<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Tongo Passo (2012) Direct Submission Submitted (23-JUN-2012) Medical Virology, Universi 3.8e-164 48 48 Naive Plasma Direct PCR Molecular epidemiology

Download sequences

AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
JX244899BS01Cameroon2006genomic RNAsubtype: CRFA1,01_AE,G12316A,11T,15V,27I,41T,54V,58I,71D,83T,92P,111I,120S,124V,135V,148V,169F,178T,203R,208G
JX244900BS02Cameroon2006genomic RNAsubtype: A112316A,14S,15L,27I,31S,41T,54M,58I,71D,83G,86P,92Q,96L,110N,120S,148V,160T,169F,178T,187D,200A,203R,208G
JX244901BS03Cameroon2006genomic RNAsubtype: G12316A,14P,41T,71D,83M,86P,87Q,96I,98D,100T,110N,116R,120S,148V,169F,178T,180D,187D,203R,208G
JX244902BS04Cameroon2007genomic RNAsubtype: G12316A,71D,83M,86Q,87Q,92P,96I,116R,120S,148V,169F,178T,187D,203R,208G,225S
JX244903BS05Cameroon2007genomic RNAsubtype: CRFA1,01_AE,G12316A,11I,14S,15M,27I,54M,58I,71D,83I,96I,120S,148V,169F,171A,178T,183G,200S,207T,208G
JX244904BS06Cameroon2007genomic RNAsubtype: CRF01_AE,A112316A,15M,27I,41T,48A,54M,58I,71D,83T,92P,96I,120G,148V,169F,177G,178T,200S,203R,208G,225S
JX244905BS09Cameroon2007genomic RNAsubtype: CRFA1,01_AE,G12316V,27I,33N,54M,58I,71D,120S,148V,169F,171A,178T,183G,187D,207T,208G
JX244906BS10Cameroon2007genomic RNAsubtype: A112316A,11I,14S,15L,27I,50G,58V,75D,83L,92P,96L,111P,120G,128D,131R,148V,154K,169F,171V,178T,191I,203R,207T,208G,211I
JX244907BS11Cameroon2007genomic RNAsubtype: A1,G12316A,11T,14P,15M,27I,41T,54M,58I,71D,92P,111I,120S,135V,148V,154K,169F,178T,180D,187D,200N,203R,208G
JX244908BS12Cameroon2007genomic RNAsubtype: G12316A,15L,30R,71D,79D,83Q,86R,87Q,88V,92P,96I,98D,100S,116R,120S,148V,169F,180D,183G,187D,203R,208G
JX244909BS13Cameroon2007genomic RNAsubtype: CRFA1,01_AE,C12316A,14S,27I,54K,55K,58I,71D,83I,87Q,92P,120S,135V,148V,169F,178T,180D,203R,208G
JX244910BS14Cameroon2007genomic RNAsubtype: CRF01_AE,A112316A,11T,14S,15L,27I,54M,58I,71D,83T,92P,110N,120S,148V,169F,178T,200S,207T,208G,224X
JX244911BS16Cameroon2007genomic RNAsubtype: CRFA1,01_AE12316A,11T,14N,15M,27I,31G,54V,58I,71D,87Q,92P,110N,115V,120S,148V,169F,178T,204G,207T,208G,225S
JX244912BS19Cameroon2007genomic RNAsubtype: CRF01_AE,A112316A,11I,14N,15L,27I,31G,54M,58I,71D,92P,115M,116N,120S,124V,128D,148V,154K,169F,178T,200S,207T,208G
JX244913BS21Cameroon2007genomic RNAsubtype: CRF01_AE,A112316A,14P,15M,16L,27I,54M,58I,71D,83L,92P,120S,128D,129L,148V,169F,200S,203R,208G,222E
JX244914BS22Cameroon2007genomic RNAsubtype: CRFA1,01_AE12316A,11T,14S,15M,27I,54M,58I,71D,83M,91V,96L,110N,120S,148V,169F,178T,199R,200S,207T,208G
JX244915BS23Cameroon2007genomic RNAsubtype: CRF01_AE12316A,11I,14P,15M,27I,31G,33N,50T,54M,58I,71D,83L,86I,91N,92P,115V,120S,128D,148V,169F,178T,200A,203R,207T,208G
JX244916BS24Cameroon2007genomic RNAsubtype: CRF01_AE,A112316A,10L,11T,14T,15M,41T,54M,58I,71D,91N,92P,120S,128D,148V,169F,178T,200S,203R,204G,207S,208G
JX244917BS25Cameroon2007genomic RNAsubtype: A1,G12316A,14S,15M,27I,45D,54M,58I,71D,83I,91V,120S,124H,126S,128R,148V,169F,178T,187D,200S,208G
JX244918BS26Cameroon2007genomic RNAsubtype: CRF01_AE12316A,27I,31G,33N,54M,58I,71D,92P,120G,123A,128D,148V,169F,178T,200S,207T,208G,225S
JX244919BS27Cameroon2007genomic RNAsubtype: CRF01_AE,A112316A,11T,15L,41T,54M,58I,71D,92P,120S,121T,148V,169F,171A,178T,180D,199R,200S,207T,208G,225S
JX244920BS29Cameroon2007genomic RNAsubtype: A1,G12316A,10H,27I,41T,50F,52I,54M,58V,71D,83G,91V,96L,119A,120S,132K,148V,169F,178T,180D,203R
JX244921BS30Cameroon2007genomic RNAsubtype: D12316L,15L,27I,33N,83L,91A,96L,120S,148V,178T,208G,225S
