<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Xia (2016) HIV Prevalence and Phylogenetic Characteristics among Entry Travelers in Xishuangbanna Prefecture, Yunnan Province, between 2003 and 2012 J Med Virol. 2015 Sep;87(9):1500-9. 1.46e-160 81 161 Naive Plasma Direct PCR Molecular epidemiology

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AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
KU87145303023China2003genomic DNAplasmagenotype: CRF07_BC12316L,14P,68I,71D,83L,116A,120G,124V,128D,154K,169F,178T,180D,187D,203R,208G,210S,211I,225S
KU87140803025China2003genomic RNAplasmagenotype: CRF01_AE12315G,6A,14S,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
KU87147103026China2003genomic DNAplasmagenotype: 070812316L,14S,15L,68I,71D,79D,83L,116A,120A,124V,148S,154K,169F,172F,178T,180D,187D,203R,208G,210S,211I,225S
KU87145403040China2003genomic DNAplasmagenotype: CRF08_BC12315S,6P,14P,15L,41T,71D,83L,87Q,91V,110S,154K,169F,178T,187D,203R,208G,210S,225S
KU87140903043China2003genomic RNAplasmagenotype: CRF01_AE12312M,5D,6A,7R,14P,15V,31G,33N,48P,54M,58M,67L,74D,81E,92P,128D,140I,148V,178T,200S,203R,207S,208G,225S
KU87141003046China2003genomic RNAplasmagenotype: CRF01_AE12316A,14P,15V,31G,33N,54M,58I,92P,120G,128D,148V,178T,200S,203R,207T,208G,225S
KU87147203105China2003genomic DNAplasmagenotype: 070812316L,14P,68I,71D,83L,116A,120S,124V,128D,154K,169F,178T,180D,187D,203R,208G,210S,211I,225S
KU87145504005China2004genomic DNAplasmagenotype: CRF08_BC12316L,14P,15L,41T,71D,83L,87Q,91V,120S,169F,178T,180D,187D,203R,208G,210S,225S
KU87148704015China2004genomic DNAplasmagenotype: C12316L,41T,71D,83L,86I,91V,96L,110S,116A,120A,124V,128D,154K,169F,178T,180D,203R,210S,225S
KU87141104048China2004genomic RNAplasmagenotype: CRF01_AE12316A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
KU87141204055China2004genomic RNAplasmagenotype: CRF01_AE12314E,6G,11I,13P,14P,15L,18K,20F,26I,27I,31G,33N,36I,54M,58I,63P,64G,67P,73L,77T,78S,82K,83G,92P,120S,128D,148I,178T,200S,207S,208G,225S
KU87141304089China2004genomic RNAplasmagenotype: CRF01_AE12316A,14P,31G,33N,54M,58I,92P,128D,178T,187G,200S,207T,208G,225S
KU87145605131China2005genomic DNAplasmagenotype: CRF08_BC12316L,14P,41T,71D,91V,96L,124V,169F,178T,180D,203R,208G,210S,225S
KU87145105132China2005genomic DNAplasmagenotype: CRF07_BC12316L,14P,68I,71D,83L,116A,120G,124V,128D,154K,169F,178T,180D,187D,203R,208G,210S,211I,225S
KU87147305133China2005genomic DNAplasmagenotype: undefined12316L,14P,15L,41T,83L,154K,169F,178T,180D,187D,203R,208G,225S
KU87141405134China2005genomic RNAplasmagenotype: CRF01_AE12316A,14P,15V,31G,33N,54M,58I,83L,92P,120S,128D,148V,154K,178T,187D,191I,200S,207S,208G,225S
KU87145205212China2005genomic DNAplasmagenotype: CRF07_BC12316L,15L,68I,71D,83L,116A,120S,124V,128D,131E,154K,169F,178T,180D,187D,203R,208G,210S,211I,225S
KU87141505240China2005genomic RNAplasmagenotype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
