<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Brockman (2010) Early Selection in Gag by Protective HLA Alleles Contributes to Reduced HIV-1 Replication Capacity That May Be Largely Compensated for in Chronic Infection J. Virol. 84 (22), 11937-11949 (2010) 6.09e-170 66 66 Naive Plasma Direct PCR HLA

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AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
GU390464AC_GAG1Germany2005genomic DNAindividual in acute/early HIV-1infection123114P,41A,83L,120H,132K,136I,154K
GU390473AC_GAG10Germany2004genomic DNAindividual in acute/early HIV-1infection12316L,14S,44A,71D,83L,115V,120S,180D,210S
GU390474AC_GAG11Germany2005genomic DNAindividual in acute/early HIV-1infection12316L,41A,116A,132K,136M
GU390475AC_GAG12Germany2003genomic DNAindividual in acute/early HIV-1infection12316L,14P,41T,83L,91A,120S,123A,180D,199R
GU390476AC_GAG13Germany2003genomic DNAindividual in acute/early HIV-1infection12316L,15M,27I,41A,83L,116A,120S,124T
GU390477AC_GAG14Germany2003genomic DNAindividual in acute/early HIV-1infection12316L,27I,78G,83L,116A,148V
GU390478AC_GAG15Germany2003genomic DNAindividual in acute/early HIV-1infection12316M,11I,27I,41T,50H,91V,132K,136M,178T,183T,194S
GU390479AC_GAG16Germany2003genomic DNAindividual in acute/early HIV-1infection12316M,41A,83L,116AG,132K,136M,149N,177C,180D,194AS
GU390480AC_GAG17Germany2003genomic DNAindividual in acute/early HIV-1infection123114P,83L,87Q,91V,107S,120S,154K
GU390481AC_GAG18Australia2004genomic DNAindividual in acute/early HIV-1infection12316L,91V
GU390482AC_GAG19USA2005genomic DNAindividual in acute/early HIV-1infection12316L,83L,154K,171I,177C,180D
GU390465AC_GAG2Germany2004genomic DNAindividual in acute/early HIV-1infection12316L,83L
GU390483AC_GAG20USA2004genomic DNAindividual in acute/early HIV-1infection12316L,11AV,14P,83L,91V,116A,128D,154K,171V,209AV
GU390484AC_GAG21USA2003genomic DNAindividual in acute/early HIV-1infection12316M,14P,27I,50G,83L,87Q,91V,96I,116A,128D,154K,209C,225S
GU390485AC_GAG22USA2003genomic DNAindividual in acute/early HIV-1infection12316L,83L,154K,178T
GU390486AC_GAG23USA2004genomic DNAindividual in acute/early HIV-1infection12316L,14T,15L,27I,36I,41T,83L,86P,87Q,91V,96I,98D,110N,116A,148V,208G,210S
GU390487AC_GAG24USA2005genomic DNAindividual in acute/early HIV-1infection12316M,27I,41T,75D,83L,86T,87Q,120S,124V,225S,230I
GU390488AC_GAG25USA2002genomic DNAindividual in acute/early HIV-1infection12316L,41T,83L,86P,87Q,110N,116A,120S,123A,124V,154K,170R,180D,203R,229K,230I
GU390489AC_GAG26USA2004genomic DNAindividual in acute/early HIV-1infection12316L,27I,83L,96I,116T,148V,180D
GU390490AC_GAG27USA2003genomic DNAindividual in acute/early HIV-1infection123114P,68I,79D,83L,87Q,91V,120S,136M,148V,149G,180D
GU390491AC_GAG28USA2004genomic DNAindividual in acute/early HIV-1infection123127I,41T,83L,91V,112A,116A,120S,128D,136M,148V,154K,178T,208G,210N
GU390492AC_GAG29USA2004genomic DNAindividual in acute/early HIV-1infection12316L,83L,194S
GU390466AC_GAG3Germany2004genomic DNAindividual in acute/early HIV-1infection12316L,15L,27I,31N,44A,83L,91IV,116A,123AP,148V,180D
GU390493AC_GAG30USA2003genomic DNAindividual in acute/early HIV-1infection12316L,83L,91V,116EG,136M,154K,178T
GU390494AC_GAG31USA2004genomic DNAindividual in acute/early HIV-1infection12316L,27I,83L,91V,98D,120G,123A,148V,178T,216S,225S
GU390495AC_GAG32USA2003genomic DNAindividual in acute/early HIV-1infection12316L,83L,154K,178T
GU390496AC_GAG33USA2003genomic DNAindividual in acute/early HIV-1infection12316L,15L,83L,93PS,120H,154K,170R,194S
GU390497AC_GAG34USA2005genomic DNAindividual in acute/early HIV-1infection12316L,14P,31S,58S,83I,91V,110N,116N,120S,180D,225S
GU390498AC_GAG35USA2003genomic DNAindividual in acute/early HIV-1infection12316M,15M,27I,41A,83M,91L,92P,110N,120S,148S,154K,194S,225S
GU390499AC_GAG36USA2000genomic DNAindividual in acute/early HIV-1infection12316L,27I,41T,83L,87Q,91V,96L,116A,120H,124V,148V,200N
GU390500AC_GAG37USA2001genomic DNAindividual in acute/early HIV-1infection12316F,15L,44A,83L,87Q,91V,116D,120H,136M,148V,180D
GU390501AC_GAG38USA2001genomic DNAindividual in acute/early HIV-1infection12316L,14P,41T,83L,91V,120G,135V,136M,178T,208G,216S