JX244922BS32Cameroon2007genomic RNAsubtype: A112316A,11T,14S,27I,54M,58I,71D,79D,92Q,120S,148V,169F,178T,200S,207T,208G
JX244923BS38Cameroon2007genomic RNAsubtype: CRFA1,01_AE12316A,14S,27I,54M,58I,71D,83L,92P,120G,123A,124V,128D,148V,169F,180D,183G,207T,208G
JX244924BS39Cameroon2007genomic RNAsubtype: CRFA1,01_AE12316A,11I,12Y,14S,15M,41T,54M,58I,71D,83T,87Q,91F,92P,111P,116A,120S,130I,135V,163E,169F,178T,180D,200A,203R,208G,225S
JX244925BS40Cameroon2007genomic RNAsubtype: CRF01_AE12316A,31G,33N,54M,58I,71D,79D,83T,91H,92P,96I,116A,120H,148V,169F,178T,183G,200S,207T,208G
JX244927BS43Cameroon2007genomic RNAsubtype: CRFA1,01_AE,D,G12316A,11I,15V,31G,33N,54M,58I,71D,83I,120S,148V,169F,178T,183G,200S,207T,208G
JX244928BS45Cameroon2007genomic RNAsubtype: CRFA1,01_AE,G12316A,16T,27I,54M,58I,67H,71D,83T,87Q,92P,96I,115M,120S,148V,169F,171A,172F,173E,174S,178T,183G,207T,208G
JX244929BS46Cameroon2007genomic RNAsubtype: G12316V,15L,27I,31G,33N,41T,71D,75D,83L,86Q,87Q,91F,92P,116A,120S,136W,148V,154K,169F,178T,180D,187D,203R,207A,208G
JX244930BS47Cameroon2007genomic RNAsubtype: CRF01_AE,A112316T,11T,12Y,14S,15M,27I,41T,54M,58I,71D,83T,86A,87Q,91F,92P,93A,96I,98D,120S,135V,148V,169F,171A,178T,180D,187D,200S,208G,225S
JX244931BS48Cameroon2007genomic RNAsubtype: G12316A,9H,15L,27I,41T,71D,83L,86Q,87Q,92P,96I,110N,116T,120S,146C,148V,154K,169F,177S,187D,207T,208G,230I
JX244932BS49Cameroon2007genomic RNAsubtype: F212316L,31G,33N,71D,75D,79D,83L,96L,116A,124V,148V,154K,169F,178T,183G,187D,207S,208G,210S,225S,230I
JX244933BS50Cameroon2007genomic RNAsubtype: CRF01_AE,A112316A,11I,14N,15L,27I,31G,54M,58I,71D,92P,111P,115M,116A,120S,124V,128D,148V,169F,171V,178T,200S,201L,207R,208G
JX244934BS51Cameroon2007genomic RNAsubtype: G12316S,14P,15L,41T,71D,83M,86P,87Q,96I,110S,116T,120S,148V,154K,169F,178T,180D,187D,203R,208G
JX244935BS53Cameroon2007genomic RNAsubtype: CRFA1,01_AE,G12316A,11T,15M,27I,54M,58I,71D,83I,92P,120S,148V,169F,178T,180D,207T,208G
JX244936BS54Cameroon2007genomic RNAsubtype: D,B12316L,15L,27I,41T,50S,83L,87Q,91V,120S,148V,180D,208G
JX244937BS55Cameroon2007genomic RNAsubtype: CRF01_AE,A112316A,11I,14N,15M,27I,41T,54M,58I,71D,83L,91V,116A,120S,128D,148V,169F,178T,200S,203R,208G
JX244938BS56Cameroon2007genomic RNAsubtype: CRFA1,01_AE,G12316A,14S,15L,26A,27I,54M,58I,71D,79D,83T,92P,120S,148V,169F,180D,203R,208G
JX244939BS57Cameroon2007genomic RNAsubtype: CRF01_AE,A1,G12316A,54M,58I,71D,72A,83T,92P,107S,120G,132K,136M,140R,154K,169F,171A,178T,180D,191T,200S,203R,208G,225S
JX244940BS64Cameroon2007genomic RNAsubtype: CRFA1,01_AE12316A,11T,14N,15M,27I,54M,58I,71D,83T,110N,115V,116A,120G,128D,148V,169F,178T,200S,207T,208G,230I
JX244942BS66Cameroon2007genomic RNAsubtype: CRFA1,01_AE12316A,11T,14S,15M,27I,41T,54M,58I,71D,83T,92P,98D,120S,124V,135V,148V,154K,169F,178T,180D,200S,203R,208G
JX244943BS71Cameroon2007genomic RNAsubtype: CRF01_AE,A1,G12316A,11T,14S,15L,41T,54M,58I,71D,83I,120S,148V,169F,178T,200S,203R,208G,210S
JX244944BS72Cameroon2007genomic RNAsubtype: CRF01_AE,F212316A,15V,31G,33N,54M,58I,71D,83I,91N,92P,120S,148V,154K,169F,178T,187D,200S,207T,208G
JX244945BS73Cameroon2007genomic RNAsubtype: CRF01_AE,A112316A,14T,15M,27I,54M,58I,71D,83T,92P,110N,120S,128D,148V,169F,178T,199R,200S,208G
JX244946BS75Cameroon2007genomic RNAsubtype: CRFA1,01_AE12316A,11T,27I,54M,58I,71D,83I,92P,110N,120S,128D,148V,169F,178T,208G,225S
JX244947BS77Cameroon2007genomic RNAsubtype: CRF01_AE,A112316A,11T,14N,15M,27I,54M,58I,71D,83L,115V,128D,148V,169F,178T,200S,207T,208G
JX244948BS81Cameroon2007genomic RNAsubtype: CRF01_AE,A112316A,11T,27I,54M,58I,71D,83T,87Q,92P,96I,98D,148V,169F,178T,203R,208G,225S

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