<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Watanaveeradej (2016) Molecular epidemiology of HIV Type 1 in preparation for a Phase III prime-boost vaccine trial in Thailand and a new approach to HIV Type 1 genotyping AIDS Res. Hum. Retroviruses 22 (8), 801-807 (2006) 9.26e-153 27 26 Naive PBMC Direct PCR Molecular epidemiology

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AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
AY94571400TH.C1468HYPThailandgenomic DNAisolated in 2000;subtype: CRF01_AE12316A,10I,14P,15L,23*,31G,33N,54M,58I,60R,61R,80*,82K,92P,106R,117*,128D,133*,148I,156R,178T,184*,200S,206R,207T,208G,229K
AY94571500TH.C1705HYPThailandgenomic DNAisolated in 2000;subtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,75K,80*,82K,92P,97K,120G,123S,128D,133*,137R,148V,178T,184*,200S,207T,208G,225S
AY94571600TH.C2101Thailandgenomic DNAisolated in 2000;subtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,92P,110N,128D,148V,178T,200S,207T,208G,225S
AY94573300TH.C2254_BEThailandgenomic DNAisolated in 2000;subtype: CRF01_AE/B12316A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
AY94571700TH.C2257Thailandgenomic DNAisolated in 2000;subtype: CRF01_AE12316A,14P,15V,31G,33N,54M,58I,79D,92P,120S,128D,148V,178T,200S,207T,208G,225S
AY94571000TH.C3198Thailandgenomic DNAisolated in 2000;subtype: B123114P,41T,83L,120S,123A,180D,203R
AY94572100TH.C3347Thailandgenomic DNAisolated in 2000;subtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,87P,92P,96L,128D,148V,149G,178T,200S,207T,208G,210S,225S
AY94572200TH.C4118Thailandgenomic DNAisolated in 2000;subtype: CRF01_AE12316A,14P,15V,31G,33N,47T,54M,58I,61D,83L,92P,120S,128D,144I,146K,148V,154K,178T,200S,201L,208G,210S
AY94572300TH.C4141HYPThailandgenomic DNAisolated in 2000;subtype: CRF01_AE12316A,10I,14S,15L,23*,31G,33N,54M,58I,60R,61R,80*,83T,87Q,92P,96I,97K,106R,115V,116A,128D,148V,149G,156R,162K,184*,200S,207T,208G,225S,229K
AY94572400TH.C4151Thailandgenomic DNAisolated in 2000;subtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,92P,110N,128D,148V,178T,200S,207T,208G,225S
AY94572500TH.C4382Thailandgenomic DNAisolated in 2000;subtype: CRF01_AE12316A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G
AY94572900TH.R1496HYPThailandgenomic DNAisolated in 2000;subtype: CRF01_AE12316A,8R,14P,27I,31G,33N,58V,71K,76K,83L,89E,92P,96I,97K,101R,103N,110N,116E,117*,120G,123A,128N,133*,137E,148V,159K,163N,166N,184*,185I,187D,197N,200S,206E,207T,208G,211I,212K,213K,214I,223E,225S
AY94573400TH.R1741Thailandgenomic DNAisolated in 2000;subtype: CRF01_AE/B12312L,4R,6V,14P,15L,31G,33N,54M,58I,83I,92P,96L,128D,148V,149G,200S,207T,208G,225S
AY94571301TH.C1436Thailandgenomic DNAisolated in 2001;subtype: CRF01_AE12316A,14P,15V,31G,33N,54M,58I,83T,92P,128D,148V,149G,163E,178T,200S,207T,208G,225S
AY94571901TH.C2570Thailandgenomic DNAisolated in 2001;subtype: CRF01_AE12316A,11I,14P,15L,31G,33N,54M,58I,92P,107S,111I,120S,128D,178T,200S,203R,207S,208G,225S
AY94572001TH.C3256Thailandgenomic DNAisolated in 2001;subtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
AY94573001TH.R2184Thailandgenomic DNAisolated in 2001;subtype: CRF01_AE12316A,14P,31G,33N,54M,58I,92P,128D,148V,178T,200S,207A,225S
AY94572898TH.R1166Thailandgenomic DNAisolated in 1998;subtype: CRF01_AE12316A,14P,15V,31G,33N,54M,58I,92P,120S,123S,128D,148V,178T,200A,207S,208G,225S
AY94571299TH.C1080Thailandgenomic DNAisolated in 1999;subtype: CRF01_AE12316S,14P,15L,31G,33N,54M,58I,92P,120S,148V,178T,200S,207T,208G,225S
AY94571199TH.C1416Thailandgenomic DNAisolated in 1999;subtype: B12316L,14P,83L,91V,180D,225S,230I
AY94573599TH.C2266HYPThailandgenomic DNAisolated in 1999; hypermutated;subtype: CRF01_AE/C12316L,14P,23*,27I,41T,60K,71D,80*,83L,91V,96I,100K,110S,116A,117*,120S,124V,128D,133*,137R,148V,154K,156R,167Q,169F,173K,178T,180D,184*,187D,203R,206R,210S,216A,222R,223R,225S,229K
AY94571899TH.C2405Thailandgenomic DNAisolated in 1999;subtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
AY94572699TH.C4460Thailandgenomic DNAisolated in 1999;subtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,92P,112A,120S,128D,148V,178T,200S,207T,208G,225S
AY94572799TH.R1149Thailandgenomic DNAisolated in 1999;subtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,61E,92P,96I,146R,148V,154K,178T,200S,207A,208G,225S
AY94573199TH.R3006Thailandgenomic DNAisolated in 1999;subtype: CRF01_AE12316A,14P,15V,31G,33N,54M,58I,128D,148V,178T,200A,207S,208G,210S,225S
AY94573299TH.R3265Thailandgenomic DNAisolated in 1999;subtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
DQ789392C1705Thailand2000genomic DNAnon-hypermutated strain;subtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,92P,120G,123S,128D,148V,178T,200S,207T,208G,225S

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