GU390502AC_GAG39USA2002genomic DNAindividual in acute/early HIV-1infection12316L,83L,91V,154K,171V
GU390467AC_GAG4Germany2004genomic DNAindividual in acute/early HIV-1infection12316L,83L,91V,180D
GU390503AC_GAG40USA2004genomic DNAindividual in acute/early HIV-1infection12316L,83L,86Q,87Q,96I,116T,139HN,148S,154K,178T,225A
GU390504AC_GAG41USA2004genomic DNAindividual in acute/early HIV-1infection12316L,10H,27I,71D,79D,83L,136I,148V,180D,225S,230I
GU390505AC_GAG42USA2005genomic DNAindividual in acute/early HIV-1infection12316L,15L,27I,41T,83L,86AV,87Q,96I,116A,148V,154KR,180DE,210S
GU390506AC_GAG43Australia2005genomic DNAindividual in acute/early HIV-1infection12316L,15L,27I,41T,83L,91V,110N,116A,120S,148V,154K,180D,207T,208G,225S
GU390507AC_GAG44Germany2004genomic DNAindividual in acute/early HIV-1infection12316L,15L,27I,33N,83L,96I,116T,148V
GU390508AC_GAG45Germany2006genomic DNAindividual in acute/early HIV-1infection12316L,15L,83L,91V,116A,148AITV,180D
GU390509AC_GAG46Germany2005genomic DNAindividual in acute/early HIV-1infection12316L,15L,27I,75D,83L,91A,116N,120G,194S
GU390510AC_GAG47Germany2005genomic DNAindividual in acute/early HIV-1infection12316L,15L,31S,41A,59I,68I,83L,91V,132K,136M,216A
GU390511AC_GAG48Germany2005genomic DNAindividual in acute/early HIV-1infection12314R,6L,83L,116AG,128D,132G,225S
GU390512AC_GAG49Germany2004genomic DNAindividual in acute/early HIV-1infection12316L,14S,15L,27I,83L,148V,154K,178T
GU390468AC_GAG5Germany2004genomic DNAindividual in acute/early HIV-1infection12316L,14P,17A,91V,148V,180D
GU390513AC_GAG50Germany2005genomic DNAindividual in acute/early HIV-1infection12316L,15L,27I,41T,83L,87Q,91V,96I,116A,120H,124V,148V,180D
GU390514AC_GAG51Germany2005genomic DNAindividual in acute/early HIV-1infection12316L,11I,83L,86P,87Q,91L,92P,96L,116T,120S,126I,148I,178T
GU390515AC_GAG52Germany2005genomic DNAindividual in acute/early HIV-1infection123114P,15L,27I,83L,87Q,91V,98D,110N,116A,120H,148V,230I
GU390516AC_GAG53Germany2005genomic DNAindividual in acute/early HIV-1infection123114P,41T,83L,86P,87Q,91A,96I,98D,116A,120S,124V,154K,180D
GU390517AC_GAG54USA2003genomic DNAindividual in acute/early HIV-1infection12313I,4R,6M,12Y,14G,83L,116D,120H,154K,171V,210S,216S
GU390518AC_GAG55USA2003genomic DNAindividual in acute/early HIV-1infection123114P,27I,83L,86P,87Q,96I,116T,148V,178ST
GU390519AC_GAG56USA2005genomic DNAindividual in acute/early HIV-1infection12316L,14P,41A,83M,91V,120S,123A,132K,136M,154K,160S,171V,180D
GU390520AC_GAG57USA2005genomic DNAindividual in acute/early HIV-1infection12316L,44A,83L,87HQ,91IV,136LM,154K,178T
GU390521AC_GAG58USA2005genomic DNAindividual in acute/early HIV-1infection123141A,54L,91V,96I,116A,125Q,154K,170R,194S
GU390522AC_GAG59USA2002genomic DNAindividual in acute/early HIV-1infection12316M,83L,87Q,96I,116A,136M
GU390469AC_GAG6Germany2004genomic DNAindividual in acute/early HIV-1infection12316L,83L,86P,87Q,91Y,92P,96L,116T,154K,177S,208S,210S,225S,230I
GU390523AC_GAG60USA2004genomic DNAindividual in acute/early HIV-1infection12316L,14P,83L,91V,96L,116A,128D,154K,171V,180D,225S,229K
GU390524AC_GAG61USA2004genomic DNAindividual in acute/early HIV-1infection123115L,83L,91V,136M,148V,180D
GU390525AC_GAG62USA2005genomic DNAindividual in acute/early HIV-1infection12316L,213D,225S,230I
GU390526AC_GAG63USA2005genomic DNAindividual in acute/early HIV-1infection12316L,14P,83L,180D
GU390527AC_GAG64USA2006genomic DNAindividual in acute/early HIV-1infection12316V,10P,15L,83L,87Q,91V,96L,116A,120H,136I,143K,148I
GU390528AC_GAG65USA2006genomic DNAindividual in acute/early HIV-1infection12316L,83L,178T
GU390529AC_GAG66USA2004genomic DNAindividual in acute/early HIV-1infection12316L,15M,16T,27I,83L,96L,116A,120H,148S,154K,194S,208G,225S
GU390470AC_GAG7Germany2004genomic DNAindividual in acute/early HIV-1infection12316L,15L,83L,116A,148V,180D
GU390471AC_GAG8Germany2004genomic DNAindividual in acute/early HIV-1infection12316L,83L,91V,180D
GU390472AC_GAG9Germany2005genomic DNAindividual in acute/early HIV-1infection123183M,87A,91V,96L,98D,110S,116A,120H,124V,154K,183H

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