KU87141605257China2005genomic RNAplasmagenotype: CRF01_AE12316A,14P,15V,31G,33N,54M,58I,83I,92P,120S,128D,154K,178T,187D,200S,203R,207T,208G,225S
KU87141705274China2005genomic RNAplasmagenotype: CRF01_AE12316A,14P,15V,31G,33N,54M,58I,92P,96I,128D,148V,178T,184R,187D,200S,207S,208G,225S
KU87141805275China2005genomic RNAplasmagenotype: CRF01_AE12316T,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,187D,200S,207T,208G,225S
KU87141905320China2005genomic RNAplasmagenotype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,83L,92P,120S,128D,148V,178T,200S,207T,208G,225S
KU87142006010China2006genomic RNAplasmagenotype: CRF01_AE12316A,14P,31G,54M,58I,79D,83L,92P,110N,128D,148V,178T,200S,207T,208G,225S
KU87142106011China2006genomic RNAplasmagenotype: CRF01_AE12316A,14P,15V,31G,33N,54M,58I,83L,92P,117G,120S,128D,146R,148V,154K,178T,191I,200S,207S,208G,209V,225S
KU87145706038China2006genomic DNAplasmagenotype: CRF08_BC12316L,14P,41T,71D,83L,91V,124V,154K,169F,178T,180D,187D,203R,210S,225S
KU87142206039China2006genomic RNAplasmagenotype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,64G,92P,96L,128D,148V,178T,198W,200S,203E,207T,208G,225S
KU87142306059China2006genomic RNAplasmagenotype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,71D,92P,120S,128D,148V,149C,183H,191I,200S,207T,208G,225S
KU87145806060China2007genomic DNAplasmagenotype: CRF08_BC12316L,14P,15L,41T,71D,83L,120S,154K,169F,178T,180D,187D,203R,210S,225S
KU87147406145China2006genomic DNAplasmagenotype: undefined12316A,14P,15L,31G,33N,54M,58I,83I,92P,120G,128D,148V,178T,200S,207T,208G
KU87147506146China2006genomic DNAplasmagenotype: undefined12316A,14P,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
KU87142406150China2006genomic RNAplasmagenotype: CRF01_AE12316A,14P,15L,27I,31G,33N,41T,54M,58I,83I,87Q,96I,148V,154K,169F,178T,180D,187D,190I,200S,203R,208G,225S
KU87142506152China2006genomic RNAplasmagenotype: CRF01_AE12316A,14P,31G,33N,54M,58I,78V,83T,92P,128D,148V,178T,183T,200S,207T,208G,225S
KU87142606323China2006genomic RNAplasmagenotype: CRF01_AE12316A,9H,14P,15L,31G,33N,54M,58I,83I,92P,110N,146R,148V,154K,178T,183S,200S,207T,208G,225S
KU87142707020China2007genomic RNAplasmagenotype: CRF01_AE12316A,14S,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
KU87145907033China2007genomic DNAplasmagenotype: CRF08_BC12316L,14P,15L,41T,71D,83L,91V,117G,120S,154K,169F,178T,180D,187D,203R,210S,225S
KU87142807034China2007genomic RNAplasmagenotype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,83L,92P,128D,146R,148V,154K,178T,182R,200S,207T,208G,210S,225S
KU87146007084China2007genomic DNAplasmagenotype: CRF08_BC12316L,14P,41T,71D,83L,86A,87Q,91V,120S,124V,169F,178T,180D,187D,203R,208G,210S,225S
KU87142907085China2007genomic RNAplasmagenotype: CRF01_AE12316A,11T,14S,15L,31G,33N,54M,58I,87Q,92P,96L,128D,148V,154K,178T,200S,207T,208G,225S
KU87147607117China2007genomic DNAplasmagenotype: 65CPX12316L,14P,71D,91V,116A,120S,124V,128D,154K,169F,178T,180D,203R,208G,210S,211I,225S
