<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Wang (2016) Protective HLA class I alleles that restrict acute-phase CD8+ T-cell responses are associated with viral escape mutations located in highly conserved regions of human immunodeficiency virus type 1 J. Virol. 83 (4), 1845-1855 (2009) 3.64e-156 91 98 Naive PBMC Direct PCR HLA

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AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
FJ46968201144GUSA07-Aug-2005genomic DNAgenotype: B12316L,41T,83L,91N,92P,154K
FJ469683012286GUSA11-May-2005genomic DNAgenotype: B12316L,91V,191I,208G
FJ469684014837GUSA03-Dec-2004genomic DNAgenotype: B12316L,15L,68I,83L,132K,136M,148V,208G
FJ4696851229IUSAgenomic DNAgenotype: B12316L,14P,83L,180D,225S
FJ469686AT01480USA06-May-2003genomic DNAgenotype: B12316L,27I,83L,87Q,91N,92P,116A,148V,178T
FJ469687CR0017QUSA31-Aug-2002genomic DNAgenotype: B12316L,27I,83L,91N,107S,120S,225S
FJ469688CR0023WUSA29-Aug-2002genomic DNAgenotype: B123187Q,96I,116T,225S
FJ469689CR0027MUSA15-Jul-2007genomic DNAgenotype: B12316M,27I,41T,91V,115V,120S,148V,194S,208G,225S
FJ469690CR0036WUSAgenomic DNAgenotype: B123127I,50S,83M,91V,120S,128D,148V,154K,180D
FJ469691CR0047UUSA19-Dec-2006genomic DNAgenotype: B12316M,27I,28K,36I,79D,148V,208G
FJ469692CR0050ZUSAgenomic DNAgenotype: B12316L,14P,83L,180D,225S
FJ469693CR0058SUSA06-Dec-2002genomic DNAgenotype: B12316M,14P,15L,27I,120H,148I,178T
FJ469694CR0059TUSAgenomic DNAgenotype: B12316L,14P,15L,79D,83L,91V,96L,107S,120S,136M
FJ469695CR0068PUSA28-Jan-2004genomic DNAgenotype: B12316M,14P,16T,83L,225S
FJ469696CR0078USA27-Sep-2006genomic DNAgenotype: B123183L,116A,128D,136M,148V,180D
FJ469697CR0080NUSA25-Aug-2004genomic DNAgenotype: B12316L,180D,225S
FJ469698CR0116YUSA04-Nov-2004genomic DNAgenotype: B12316L,83L,225S
FJ469699CR0127WUSAgenomic DNAgenotype: B123114P,83L,194S,225S,229K,230I,231M
FJ469700CR0131USA16-Oct-2006genomic DNAgenotype: B12314R,6L,14P,16T,83M,116D,120H
FJ469701CR0154XUSA12-Apr-2003genomic DNAgenotype: B12316M,71D,83L,100K,120H,121I,154K,170R,180D
FJ469702CR0164UUSAgenomic DNAgenotype: B12316L,14S,15L,27I,83L,148V,178T
FJ469703CR0175SUSA21-Jun-2005genomic DNAgenotype: B12316L
FJ469704CR0192WUSAgenomic DNAgenotype: B12316L,14P,41T,135V
FJ469705CR0206UUSAgenomic DNAgenotype: B12316M,41V,83L,91N,92P,132K,136I,225S
FJ469706CR0208WUSA28-Feb-2005genomic DNAgenotype: B12316L,14P,41T,83L,116A,121T,128D,148S,154K,180D,225S
FJ469707CR0214USA03-Aug-2007genomic DNAgenotype: B12316L,27I,50G,83L,87Q,96I,116T,120S,128D,177C,178T,199R
FJ469708CR0215USA25-Jul-2006genomic DNAgenotype: B12312V,6M,14P,27I,36I,71D,79D,83L,87Q,91V,116A,148V,170R,180D,194S,208G
FJ469709CR0222XUSA27-May-2006genomic DNAgenotype: B12316L,83L,120H,128D,132K,154K,208G
