Genbank References: capsid (p24)

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Genbank References: capsid (p24)

Authors	Title	Citation	E-value	# in Gb	#Pts	ART	Source	Cloning	StudyType
Edwards (2016)	Population genetic estimation of the loss of genetic diversity during horizontal transmission of HIV-1	BMC Evol. Biol. 6, 28 (2006)	9.65e-170	103	2	Naive	Plasma	Molecular clones	Acute infection

Download sequences

Accession	IsolateName	Country	MolType	FirstAA	LastAA	MutList
DQ316519	P32p24J01_085	United Kingdom: Lond	genomic RNA	4	231	71K,83L,92T,136I,148I,172P,178T,199R
DQ316520	P32p24J02_085	United Kingdom: Lond	genomic RNA	4	231	83L,136I,178T,194S
DQ316521	P32p24J03_085	United Kingdom: Lond	genomic RNA	4	231	6M,68V,83L,136I,148I,178T,199R
DQ316522	P32p24J04_085	United Kingdom: Lond	genomic RNA	4	231	83L,136I,178T,194S
DQ316523	P32p24J05_085	United Kingdom: Lond	genomic RNA	4	231	83L,102N,136I,178T,194S
DQ316524	P32p24J06_085	United Kingdom: Lond	genomic RNA	4	231	6M,83L,136I,148I,178T,199R
DQ316525	P32p24J07_085	United Kingdom: Lond	genomic RNA	4	231	83L,136I,163G,178T,194S
DQ316526	P32p24J08_085	United Kingdom: Lond	genomic RNA	4	231	83L,96V,136M,162K,174G,178T,194S
DQ316527	P32p24J09_085	United Kingdom: Lond	genomic RNA	4	231	83L,136I,178T,194S,195Y
DQ316528	P32p24J10_085	United Kingdom: Lond	genomic RNA	4	231	83L,136I,162S,178T,194S
DQ316529	P32p24J12_085	United Kingdom: Lond	genomic RNA	4	231	83L,136M,178T,183S,194S
DQ316530	P32p24J13_085	United Kingdom: Lond	genomic RNA	4	231	83L,136I,178T,194S
DQ316531	P32p24J14_085	United Kingdom: Lond	genomic RNA	4	231	67R,83L,136I,148I,178T
DQ316532	P32p24J15_085	United Kingdom: Lond	genomic RNA	4	231	83L,136I,178T
DQ316533	P32p24J16_085	United Kingdom: Lond	genomic RNA	4	231	83L,136I,178T,194S
DQ316534	P32p24J17_085	United Kingdom: Lond	genomic RNA	4	231	83L,136I,178T,194S
DQ316535	P32p24J19_085	United Kingdom: Lond	genomic RNA	4	231	83L,91V,136I,178T,194S,210A
DQ316536	P32p24J20_085	United Kingdom: Lond	genomic RNA	4	231	83L,136M,178T,194S
DQ316537	P32p24J21_085	United Kingdom: Lond	genomic RNA	4	231	23R,83L,136I,178T,194S
DQ316499	P32p24M01_000	United Kingdom: Lond	genomic RNA	4	231	83L,136I,148I,178T,200N
DQ316500	P32p24M02_000	United Kingdom: Lond	genomic RNA	4	231	6M,47V,83L,136I,148I,178T
DQ316501	P32p24M03_000	United Kingdom: Lond	genomic RNA	4	231	83L,105V,136I,148I,178A,199R
DQ316502	P32p24M04_000	United Kingdom: Lond	genomic RNA	4	231	83L,136I,178T,194S
DQ316503	P32p24M05_000	United Kingdom: Lond	genomic RNA	4	231	6M,66T,73T,83L,136I,148I,178T
DQ316504	P32p24M06_000	United Kingdom: Lond	genomic RNA	4	231	83L,136I,148I,178T,200N
DQ316505	P32p24M07_000	United Kingdom: Lond	genomic RNA	4	231	83L,136I,178T,194S
DQ316506	P32p24M08_000	United Kingdom: Lond	genomic RNA	4	231	83L,115M,136I,178T,194S
DQ316507	P32p24M09_000	United Kingdom: Lond	genomic RNA	4	231	39T,83L,136I,178T
DQ316508	P32p24M10_000	United Kingdom: Lond	genomic RNA	4	231	83L,136I,148I,178T,199R,219R
DQ316509	P32p24M11_000	United Kingdom: Lond	genomic RNA	4	231	83L,105V,136I,148I,178A,199R
DQ316510	P32p24M12_000	United Kingdom: Lond	genomic RNA	4	231	83L,136I,148I,178T,191G
DQ316511	P32p24M13_000	United Kingdom: Lond	genomic RNA	4	231	83L,136I,178T,194S