KU87146107137China2007genomic DNAplasmagenotype: CRF08_BC12316L,14P,15L,41T,71D,83L,91V,120S,169F,178T,180D,187D,203R,208G,225S
KU87143007184China2007genomic RNAplasmagenotype: CRF01_AE12316A,14P,15V,31G,54M,58I,83L,92P,128D,148V,178T,187R,188H,200S,207T,208G,225S
KU87146207201China2007genomic DNAplasmagenotype: CRF08_BC12316L,14P,41T,71D,83L,120S,154K,169F,178T,180D,187D,203R,208G,225S
KU87143107208China2007genomic RNAplasmagenotype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,92P,128D,148V,160S,178T,200S,207T,208G,225S
KU87143208083China2008genomic RNAplasmagenotype: CRF01_AE12316A,11I,14P,15L,31G,33N,54M,58I,92P,120S,148V,178T,200S,207T,208G,209P,225S
KU87143308117China2008genomic RNAplasmagenotype: CRF01_AE12316A,15V,31G,33N,54M,58I,83L,92P,110N,128D,148V,178T,200S,207S,208G,225S
KU87146308132China2008genomic DNAplasmagenotype: CRF08_BC12316L,14P,15L,41T,71D,83L,91V,124V,154K,169F,178T,180D,187D,203R,208G,225S
KU87143408133China2008genomic RNAplasmagenotype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,83L,92P,120G,123S,128D,148V,178T,200S,207T,208G,225S
KU87147708149China2008genomic DNAplasmagenotype: 010712316L,27I,41T,71D,83L,116A,120G,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,211I,225S
KU87143508178China2008genomic RNAplasmagenotype: CRF01_AE12316L,14P,41T,83L,87Q,91V,96I,116A,128D,148V,149G,178T,200S,203R,225S
KU87143608222China2008genomic RNAplasmagenotype: CRF01_AE12316A,14S,15L,31G,33N,48A,54M,58I,86A,92Q,120S,148V,149G,178T,182G,200S,207T,208G,225S
KU87146408238China2008genomic DNAplasmagenotype: CRF08_BC12316L,14P,41T,71D,83L,124V,154K,169F,178T,180D,187D,203R,208G,225S
KU87147808265China2008genomic DNAplasmagenotype: 0708BC12316L,14P,15L,41T,71D,83T,91V,116A,120S,123A,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,211I,225S
KU87143709011China2009genomic RNAplasmagenotype: CRF01_AE12316A,7E,9R,13H,14P,15L,18T,23G,27I,31G,33N,35Q,54M,58I,71D,79D,92P,109T,120S,131N,148V,169L,178T,207T,208G,225S
KU87143809089China2009genomic RNAplasmagenotype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,71D,92P,128D,146R,148V,149G,178T,191I,200S,207Q,208G,225S
KU87146509096China2009genomic DNAplasmagenotype: CRF08_BC12316L,14P,41T,71D,83L,91V,120G,154K,169F,178T,180D,187D,203R,208G,210S,225S
KU87146609106China2009genomic DNAplasmagenotype: CRF08_BC12316L,14P,15L,41T,71D,83L,86P,87Q,91V,120S,154K,169F,178T,180D,187D,207S,208G,225S
KU87147909116China2009genomic DNAplasmagenotype: 57BC12316L,14P,41T,71D,83L,91H,120S,123A,169F,178T,180D,203R,208G,210S,225S
KU87143909129China2009genomic RNAplasmagenotype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,90L,92P,110N,128D,148V,178T,200S,207S,208G,225S
KU87144010017China2010genomic RNAplasmagenotype: CRF01_AE12316A,14P,27I,31G,33N,54M,58I,92P,128D,131N,178T,200S,207T,208G,225S
KU87144110018China2010genomic RNAplasmagenotype: CRF01_AE12316A,14P,31G,33N,54M,58I,79D,92P,128D,148V,149G,178T,200A,203R,207T,208G,225S