FJ469710CR0228QUSA18-Sep-2006genomic DNAgenotype: B12316L,115V,120S
FJ469711CR0234USAgenomic DNAgenotype: B123183L,194S,225S,230I
FJ469712CR0248XUSAgenomic DNAgenotype: B12316M,15L,41T,83L,116A,123A,154K,194S,208G
FJ469713CR0275USA07-Sep-2007genomic DNAgenotype: B12316M,41A,54L,83L,91V,116A,120S,125Q,154K,170R,194S,225S
FJ469714CR0276ZUSA25-Sep-2006genomic DNAgenotype: B12316L,14P,44A,83L,120H,160S
FJ469715CR0289ZUSAgenomic DNAgenotype: B12316L,14P,15L,27I,41T,83L,91V,148V,180D,207Q,208G,216S,225S,230I
FJ469716CR0295SUSA18-Apr-2007genomic DNAgenotype: B12316L,10H,83L,116A,199R,200N
FJ469717CR0307RUSA20-Jun-2005genomic DNAgenotype: B12316L,41A,68I,83L,91V,116A,120S,129V,132K,136I,148V,180D,216A
FJ469718CR0312WUSA13-Jul-2005genomic DNAgenotype: B12313I,6L,41T,50H,83L,91V,132K,136M,148V,163E,180D,191I,208G,216S,225S
FJ469719CR0317NUSAgenomic DNAgenotype: B12316M,50S,83L,87Q,91V,96I,116A,120H,128D,154K,171V
FJ469720CR0331PUSAgenomic DNAgenotype: B12316L,41T,83L,91N,92P,120S,134V,154K,199R
FJ469721CR0339XUSA18-Apr-2007genomic DNAgenotype: B12316A,33N,41A,68I,83L,120H,132K,136M,143K,148I
FJ469722CR0345QUSA08-Jul-2004genomic DNAgenotype: B12316M,41A,83L,120H,138I,208G
FJ469723CR0361TUSA08-Sep-2006genomic DNAgenotype: B12316L,27I,83L,148V
FJ469724CR0367ZUSA21-Jul-2005genomic DNAgenotype: B12316L,83L,91N,92P,154K
FJ469725CR0382NUSAgenomic DNAgenotype: B12316A,16T,120H,148V,154K,180D
FJ469726CR0413TUSAgenomic DNAgenotype: B12316L,83L
FJ469727F701USAgenomic DNAgenotype: B12316L,41A,83L,120S,125Q,178T
FJ469728F706USA30-Jan-2002genomic DNAgenotype: B123183L,154K
FJ469729F710USAgenomic DNAgenotype: B12316M,83L,120H
FJ469730F714USA12-Feb-2002genomic DNAgenotype: B12316L,14P,170R,180D
FJ469731F7157USA19-Nov-2003genomic DNAgenotype: B12316L,27I,41T,83M,91A,116A,120G,124V,194S,208G
FJ469732F7165USA08-Apr-2004genomic DNAgenotype: B12316V,14P,15L,30R,41T,59I,83L,110N,116A,200H,225S
FJ469733F7172USA07-Jan-2004genomic DNAgenotype: B12316L,14P,15L,27I,41T,83L,91V,148V,180D,210S,225S,230I
FJ469734F719USA20-Feb-2002genomic DNAgenotype: B12316L,14P,15L,31N,41T,59I,83L,110N,180D,208G,210S
FJ469735F762PUSA21-May-2002genomic DNAgenotype: B12316L,14S,83L,87Q,91V,96I,98D,116T,148I,180D,199R
FJ469736F781USA16-Apr-2003genomic DNAgenotype: B12316L,83L,120H,132G,208G
FJ469737F797USA28-Aug-2002genomic DNAgenotype: B12312V,6L,27I,50G,83L,87Q,91V,120S,148V,208G,225S
FJ469738L805USA01-Nov-2001genomic DNAgenotype: B12316M,41T,83L,87Q,91V,98D,120S,154K,201L,208G
FJ469739L8107USA21-Mar-2003genomic DNAgenotype: B123115L,83L,87Q,91V,120H,148A,154K,225S
FJ469740L8116USA14-Aug-2003genomic DNAgenotype: B12316L,27I,41T,83L,120S,124V,132T,148V,191I,194S,208G,213D
FJ469741L8124PUSA01-Aug-2002genomic DNAgenotype: B12316M,14P,44A,83L,96I,110N,116A,120H,154K,170R