DQ316512	P32p24M14_000	United Kingdom: Lond	genomic RNA	4	231	83L,136I,178T,194S
DQ316513	P32p24M15_000	United Kingdom: Lond	genomic RNA	4	231	83L,136I,178T,194S
DQ316514	P32p24M16_000	United Kingdom: Lond	genomic RNA	4	231	6M,83L,136I,150V,178T
DQ316515	P32p24M17_000	United Kingdom: Lond	genomic RNA	4	231	6M,22T,83L,136I,148I,178T,200N
DQ316516	P32p24M18_000	United Kingdom: Lond	genomic RNA	4	231	6M,83L,136I,148I,178T,200N
DQ316517	P32p24M19_000	United Kingdom: Lond	genomic RNA	4	231	83L,136I,148I,178T,200N
DQ316518	P32p24M20_000	United Kingdom: Lond	genomic RNA	4	231	83L,136I,178T,194S
DQ316541	S32p24A04_166	United Kingdom: Lond	genomic RNA	4	231	6M,83L,136I,148I,178T
DQ316542	S32p24A05_166	United Kingdom: Lond	genomic RNA	4	231	6M,83L,136I,148I,178T
DQ316543	S32p24A08_166	United Kingdom: Lond	genomic RNA	4	231	6M,83L,98G,136I,148I,162S,178T
DQ316544	S32p24A11_166	United Kingdom: Lond	genomic RNA	4	231	6M,83L,134V,136I,148I,178T
DQ316545	S32p24A12_166	United Kingdom: Lond	genomic RNA	4	231	6M,83L,136I,148I,178T,200A
DQ316546	S32p24A13_166	United Kingdom: Lond	genomic RNA	4	231	6M,36I,83L,136I,141M,148I,178T
DQ316547	S32p24A14_166	United Kingdom: Lond	genomic RNA	4	231	6M,23R,83L,136I,148I,178T
DQ316548	S32p24A15_166	United Kingdom: Lond	genomic RNA	4	231	6M,83L,136I,148I,178T
DQ316549	S32p24A17_166	United Kingdom: Lond	genomic RNA	4	231	6M,83L,91V,136I,148I,178T
DQ316550	S32p24A18_166	United Kingdom: Lond	genomic RNA	4	231	6M,83L,136I,148I,170E,178T
DQ316538	S32p24AI01_155	United Kingdom: Lond	genomic RNA	4	231	6M,83L,136I,148I,178T
DQ316539	S32p24AI03_155	United Kingdom: Lond	genomic RNA	4	231	6M,83L,136I,148I,178T
DQ316540	S32p24AI11_155	United Kingdom: Lond	genomic RNA	4	231	6M,13P,83L,136I,148I,178T
DQ316568	S32p24AP01_392	United Kingdom: Lond	genomic RNA	4	231	6M,83L,112R,136I,148I,178T,199R
DQ316569	S32p24AP02_392	United Kingdom: Lond	genomic RNA	4	231	6M,83L,91V,136I,148I,178T,199R
DQ316570	S32p24AP03_392	United Kingdom: Lond	genomic RNA	4	231	6M,83L,136I,148I,178T,199R
DQ316571	S32p24AP04_392	United Kingdom: Lond	genomic RNA	4	231	6M,79G,83L,136I,148I,178T,199R
DQ316572	S32p24AP05_392	United Kingdom: Lond	genomic RNA	4	231	6M,83L,136I,148I,178T,199R
DQ316573	S32p24AP06_392	United Kingdom: Lond	genomic RNA	4	231	6M,83L,136I,148I,178T,199R
DQ316574	S32p24AP07_392	United Kingdom: Lond	genomic RNA	4	231	6M,83L,136I,148I,178T,199R
DQ316575	S32p24AP08_392	United Kingdom: Lond	genomic RNA	4	231	6M,83L,136I,148I,178T,199R
DQ316576	S32p24AP09_392	United Kingdom: Lond	genomic RNA	4	231	6M,83L,136I,148I,157S,178A,199R
DQ316577	S32p24AP10_392	United Kingdom: Lond	genomic RNA	4	231	6M,83L,136I,148I,178T,199R
DQ316578	S32p24AP11_392	United Kingdom: Lond	genomic RNA	4	231	6M,83L,136I,148I,178T,199R
DQ316590	S32p24AP12_392	United Kingdom: Lond	genomic RNA	4	231	6M,83L,136I,148I,178T,199R
DQ316591	S32p24AP13_392	United Kingdom: Lond	genomic RNA	4	231	6M,83L,136I,148I,178T,199R
DQ316592	S32p24AP14_392	United Kingdom: Lond	genomic RNA	4	231	6M,83L,136I,148I,178T,199R
DQ316593	S32p24AP15_392	United Kingdom: Lond	genomic RNA	4	231	6M,83L,136I,148I,178T,199R
DQ316594	S32p24AP16_392	United Kingdom: Lond	genomic RNA	4	231	6M,83L,136I,148I,178T,199R