KU87144210019China2010genomic RNAplasmagenotype: CRF01_AE12316A,14P,31G,33N,54M,58I,64G,87Q,92P,96L,128D,132M,148V,149G,154K,178T,200S,207Q,208G,225S
KU87146710021China2010genomic DNAplasmagenotype: CRF08_BC12316L,14S,15L,41T,71D,91A,120S,124V,154K,169F,178T,180D,203R,208G,225S
KU87146810022China2010genomic DNAplasmagenotype: CRF08_BC12316L,14P,15L,41T,71D,83L,120S,154K,169F,178T,180D,187D,203R,208G
KU87148010026China2010genomic DNAplasmagenotype: B12316L,14P,41T,83L,91P,120S,154K,180D,230I
KU87144310050China2010genomic RNAplasmagenotype: CRF01_AE12316A,14P,15V,31G,33N,54M,58I,79D,92P,120S,128D,148V,178T,200S,206R,207S,208G,225S
KU87144410062China2010genomic RNAplasmagenotype: CRF01_AE12316A,14P,15V,27I,31G,33N,54M,58I,83T,87Q,92P,96I,116A,128D,148V,178T,200S,203R,225S
KU87144510072China2010genomic RNAplasmagenotype: CRF01_AE12316A,11A,14P,15L,27I,31G,33N,54M,58I,68I,87Q,92P,123S,146R,148V,149G,154K,178T,200S,207T,208G,225S
KU87146910098China2010genomic DNAplasmagenotype: CRF08_BC12316L,14P,15L,41T,71D,83L,87Q,92P,120S,124V,154K,169F,178T,180D,187D,203R,208G,210P
KU87148211015China2011genomic DNAplasmagenotype: 64BC12316L,14P,79D,83L,87Q,120S,180D,225S,230I
KU87144611063China2011genomic RNAplasmagenotype: CRF01_AE12316A,14P,15V,31G,33N,54M,58I,67H,83I,87Q,120T,128D,131N,160S,178T,200S,207R,208G,225S
KU87148111096China2011genomic DNAplasmagenotype: 64BC12316L,14P,71D,83L,86I,116T,120S,124V,128D,136M,154K,169F,178T,180D,187D,225A
KU87144711097China2011genomic RNAplasmagenotype: CRF01_AE12316A,14P,15V,27I,31G,33N,54M,58I,71D,79D,87Q,92P,96L,128D,148V,149G,200S,207T,208G,225S
KU87144811098China2011genomic RNAplasmagenotype: CRF01_AE12316A,14S,15L,31G,33N,54M,58I,92P,96L,106R,110N,120D,148V,149G,154K,178T,182R,200S,207T,208G,225S
KU87148811099China2011genomic DNAplasmagenotype: C12316L,14P,27I,41T,71D,72A,83L,91V,116A,120S,124V,128D,148S,154K,169F,178T,187D,194S,203R,225S
KU87148311100China2011genomic DNAplasmagenotype: B12316L,14P,27I,33N,68I,83L,120S,124V,146R,154K,180D
KU87148411101China2011genomic DNAplasmagenotype: undefined12316A,14P,15L,31G,33N,54M,58I,71D,92P,128D,148V,178T,187Q,200A,203R,208Q,225S
KU87148511103China2011genomic DNAplasmagenotype: undefined12316A,14P,15L,31G,33N,54M,58I,87Q,91F,92P,96L,148V,187A,200S,203E,208Q,210S,225S
KU87144912028China2012genomic RNAplasmagenotype: CRF01_AE12316A,14P,15V,31G,33N,54M,58I,79D,83T,87Q,92P,96I,116A,128D,148V,178T,200S,207T,208G,225S
KU87147012032China2010genomic DNAplasmagenotype: CRF08_BC12316L,14P,41T,71D,83L,91V,120G,154K,169F,178T,180D,203R,208G,210S
KU87145012071China2012genomic DNAplasmagenotype: CRF07_BC12316L,14P,68I,71D,83L,91A,116A,120S,124V,128D,154K,169F,178T,180D,187D,203R,208G,210Q,211I,225S
KU87148612126China2012genomic DNAplasmagenotype: 62BC12316L,14P,16A,41I,71D,83L,91V,110S,116A,120S,124V,128D,132K,135V,154K,169F,171V,178T,180D,187D,191L,208G,225S

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