FJ469742L8152USA24-Jan-2003genomic DNAgenotype: B12316V,83L,120H,136M,194S,208G,210S,225S,230I
FJ469743L8180USA19-Nov-2003genomic DNAgenotype: B12316L,14P,16T,31S,59I,83L,118I,120H,148V,180D
FJ469744L8188USAgenomic DNAgenotype: B12316L,83M,91V,115V,120S,208G,225S
FJ469745L819USA27-Aug-2004genomic DNAgenotype: B12316M,15L,27I,41T,91V,148V,178T,180D,208G,210S
FJ469746L8249USA28-Oct-2005genomic DNAgenotype: B12316L,27I,83L,148V
FJ469747L827USA23-Sep-2005genomic DNAgenotype: B12316L,14P,83L,178T
FJ469748L861PUSA14-Feb-2002genomic DNAgenotype: B12316M,83L
FJ469749L893PUSA25-Sep-2002genomic DNAgenotype: B12316M,27I,41V,83A,91V,120Q,125Q,148V,208G
FJ469750L896USAgenomic DNAgenotype: B12316L,14P,15L,41T,83L,110N,120H,154K,225A
FJ469751MTFUSA22-May-2002genomic DNAgenotype: B12316L,41T,79D,83T,84Q,115V,116A,120S,154K,178T,225S
FJ469752NCQUSAgenomic DNAgenotype: B12316L,83L,86Q,87Q,96I,116T,139H,148S,154K,178T,225A
FJ469753PRLS01USA12-Apr-2003genomic DNAgenotype: B12316L,27I,35K,83L,91A,120S,148V,180D,230I
FJ469754PRLS02USA06-Jun-2002genomic DNAgenotype: B12316L,14P,15L,31N,41T,59I,83L,110N,180D,208G,210S
FJ469755PRLS04USA30-Jan-2003genomic DNAgenotype: B12316L,15L,83L,86A,87Q,91V,92Q,96I,98D,116A,120H,148S,154K,194S,208G,225S
FJ469756PRLS05USAgenomic DNAgenotype: B12316L,47G,83L,86A,87Q,91V,98D,120S,180D
FJ469757PRLS08USA25-Jul-2002genomic DNAgenotype: B123114S,15L,83L,91V,136M,154K,178T,194S
FJ469758PRLS09USA26-Jul-2002genomic DNAgenotype: B12316L,83L,154K
FJ469759PRLS12USA30-Jul-2003genomic DNAgenotype: B12316L,15L,41T,83L,87Q,96I,110N,116A,154K,208G
FJ469760PRLS16USA26-Sep-2002genomic DNAgenotype: B12316M,83L,87Q,91V,98D,120S,154K,183H,208G
FJ469761PRLS17USAgenomic DNAgenotype: B12316L,41A,83L,120S,124T
FJ469762PRLS18USA12-Oct-2002genomic DNAgenotype: B12316L,27I,41T,83L,120S,124V,132T,148V,191I,194S,208G,213D
FJ469763PRLS19USAgenomic DNAgenotype: B123114P,44A,87Q,96I,110N,116A
FJ469764PRLS24USA28-Mar-2003genomic DNAgenotype: B12316L,14P,15L,27I,33N,41A,83L,132K,136M,148V,178T,225S
FJ469765PRLS25USA23-May-2003genomic DNAgenotype: B12316L,83L,178T
FJ469766PRLS28USAgenomic DNAgenotype: B12316L,14P,15L,79D,83L
FJ469767SH8127USAgenomic DNAgenotype: B12316L,27I,83L,120H,128D,132K,154K,208G
FJ469768SH8183USAgenomic DNAgenotype: B12316L,83L,154K,225S
FJ469769SH8229USAgenomic DNAgenotype: B12316L,41A,83L,120S,123A,124V,136M,141V,154K,194S,225S,229K,230I
FJ469770SH8233USA05-Dec-2003genomic DNAgenotype: B12316L,27I,83L,148V,149C,180D,194S
FJ469771SH8241USAgenomic DNAgenotype: B12316M,11I,27I,50H,58A,83L,91V,120S,129V,132K,136M,154K,178T
FJ469772SH858USA02-Jun-2004genomic DNAgenotype: B12316M,27I,36I,83L,87Q,91V,148V,160S,180D,208G,225S

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