DQ316595	S32p24AP17_392	United Kingdom: Lond	genomic RNA	4	231	6M,55V,83L,136I,148I,178T,199R
DQ316596	S32p24AP18_392	United Kingdom: Lond	genomic RNA	4	231	6M,83L,136I,148I,178T,199R
DQ316597	S32p24AP19_392	United Kingdom: Lond	genomic RNA	4	231	6M,83L,132G,136I,148I,178T,199R
DQ316598	S32p24AP20_392	United Kingdom: Lond	genomic RNA	4	231	6M,83L,136I,148I,178T,199R,208V
DQ316599	S32p24AP21_392	United Kingdom: Lond	genomic RNA	4	231	6M,75G,83L,136I,148I,178T,199R
DQ316600	S32p24AP22_392	United Kingdom: Lond	genomic RNA	4	231	6M,83L,136I,148I,178T,199R
DQ316601	S32p24AP23_392	United Kingdom: Lond	genomic RNA	4	231	6M,83L,136I,148I,178T,199R
DQ316551	S32p24O01_214	United Kingdom: Lond	genomic RNA	8	231	83L,136I,148I,178T
DQ316552	S32p24O02_214	United Kingdom: Lond	genomic RNA	8	231	83L,136I,148I,178T,200N
DQ316553	S32p24O03_214	United Kingdom: Lond	genomic RNA	4	231	6M,83L,136I,148I,178T
DQ316554	S32p24O04_214	United Kingdom: Lond	genomic RNA	4	231	6M,83L,125L,136I,148I,178T,195D
DQ316555	S32p24O05_214	United Kingdom: Lond	genomic RNA	4	231	6M,83L,136I,148I,178T
DQ316556	S32p24O06_214	United Kingdom: Lond	genomic RNA	4	231	6M,83L,125L,136I,148I,178T
DQ316557	S32p24O07_214	United Kingdom: Lond	genomic RNA	4	231	6M,83L,136I,148I,178T
DQ316558	S32p24O08_214	United Kingdom: Lond	genomic RNA	4	231	6M,83L,136I,148I,178T,200N
DQ316559	S32p24O09_214	United Kingdom: Lond	genomic RNA	4	231	6M,83L,136I,148I,178T
DQ316560	S32p24O13_214	United Kingdom: Lond	genomic RNA	4	231	6M,83L,136I,148I,178T
DQ316561	S32p24O15_214	United Kingdom: Lond	genomic RNA	4	231	6M,83L,136I,148I,178T
DQ316562	S32p24O16_214	United Kingdom: Lond	genomic RNA	4	231	6M,33G,83L,136I,148I,178T
DQ316563	S32p24O18_214	United Kingdom: Lond	genomic RNA	4	231	6M,72A,83L,103G,136I,148I,178T
DQ316564	S32p24O19_214	United Kingdom: Lond	genomic RNA	4	231	6M,83L,136I,148I,178T
DQ316565	S32p24O20_214	United Kingdom: Lond	genomic RNA	4	231	6M,83L,136I,148I,178T
DQ316566	S32p24O22_214	United Kingdom: Lond	genomic RNA	7	231	83L,136I,148I,178T,200N
DQ316567	S32p24O24_214	United Kingdom: Lond	genomic RNA	4	231	6M,42G,83L,136I,148I,178T
DQ316579	S32p24O25_214	United Kingdom: Lond	genomic RNA	4	231	6M,83L,136I,148I,178T,199R
DQ316580	S32p24O26_214	United Kingdom: Lond	genomic RNA	4	231	6M,37M,83L,136I,148I,178T,200N
DQ316581	S32p24O27_214	United Kingdom: Lond	genomic RNA	4	231	6M,83L,136I,148I,178T
DQ316582	S32p24O28_214	United Kingdom: Lond	genomic RNA	4	231	6M,83L,136I,148I,178T
DQ316583	S32p24O29_214	United Kingdom: Lond	genomic RNA	4	231	6M,83L,136I,148I,178T,200N
DQ316584	S32p24O30_214	United Kingdom: Lond	genomic RNA	4	231	6M,83L,100G,136I,148I,178T
DQ316585	S32p24O31_214	United Kingdom: Lond	genomic RNA	4	231	6M,83L,136I,148I,178T,200N
DQ316586	S32p24O32_214	United Kingdom: Lond	genomic RNA	4	231	6M,83L,136I,148I,178T,199R
DQ316587	S32p24O33_214	United Kingdom: Lond	genomic RNA	4	231	6M,7R,37M,83L,136I,148I,178T
DQ316588	S32p24O34_214	United Kingdom: Lond	genomic RNA	4	231	6M,40L,83L,136I,148I,178T
DQ316589	S32p24O35_214	United Kingdom: Lond	genomic RNA	4	231	6M,83L,98G,136I,148I,178T

Genbank References: capsid (p24)

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