316A,11S,14S,15L,31G,33N,54M,58I,86A,87Q,91F,92P,120S,128D,148V,178T,183G,200S,207T,208G,225S
HM6277155166_Gag_dbThailand29-Mar-2007genomic DNA12316A,9H,14P,15L,31G,33N,54M,58I,83I,87Q,91F,92P,96I,110N,116A,120H,128D,148V,200S,207T,208G,225S
HM6277145167_Gag_dbThailand02-Apr-2007genomic DNA12316A,14S,15L,31G,33N,54M,58I,92P,110N,120S,128D,148V,178T,200S,207T,208G,225S
HM6277135168_Gag_dbThailand10-Apr-2007genomic DNA12316A,14S,15L,31G,33N,54M,58I,92P,115V,120S,128D,131R,143K,146C,148V,154K,178T,200S,207T,208G,225S
HM6277125169_Gag_dbThailand10-Apr-2007genomic DNA12316A,14P,15L,31G,33N,54M,58I,83L,92P,128D,148V,149G,154K,178T,183A,200S,207T,208G,225S
HM6277115171_Gag_dbThailand18-Apr-2007genomic DNA12316A,14P,15V,31G,33N,54M,58I,92P,120G,123A,128D,148V,178T,191I,200S,207T,208G,225S
HM6277105172_Gag_dbThailand18-Apr-2007genomic DNA12316A,14S,15L,31G,33N,54M,58I,83L,92P,120S,123A,128D,148V,178T,200S,207T,208G,225S
HM6277095173_Gag_dbThailand18-Apr-2007genomic DNA12316A,14P,15L,31G,33N,54M,58I,83L,92P,128D,148V,178T,200S,207T,208G,210S,225S
HM6277085175_Gag_dbThailand19-Apr-2007genomic DNA12316A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
HM6277075177_Gag_dbThailand01-May-2007genomic DNA12316A,14P,15V,31G,33N,54M,58I,91V,92P,120S,128D,148V,178T,200A,207T,208G,225S
HM6277065178_Gag_dbThailand08-May-2007genomic DNA12316A,14P,15L,27I,31G,33N,54M,58I,71D,79D,83L,91A,92P,120S,128D,148V,169F,178T,199R,200S,207M,208G,225S
HM6277055180_Gag_dbThailand09-May-2007genomic DNA12316A,11T,14P,15L,31G,33N,48A,54M,58I,83I,92P,120S,148V,178T,200A,207T,208G,225S
HM6277045181_Gag_dbThailand16-May-2007genomic DNA12316V,14S,15V,31G,33N,54M,58I,92P,120S,124V,128D,148V,149G,200S,207T,208G,225S

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